TY - JOUR A1 - Koch, Thorsten A1 - Martin, Alexander T1 - Solving Steiner tree problems in graphs to optimality JF - Networks Y1 - 1998 UR - http://opus.kobv.de/zib/volltexte/1996/253/ U6 - https://doi.org/10.1002/(SICI)1097-0037(199810)32:3%3C207::AID-NET5%3E3.0.CO;2-O VL - 32 SP - 207 EP - 232 ER - TY - CHAP A1 - Koch, Thorsten A1 - Martin, Alexander A1 - Voß, Stefan ED - Du, D.-Z. ED - Cheng, X. T1 - SteinLib: An Updated Library on Steiner Tree Problems in Graphs T2 - Steiner Trees in Industry Y1 - 2001 U6 - https://doi.org/10.1007/978-1-4613-0255-1_9 SP - 285 EP - 325 PB - Kluwer ER - TY - JOUR A1 - Fiedler, Georg Martin A1 - Leichtle, Alexander Benedikt A1 - Kase, Julia A1 - Baumann, Sven A1 - Ceglarek, Uta A1 - Felix, Klaus A1 - Conrad, Tim A1 - Witzigmann, Helmut A1 - Weimann, Arved A1 - Schütte, Christof A1 - Hauss, Johann A1 - Büchler, Markus A1 - Thiery, Joachim T1 - Serum Peptidome Profiling Revealed Platelet Factor 4 as a Potential Discriminating Peptide Associated With Pancreatic Cancer JF - Clinical Cancer Research Y1 - 2009 UR - http://publications.imp.fu-berlin.de/155/ U6 - https://doi.org/10.1158/1078-0432.CCR-08-2701 VL - 15 IS - 11 SP - 3812 EP - 3819 PB - American Association for Cancer Research, ER - TY - CHAP A1 - Martin, Alexander A1 - Müller, J. A1 - Pokutta, Sebastian T1 - On clearing coupled day-ahead electricity markets T2 - Proceedings of 23rd Australasian Finance and Banking Conference Y1 - 2010 UR - http://papers.ssrn.com/sol3/papers.cfm?abstract_id=1660528 N1 - Additional Note: doi:10.1080/10556788.2013.823544 ER - TY - CHAP A1 - Helmke, H. A1 - Gluchshenko, O. A1 - Martin, Alexander A1 - Peter, A. A1 - Pokutta, Sebastian A1 - Siebert, U. T1 - Optimal Mixed-Mode Runway Scheduling T2 - Proceedings of DACS Y1 - 2011 UR - http://www.box.net/shared/34p1ea2of7exdgq7tlty ER - TY - GEN A1 - Borndörfer, Ralf A1 - Ferreira, Carlos E. A1 - Martin, Alexander T1 - Matrix Decomposition by Branch-and-Cut N2 - In this paper we investigate whether matrices arising from linear or integer programming problems can be decomposed into so-called {\em bordered block diagonal form}. More precisely, given some matrix $A$, we try to assign as many rows as possible to some number of blocks of limited size such that no two rows assigned to different blocks intersect in a common column. Bordered block diagonal form is desirable because it can guide and speed up the solution process for linear and integer programming problems. We show that various matrices from the %LP- and MIP-libraries \Netlib{} and MIPLIB can indeed be decomposed into this form by computing optimal decompositions or decompositions with proven quality. These computations are done with a branch-and-cut algorithm based on polyhedral investigations of the matrix decomposition problem. T3 - ZIB-Report - SC-97-14 Y1 - 1997 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-2839 ER - TY - GEN A1 - Bixby, Robert E. A1 - Martin, Alexander T1 - Parallelizing the Dual Simplex Method N2 - We study the parallelization of the steepest-edge version of the dual simplex algorithm. Three different parallel implementations are examined, each of which is derived from the CPLEX dual simplex implementation. One alternative uses PVM, one general-purpose System V shared-memory constructs, and one the PowerC extension of C on a Silicon Graphics multi-processor. These versions were tested on different parallel platforms, including heterogeneous workstation clusters, Sun S20-502, Silicon Graphics multi-processors, and an IBM SP2. We report on our computational experience. T3 - ZIB-Report - SC-95-45 Y1 - 1996 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-2112 ER - TY - GEN A1 - Dahl, Geir A1 - Martin, Alexander A1 - Stoer, Mechthild T1 - Routing through virtual paths in layered telecommunication networks N2 - We study a network configuration problem in telecommunications where one wants to set up paths in a capacitated network to accommodate given point-to-point traffic demand. The problem is formulated as an integer linear programming model where 0-1 variables represent different paths. An associated integral polytope is studied and different classes of facets are described. These results are used in a cutting plane algorithm. Computational results for some realistic problems are reported. T3 - ZIB-Report - SC-95-41 Y1 - 1995 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-2070 ER - TY - GEN A1 - Koch, Thorsten A1 - Martin, Alexander T1 - Solving Steiner Tree Problems in Graphs to Optimality N2 - In this paper we present the implementation of a branch-and-cut algorithm for solving Steiner tree problems in graphs. Our algorithm is based on an integer programming formulation for directed graphs and comprises preprocessing, separation algorithms and primal heuristics. We are able to solve all problem instances discussed in literature to optimality, including one to our knowledge not yet solved problem. We also report on our computational experiences with some very large Steiner tree problems arising from the design of electronic circuits. All test problems are gathered in a newly introduced library called {\em SteinLib} that is accessible via World Wide Web. T3 - ZIB-Report - SC-96-42 Y1 - 1996 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-2526 ER - TY - GEN A1 - Martin, Alexander A1 - Weismantel, Robert T1 - Packing Paths and Steiner Trees: Routing of Electronic Circuits. N2 - One of the challenging problems in the design of electronic circuits is the so-called routing problem. Roughly speaking, the task is to connect so-called terminal sets via wires on a predefined area. In addition, certain design rules are to be taken into account and an objective function such as the wiring length must be minimized. The routing problem in general is too complex to be solved in one step. Depending on the user's choice of decomposing the chip design problem into a hierarchy of stages, on the underlying technology, and on the given design rules, various subproblems arise. We discuss several variants of practically relevant routing problems and give a short overview on the underlying technologies and design rules. Many of the routing problems that come up this way can be formulated as the problem of packing so-called Steiner trees in certain graphs. We consider the Steiner tree packing problem from a polyhedral point of view and present three possibilities to define an appropriate polyhedron. Weighing their pros and cons we decide for one of these polytopes and sketch some of our investigations. T3 - ZIB-Report - SC-93-15 Y1 - 1993 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-1113 ER - TY - GEN A1 - Ferreira, Carlos E. A1 - Martin, Alexander A1 - Souza, Cid C. de A1 - Weismantel, Robert A1 - Wolsey, Laurence T1 - Formulations and Valid Inequalities for the Node Capacitated Graph Partitioning Problem. N2 - We investigate the problem of partitioning the nodes of a graph under capacity restriction on the sum of the node weights in each subset of the partition. The objective is to minimize the sum of the costs of the edges between the subsets of the partition. This problem has a variety of applications, for instance in the design of electronic circuits and devices. We present alternative integer programming formulations for this problem and discuss the links between these formulations. Having chosen to work in the space of edges of the multicut, we investigate the convex hull of incidence vectors of feasible multicuts. In particular, several classes of inequalities are introduced, and their strength and robustness are analyzed as various problem parameters change. T3 - ZIB-Report - SC-94-16 Y1 - 1994 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-1450 ER - TY - GEN A1 - Ferreira, Carlos E. A1 - Martin, Alexander A1 - Souza, Cid C. de A1 - Weismantel, Robert A1 - Wolsey, Laurence T1 - The Node Capacitated Graph Partitioning Problem: A Computational Study. N2 - In this paper we consider the problem of $k$-partitioning the nodes of a graph with capacity restrictions on the sum of the node weights in each subset of the partition, and the objective of minimizing the sum of the costs of the edges between the subsets of the partition. Based on a study of valid inequalities, we present a variety of separation heuristics for so-called cycle, cycle with ears, knapsack tree and path-block-cycle inequalities. The separation heuristics, plus primal heuristics, have been implemented in a branch-and-cut routine using a formulation including the edges with nonzero costs and node variables. Results are presented for three classes of problems: equipartitioning problems arising in finite element methods and partitioning problems associated with electronic circuit layout and compiler design. T3 - ZIB-Report - SC-94-17 Y1 - 1994 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-1469 ER - TY - GEN A1 - Weismantel, Robert A1 - Ferreira, Carlos E. A1 - Martin, Alexander T1 - A Cutting Plane Based Algorithm for the Multiple Knapsack Problem. N2 - In this paper we describe a cutting plane based algorithm for the multiple knapsack problem. We use our algorithm to solve some practical problem instances arising in the layout of electronic circuits and in the design of main frame computers, and we report on our computational experience. This includes a discussion and evaluation of separation algorithms, an LP-based primal heuristic and some implementation details. The paper is based on the polyhedral theory for the multiple knapsack polytope developed in our companion paper SC 93-04 and meant to turn this theory into an algorithmic tool for the solution of practical problems. T3 - ZIB-Report - SC-93-07 Y1 - 1993 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-1031 ER -