Analytische Chemie
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Protein folding, unfolding and misfolding have become critically important to a range of health and industry applications. Increasing high temperature and high pressure are used to control and speed up reactions. A number of studies have indicated that these parameters can have a large effecton protein structure and function. Here we describe the additive effects of these parameters on the small angle scattering behaviour of ribonuclease A. We find that alternate unfolded structures can be obtained with combined high pressure and temperature treatment of the protein.
Data analysis of SAS measurements has been dominated by the classical curve fitting approach. This method finds optimal parameters of a scattering model composed of analytical expressions. SASfit represents such a classical curve fitting toolbox: it is one of the mature programs for small-angle scattering data analysis and has been available and used for many years. The latest developments [1] will be extended by improving the interoperability of the extensive data base of models with third-party analysis software. An updated format of model definitions is also presented, which allows model function plug-ins to be used with the Python language.
To complement the classical curve fitting method, the user-friendly opensource Monte Carlo regression package McSAS was developed. Most importantly, the form-free Monte Carlo approach of McSAS means that it is not necessary to provide any further mathematical restrictions to the Parameter distribution. Future developments include separating the core optimization from the GUI (allowing 'headless' integration), as well as parallel computing which reduces the computing time proportional to the number of available computing cores. The headless mode is presented by an example of Operation within interactive programming environments such as a Jupyter notebook.
The promising results of Monte Carlo based data analysis for determining form-free Parameter distributions motivated the evaluation of the method with dynamic light scattering (DLS) data. For this purpose, the method was adapted for analyzing correlation curves such as those from multi-angle dynamic light scattering (DLS) data. The development of McDLS intends to overcome limitations of existing methods at reliably determining the modality of size distributions. An example of Monte Carlo based data analysis of multimodal DLS measurements will be presented.
Eleventh canSAS Meeting: International Cooperation and Collaboration in Small-Angle Scattering
(2019)
The eleventh canSAS workshop was held in Freising, Germany, July 8–10, 2019.
These international meetings, promoting collective action for nomadic small-angle scatterers, have been taking place since 1998 and act as forums to catalyze cooperation amongst the SAS community in order to provide better facilities and equipment, combined with reliable data interpretation and analysis. The meeting attracted over 60 participants from major neutron and X-ray laboratories, as well as manufacturers of SAXS equipment, and users from academia and industry. There was also a wide geographical spread with participants from Australia, Asia, and North America joining European colleagues.
Ordered mesoporous silica materials such as COK-12, analogous to the well-known SBA-15, are characterized by high surface areas and unique features such as defined pore sizes in the meso-size range and high pore ordering.
The aim of this work was to prove the washing step and choice of calcination and aging temperature during the COK-12 synthesis as effective tools in tailoring, markedly improving the specific surface area, pore size, and pore volume. By controlling the aging temperature, the pore size was linearly adjusted between 5.7 and 8.1 nm, while preserving the hexagonal ordering of the pores. The synthesized COK-12 powders possess pore volumes and specific surface areas up to 1.23 cm3 g−1 and 860m2 g−1, respectively, which is markedly higher than what has previously been reported about COK-12. The presented results and the environmentally friendly character of the synthesis will make COK-12 more interesting for future adaption to the industrial processes, for example in catalysis, adsorption, or drug delivery.
After a colleague sent me a more useful measurement from a laboratory instrument than what I could get from the beamline, I knew it was time to reassess my life's choices. Over the course of several subsequent post-doc and permanent positions around lab instruments, I managed to refine a flexible, comprehensive methodology for data collection, correction and analysis which can be applied to many X-ray scattering investigations at the lab and at the synchrotron. With the help of friends at round places, this methodology was implemented and put into production, and has been delivering high-quality data since then. Now, we have almost all possible data corrections (for X-ray scattering) implemented, and are improving the hardware to deliver higher-quality metadata to enable the corrections to be performed to a higher accuracy.
Simultaneously, we have set up a mini-large facility at BAM with the MAUS, the Multi-scale Analyzer for Ultrafine Structures. The MAUS combines the freedom of a laboratory instrument, with the spectrum of users of a beamline: besides measuring our own samples, and performing our own machine and methodology developments, we have opened this instrument for collaboration with fellow scientists from within BAM and from external institutes and universities. Here, we provide a comprehensive support for these collaborations, guiding the user from concept to sample selection, to interpretation and analysis. In 2019, we have supported over 30 different projects this way, leading to seven co-authored publications involving the MAUS in that year alone. As the MAUS uses the latest iteration of our comprehensive measurement methodology, the data quality is unmatched by any other lab instrument, and fully traceable to boot.
The freedom of the laboratory allows for more proof-of-principle experimentation than what is possible at the synchrotron. Therefore, the MAUS provides a good first (and sometimes final) step towards many experimental materials science investigations, nicely complementing the capabilities of the synchrotron. If and when more flux is needed, the step to the synchrotron is now smaller than ever, in particular with the same method
X-ray generation
(2020)
Recorded at the Better with Scattering workshop 2020, this talk highlights the complete set of data correction steps that we do for the MAUS, and how they can be used elsewhere too. This links well with the talk in this series by Dr. Tim Snow, and also highlights the details of the background subtraction that needs to be done.
The SPONGE
(2020)