@article{PowellWeiser2000, author = {Powell, Gary and Weiser, Martin}, title = {Views, A new form of container adaptors}, volume = {18}, journal = {C/C++ Users Journal}, number = {4}, pages = {40 -- 51}, year = {2000}, abstract = {The C++ standard template library has many useful containers for data. The standard library includes two adpators, queue, and stack. The authors have extended this model along the lines of relational database semantics. Sometimes the analogy is striking, and we will point it out occasionally. An adaptor allows the standard algorithms to be used on a subset or modification of the data without having to copy the data elements into a new container. The authors provide many useful adaptors which can be used together to produce interesting views of data in a container.}, language = {en} } @misc{Sali2016, type = {Master Thesis}, author = {Sali, Adrian}, title = {Coupling of Monodomain and Eikonal Models for Cardiac Electrophysiology}, pages = {63}, year = {2016}, abstract = {The primary goal of this paper is to study the coupling of monodomain and eikonal models for the numerical simulation of cardiac electrophysiology. Eikonal models are nonlinear elliptic equations describing the excitation time of the cardiac tissue. They are often used as very fast approximations for monodomain or bidomain models - parabolic reaction-diffusion systems describing the excitation wavefront in terms of ionic currents. The excitation front is a thin region with high gradients, whereas excitation times vary over larger domains. Hence, eikonal equations can be solved on much coarser grids than monodomain equations. Moreover, as eikonal models are not time-dependent, no time integration is needed. Eikonal models are derived from monodomain models making additional assumptions and using certain approximations. While generally the approximation is rather good, several specific situations are not well captured by eikonal models. We consider coupling the two models, i.e. using the monodomain model in regions where more accurate results or the shape of the wavefront are needed, and the eikonal model in the remaining parts of the domain, where the excitation time is sufficient. Restricting the monodomain simulation to a small subdomain reduces the computational effort considerably. Numerical methods for the simulation of the individual models are presented, with the finite element method as the main ingredient. Coupling conditions as well as algorithms for implementing the coupling are explained. The approximation quality and efficiency of the coupled model is illustrated on simple geometries using an Aliev-Panfilov membrane model.}, language = {en} } @article{WeiserGhosh2018, author = {Weiser, Martin and Ghosh, Sunayana}, title = {Theoretically optimal inexact SDC methods}, journal = {Communications in Applied Mathematics and Computational Science}, number = {13-1}, doi = {10.2140/camcos.2018.13.53}, pages = {53 -- 86}, year = {2018}, abstract = {In several inital value problems with particularly expensive right hand side evaluation or implicit step computation, there is a trade-off between accuracy and computational effort. We consider inexact spectral deferred correction (SDC) methods for solving such initial value problems. SDC methods are interpreted as fixed point iterations and, due to their corrective iterative nature, allow to exploit the accuracy-work-tradeoff for a reduction of the total computational effort. On one hand we derive error models bounding the total error in terms of the evaluation errors. On the other hand, we define work models describing the computational effort in terms of the evaluation accuracy. Combining both, a theoretically optimal local tolerance selection is worked out by minimizing the total work subject to achieving the requested tolerance. The properties of optimal local tolerances and the predicted efficiency gain compared to simpler heuristics, and a reasonable practical performance, are illustrated on simple numerical examples.}, language = {en} } @article{HochmuthDeuflhard2004, author = {Hochmuth, Reinhard and Deuflhard, Peter}, title = {Multiscale Analysis for the Bio-Heat-Transfer Equation - The Nonisolated Case}, volume = {14}, journal = {Mathematical Models and Methods in Applied Sciences (M\$^3\$AS)}, number = {11}, pages = {1621 -- 1634}, year = {2004}, language = {en} } @article{HellerDudaEhrigetal.2005, author = {Heller, Markus O. and Duda, Georg and Ehrig, Rainald and Schell, H. and Seebeck, P. and Taylor, William R.}, title = {Muskuloskeletale Belastungen im Schafshinterlauf}, journal = {Materialwissenschaft und Werkstofftechnik}, number = {36}, pages = {775 -- 780}, year = {2005}, language = {en} } @inproceedings{HellerDudaKoenigetal.2005, author = {Heller, Markus O. and Duda, G. and K{\"o}nig, Christian and Taylor, William R. and Ehrig, Rainald and Hinterwimmer, S. and Graichen, H.}, title = {Validation of a New Model of Human Knee Kinematics against in Vivo Data under Physiologic Neuromuscular Activation Patterns}, booktitle = {Proceedings of the 51th Annual Meeting of the Orthopedic Society}, address = {Washington}, year = {2005}, language = {en} } @article{HellmichKoberErdmann2008, author = {Hellmich, Christian and Kober, Cornelia and Erdmann, Bodo}, title = {Micromechanics-based conversion of CT data into anisotropic elasticity tensors, applied to FE simulations of a mandible}, volume = {36}, journal = {Annals of Biomedical Engineering}, number = {1}, doi = {10.1007/s10439-007-9393-8}, pages = {108 -- 122}, year = {2008}, language = {en} } @article{HellerKratzensteinEhrigetal.2011, author = {Heller, Markus O. and Kratzenstein, Stefan and Ehrig, Rainald and Wassilew, Georgi and Duda, Georg and Taylor, William R.}, title = {The weighted optimal common shape technique improves identification of the hip joint centre of rotation in vivo}, volume = {29}, journal = {Journal of Orthopedic Research}, pages = {1470 -- 5}, year = {2011}, language = {en} } @article{GellermannWeihrauchChoetal.2006, author = {Gellermann, Johanna and Weihrauch, Mirko and Cho, C. and Wlodarczyk, Waldemar and F{\"a}hling, Horst and Felix, Roland and Budach, Volker and Weiser, Martin and Nadobny, Johanna and Wust, Peter}, title = {Comparison of MR-thermography and planning calculations in phantoms}, volume = {33}, journal = {Medical Physics}, pages = {3912 -- 3920}, year = {2006}, language = {en} } @article{HellerKoenigGraichenetal.2007, author = {Heller, Markus O. and K{\"o}nig, Christian and Graichen, F. and Hinterwimmer, S. and Ehrig, Rainald and Duda, G. and Taylor, William R.}, title = {A new model to predict in vivo human knee kinematics under physiological-like muscle activation}, journal = {Journal of Biomechanics}, pages = {45 -- 53}, year = {2007}, language = {en} }