Adaptive hierarchical cluster analysis by Self-Organizing Box Maps
Please always quote using this URN: urn:nbn:de:0297-zib-5815
- The present paper aims at an extension of {\sc Kohonen's} Self-Organizing Map (SOM) algorithm to be called Self-Organizing Box Map (SOBM) algorithm; it generates box codebooks in lieu of point codebooks. Box codebooks just like point codebooks indirectly define a Voronoi tessellation of the input space, so that each codebook vector represents a unique set of points. Each box codebook vector comprises a multi-dimensional interval that approximates the related partition of the Voronoi tessellation. Upon using the automated cluster identification method that has recently been developed by the authors, the codebook vectors can be grouped in such a way that each group represents a point cluster in the input space. Since the clustering usually depends on the size of the SOM, one cannot be sure, whether the clustering comes out to be optimal. Refinement of part of the identified clusters would often improve the results. This paper presents the concept of an adaptive multilevel cluster algorithm that performs such refinements automatically. Moreover the paper introduces a concept of essential dimensions and suggests a method for their identification based on our herein suggested box codebooks. Applications of the algorithm to molecular dynamics will be described in a forthcoming paper.
Author: | Tobias Galliat, Peter Deuflhard |
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Document Type: | ZIB-Report |
Tag: | Self-Organizing Maps; Voronoi tessellation; cluster analysis; essential dimensions; feature extraction; multilevel methods |
MSC-Classification: | 62-XX STATISTICS / 62Hxx Multivariate analysis [See also 60Exx] / 62H30 Classification and discrimination; cluster analysis [See also 68T10] |
68-XX COMPUTER SCIENCE (For papers involving machine computations and programs in a specific mathematical area, see Section -04 in that area) / 68Txx Artificial intelligence / 68T05 Learning and adaptive systems [See also 68Q32, 91E40] | |
Date of first Publication: | 2000/04/18 |
Series (Serial Number): | ZIB-Report (00-13) |
ZIB-Reportnumber: | 00-13 |