@phdthesis{Zschiedrich2009, author = {Zschiedrich, Lin}, title = {Transparent boundary conditions for Maxwell's equations: Numerical concepts beyond the PML method}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:188-fudissthesis000000013994-8}, year = {2009}, abstract = {Optical technologies are ubiquitously used in hi-tech devices. As a common feature of such devices one finds structures with dimensions in the order of the wavelength of the used light. To design and produce such devices, the wave nature of light must be taken into account. Accordingly, robust simulation tools are required which are based on rigorously solving Maxwell's equations, the governing equations of light propagation within macroscopic media. This thesis contributes to the modeling and the numerical computation of light scattering problems: Light scattering problems are typically posed on the entire space. The Perfectly-Matched -Layer method (PML) is widely used to restrict the simulation problem onto a bounded computational domain. We propose an adaptive PML method which exhibits a good convergence even for critical problems where standard PML implementations fail. Besides the computation of the near field, that is the electromagnetic field within the computational domain, it is of major interest to evaluate the electromagnetic field in the exterior domain and to compute the far field. So far, this was numerically only possible for simple geometries such as homogeneous exterior domains or layered media. To deal with more complicated devices, for example with waveguide inhomogeneities, we develop an evaluation formula based on the PML solution which allows for an exterior domain field evaluation in a half space above the device. Finally, we generalize the PML method to problems with multiply structured exterior domains. The term "multiply structured exterior domain" is defined in this thesis and means that the exterior domain exhibits several half-infinite structures. Mathematically, this gives rise to various complications. For example, no analytical solutions to Maxwell's equations for standard light sources are available in the exterior domain, which are needed to describe the incoming field in a light scattering problem. To tackle this we propose a new light scattering problem formulation which fits well into the PML method framework and which may be regarded as an extension of classical contributions by Sommerfeld, Wiener and Hopf. An exterior domain evaluation formula for multiply structured exterior domains with an extended illumination is derived as well.}, language = {en} } @misc{OevermannScharfenbergKlein2008, author = {Oevermann, Michael and Scharfenberg, Carsten and Klein, Rupert}, title = {A sharp interface finite volume method for elliptic equations on Cartesian grids}, issn = {1438-0064}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-10900}, number = {08-38}, year = {2008}, abstract = {We present a second order sharp interface finite volume method for the solution of the three-dimensional poisson equation with variable coefficients on Cartesian grids. In particular, we focus on interface problems with discontinuities in the coefficient, the source term, the solution, and the fluxes across the interface. The method uses standard piecewiese trilinear finite elements for normal cells and a double piecewise trilinear ansatz for the solution on cells intersected by the interface resulting always in a compact 27-point stencil. Singularities associated with vanishing partial volumes of intersected grid cells are removed by a two-term asymptotic approach. In contrast to the 2D method presented by two of the authors in [M.~Oevermann, R.~Klein: A Cartesian grid finite volume method for elliptic equations with variable coefficients and embedded interfaces, J.~Comp.~Phys.~219 (2006)] we use a minimization technique to determine the unknown coefficients of the double trilinear ansatz. This simplifies the treatment of the different cut-cell types and avoids additional special operations for degenerated interface topologies. The resulting set of linear equations has been solved with a BiCGSTAB solver preconditioned with an algebraic multigrid. In various testcases -- including large coefficient ratios and non-smooth interfaces -- the method achieves second order of accuracy in the L_inf and L_2 norm.}, language = {en} } @misc{GoetschelWeiserSchiela2010, author = {G{\"o}tschel, Sebastian and Weiser, Martin and Schiela, Anton}, title = {Solving Optimal Control Problems with the Kaskade 7 Finite Element Toolbox}, issn = {1438-0064}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-11909}, number = {10-25}, year = {2010}, abstract = {This paper presents concepts and implementation of the finite element toolbox Kaskade 7, a flexible C++ code for solving elliptic and parabolic PDE systems. Issues such as problem formulation, assembly and adaptivity are discussed at the example of optimal control problems. Trajectory compression for parabolic optimization problems is considered as a case study.}, language = {en} } @misc{GuentherLameckerWeiser2011, author = {G{\"u}nther, Andreas and Lamecker, Hans and Weiser, Martin}, title = {Direct LDDMM of Discrete Currents with Adaptive Finite Elements}, doi = {10.1007/s11263-012-0599-3}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-13090}, number = {11-22}, year = {2011}, abstract = {We consider Large Deformation Diffeomorphic Metric Mapping of general \$m\$-currents. After stating an optimization algorithm in the function space of admissable morph generating velocity fields, two innovative aspects in this framework are presented and numerically investigated: First, we spatially discretize the velocity field with conforming adaptive finite elements and discuss advantages of this new approach. Second, we directly compute the temporal evolution of discrete \$m\$-current attributes.}, language = {en} } @misc{LubkollSchielaWeiser2012, author = {Lubkoll, Lars and Schiela, Anton and Weiser, Martin}, title = {An optimal control problem in polyconvex hyperelasticity}, issn = {1438-0064}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-14745}, number = {12-08}, year = {2012}, abstract = {We consider a shape implant design problem that arises in the context of facial surgery. We introduce a reformulation as an optimal control problem, where the control acts as a boundary force. The state is modelled as a minimizer of a polyconvex hyperelastic energy functional. We show existence of optimal solutions and derive - on a formal level - first order optimality conditions. Finally, preliminary numerical results are presented.}, language = {en} } @misc{WeiserDeuflhardErdmann2004, author = {Weiser, Martin and Deuflhard, Peter and Erdmann, Bodo}, title = {Affine conjugate adaptive Newton methods for nonlinear elastomechanics}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-7768}, number = {04-01}, year = {2004}, abstract = {The paper extends affine conjugate Newton methods from convex to nonconvex minimization, with particular emphasis on PDE problems originating from compressible hyperelasticity. Based on well-known schemes from finite dimensional nonlinear optimization, three different algorithmic variants are worked out in a function space setting, which permits an adaptive multilevel finite element implementation. These algorithms are tested on two well-known 3D test problems and a real-life example from surgical operation planning.}, language = {en} } @misc{OevermannKlein2006, author = {Oevermann, Michael and Klein, Rupert}, title = {A cartesian grid finite volume method for the solution of the Poisson equation with variable coefficients and embedded interfaces}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-8996}, number = {06-05}, year = {2006}, abstract = {We present a finite volume method for the solution of the two-dimensional Poisson equation \$ \nabla\cdot( \beta( {\mbox{\boldmath \$x\$}}) \nabla u({\mbox{\boldmath \$x\$}})) = f(\mbox{\boldmath \$x\$}) \$ with variable, discontinuous coefficients and solution discontinuities on irregular domains. The method uses bilinear ansatz functions on Cartesian grids for the solution \$u({\mbox{\boldmath \$x\$})\$ resulting in a compact nine-point stencil. The resulting linear problem has been solved with a standard multigrid solver. Singularities associated with vanishing partial volumes of intersected grid cells or the dual bilinear ansatz itself are removed by a two-step asymptotic approach. The method achieves second order of accuracy in the \$L^\infty\$ and \$L^2\$ norm.}, language = {en} } @misc{GoetschelWeiser2019, author = {G{\"o}tschel, Sebastian and Weiser, Martin}, title = {Lossy Compression for Large Scale PDE Problems}, issn = {1438-0064}, doi = {10.1101/506378}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-73817}, year = {2019}, abstract = {Solvers for partial differential equations (PDE) are one of the cornerstones of computational science. For large problems, they involve huge amounts of data that needs to be stored and transmitted on all levels of the memory hierarchy. Often, bandwidth is the limiting factor due to relatively small arithmetic intensity, and increasingly so due to the growing disparity between computing power and bandwidth. Consequently, data compression techniques have been investigated and tailored towards the specific requirements of PDE solvers during the last decades. This paper surveys data compression challenges and corresponding solution approaches for PDE problems, covering all levels of the memory hierarchy from mass storage up to main memory. Exemplarily, we illustrate concepts at particular methods, and give references to alternatives.}, language = {en} } @misc{GoetschelSchielaWeiser2019, author = {G{\"o}tschel, Sebastian and Schiela, Anton and Weiser, Martin}, title = {Kaskade 7 -- a Flexible Finite Element Toolbox}, issn = {1438-0064}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-74616}, year = {2019}, abstract = {Kaskade 7 is a finite element toolbox for the solution of stationary or transient systems of partial differential equations, aimed at supporting application-oriented research in numerical analysis and scientific computing. The library is written in C++ and is based on the Dune interface. The code is independent of spatial dimension and works with different grid managers. An important feature is the mix-and-match approach to discretizing systems of PDEs with different ansatz and test spaces for all variables. We describe the mathematical concepts behind the library as well as its structure, illustrating its use at several examples on the way.}, language = {en} } @misc{DeuflhardLeinenYserentant1988, author = {Deuflhard, Peter and Leinen, P. and Yserentant, Harry}, title = {Concepts of an Adaptive Hierarchical Finite Element Code.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-131}, number = {SC-88-05}, year = {1988}, abstract = {The paper presents the mathematical concepts underlying the new adaptive finite element code KASKADE, which, in its present form, applies to linear scalar second-order 2-D elliptic problems on general domains. Starting point for the new development is the recent work on hierarchical finite element bases due to Yserentant (1986). It is shown that this approach permits a flexible balance between iterative solver, local error estimator, and local mesh refinement device - which are the main components of an adaptive PDE code. Without use of standard multigrid techniques, the same kind of computational complexity is achieved - independent of any uniformity restrictions on the applied meshes. In addition, the method is extremely simple and all computations are purely local - making the method particularly attractive in view of parallel computing. The algorithmic approach is illustrated by a well-known critical test problem. {\bf Keywords:} finite elements, hierarchical basis, adaptive mesh refinement, preconditioned conjugate gradient methods.}, language = {en} } @misc{BornemannYserentant1992, author = {Bornemann, Folkmar A. and Yserentant, Harry}, title = {A Basic Norm Equivalence for the Theory of Multilevel Methods.}, doi = {10.1007/BF01388699}, number = {SC-92-01}, year = {1992}, abstract = {Subspace decompositions of finite element spaces based on \$L2\$-like orthogonal projections play an important role for the construction and analysis of multigrid like iterative methods. Recently several authors proved the equivalence of the associated discrete norms with the \$H^1\$-norm. The present report gives an elementary, self-contained derivation of this result which is based on the use of \$ K\$-functionals known from the theory of interpolation spaces. {\bf Keywords:} multilevel methods, nonuniform meshes, optimal convergence rates. {\bf AMS(MOS) Subject classifications:} 65N55, 65N30, 65N50.}, language = {en} } @misc{Bornemann1991, author = {Bornemann, Folkmar A.}, title = {An Adaptive Multilevel Approach to Parabolic Equations III.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-519}, number = {SC-91-01}, year = {1991}, abstract = {Part III of the paper is devoted to the construction of an adaptive FEM solver in two spatial dimensions, which is able to handle the singularly perturbed elliptic problems arising from discretization in time. The problems of error estimation and multilevel iterative solution of the linear systems - both uniformly well behaved with respect to the time step - can be solved simultaneously within the framework of preconditioning. A multilevel nodal basis preconditioner able to handle highly nonuniform meshes is derived. As a numerical example an application of the method to the bioheat-transfer equation is included. {\bf AMS CLASSIFICATION:} 65F10, 65F35, 65M50, 65M60, 65N30.}, language = {en} } @misc{LangWalter1991, author = {Lang, Jens and Walter, Artur}, title = {An Adaptive Discontinuous Finite Element Method for the Transport Equation.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-579}, number = {SC-91-07}, year = {1991}, abstract = {In this paper we introduce a discontinuous finite element method. In our approach, it is possible to combine the advantages of finite element and finite difference methods. The main ingredients are numerical flux approximation and local orthogonal basis functions. The scheme is defined on arbitrary triangulations and can be easily extended to nonlinear problems. Two different error indicators are derived. Especially the second one is closely connected to our approach and able to handle arbitrary variing flow directions. Numerical results are given for boundary value problems in two dimensions. They demonstrate the performance of the scheme, combined with the two error indicators. {\bf Key words:} neutron transport equation, discontinuous finite element, adaptive grid refinement. {\bf Subject classifications:} AMS(MOS) 65N30, 65M15.}, language = {en} } @misc{Bornemann1991, author = {Bornemann, Folkmar A.}, title = {A Sharpened Condition Number Estimate for the BPX Preconditioner of Elliptic Finite Element Problems on Highly Nonuniform Triangulations.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-596}, number = {SC-91-09}, year = {1991}, abstract = {In this paper it is shown that for highly nonuniformly refined triangulations the condition number of the BPX preconditioner for elliptic finite element problems grows at most linearly in the depth of refinement. This is achieved by viewing the computational available version of the BPX preconditioner as an abstract additive Schwarz method with exact solvers. {\bf AMS CLASSIFICATION:} 65F10, 65F35, 65N20, 65N30.}, language = {en} } @misc{KornhuberRoitzsch1989, author = {Kornhuber, Ralf and Roitzsch, Rainer}, title = {On Adaptive Grid Refinement in the Presence of Internal or Boundary Layers.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-230}, number = {SC-89-05}, year = {1989}, abstract = {We propose an anisotropic refinement strategy which is specially designed for the efficient numerical resolution of internal and boundary layers. This strategy is based on the directed refinement of single triangles together with adaptive multilevel grid orientation. It is demonstrated by several numerical examples that compared to usual methods, the new anisotropic refinement ends up in more stable and more accurate solutions at much less computational cost. {\bf Keywords:} Adaptive finite elements, directed refinement, adaptive grid orientation, convection diffusion equation, internal and boundary layers.}, language = {en} } @misc{Yserentant1989, author = {Yserentant, Harry}, title = {Two Preconditioners Based on the Multi-Level Splitting of Finite Element Spaces.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-274}, number = {SC-89-09}, year = {1989}, abstract = {The hierarchical basis preconditioner and the recent preconditioner of BRAMBLE, PASCIAK and XU are derived and analyzed within a joint framework. This discussion elucidates the close relationship between both methods. Special care is devoted to highly nonuniform meshes; our theory is based exclusively on local properties like the shape regularity of the finite elements.}, language = {en} } @misc{Walter1990, author = {Walter, Artur}, title = {Improvement of Incomplete Factorizations by a Sparse Secant Method.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-401}, number = {SC-90-12}, year = {1990}, abstract = {In the present paper, the improvement of an incomplete factorization of a non-symmetric matrix A is discussed. Starting from the ideas of sparsity preserving quasi-Newton methods, an algorithm is developed which improves the approximation of A by the incomplete factorization maintaining the sparsity structure of the matrices. No renumbering of the unknowns or the admittance of additional fill-in is necessary. The linear convergence of the algorithm is proved under the assumption, that \$ L \$ and \$ U \$* have the same sparsity structure and an incomplete factorization with some reasonable approximation property exits. In combination with this algorithm, the method of incomplete factorization and its several modifications are applicable to a wider class of problems with improved convergence qualities. This is shown by a numerical example. {\bf Key Words:} non-symmetric linear system, sparse secant method, incomplete factorization. AMS(MOS) {\bf Subject Classifications:} 65F10, 65N20, 65N30.}, language = {en} } @misc{BankDupontYserentant1987, author = {Bank, Randolph and Dupont, Todd F. and Yserentant, Harry}, title = {The Hierarchical Basis Multigrid Method.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-44}, number = {SC-87-02}, year = {1987}, abstract = {We derive and analyze the hierarchical basis-multigrid method for solving discretizations of self-adjoint, elliptic boundary value problems using piecewise linear triangular finite elements. The method is analyzed as a block symmetric Gauß- Seidel iteration with inner iterations, but it is strongly related to 2-level methods, to the standard multigrid V-cycle, and to earlier Jacobi-like hierarchical basis methods. The method is very robust, and has a nearly optimal convergence rate and work estimate. It is especially well suited to difficult problems with rough solutions, discretized using highly nonuniform, adaptively refined meshes.}, language = {en} } @misc{Yserentant1987, author = {Yserentant, Harry}, title = {Preconditioning Indefinite Discretization Matrices.}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-81}, number = {SC-87-06}, year = {1987}, abstract = {The finite element discretization of many elliptic boundary value problems leads to linear systems with positive definite and symmetric coefficient matrices. Many efficient preconditioners are known for these systems. We show that these preconditioning matrices can be used also for the linear systems arising from boundary value problems which are potentially indefinite due to lower order terms in the partial differential equation. Our main tool is a careful algebraic analysis of the condition numbers and the spectra of perturbed matrices which are preconditioned by the same matrices as in the unperturbed case. {\bf Keywords: }Preconditioned conjugate gradient methods, finite elements. {\bf Subject Classification: } AMS(MOS):65F10, 65N20, 65N30.}, language = {en} } @misc{DeuflhardSeebass1998, author = {Deuflhard, Peter and Seebass, Martin}, title = {Adaptive Multilevel FEM as Decisive Tools in the Clinical Cancer Therapy Hyperthermia}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-3739}, number = {SC-98-30}, year = {1998}, abstract = {The paper surveys recent progress in a joint mathematical-medical project on cancer therapy planning. Within so-called regional hyperthermia the computational task is to tune a set of coupled radiofrequency antennas such that a carefully measured tumor is locally heated, but any outside hot spots are avoided. A mathematical model of the whole clinical system -- air, applicator with antennas, water bolus, individual patient body -- involves Maxwell's equations in inhomogeneous media and a parabolic bioheat transfer equation, which represents a simplified model of heat transfer in the human body (ignoring strong blood vessel heat transport). Both PDEs need to be computed fast and to medical reliability (!) on a workstation within a clinical environment. This requirement triggered a series of new algorithmic developments to be reported here, among which is an adaptive multilevel FEM for Maxwell's equations, which dominates the numerical simulation time. In total, however, the main bulk of computation time (see Table 3 in Section 4 below) still goes into segmentation -- a necessary preprocessing step in the construction a 3D virtual patient from the input of a stack of 2D computed tomograms (left out here).}, language = {en} } @misc{BurgerKloseSchaedleetal.2003, author = {Burger, Sven and Klose, Roland and Sch{\"a}dle, Achim and Zschiedrich, Lin}, title = {HelmPole - A finite element solver for scattering problems on unbounded domains: Implementation based on PML}, url = {http://nbn-resolving.de/urn:nbn:de:0297-zib-7609}, number = {03-38}, year = {2003}, abstract = {The solution of scattering problems described by the Helmholtz equation on unbounded domains is of importance for a wide variety of applications, for example in electromagnetics and acoustics. An implementation of a solver for scattering problems based on the programming language Matlab is introduced. The solver relies on the finite-element-method and on the perfectly-matched-layer-method, which allows for the simulation of scattering problems on complex geometries surrounded by inhomogeneous exterior domains. This report gives a number of detailed examples and can be understood as a user manual to the freely accessible code of the solver HelmPole.}, language = {en} }