TY - JOUR A1 - Oeltze, Steffen A1 - Lehmann, Dirk J. A1 - Kuhn, Alexander A1 - Janiga, Gábor A1 - Theisel, Holger A1 - Preim, Bernhard T1 - Blood Flow Clustering and Applications in Virtual Stenting of Intracranial Aneurysms JF - IEEE Transactions on Visualization and Computer Graphics, 2014 Y1 - 2013 U6 - https://doi.org/10.1109/TVCG.2013.2297914 SN - 0934-5892 VL - 20 IS - 5 SP - 686 EP - 701 ER - TY - CHAP A1 - Ramm, Heiko A1 - Victoria Morillo, Oscar Salvador A1 - Todt, Ingo A1 - Schirmacher, Hartmut A1 - Ernst, Arneborg A1 - Zachow, Stefan A1 - Lamecker, Hans ED - Freysinger, Wolfgang T1 - Visual Support for Positioning Hearing Implants T2 - Proceedings of the 12th annual meeting of the CURAC society Y1 - 2013 SP - 116 EP - 120 ER - TY - JOUR A1 - Kainmüller, Dagmar A1 - Lamecker, Hans A1 - Heller, Markus O. A1 - Weber, Britta A1 - Hege, Hans-Christian A1 - Zachow, Stefan T1 - Omnidirectional Displacements for Deformable Surfaces JF - Medical Image Analysis Y1 - 2013 U6 - https://doi.org/10.1016/j.media.2012.11.006 VL - 17 IS - 4 SP - 429 EP - 441 PB - Elsevier ER - TY - GEN A1 - Reininghaus, Jan A1 - Günther, David A1 - Hotz, Ingrid A1 - Weinkauf, Tino A1 - Seidel, Hans Peter T1 - Combinatorial Gradient Fields for 2D Images with Empirically Convergent Separatrices Y1 - 2012 UR - http://arxiv.org/abs/1208.6523 ER - TY - CHAP A1 - Kasten, Jens A1 - Zoufahl, Andre A1 - Hege, Hans-Christian A1 - Hotz, Ingrid T1 - Analysis of Vortex Merge Graphs T2 - VMV 2012: Vision, Modeling and Visualization Y1 - 2012 U6 - https://doi.org/10.2312/PE/VMV/VMV12/111-118 SP - 111 EP - 118 PB - Eurographics Association ER - TY - JOUR A1 - Günther, David A1 - Reininghaus, Jan A1 - Wagner, Hubert A1 - Hotz, Ingrid T1 - Efficient Computation of 3D Morse-Smale Complexes and Persistent Homology using Discrete Morse Theory JF - The Visual Computer Y1 - 2012 U6 - https://doi.org/10.1007/s00371-012-0726-8 VL - 28 IS - 10 SP - 959 EP - 969 ER - TY - CHAP A1 - Kasten, Jens A1 - Hotz, Ingrid A1 - Noack, Bernd A1 - Hege, Hans-Christian T1 - Vortex Merge Graphs in Two-dimensional Unsteady Flow Fields T2 - EuroVis – Short Papers Y1 - 2012 UR - http://diglib.eg.org/EG/DL/PE/EuroVisShort/EuroVisShort2012/001-005.pdf U6 - https://doi.org/10.2312/PE/EuroVisShort/EuroVisShort2012/001-005 SP - 1 EP - 5 PB - Eurographics Association CY - Vienna, Austria ER - TY - GEN A1 - Reininghaus, Jan A1 - Hotz, Ingrid ED - Peikert, Ronald ED - Carr, Hamish ED - Hauser, Helwig T1 - Computational Discrete Morse Theory for Divergence-Free 2D Vector Fields T2 - Topological Methods in Data Analysis and Visualization. Theory, Algorithms, and Applications. (TopoInVis 2011) Y1 - 2012 SP - 3 EP - 14 PB - Springer ER - TY - JOUR A1 - Reininghaus, Jan A1 - Kasten, Jens A1 - Weinkauf, Tino A1 - Hotz, Ingrid T1 - Efficient Computation of Combinatorial Feature Flow Fields JF - Transactions on Visualization and Computer Graphics Y1 - 2012 U6 - https://doi.org/10.1109/TVCG.2011.269 VL - 18 IS - 9 SP - 1563 EP - 1573 ER - TY - GEN A1 - Krone, Michael A1 - Kozlikova, Barbora A1 - Lindow, Norbert A1 - Baaden, Marc A1 - Baum, Daniel A1 - Parulek, Julius A1 - Hege, Hans-Christian A1 - Viola, Ivan T1 - Visual Analysis of Biomolecular Cavities: State of the Art N2 - In this report we review and structure the branch of molecular visualization that is concerned with the visual analysis of cavities in macromolecular protein structures. First the necessary background, the domain terminology, and the goals of analytical reasoning are introduced. Based on a comprehensive collection of relevant research works, we present a novel classification for cavity detection approaches and structure them into four distinct classes: grid-based, Voronoi-based, surface-based, and probe-based methods. The subclasses are then formed by their combinations. We match these approaches with corresponding visualization technologies starting with direct 3D visualization, followed with non-spatial visualization techniques that for example abstract the interactions between structures into a relational graph, straighten the cavity of interest to see its profile in one view, or aggregate the time sequence into a single contour plot. We also discuss the current state of methods for the visual analysis of cavities in dynamic data such as molecular dynamics simulations. Finally, we give an overview of the most common tools that are actively developed and used in the structural biology and biochemistry research. Our report is concluded by an outlook on future challenges in the field. T3 - ZIB-Report - 16-42 Y1 - 2016 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-60193 SN - 1438-0064 ER -