Filtern
Erscheinungsjahr
- 2017 (8) (entfernen)
Dokumenttyp
- Posterpräsentation (4)
- Vortrag (2)
- Zeitschriftenartikel (1)
- Beitrag zu einem Tagungsband (1)
Sprache
- Englisch (8)
Schlagworte
- Melanin (3)
- Back yest (1)
- Black yeast (1)
- Carotenoids (1)
- Cell wall (1)
- EPS (1)
- Flux balance analysis (1)
- Halomonas elongata (1)
- Knufia (1)
- Knufia petricola (1)
Eingeladener Vortrag
- nein (2)
Halophilic bacteria use a variety of osmoregulatory methods, such as the accumulation of one or more compatible solutes. The wide diversity of compounds that can act as compatible solute complicates the task of understanding the different strategies that halophilic bacteria use to cope with salt. This is specially challenging when attempting to go beyond the pathway that produces a certain compatible solute towards an understanding of how the metabolic network as a whole addresses the problem. Metabolic reconstruction based on genomic data together with Flux Balance Analysis (FBA) is a promising tool to gain insight into this problem. However, as more of these reconstructions become available, it becomes clear that processes predicted by genome annotation may not reflect the processes that are active in vivo. As a case in point, E. coli is unable to grow aerobically on citrate in spite of having all the necessary genes to do it. It has also been shown that the realization of this genetic potential into an actual capability to metabolize citrate is an extremely unlikely event under normal evolutionary conditions. Moreover, many marine bacteria seem to have the same pathways to metabolize glucose but each species uses a different one. In this work, a metabolic network inferred from genomic annotation of the halophilic bacterium Halomonas elongata and proteomic profiling experiments are used as a starting point to motivate targeted experiments in order to find out some of the defining features of the osmoregulatory strategies of this bacterium. This new information is then used to refine the network in order to describe the actual capabilities of H. elongata, rather than its genetic potential.
Genetics for geomycology
(2017)
Black microcolonial fungi (MCF) are persistent inhabitants of rock surfaces. Biofilm establishment and more importantly, quantification of its geological input are so far only possible to be studied in simplified, well-controlled laboratory experiments. Therefore, the ability of MCF to cope with multiple, rapidly fluctuating stresses makes the group an interesting subject in the study of stress resistance but also in mineral weathering processes. We studied the role of protective pigments in stress resistance and mineral weathering of the rock-inhabiting fungus Knufia petricola (Chaetothyriales) strain A95.
Fungal melanins are distinctive markers of rock-inhabiting ascomycetes. These complex polyphenols play important roles in stress tolerance while being essential components of fungal cell walls and useful biomarkers. Here we report signatures of melanins and carotenoids in pigment mutant strains of the black yeast Knufia petricola A95 using Raman spectroscopy
Mediaeval stained glass has been treated with Polymethylmetacrylate coatings by Kwiatkowski in Poland during the 1950th. Such treated panels were found in the Johannis Church of Toruń (without protective glazing), in the Cathedral of Włocławek (behind a protective glazing), and on glass kept in exhibition cases in the museum of Toruń. Surface coatings have been detected and analyzed. There was no extensive contamination by fungi or bacteria if the glass was either coated or not.
Black ascomycetous microcolonial fungi (MCF) are persistent inhabitants of rock surfaces in deserts as well as ubiquitous in other wide-spread terrestrial ecosystems including man-made materials such as solar panels. The ability of MCF to cope with multiple, rapidly fluctuating stresses makes the group an interesting subject in the study of stress resistance. Carotenoids and melanin are amongst the protective pigments that contribute to the robustness of MCF. We studied their role in stress resistance of the non-pathogenic rock-inhabiting fungus Knufia petricola (Chaetothyriales) strain A95. Disruption of melanin synthesis affects not only oxidative-stress resistance but also the extracellular polysaccharide (EPS) matrix and lipid composition of the cell membrane.
Black ascomycetous microcolonial fungi (MCF) are persistent inhabitants of rock surfaces in deserts as well as ubiquitous in other wide-spread terrestrial ecosystems including man-made materials such as solar panels. The ability of MCF to cope with multiple, rapidly fluctuating stresses makes the group an interesting subject in the study of stress resistance. Carotenoids and melanin are amongst the protective pigments that contribute to the robustness of MCF. We studied their role in stress resistance of the non-pathogenic rock-inhabiting fungus Knufia petricola (Chaetothyriales) strain A95. Disruption of melanin synthesis affects not only oxidative-stress resistance but also the extracellular polysaccharide (EPS) matrix and lipid composition of the cell membrane.
Soil formation on rock surfaces is intrinsically coupled to primary microbial colonisation of the atmosphere-lithosphere interface. Rock-inhabiting microbial life is ubiquitous but the mechanisms of biofilm establishment and more importantly, quantification of its geological input are so far only possible to be studied in simplified, well-controlled laboratory experiments. In a previous study [1] a laboratory biofilm consisting of the phototrophic cyanobacterium Nostoc punctiforme ATCC 29133 and the rock-inhabiting ascomycete Knufia petricola A95 was tested for its mineral weathering potential. Mineral dissolution was enhanced in biotic experiments as compared to abiotic ones. Here the influence of K. petricola strain A95 and a recently constructed melanin deficient mutant (A95ΔPKS) were used to study the influence of fungal pigments on weathering of forsteritic olivine. The olivine with fungal biomass was submerged in a nutrient solution (pH 6.2) in batch-reactor flasks that were incubated for 90 d at 25°C and 90 μmol photons.m2.sec-1, while shaken at 150 rpm. qPCR was used to quantify the growth of fungi. Mineral dissolution was quantified by ICP-OES analysis of the liquid medium while SEM-EDX analysis of the solid phase was used to determine secondary mineral formation and visualise growth behaviour. Wild type and mutant accelerated dissolution of the mineral: over time both release more Mg and Si from olivine than the abiotic control. Also SEM revealed a closer physical contact of the wild type cells to the mineral and a higher production of EPS of the melanin mutant A95ΔPKS. This important difference in the ability of the wild type strain to adhere to the mineral surface might be crucial in maintaining a biologically modified environment. This biologically engineered habitat serves as a place where mineral dissolution as well as deposition of metabolic products (EPS + pigments) can impact the rock surface. We expect this study to increase the awareness on the impact of microbiology, and more specifically, rock-inhabiting fungi on mineral weathering. [1] Seiffert, F., Bouchez, J., von Blanckenburg, F., and Gorbushina, A. A. (2014). Microbial colonization of bare rocks: laboratory biofilm enhances mineral weathering. Proc. Earth Plan. Sci. 12,123–129.doi: 10.1016/j.proeps.2014.08.042