TY - GEN A1 - Vu, Thi Huong A1 - Koch, Thorsten A1 - Xu, Hong-Kun T1 - The gradient projection method: Is the Polyak adaptive stepsize rule optimal? N2 - Not always! This is our answer to the question of whether the Polyak adaptive stepsize rule in the gradient projection method is optimal. The answer is based on revisiting the subgradient projection method by Polyak [USSR Computational Mathematics and Mathematical Physics 9 (1969)] for smooth and convex minimization problems where the objective function possesses a geometric property called flatness. Our results show that the method can be more flexible (the effective range for the parameter controlling the stepsize can be wider) and have sharper convergence rates. Applications to split feasibility/equality problems are presented, deriving for the first time the O(1/k) rate of convergence for the adaptive CQ method. A theoretical guarantee of the linear convergence of the gradient descent method with adaptive stepsizes for Google PageRank is provided. At the same time, numerical experiments are designed to spot the ``optimal" stepsize and to compare with other basic gradient methods. Y1 - 2024 ER - TY - CHAP A1 - Yueksel Erguen, Inci A1 - Litzel, Ida A1 - Peng, Hanqiu T1 - Integrating Large Citation Datasets T2 - Operations Research Proceedings 2024. OR 2024 N2 - This paper explores methods for building a comprehensive citation graph using big data techniques to evaluate scientific impact more accurately. Traditional citation metrics have limitations, and this work investigates merging large citation datasets to create a more accurate picture. Challenges of big data, like inconsistent data formats and lack of unique identifiers, are addressed through deduplication efforts, resulting in a streamlined and reliable merged dataset with over 119 million records and 1.4 billion citations. We demonstrate that merging large citation datasets builds a more accurate citation graph facilitating a more robust evaluation of scientific impact. Y1 - 2025 U6 - https://doi.org/10.1007/978-3-031-92575-7_7 SP - 46 EP - 52 ER - TY - GEN A1 - Vu, Thi Huong A1 - Litzel, Ida A1 - Koch, Thorsten T1 - Similarity-based fuzzy clustering scientific articles: potentials and challenges from mathematical and computational perspectives N2 - Fuzzy clustering, which allows an article to belong to multiple clusters with soft membership degrees, plays a vital role in analyzing publication data. This problem can be formulated as a constrained optimization model, where the goal is to minimize the discrepancy between the similarity observed from data and the similarity derived from a predicted distribution. While this approach benefits from leveraging state-of-the-art optimization algorithms, tailoring them to work with real, massive databases like OpenAlex or Web of Science -- containing about 70 million articles and a billion citations -- poses significant challenges. We analyze potentials and challenges of the approach from both mathematical and computational perspectives. Among other things, second-order optimality conditions are established, providing new theoretical insights, and practical solution methods are proposed by exploiting the problem’s structure. Specifically, we accelerate the gradient projection method using GPU-based parallel computing to efficiently handle large-scale data. T3 - ZIB-Report - 25-09 KW - bibliometrics KW - fuzzy clustering KW - large-scale publication data KW - non-convex optimization KW - second-order optimality KW - gradient projection methods KW - Nesterov acceleration KW - GPU-based parallel computing Y1 - 2025 UR - https://opus4.kobv.de/opus4-zib/frontdoor/index/index/docId/10036 ER - TY - GEN A1 - Vu, Thi Huong A1 - Koch, Thorsten T1 - Clustering scientific publications: lessons learned through experiments with a real citation network N2 - Clustering scientific publications helps uncover research structures within bibliographic databases. Graph-based methods such as spectral, Louvain, and Leiden clustering are commonly used due to their ability to model citation networks. However, their effectiveness can diminish when applied to real-world data. This study evaluates these clustering algorithms on a citation graph of about 700,000 articles and 4.6 million citations from the Web of Science. The results show that while scalable methods like Louvain and Leiden perform efficiently, their default settings often yield poor partitioning. Meaningful outcomes require careful parameter tuning, especially for large networks with uneven structures, including a dense core and loosely connected papers. These findings highlight practical lessons about the challenges of large-scale data, method selection and tuning based on specific structures of bibliometric clustering tasks. T3 - ZIB-Report - 25-05 KW - graph clustering KW - citation networks KW - Web of Science KW - bibliometric analysis KW - unsupervised learning Y1 - 2025 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-100418 ER - TY - JOUR A1 - Rong, Guoyang A1 - Chen, Ying A1 - Ma, Feicheng A1 - Koch, Thorsten T1 - Exploring Interdisciplinary Research Trends through Critical Years for Interdisciplinary Citation JF - Journal of Informetrics Y1 - 2025 U6 - https://doi.org/10.1016/j.joi.2025.101726 VL - 19 IS - 4 ER - TY - CHAP A1 - Stompor, Tomasz A1 - Zittel, Janina A1 - Koch, Thorsten A1 - Rusch, Beate T1 - Fully Algorithmic Librarian: Large-Scale Citation Experiments T2 - 20th International Society of Scientometrics and Informetrics Conference 2025, June 23-27, 2025 | Yerevan, Armenia N2 - The Fully Algorithmic Librarian (FAN) project explores application scenarios for algorithmic-intelligence(AI)-supported methods in academic libraries as central institutions for research support. To this end, the study builds on two algorithmic approaches for analyzing large-scale citation networks. A comparison of Web of Science (WoS) and OpenAlex structures using the PageRank algorithm reveals key differences. Additionally, a multi-label clustering technique designed for large-scale citation networks accounts for disciplinary variations in publication practices. Y1 - 2025 U6 - https://doi.org/10.51408/issi2025_204 ER - TY - CHAP A1 - Kunt, Tim A1 - Buchholz, Annika A1 - Khebouri, Imene A1 - Koch, Thorsten A1 - Litzel, Ida A1 - Vu, Thi Huong T1 - Mapping the Web of Science, a large-scale graph and text-based dataset with LLM embeddings T2 - Operations Research Proceedings 2025. OR 2025 N2 - Large text data sets, such as publications, websites, and other text-based media, inherit two distinct types of features: (1) the text itself, its information conveyed through semantics, and (2) its relationship to other texts through links, references, or shared attributes. While the latter can be described as a graph structure and can be handled by a range of established algorithms for classification and prediction, the former has recently gained new potential through the use of LLM embedding models. Demonstrating these possibilities and their practicability, we investigate the Web of Science dataset, containing ~56 million scientific publications through the lens of our proposed embedding method, revealing a self-structured landscape of texts. T3 - ZIB-Report - 25-11 Y1 - 2025 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-100646 SN - 1438-0064 ER -