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Long-lived flow patterns in the atmosphere such as weather fronts, mid-latitude blockings or tropical cyclones often induce extreme weather conditions. As a consequence, their description, detection, and tracking has received increasing attention in recent years. Similar objectives also arise in diverse fields such as turbulence and combustion research, image analysis, and medical diagnostics under the headlines of "feature tracking", "coherent structure detection" or "image registration" - to name just a few. A host of different approaches to addressing the underlying, often very similar, tasks have been developed and successfully used. Here, several typical examples of such approaches are summarized, further developed and applied to meteorological data sets. Common abstract operational steps form the basis for a unifying framework for the specification of "persistent structures" involving the definition of the physical state of a system, the features of interest, and means of measuring their persistence.
Scientific visualization is a rapidly growing research field with a need for information dissemination. This report describes the Electronic Visualization Library (EVlib), a digital library for scientific visualization. Main design goals of EVlib were an attractive user interface providing various kind of access mechanisms as well as an open interface to other already established information systems. EVlib stores fulltext versions of documents where they are available. We also provide access to BibTeX entries for every stored document. All available BibTeX entries are combined in BibTeX bibliographies which are registered with the ``Collection of Computer Science Bibliographies'' at University of Karlsruhe. Additionally, we have defined a mapping from BibTeX attributes to the Dublin Core attribute set. This mapping is used to provide a gatherer interface for the Harvest information system. This way, existing Harvest installations can immediately use EVlib as an information resource.
Dieser Report beschreibt ein Konzept zur einheitlichen Bereitstellung von Software in heterogenen Umgebungen. Software kann so kooperativ durch mehrere Beteiligten (z. B. auch über Institutsgrenzen hinweg) angeboten und genutzt werden. Die Konzepte stammen ursprünglich vom Rechenzentrum der Universität Stuttgart (RUS) und wurden im Rahmen eines vom Verein zur Förderung eines Deutschen Forschungsnetzes (DFN) mit Mitteln des BMBF geförderten Projekts zur Berliner Software Distribution (BeSD) weiterentwickelt.
A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics
(2012)
Stimulation of renal collecting duct principal cells with antidiuretic hormone (arginine-vasopressin, AVP) results in inhibition of the small GTPase RhoA and the enrichment of the water channel aquaporin-2 (AQP2) in the plasma membrane. The membrane insertion facilitates water reabsorption from primary urine and fine-tuning of body water homeostasis. Rho guanine nucleotide exchange factors (GEFs) interact with RhoA, catalyze the exchange of GDP for GTP and thereby activate the GTPase. However, GEFs involved in the control of AQP2 in renal principal cells are unknown. The A-kinase anchoring protein, AKAP-Lbc, possesses GEF activity, specifically activates RhoA, and is expressed in primary renal inner medullary collecting duct principal (IMCD) cells. Through screening of 18,431 small molecules and synthesis of a focused library around one of the hits, we identified an inhibitor of the interaction of AKAP-Lbc and RhoA. This molecule, Scaff10-8, bound to RhoA, inhibited the AKAP-Lbc-mediated RhoA activation but did not interfere with RhoA activation through other GEFs or activities of other members of the Rho family of small GTPases, Rac1 and Cdc42. Scaff10-8 promoted the redistribution of AQP2 from intracellular vesicles to the periphery of IMCD cells. Thus, our data demonstrate an involvement of AKAP-Lbc-mediated RhoA activation in the control of AQP2 trafficking.