TY - JOUR A1 - Rehfeldt, Daniel A1 - Koch, Thorsten A1 - Maher, Stephen J. T1 - Reduction Techniques for the Prize-Collecting Steiner Tree Problem and the Maximum-Weight Connected Subgraph Problem JF - Networks N2 - The concept of reduction has frequently distinguished itself as a pivotal ingredient of exact solving approaches for the Steiner tree problem in graphs. In this paper we broaden the focus and consider reduction techniques for three Steiner problem variants that have been extensively discussed in the literature and entail various practical applications: The prize-collecting Steiner tree problem, the rooted prize-collecting Steiner tree problem and the maximum-weight connected subgraph problem. By introducing and subsequently deploying numerous new reduction methods, we are able to drastically decrease the size of a large number of benchmark instances, already solving more than 90 percent of them to optimality. Furthermore, we demonstrate the impact of these techniques on exact solving, using the example of the state-of-the-art Steiner problem solver SCIP-Jack. Y1 - 2019 U6 - https://doi.org/10.1002/net.21857 VL - 73 SP - 206 EP - 233 PB - Wiley ET - 2 ER - TY - JOUR A1 - Froyland, Gary A1 - Maher, Stephen J. A1 - Wu, Cheng-Lung T1 - The recoverable robust tail assignment problem JF - Transportation Science N2 - Schedule disruptions are commonplace in the airline industry with many flight-delaying events occurring each day. Recently there has been a focus on introducing robustness into airline planning stages to reduce the effect of these disruptions. We propose a recoverable robustness technique as an alternative to robust optimisation to reduce the effect of disruptions and the cost of recovery. We formulate the recoverable robust tail assignment problem (RRTAP) as a stochastic program, solved using column generation in the master and subproblems of the Benders' decomposition. We implement a two-phase algorithm for the Benders' decomposition and identify pareto-optimal cuts. The RRTAP includes costs due to flight delays, cancellation, and passenger rerouting, and the recovery stage includes cancellation, delay, and swapping options. To highlight the benefits of simultaneously solving planning and recovery problems in the RRTAP we compare our tail assignment solution against current approaches from the literature. Using airline data we demonstrate that by developing a better tail assignment plan via the RRTAP framework, one can reduce recovery costs in the event of a disruption. Y1 - 2014 U6 - https://doi.org/10.1287/trsc.2013.0463 VL - 48 IS - 3 SP - 351 EP - 372 ER - TY - JOUR A1 - Maher, Stephen J. A1 - Desaulniers, Guy A1 - Soumis, Francois T1 - Recoverable robust single day aircraft maintenance routing problem JF - Computers & Operations Research N2 - Aircraft maintenance planning is of critical importance to the safe and efficient operations of an airline. It is common to solve the aircraft routing and maintenance planning problems many months in advance, with the solution spanning multiple days. An unfortunate consequence of this approach is the possible infeasibility of the maintenance plan due to frequent perturbations occurring in operations. There is an emerging concept that focuses on the generation of aircraft routes for a single day to ensure maintenance coverage that night, alleviating the effects of schedule perturbations from preceding days. In this paper, we present a novel approach to ensure that a sufficient number of aircraft routes are provided each day so maintenance critical aircraft receive maintenance that night. By penalising the under supply of routes terminating at maintenance stations from each overnight airport, we construct a single day routing to provide the best possible maintenance plan. This single day aircraft maintenance routing problem (SDAMRP) is further protected from disruptions by applying the recoverable robustness framework. To efficiently solve the recoverable robust SDAMRP acceleration techniques, such as identifying Pareto-optimal cuts and a trust region approach, have been applied. The SDAMRP is evaluated against a set of flight schedules and the results demonstrate a significantly improved aircraft maintenance plan. Further, the results demonstrate the magnitude of recoverability improvement that is achieved by employing recoverable robustness to the SDAMRP. Y1 - 2014 U6 - https://doi.org/10.1016/j.cor.2014.03.007 VL - 51 SP - 130 EP - 145 ER - TY - JOUR A1 - Maher, Stephen J. T1 - Solving the integrated airline recovery problem using column-and-row generation JF - Transportation Science N2 - Airline recovery presents very large and difficult problems requiring high quality solutions within very short time limits. To improve computational performance, the complete airline recovery problem is generally formulated as a series of sequential stages. While the sequential approach greatly simplifies the complete recovery problem, there is no guarantee of global optimality or solution quality. To address this, there has been increasing interest in the development of efficient solution techniques to solve an integrated recovery problem. In this paper, an integrated airline recovery problem is proposed by integrating the schedule, crew and aircraft recovery stages. To achieve short runtimes and high quality solutions, this problem is solved using column-and-row generation. Column-and-row generation achieves an improvement in solution runtimes by reducing the problem size and thereby achieving a faster execution of each LP solve. Further, the results demonstrate that a good upper bound achieved early in the solution process, indicating an improved solution quality with the early termination of the algorithm. This paper also details the integration of the row generation procedure with branch-and-price, which is used to achieve integral optimal solutions. The benefits of applying column-and-row generation to solve the integrated recovery problem are demonstrated with a comparison to a standard column generation technique. Y1 - 2015 U6 - https://doi.org/10.1287/trsc.2014.0552 VL - 50 IS - 1 SP - 216 EP - 239 ER - TY - JOUR A1 - Maher, Stephen J. A1 - Murray, John M. T1 - The unrooted set covering connected subgraph problem differentiating between HIV envelope sequences JF - European Journal of Operational Research N2 - This paper presents a novel application of operations research techniques to the analysis of HIV Env gene sequences, aiming to identify key features that are possible vaccine targets. These targets are identified as being critical to the transmission of HIV by being present in early transmitted (founder) sequences and absent in later chronic sequences. Identifying the key features of Env involves two steps: first, calculating the covariance of amino acid combinations and positions to form a network of related and compensatory mutations; and second, developing an integer program to identify the smallest connected subgraph of the constructed covariance network that exhibits a set covering property. The integer program developed for this analysis, labelled the unrooted set covering connected subgraph problem (USCCSP), integrates a set covering problem and connectivity evaluation, the latter formulated as a network flow problem. The resulting integer program is very large and complex, requiring the use of Benders' decomposition to develop an efficient solution approach. The results will demonstrate the necessity of applying acceleration techniques to the Benders' decomposition solution approach and the effectiveness of these techniques and heuristic approaches for solving the USCCSP. Y1 - 2016 U6 - https://doi.org/doi:10.1016/j.ejor.2015.07.011 VL - 248 IS - 2 SP - 668 EP - 680 ER - TY - GEN A1 - Maher, Stephen J. A1 - Desaulniers, Guy A1 - Soumis, Francois T1 - The tail assignment problem with look-ahead maintenance constraints N2 - The tail assignment problem is a critical part of the airline planning process that assigns specific aircraft to sequences of flights, called lines-of-flight, to be operated the next day. The aim of this paper is to develop an operationally flexible tail assignment that satisfies short-range---within the next three days---aircraft maintenance requirements and performs the aircraft/flight gate assignment for each input line-of-flight. While maintenance plans commonly span multiple days, the related tail assignment problems can be overly complex and provide little recourse in the event of schedule perturbations. The presented approach addresses operational uncertainty by extending the one-day routes aircraft maintenance routing approach to satisfy maintenance requirements explicitly for the current day and implicitly for the subsequent two days. A mathematical model is presented that integrates the gate assignment and maintenance planning problems. To increase the satisfaction of maintenance requirements, an iterative algorithm is developed that modifies the fixed lines-of-flight provided as input to the tail assignment problem. The tail assignment problem and iterative algorithm are demonstrated to effectively satisfy maintenance requirements within appropriate run times using input data collected from three different airlines. T3 - ZIB-Report - 15-56 KW - Tail assignment KW - Column generation KW - Iterative algorithm Y1 - 2015 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-56717 SN - 1438-0064 ER - TY - GEN A1 - Bestuzheva, Ksenia A1 - Besançon, Mathieu A1 - Chen, Wei-Kun A1 - Chmiela, Antonia A1 - Donkiewicz, Tim A1 - van Doornmalen, Jasper A1 - Eifler, Leon A1 - Gaul, Oliver A1 - Gamrath, Gerald A1 - Gleixner, Ambros A1 - Gottwald, Leona A1 - Graczyk, Christoph A1 - Halbig, Katrin A1 - Hoen, Alexander A1 - Hojny, Christopher A1 - van der Hulst, Rolf A1 - Koch, Thorsten A1 - Lübbecke, Marco A1 - Maher, Stephen J. A1 - Matter, Frederic A1 - Mühmer, Erik A1 - Müller, Benjamin A1 - Pfetsch, Marc E. A1 - Rehfeldt, Daniel A1 - Schlein, Steffan A1 - Schlösser, Franziska A1 - Serrano, Felipe A1 - Shinano, Yuji A1 - Sofranac, Boro A1 - Turner, Mark A1 - Vigerske, Stefan A1 - Wegscheider, Fabian A1 - Wellner, Philipp A1 - Weninger, Dieter A1 - Witzig, Jakob T1 - The SCIP Optimization Suite 8.0 N2 - The SCIP Optimization Suite provides a collection of software packages for mathematical optimization centered around the constraint integer programming framework SCIP. This paper discusses enhancements and extensions contained in version 8.0 of the SCIP Optimization Suite. Major updates in SCIP include improvements in symmetry handling and decomposition algorithms, new cutting planes, a new plugin type for cut selection, and a complete rework of the way nonlinear constraints are handled. Additionally, SCIP 8.0 now supports interfaces for Julia as well as Matlab. Further, UG now includes a unified framework to parallelize all solvers, a utility to analyze computational experiments has been added to GCG, dual solutions can be postsolved by PaPILO, new heuristics and presolving methods were added to SCIP-SDP, and additional problem classes and major performance improvements are available in SCIP-Jack. T3 - ZIB-Report - 21-41 KW - Constraint integer programming KW - Linear programming KW - Mixed-integer linear programming KW - Mixed-integer nonlinear programming KW - Optimization solver KW - Branch-and-cut KW - Branch-and-price KW - Column generation KW - Parallelization KW - Mixed-integer semidefinite programming Y1 - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:0297-zib-85309 SN - 1438-0064 ER - TY - JOUR A1 - Bestuzheva, Ksenia A1 - Besançon, Mathieu A1 - Chen, Wei-Kun A1 - Chmiela, Antonia A1 - Donkiewicz, Tim A1 - Doornmalen, Jasper A1 - Eifler, Leon A1 - Gaul, Oliver A1 - Gamrath, Gerald A1 - Gleixner, Ambros A1 - Gottwald, Leona A1 - Graczyk, Christoph A1 - Halbig, Katrin A1 - Hoen, Alexander A1 - Hojny, Christopher A1 - Hulst, Rolf A1 - Koch, Thorsten A1 - Lübbecke, Marco A1 - Maher, Stephen J. A1 - Matter, Frederic A1 - Mühmer, Erik A1 - Müller, Benjamin A1 - Pfetsch, Marc A1 - Rehfeldt, Daniel A1 - Schlein, Steffan A1 - Schlösser, Franziska A1 - Serrano, Felipe A1 - Shinano, Yuji A1 - Sofranac, Boro A1 - Turner, Mark A1 - Vigerske, Stefan A1 - Wegscheider, Fabian A1 - Wellner, Philipp A1 - Weninger, Dieter A1 - Witzig, Jakob T1 - Enabling research through the SCIP optimization suite 8.0 JF - ACM Transactions on Mathematical Software N2 - The SCIP Optimization Suite provides a collection of software packages for mathematical optimization centered around the constraint integer programming framework SCIP. The focus of this article is on the role of the SCIP Optimization Suite in supporting research. SCIP’s main design principles are discussed, followed by a presentation of the latest performance improvements and developments in version 8.0, which serve both as examples of SCIP’s application as a research tool and as a platform for further developments. Furthermore, this article gives an overview of interfaces to other programming and modeling languages, new features that expand the possibilities for user interaction with the framework, and the latest developments in several extensions built upon SCIP. Y1 - 2023 U6 - https://doi.org/10.1145/3585516 VL - 49 IS - 2 SP - 1 EP - 21 ER -