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- Click chemistry (2) (entfernen)
Today, 40 % of the world’s population live in areas with a significant risk of dengue infection. Early and reliable diagnosis of dengue virus (DENV) is essential to provide the patients with the required medical care and prevent spreading of the disease. Conventional methods for DENV diagnosis like PCR and virus isolation can be used in laboratory settings, yet are difficult to implement in point-of-care diagnostics, requiring simple, selective, fast, and sensitive detection schemes. We present here a novel approach for the detection of DENV, via its RNA, with optical read-out that relies on RNA-catalyzed fluorophore transfer onto a semiconductor quantum dot (QD) and Förster resonance energy transfer (FRET).
For this RNA assay, peptide nucleic acid (PNA) oligomers were used as highly specific capture and reporter probes. PNA exhibits remarkable affinity towards RNA as well as extremely high chemical and enzymatic stability. The capture probe, which is immobilized on a QD acting as FRET donor, bears a nucleophile at the N-terminus and the reporter probe is modified with an organic dye acting as FRET acceptor. The presence of DENV genomic RNA in the sample triggers a transfer of the dye onto the QD, signaled by FRET between the QD and the dye. A unique advantage of this system is the ability of one RNA molecule to trigger multiple transfer reactions, thereby amplifying the fluorescence signal. This assay together with the exceptional brightness of QDs and outstanding hybridization properties of PNA allows for highly specific and sensitive detection of DENV RNA in the sub-nM range.
Currently research in chemical manufacturing moves towards flexible plug-and-play approaches focusing on modular plants, capable of producing small scales on-demand with short down-times between individual campaigns. This approach allows for efficient use of hardware, a faster optimization of the process conditions, and thus, an accelerated introduction of new products to the market [1]. Driven mostly by the search for chemical syntheses under biocompatible conditions, so-called “click” chemistry rapidly became a growing field of research. The resulting simple one-pot reactions are so far only scarcely accompanied by an adequate optimization via comparably straightforward and robust analysis techniques. Here we report on a fast and reliable calibration-free online high field NMR monitoring approach for technical mixtures. It combines a versatile fluidic system, continuous-flow measurement with a time interval of 20 s per spectrum, and a robust, automated algo-rithm to interpret the obtained data. All spectra were acquired using a 500 MHz NMR spectrometer (Varian) with a dual band flow probe having a 1/16 inch polymer tubing working as a flow cell. Single scan 1H spectra were recorded with an acquisition time of 5 s, relaxation delay of 15 s.