TY - JOUR A1 - von Lindheim, Johannes A1 - Harikrishnan, Abhishek A1 - Dörffel, Tom A1 - Klein, Rupert A1 - Koltai, Peter A1 - Mikula, Natalia A1 - Müller, Annette A1 - Névir, Peter A1 - Pacey, George A1 - Polzin, Robert A1 - Vercauteren, Nikki T1 - Definition, detection and tracking of persistent structures in atmospheric flows JF - arXiv N2 - Long-lived flow patterns in the atmosphere such as weather fronts, mid-latitude blockings or tropical cyclones often induce extreme weather conditions. As a consequence, their description, detection, and tracking has received increasing attention in recent years. Similar objectives also arise in diverse fields such as turbulence and combustion research, image analysis, and medical diagnostics under the headlines of "feature tracking", "coherent structure detection" or "image registration" - to name just a few. A host of different approaches to addressing the underlying, often very similar, tasks have been developed and successfully used. Here, several typical examples of such approaches are summarized, further developed and applied to meteorological data sets. Common abstract operational steps form the basis for a unifying framework for the specification of "persistent structures" involving the definition of the physical state of a system, the features of interest, and means of measuring their persistence. Y1 - 2021 ER - TY - GEN A1 - Müller, Peter A1 - Decker, Ingmar T1 - The Electronic Visualization Library N2 - Scientific visualization is a rapidly growing research field with a need for information dissemination. This report describes the Electronic Visualization Library (EVlib), a digital library for scientific visualization. Main design goals of EVlib were an attractive user interface providing various kind of access mechanisms as well as an open interface to other already established information systems. EVlib stores fulltext versions of documents where they are available. We also provide access to BibTeX entries for every stored document. All available BibTeX entries are combined in BibTeX bibliographies which are registered with the ``Collection of Computer Science Bibliographies'' at University of Karlsruhe. Additionally, we have defined a mapping from BibTeX attributes to the Dublin Core attribute set. This mapping is used to provide a gatherer interface for the Harvest information system. This way, existing Harvest installations can immediately use EVlib as an information resource. T3 - ZIB-Report - TR-97-09 Y1 - 1997 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-5517 ER - TY - GEN A1 - Müller, Peter T1 - Handbuch der Berliner Software Distribution (BeSD) N2 - Dieser Report beschreibt ein Konzept zur einheitlichen Bereitstellung von Software in heterogenen Umgebungen. Software kann so kooperativ durch mehrere Beteiligten (z. B. auch über Institutsgrenzen hinweg) angeboten und genutzt werden. Die Konzepte stammen ursprünglich vom Rechenzentrum der Universität Stuttgart (RUS) und wurden im Rahmen eines vom Verein zur Förderung eines Deutschen Forschungsnetzes (DFN) mit Mitteln des BMBF geförderten Projekts zur Berliner Software Distribution (BeSD) weiterentwickelt. T3 - ZIB-Report - TR-96-04 Y1 - 1996 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-5339 ER - TY - CHAP A1 - Gesing, Sandra A1 - Kacsuk, Peter A1 - Kozlovszky, Miklos A1 - Birkenheuer, Georg A1 - Blunk, Dirk A1 - Breuers, Sebastian A1 - Brinkmann, Andre A1 - Fels, Gregor A1 - Grunzke, Richard A1 - Herres-Pawlis, Sonja A1 - Krüger, Jens A1 - Packschies, Lars A1 - Müller-Pfefferkorn, Ralph A1 - Schäfer, Patrick A1 - Steinke, Thomas A1 - Szikszay Fabri, Anna A1 - Warzecha, Klaus Dieter A1 - Wewior, Martin A1 - Kohlbacher, Oliver T1 - A Science Gateway for Molecular Simulations T2 - EGI (European Grid Infrastructure) User Forum 2011, Book of Abstracts Y1 - 2011 SP - 94 EP - 95 ER - TY - CHAP A1 - Gesing, Sandra A1 - Grunzke, Richard A1 - Balasko, Akos A1 - Birkenheuer, Georg A1 - Blunk, Dirk A1 - Breuers, Sebastian A1 - Brinkmann, André A1 - Fels, Gregor A1 - Herres-Pawlis, Sonja A1 - Kacsuk, Peter A1 - Kozlovszky, Miklos A1 - Krüger, Jens A1 - Packschies, Lars A1 - Schäfer, Patrick A1 - Schuller, Bernd A1 - Schuster, Johannes A1 - Steinke, Thomas A1 - Szikszay Fabri, Anna A1 - Wewior, Martin A1 - Müller-Pfefferkorn, Ralph A1 - Kohlbacher, Oliver T1 - Granular Security for a Science Gateway in Structural Bioinformatics T2 - Proc. IWSG-Life 2011 Y1 - 2011 ER - TY - CHAP A1 - Gesing, Sandra A1 - Herres-Pawlis, Sonja A1 - Birkenheuer, Georg A1 - Brinkmann, Andre A1 - Grunzke, Richard A1 - Kacsuk, Peter A1 - Kohlbacher, Oliver A1 - Kozlovszky, Miklos A1 - Krüger, Jens A1 - Müller-Pfefferkorn, Ralph A1 - Schäfer, Patrick A1 - Steinke, Thomas T1 - The MoSGrid Community – From National to International Scale T2 - EGI Community Forum 2012 Y1 - 2012 ER - TY - GEN A1 - Deuflhard, Peter A1 - Schütte, Christof A1 - Cordes, Frank A1 - Müller-Kurth, L. T1 - Konformationsdynamik. Mathematischer Entwurf hochspezifischer Biomoleküle Y1 - 1999 PB - In: D. Hömberg (ed.), 8. Veranstaltungsreihe Forschungspolitische Dialoge in Berlin: Angewandte Mathematik - die verborgene Schlüsseltechnologie, 30. April 1999, Konrad-Zuse-Zentrum Berlin, pp. 30-34 ER - TY - JOUR A1 - Gesing, Sandra A1 - Herres-Pawlis, Sonja A1 - Birkenheuer, Georg A1 - Brinkmann, André A1 - Grunzke, Richard A1 - Kacsuk, Peter A1 - Kohlbacher, Oliver A1 - Kozlovszky, Miklos A1 - Krüger, Jens A1 - Müller-Pfefferkorn, Ralph A1 - Schäfer, Patrick A1 - Steinke, Thomas T1 - A Science Gateway Getting Ready for Serving the International Molecular Simulation Community JF - Proceedings of Science Y1 - 2012 UR - http://pos.sissa.it/archive/conferences/162/050/EGICF12-EMITC2_050.pdf VL - PoS(EGICF12-EMITC2)050 ER - TY - JOUR A1 - Gesing, Sandra A1 - Grunzke, Richard A1 - Krüger, Jens A1 - Birkenheuer, Georg A1 - Wewior, Martin A1 - Schäfer, Patrick A1 - Schuller, Bernd A1 - Schuster, Johannes A1 - Herres-Pawlis, Sonja A1 - Breuers, Sebastian A1 - Balasko, Akos A1 - Kozlovszky, Miklos A1 - Szikszay Fabri, Anna A1 - Packschies, Lars A1 - Kacsuk, Peter A1 - Blunk, Dirk A1 - Steinke, Thomas A1 - Brinkmann, André A1 - Fels, Gregor A1 - Müller-Pfefferkorn, Ralph A1 - Jäkel, René A1 - Kohlbacher, Oliver T1 - A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics JF - Journal of Grid Computing Y1 - 2012 ER - TY - JOUR A1 - Decker, Ingmar A1 - Müller, Peter A1 - Limbach, Daniel T1 - VisInfo-Fachinformationsdienst Visualisierung JF - DFN-Mitteilungen Y1 - 1998 VL - Heft 46 SP - 6 EP - 7 ER - TY - JOUR A1 - Schrade, Katharina A1 - Tröger, Jessica A1 - Eldashan, Adeep A1 - Zühlke, Kerstin A1 - Abdul Azees, Kamal R. A1 - Elkins, Jonathan M. A1 - Neuenschwander, Martin A1 - Oder, Andreas A1 - Elkewedi, Mohamed A1 - Jaksch, Sarah A1 - Andrae, Karsten A1 - Li, Jinliang A1 - Fernandes, Jaoa A1 - Müller, Paul Markus A1 - Grunwald, Stephan A1 - Marino, Stephen F. A1 - Vukicevic, Tanja A1 - Eichhorst, Jenny A1 - Wiesner, Burkhard A1 - Weber, Marcus A1 - Kapiloff, Michael A1 - Rocks, Oliver A1 - Daumke, Oliver A1 - Wieland, Thomas A1 - Knapp, Stefan A1 - von Kries, Jens Peter A1 - Klussmann, Enno T1 - An AKAP-Lbc-RhoA interaction inhibitor promotes the translocation of aquaporin-2 to the plasma membrane of renal collecting duct principal cells JF - PLOS ONE N2 - Stimulation of renal collecting duct principal cells with antidiuretic hormone (arginine-vasopressin, AVP) results in inhibition of the small GTPase RhoA and the enrichment of the water channel aquaporin-2 (AQP2) in the plasma membrane. The membrane insertion facilitates water reabsorption from primary urine and fine-tuning of body water homeostasis. Rho guanine nucleotide exchange factors (GEFs) interact with RhoA, catalyze the exchange of GDP for GTP and thereby activate the GTPase. However, GEFs involved in the control of AQP2 in renal principal cells are unknown. The A-kinase anchoring protein, AKAP-Lbc, possesses GEF activity, specifically activates RhoA, and is expressed in primary renal inner medullary collecting duct principal (IMCD) cells. Through screening of 18,431 small molecules and synthesis of a focused library around one of the hits, we identified an inhibitor of the interaction of AKAP-Lbc and RhoA. This molecule, Scaff10-8, bound to RhoA, inhibited the AKAP-Lbc-mediated RhoA activation but did not interfere with RhoA activation through other GEFs or activities of other members of the Rho family of small GTPases, Rac1 and Cdc42. Scaff10-8 promoted the redistribution of AQP2 from intracellular vesicles to the periphery of IMCD cells. Thus, our data demonstrate an involvement of AKAP-Lbc-mediated RhoA activation in the control of AQP2 trafficking. Y1 - 2018 U6 - https://doi.org/10.1371/journal.pone.0191423 VL - 13 IS - 1 SP - e0191423 EP - e0191423 ER - TY - JOUR A1 - Martin, Alex A1 - Müller, J. A1 - Pape, S. A1 - Peter, A. A1 - Pokutta, Sebastian A1 - Winter, T. T1 - Pricing and clearing combinatorial markets with singleton and swap orders JF - Mathematical Methods of Operations Research Y1 - 2017 VL - 85 IS - 2 SP - 155 EP - 177 ER - TY - JOUR A1 - Picht, Thomas A1 - Le Calve, Maxime A1 - Tomasello, Rosario A1 - Fekonja, Lucius A1 - Gholami, Mohammad Fardin A1 - Bruhn, Matthias A1 - Zwick, Carola A1 - Rabe, Jürgen P. A1 - Müller-Birn, Claudia A1 - Vajkoczy, Peter A1 - Sauer, Igor M. A1 - Zachow, Stefan A1 - Nyakatura, John A. A1 - Ribault, Patricia A1 - Pulvermüller, Friedemann T1 - A note on neurosurgical resection and why we need to rethink cutting JF - Neurosurgery Y1 - 2021 U6 - https://doi.org/10.1093/neuros/nyab326 VL - 89 IS - 5 SP - 289 EP - 291 ER -