@book{SchuetteSarich2013, author = {Sch{\"u}tte, Christof and Sarich, Marco}, title = {Metastability and Markov State Models in Molecular Dynamics: Modeling, Analysis, Algorithmic Approaches}, publisher = {American Mathematical Society}, year = {2013}, language = {en} } @article{HartmannBanischSarichetal.2013, author = {Hartmann, Carsten and Banisch, Ralf and Sarich, Marco and Badowski, Thomas and Sch{\"u}tte, Christof}, title = {Characterization of Rare Events in Molecular Dynamics}, volume = {16}, journal = {Entropy (Special Issue)}, number = {1}, doi = {10.3390/e16010350}, pages = {350 -- 376}, year = {2013}, language = {en} } @article{SarichBanischHartmannetal.2013, author = {Sarich, Marco and Banisch, Ralf and Hartmann, Carsten and Sch{\"u}tte, Christof}, title = {Markov State Models for Rare Events in Molecular Dynamics}, volume = {16}, journal = {Entropy (Special Issue)}, number = {1}, doi = {10.3390/e16010258}, pages = {258 -- 286}, year = {2013}, language = {en} } @article{SarichDjurdjevacConradBruckneretal.2014, author = {Sarich, Marco and Djurdjevac Conrad, Natasa and Bruckner, Sharon and Conrad, Tim and Sch{\"u}tte, Christof}, title = {Modularity revisited: A novel dynamics-based concept for decomposing complex networks}, volume = {1}, journal = {Journal of Computational Dynamics}, number = {1}, doi = {10.3934/jcd.2014.1.191}, pages = {191 -- 212}, year = {2014}, language = {en} } @article{SarichSchuette2012, author = {Sarich, Marco and Sch{\"u}tte, Christof}, title = {Approximating Selected Non-dominant Timescales by Markov State Models}, volume = {10}, journal = {Comm. Math. Sci.}, number = {3}, doi = {10.4310/CMS.2012.v10.n3.a14}, pages = {1001 -- 1013}, year = {2012}, language = {en} } @article{SchuetteNoeLuetal.2011, author = {Sch{\"u}tte, Christof and No{\´e}, Frank and Lu, Jianfeng and Sarich, Marco and Vanden-Eijnden, E.}, title = {Markov State Models Based on Milestoning}, volume = {134}, journal = {J. Chem. Phys.}, number = {20}, doi = {10.1063/1.3590108}, pages = {204105}, year = {2011}, language = {en} } @article{PrinzWuSarichetal.2011, author = {Prinz, J.-H. and Wu, Hao and Sarich, Marco and Keller, B. and Fischbach, M. and Held, M. and Chodera, J. and Sch{\"u}tte, Christof and No{\´e}, Frank}, title = {Markov models of molecular kinetics}, volume = {134}, journal = {J. Chem. Phys.}, doi = {10.1063/1.3565032}, pages = {174105}, year = {2011}, language = {en} } @article{DjurdjevacConradSarichSchuette2012, author = {Djurdjevac Conrad, Natasa and Sarich, Marco and Sch{\"u}tte, Christof}, title = {Estimating the eigenvalue error of Markov State Models}, volume = {10}, journal = {Multiscale Modeling \& Simulation}, number = {1}, doi = {10.1137/100798910}, pages = {61 -- 81}, year = {2012}, language = {en} } @article{SarichSchuetteVandenEijnden2010, author = {Sarich, Marco and Sch{\"u}tte, Christof and Vanden-Eijnden, E.}, title = {Optimal Fuzzy Aggregation of Networks}, volume = {8}, journal = {Multiscale Modeling and Simulation}, number = {4}, doi = {10.1137/090758519}, pages = {1535 -- 1561}, year = {2010}, language = {en} } @inproceedings{DjurdjevacConradSarichSchuette2010, author = {Djurdjevac Conrad, Natasa and Sarich, Marco and Sch{\"u}tte, Christof}, title = {On Markov State Models for Metastable Processes}, booktitle = {Proceedings of the International Congress of Mathematics, Hyderabad, India, Section Invited Talks. (ICM) 2010}, year = {2010}, language = {en} }