@article{WiebelVosFoersteretal.2012, author = {Wiebel, Alexander and Vos, Frans and Foerster, David and Hege, Hans-Christian}, title = {WYSIWYP: What You See Is What You Pick}, series = {IEEE Transactions on Visualization and Computer Graphics}, volume = {18}, journal = {IEEE Transactions on Visualization and Computer Graphics}, number = {12}, doi = {10.1109/TVCG.2012.292}, pages = {2236 -- 2244}, year = {2012}, language = {en} } @article{GoubergritsWeberPetzetal.2009, author = {Goubergrits, Leonid and Weber, Sarah and Petz, Christoph and Spuler, Andreas and P{\"o}thke, Jens and Berthe, Andr{\´e} and Hege, Hans-Christian}, title = {Wall-PIV as a Near Wall Flow Validation Tool for CFD}, series = {Journal of Visualization}, volume = {12}, journal = {Journal of Visualization}, number = {3}, pages = {241 -- 250}, year = {2009}, language = {en} } @misc{PetzWeinkaufStreckwalletal.2006, author = {Petz, Christoph and Weinkauf, Tino and Streckwall, Heinrich and Salvatore, Franceso and Noack, Bernd R. and Hege, Hans-Christian}, title = {Vortex Structures at a Rotating Ship Propeller}, publisher = {Presented at the 24th Annual Gallery of Fluid Motion exhibit, held at the 59th Annual Meeting of the American Physical Society, Division of Fluid Dynamics, Tampa Bay}, year = {2006}, language = {en} } @inproceedings{KastenHotzNoacketal.2012, author = {Kasten, Jens and Hotz, Ingrid and Noack, Bernd and Hege, Hans-Christian}, title = {Vortex Merge Graphs in Two-dimensional Unsteady Flow Fields}, series = {EuroVis - Short Papers}, booktitle = {EuroVis - Short Papers}, publisher = {Eurographics Association}, address = {Vienna, Austria}, doi = {10.2312/PE/EuroVisShort/EuroVisShort2012/001-005}, pages = {1 -- 5}, year = {2012}, language = {en} } @misc{SahnerWeinkaufTeuberetal.2007, author = {Sahner, Jan and Weinkauf, Tino and Teuber, Nathalie and Hege, Hans-Christian}, title = {Vortex and strain skeletons in Eulerian and Lagrangian frames}, doi = {10.1109/TVCG.2007.1053}, pages = {980 -- 990}, year = {2007}, language = {en} } @article{LindowBaumHege2011, author = {Lindow, Norbert and Baum, Daniel and Hege, Hans-Christian}, title = {Voronoi-Based Extraction and Visualization of Molecular Paths}, series = {IEEE Transactions on Visualization and Computer Graphics}, volume = {17}, journal = {IEEE Transactions on Visualization and Computer Graphics}, number = {12}, doi = {10.1109/TVCG.2011.259}, pages = {2025 -- 2034}, year = {2011}, language = {en} } @article{HegeHoellererStalling1996, author = {Hege, Hans-Christian and H{\"o}llerer, Tobias and Stalling, Detlev}, title = {Volume Rendering: Mathematical Models and Algorithmic Aspects}, series = {Partielle Differentialgleichungen, Numerik und Anwendungen, Konferenzen des Forschungszentrum J{\"u}lich GmbH}, journal = {Partielle Differentialgleichungen, Numerik und Anwendungen, Konferenzen des Forschungszentrum J{\"u}lich GmbH}, publisher = {W. Nagel}, pages = {227 -- 255}, year = {1996}, language = {en} } @inproceedings{HoellererToenniesHegeetal.1995, author = {H{\"o}llerer, Tobias and T{\"o}nnies, Klaus and Hege, Hans-Christian and Stalling, Detlev}, title = {Volume Rendering on Irregular Grids (Abstract)}, series = {Int. Workshop on Mathematics and Visualization}, booktitle = {Int. Workshop on Mathematics and Visualization}, address = {Berlin, Germany}, year = {1995}, language = {en} } @article{SchmidtEhrenbergBaumHege2001, author = {Schmidt-Ehrenberg, Johannes and Baum, Daniel and Hege, Hans-Christian}, title = {Visually stunning - Molecular conformations}, series = {The Biochemist}, volume = {23}, journal = {The Biochemist}, number = {5}, pages = {22 -- 26}, year = {2001}, language = {en} } @article{ShiWeinkaufTheiseletal.2008, author = {Shi, Kuangyu and Weinkauf, Tino and Theisel, Holger and Hege, Hans-Christian and Seidel, Hans-Peter}, title = {Visualizing Transport Structures of Time-Dependent Flow Fields}, series = {IEEE Computer Graphics and Applications}, journal = {IEEE Computer Graphics and Applications}, doi = {10.1109/MCG.2008.106}, pages = {24 -- 35}, year = {2008}, language = {en} } @article{BengerBartschHegeetal.2006, author = {Benger, Werner and Bartsch, Hauke and Hege, Hans-Christian and Kitzler, Hagen and Shumilina, Anna and Werner, Annett}, title = {Visualizing neuronal structures in the human brain via Diffusion Tensor MRI}, series = {Int. Journal of Neuroscience}, volume = {116(4)}, journal = {Int. Journal of Neuroscience}, pages = {461 -- 514}, year = {2006}, language = {en} } @inproceedings{PapazovDercksenLameckeretal.2008, author = {Papazov, Chavdar and Dercksen, Vincent J. and Lamecker, Hans and Hege, Hans-Christian}, title = {Visualizing morphogenesis and growth by temporal interpolation of surface-based 3D atlases}, series = {Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging}, booktitle = {Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging}, doi = {10.1109/ISBI.2008.4541123}, pages = {824 -- 827}, year = {2008}, language = {en} } @inproceedings{SchmidtEhrenbergBaumHege2002, author = {Schmidt-Ehrenberg, Johannes and Baum, Daniel and Hege, Hans-Christian}, title = {Visualizing Dynamic Molecular Conformations}, series = {Proceedings of IEEE Visualization 2002}, booktitle = {Proceedings of IEEE Visualization 2002}, editor = {J. Moorhead, Robert and Gross, Markus and I. Joy, Kenneth}, publisher = {IEEE Computer Society Press}, address = {Boston MA, USA}, doi = {10.1109/VISUAL.2002.1183780}, pages = {235 -- 242}, year = {2002}, language = {en} } @article{BestHege2002, author = {Best, Christoph and Hege, Hans-Christian}, title = {Visualizing and Identifying Conformational Ensembles in Molecular Dynamics Trajectories}, series = {IEEE Computing in Science \& Engineering}, volume = {4(3)}, journal = {IEEE Computing in Science \& Engineering}, doi = {10.1109/5992.998642}, pages = {68 -- 75}, year = {2002}, language = {en} } @article{MayeWenckebachHege2006, author = {Maye, Alexander and Wenckebach, Thomas and Hege, Hans-Christian}, title = {Visualization, reconstruction, and integration of neuronal structures in digital brain atlases}, series = {Int. Journal of Neuroscience}, volume = {116(4)}, journal = {Int. Journal of Neuroscience}, pages = {431 -- 459}, year = {2006}, language = {en} } @inproceedings{KaehlerProhaskaHutanuetal.2005, author = {K{\"a}hler, Ralf and Prohaska, Steffen and Hutanu, Andrei and Hege, Hans-Christian}, title = {Visualization of time-dependent remote adaptive mesh refinement data}, series = {Proc. IEEE Visualization 2005}, booktitle = {Proc. IEEE Visualization 2005}, address = {Minneapolis, USA}, doi = {10.1109/VISUAL.2005.1532793}, pages = {175 -- 182}, year = {2005}, language = {en} } @article{KozlikovaKroneFalketal., author = {Kozl{\´i}kov{\´a}, Barbora and Krone, Michael and Falk, Martin and Lindow, Norbert and Baaden, Marc and Baum, Daniel and Viola, Ivan and Parulek, Julius and Hege, Hans-Christian}, title = {Visualization of Biomolecular Structures: State of the Art Revisited}, series = {Computer Graphics Forum}, volume = {36}, journal = {Computer Graphics Forum}, number = {8}, doi = {10.1111/cgf.13072}, pages = {178 -- 204}, abstract = {Structural properties of molecules are of primary concern in many fields. This report provides a comprehensive overview on techniques that have been developed in the fields of molecular graphics and visualization with a focus on applications in structural biology. The field heavily relies on computerized geometric and visual representations of three-dimensional, complex, large and time-varying molecular structures. The report presents a taxonomy that demonstrates which areas of molecular visualization have already been extensively investigated and where the field is currently heading. It discusses visualizations for molecular structures, strategies for efficient display regarding image quality and frame rate, covers different aspects of level of detail and reviews visualizations illustrating the dynamic aspects of molecular simulation data. The survey concludes with an outlook on promising and important research topics to foster further success in the development of tools that help to reveal molecular secrets.}, language = {en} } @inproceedings{KozlikovaKroneLindowetal.2015, author = {Kozlikova, Barbora and Krone, Michael and Lindow, Norbert and Falk, Martin and Baaden, Marc and Baum, Daniel and Viola, Ivan and Parulek, Julius and Hege, Hans-Christian}, title = {Visualization of Biomolecular Structures: State of the Art}, series = {EuroVis 2015 STARS Proceedings}, booktitle = {EuroVis 2015 STARS Proceedings}, doi = {10.2312/eurovisstar.20151112}, pages = {61 -- 81}, year = {2015}, abstract = {Structural properties of molecules are of primary concern in many fields. This report provides a comprehensive overview on techniques that have been developed in the fields of molecular graphics and visualization with a focus on applications in structural biology. The field heavily relies on computerized geometric and visual representations of three-dimensional, complex, large, and time-varying molecular structures. The report presents a taxonomy that demonstrates which areas of molecular visualization have already been extensively investigated and where the field is currently heading. It discusses visualizations for molecular structures, strategies for efficient display regarding image quality and frame rate, covers different aspects of level of detail, and reviews visualizations illustrating the dynamic aspects of molecular simulation data. The report concludes with an outlook on promising and important research topics to enable further success in advancing the knowledge about interaction of molecular structures.}, language = {en} } @misc{PfisterKaynigBothaetal.2012, author = {Pfister, Hanspeter and Kaynig, Verena and Botha, Charl and Bruckner, Stefan and Dercksen, Vincent J. and Hege, Hans-Christian and Roerdink, Jos}, title = {Visualization in Connectomics}, doi = {10.1007/978-1-4471-6497-5_21}, year = {2012}, language = {en} } @incollection{PfisterKaynigBothaetal.2014, author = {Pfister, Hanspeter and Kaynig, Verena and Botha, Charl P. and Bruckner, Stefan and Dercksen, Vincent J. and Hege, Hans-Christian and Roerdink, Jos B.T.M.}, title = {Visualization in Connectomics}, series = {Scientific Visualization - Uncertainty, Multifield, Biomedical, and Scalable Visualization}, booktitle = {Scientific Visualization - Uncertainty, Multifield, Biomedical, and Scalable Visualization}, editor = {Hansen, Charles D. and Chen, Min and Johnson, Christopher R. and Kaufman, Arie E. and Hagen, Hans}, publisher = {Springer}, isbn = {978-1-4471-6496-8}, doi = {10.1007/978-1-4471-6497-5_21}, pages = {221 -- 245}, year = {2014}, abstract = {Connectomics is a branch of neuroscience that attempts to create a connectome, i.e., a complete map of the neuronal system and all connections between neuronal structures. This representation can be used to understand how functional brain states emerge from their underlying anatomical structures and how dysfunction and neuronal diseases arise. We review the current state-of-the-art of visualization and image processing techniques in the field of connectomics and describe a number of challenges. After a brief summary of the biological background and an overview of relevant imaging modalities, we review current techniques to extract connectivity information from image data at macro-, meso- and microscales. We also discuss data integration and neural network modeling, as well as the visualization, analysis and comparison of brain networks.}, language = {en} } @book{HegeEds1997, author = {Hege, Hans-Christian and (Eds.), Konrad}, title = {Visualization and Mathematics - Experiments, Simulations and Environments}, publisher = {Springer-Verlag, Berlin/Heidelberg}, isbn = {ISBN 3-540-61269-6}, year = {1997}, language = {en} } @inproceedings{StallingHegeHoellerer1995, author = {Stalling, Detlev and Hege, Hans-Christian and H{\"o}llerer, Tobias}, title = {Visualization and 3D-Interaction for Hyperthermia Treatment Planning}, series = {Proc. CAR 95 Computer Assisted Radiology, 9th International Symposium and Exhibition}, booktitle = {Proc. CAR 95 Computer Assisted Radiology, 9th International Symposium and Exhibition}, address = {Berlin}, pages = {1216 -- 1222}, year = {1995}, language = {en} } @misc{PolthierSullivanZiegleretal., author = {Polthier, Konrad and Sullivan, John and Ziegler, G{\"u}nter M. and Hege, Hans-Christian}, title = {Visualization}, series = {MATHEON - Mathematics for Key Technologies}, journal = {MATHEON - Mathematics for Key Technologies}, editor = {Deuflhard, Peter and et al.,}, publisher = {European Mathematical Society}, isbn = {978-3-03719-137-8}, doi = {10.4171/137}, pages = {335 -- 339}, language = {en} } @article{ZachowMuiggHildebrandtetal.2009, author = {Zachow, Stefan and Muigg, Philipp and Hildebrandt, Thomas and Doleisch, Helmut and Hege, Hans-Christian}, title = {Visual Exploration of Nasal Airflow}, series = {IEEE Transactions on Visualization and Computer Graphics}, volume = {15}, journal = {IEEE Transactions on Visualization and Computer Graphics}, number = {8}, doi = {10.1109/TVCG.2009.198}, pages = {1407 -- 1414}, year = {2009}, language = {en} } @article{ProhaskaHegeGiehletal.2002, author = {Prohaska, Steffen and Hege, Hans-Christian and Giehl, Michael and Gowin, Wolfgang}, title = {Visual Analysis of Trabecular Bone Structure}, series = {Journal of Gravitational Physiology}, volume = {9 (1)}, journal = {Journal of Gravitational Physiology}, pages = {171 -- 172}, year = {2002}, language = {en} } @article{HegeKoppitzMarquardtetal.2011, author = {Hege, Hans-Christian and Koppitz, Michael and Marquardt, Falko and McDonald, Chris and Mielack, Christopher}, title = {Visual Analysis of Quantum Physics Data}, series = {Quantum Dynamic Imaging}, journal = {Quantum Dynamic Imaging}, publisher = {Springer}, doi = {10.1007/978-1-4419-9491-2_6}, pages = {71 -- 87}, year = {2011}, language = {en} } @inproceedings{Hege, author = {Hege, Hans-Christian}, title = {Visual analysis of molecular dynamics data using geometric and topological methods}, series = {Forum "Math for Industry" 2014}, volume = {57}, booktitle = {Forum "Math for Industry" 2014}, publisher = {Institute of Mathematics for Industry, Kyushu University}, address = {Fukuoka, Japan}, pages = {45 -- 46}, language = {en} } @inproceedings{SchmidtEhrenbergHege2005, author = {Schmidt-Ehrenberg, Johannes and Hege, Hans-Christian}, title = {Visual analysis of molecular conformations by means of a dynamic density mixture model}, series = {Computational Life Sciences: First International Symposium, CompLife 2005}, volume = {3695}, booktitle = {Computational Life Sciences: First International Symposium, CompLife 2005}, publisher = {Springer}, address = {Konstanz, Germany}, pages = {229 -- 240}, year = {2005}, language = {en} } @article{KroneKozlikovaLindowetal.2016, author = {Krone, Michael and Kozl{\´i}kov{\´a}, Barbora and Lindow, Norbert and Baaden, Marc and Baum, Daniel and Parulek, Julius and Hege, Hans-Christian and Viola, Ivan}, title = {Visual Analysis of Biomolecular Cavities: State of the Art}, series = {Computer Graphics Forum}, volume = {35}, journal = {Computer Graphics Forum}, number = {3}, issn = {1467-8659}, doi = {10.1111/cgf.12928}, pages = {527 -- 551}, year = {2016}, abstract = {In this report we review and structure the branch of molecular visualization that is concerned with the visual analysis of cavities in macromolecular protein structures. First the necessary background, the domain terminology, and the goals of analytical reasoning are introduced. Based on a comprehensive collection of relevant research works, we present a novel classification for cavity detection approaches and structure them into four distinct classes: grid-based, Voronoi-based, surface-based, and probe-based methods. The subclasses are then formed by their combinations. We match these approaches with corresponding visualization technologies starting with direct 3D visualization, followed with non-spatial visualization techniques that for example abstract the interactions between structures into a relational graph, straighten the cavity of interest to see its profile in one view, or aggregate the time sequence into a single contour plot. We also discuss the current state of methods for the visual analysis of cavities in dynamic data such as molecular dynamics simulations. Finally, we give an overview of the most common tools that are actively developed and used in the structural biology and biochemistry research. Our report is concluded by an outlook on future challenges in the field.}, language = {en} } @inproceedings{BengerHegeHeusler2000, author = {Benger, Werner and Hege, Hans-Christian and Heusler, Stefan}, title = {Visions of Numerical Relativity}, series = {Proceedings of the 3d International Conference on the Interaction of Art and Fluid Mechanics (SCART2000)}, booktitle = {Proceedings of the 3d International Conference on the Interaction of Art and Fluid Mechanics (SCART2000)}, publisher = {Kluwer Academic Publishers}, address = {ETH Z{\"u}rich Zwitzerland}, pages = {239 -- 246}, year = {2000}, language = {en} } @inproceedings{StoppelHegeWiebel, author = {Stoppel, Sergej and Hege, Hans-Christian and Wiebel, Alexander}, title = {Visibility-driven depth determination of surface patches in direct volume rendering}, series = {EuroVis - Short Papers 2014}, booktitle = {EuroVis - Short Papers 2014}, doi = {10.2312/eurovisshort.20141164}, pages = {97 -- 101}, abstract = {This paper presents an algorithm called surfseek for selecting surfaces on the most visible features in direct volume rendering (DVR). The algorithm is based on a previously published technique (WYSIWYP) for picking 3D locations in DVR. The new algorithm projects a surface patch on the DVR image, consisting of multiple rays. For each ray the algorithm uses WYSIWYP or a variant of it to find the candidates for the most visible locations along the ray. Using these candidates the algorithm constructs a graph and computes a minimum cut on this graph. The minimum cut represents a visible and typically rather smooth surface. In the last step the selected surface is displayed. We provide examples for results using artificially generated and real-world data sets.}, language = {en} } @misc{Hege2000, author = {Hege, Hans-Christian}, title = {Virtuelle Experimente Sieben H{\"u}gel - Bilder und Zeichen des 21. Jahrhunderts}, year = {2000}, language = {en} } @article{MahnkeArltBaumetal., author = {Mahnke, Heinz-Eberhard and Arlt, Tobias and Baum, Daniel and Hege, Hans-Christian and Herter, Felix and Lindow, Norbert and Manke, Ingo and Siopi, Tzulia and Menei, Eve and Etienne, Marc and Lepper, Verena}, title = {Virtual unfolding of folded papyri}, series = {Journal of Cultural Heritage}, volume = {41}, journal = {Journal of Cultural Heritage}, publisher = {Elsevier}, doi = {10.1016/j.culher.2019.07.007}, pages = {264 -- 269}, abstract = {The historical importance of ancient manuscripts is unique since they provide information about the heritage of ancient cultures. Often texts are hidden in rolled or folded documents. Due to recent impro- vements in sensitivity and resolution, spectacular disclosures of rolled hidden texts were possible by X-ray tomography. However, revealing text on folded manuscripts is even more challenging. Manual unfolding is often too risky in view of the fragile condition of fragments, as it can lead to the total loss of the document. X-ray tomography allows for virtual unfolding and enables non-destructive access to hid- den texts. We have recently demonstrated the procedure and tested unfolding algorithms on a mockup sample. Here, we present results on unfolding ancient papyrus packages from the papyrus collection of the Mus{\´e}e du Louvre, among them objects folded along approximately orthogonal folding lines. In one of the packages, the first identification of a word was achieved, the Coptic word for "Lord".}, language = {en} } @inproceedings{GladilinZachowDeuflhardetal.2001, author = {Gladilin, Evgeny and Zachow, Stefan and Deuflhard, Peter and Hege, Hans-Christian}, title = {Virtual Fibers: A Robust Approach for Muscle Simulation}, series = {IX Mediterranean Conference on Medical and Biological Engineering and Computing (MEDICON)}, booktitle = {IX Mediterranean Conference on Medical and Biological Engineering and Computing (MEDICON)}, address = {Pula, Croatia}, pages = {961 -- 964}, year = {2001}, language = {en} } @inproceedings{ArltLindowBaumetal., author = {Arlt, Tobias and Lindow, Norbert and Baum, Daniel and Hilger, Andre and Mahnke, Ingo and Hege, Hans-Christian and Lepper, Verena and Siopi, Tzulia and Mahnke, Heinz.Eberhard}, title = {Virtual Access to Hidden Texts - Study of Ancient Papyri}, series = {Eighth Joint BER II and BESSY II User Meeting, Dec 7-9, 2016, Berlin, Germany}, booktitle = {Eighth Joint BER II and BESSY II User Meeting, Dec 7-9, 2016, Berlin, Germany}, abstract = {When physical unfolding/unrolling of papyri is not possible or too dangerous for preserving the precious object, tomographic approaches may be the ap- propriate alternative. Requirements are the resolution and the contrast to distinguish writing and substrate. The steps to be performed are the following: (1) Select the object of interest (archaeological arguments, cultural back- ground of the object, etc.). (2) Find the proper physical procedure, especially with respect to contrast, take the tomographic data, e.g. by absorption x-ray tomography. (3) Apply mathematical unfolding transformations to the tomographic data, in order to obtain a 2d-planar reconstruction of text.}, language = {en} } @book{HegePolthier1998, author = {Hege, Hans-Christian and Polthier, Konrad}, title = {VideoMath - Festival at ICM 98}, series = {Springer VideoMath}, journal = {Springer VideoMath}, isbn = {978-3-540-21385-7}, year = {1998}, language = {en} } @inproceedings{HegeStueben1991, author = {Hege, Hans-Christian and St{\"u}ben, Hinnerk}, title = {Vectorization and Parallelization of Irregular Problems via Graph Coloring}, series = {Proc. of the ACM Int. Conf. on Supercomputing}, booktitle = {Proc. of the ACM Int. Conf. on Supercomputing}, address = {Cologne}, doi = {10.1145/109025.109042}, pages = {47 -- 56}, year = {1991}, language = {en} } @inproceedings{GladilinZachowDeuflhardetal.2001, author = {Gladilin, Evgeny and Zachow, Stefan and Deuflhard, Peter and Hege, Hans-Christian}, title = {Validierung eines linear elastischen Modells f{\"u}r die Weichgewebesimulation in der Mund-Kiefer-Gesichtschirurgie}, series = {Bildverarbeitung f{\"u}r die Medizin (BVM)}, booktitle = {Bildverarbeitung f{\"u}r die Medizin (BVM)}, address = {L{\"u}beck, Germany}, pages = {57 -- 61}, year = {2001}, language = {en} } @inproceedings{GladilinZachowDeuflhardetal.2001, author = {Gladilin, Evgeny and Zachow, Stefan and Deuflhard, Peter and Hege, Hans-Christian}, title = {Validation of a Linear Elastic Model for Soft Tissue Simulation in Craniofacial Surgery}, series = {Proc. SPIE Medical Imaging 2001}, volume = {4319}, booktitle = {Proc. SPIE Medical Imaging 2001}, editor = {Mun, Seong}, address = {San Diego, USA}, doi = {10.1117/12.428061}, pages = {27 -- 35}, year = {2001}, language = {en} } @inproceedings{SagnolHegeWeiser, author = {Sagnol, Guillaume and Hege, Hans-Christian and Weiser, Martin}, title = {Using sparse kernels to design computer experiments with tunable precision}, series = {22nd Intern. Conf. on Computational Statistics - COMPSTAT 2016, Oviedo, Spain, 23-26 August 2016, Proceedings ISBN 978-90-73592-36-0}, booktitle = {22nd Intern. Conf. on Computational Statistics - COMPSTAT 2016, Oviedo, Spain, 23-26 August 2016, Proceedings ISBN 978-90-73592-36-0}, pages = {397 -- 408}, language = {en} } @incollection{PoethkowHege2012, author = {P{\"o}thkow, Kai and Hege, Hans-Christian}, title = {Uncertainty Propagation in DT-MRI Anisotropy Isosurface Extraction}, series = {New Developments in the Visualization and Processing of Tensor Fields}, booktitle = {New Developments in the Visualization and Processing of Tensor Fields}, editor = {Laidlaw, David and Vilanova, Anna}, publisher = {Springer}, address = {Berlin}, pages = {209 -- 225}, year = {2012}, language = {en} } @article{OttoGermerHegeetal.2010, author = {Otto, Mathias and Germer, Tobias and Hege, Hans-Christian and Theisel, Holger}, title = {Uncertain 2D Vector Field Topology}, series = {Comput. Graph. Forum}, volume = {29}, journal = {Comput. Graph. Forum}, doi = {10.1111/j.1467-8659.2009.01604.x}, pages = {347 -- 356}, year = {2010}, language = {en} } @article{KastenReininghausHotzetal.2011, author = {Kasten, Jens and Reininghaus, Jan and Hotz, Ingrid and Hege, Hans-Christian}, title = {Two-Dimensional Time-Dependent Vortex Regions Based on the Acceleration Magnitude}, series = {IEEE Transactions on Visualization and Computer Graphics}, volume = {17}, journal = {IEEE Transactions on Visualization and Computer Graphics}, number = {12}, pages = {2080 -- 2087target}, year = {2011}, language = {en} } @article{GoubergritsOsmanMevertetal., author = {Goubergrits, Leonid and Osman, Jan and Mevert, Ricardo and Kertzscher, Ulrich and P{\"o}thkow, Kai and Hege, Hans-Christian}, title = {Turbulence in blood damage modeling}, series = {The International Journal of Artificial Organs}, volume = {39}, journal = {The International Journal of Artificial Organs}, number = {4}, doi = {10.5301/ijao.5000476}, pages = {147 -- 210}, abstract = {Purpose: To account for the impact of turbulence in blood damage modeling, a novel approach based on the generation of instantaneous flow fields from RANS simulations is proposed. Methods: Turbulent flow in a bileaflet mechanical heart valve was simulated using RANS-based (SST k-ω) flow solver using FLUENT 14.5. The calculated Reynolds shear stress (RSS) field is transformed into a set of divergence-free random vector fields representing turbulent velocity fluctuations using procedural noise functions. To consider the random path of the blood cells, instantaneous flow fields were computed for each time step by summation of RSS-based divergence-free random and mean velocity fields. Using those instantaneous flow fields, instantaneous pathlines and corresponding point-wise instantaneous shear stresses were calculated. For a comparison, averaged pathlines based on mean velocity field and respective viscous shear stresses together with RSS values were calculated. Finally, the blood damage index (hemolysis) was integrated along the averaged and instantaneous pathlines using a power law approach and then compared. Results: Using RSS in blood damage modeling without a correction factor overestimates damaging stress and thus the blood damage (hemolysis). Blood damage histograms based on both presented approaches differ. Conclusions: A novel approach to calculate blood damage without using RSS as a damaging parameter is established. The results of our numerical experiment support the hypothesis that the use of RSS as a damaging parameter should be avoided.}, language = {en} } @article{TorsneyWeirSaadMoelleretal.2011, author = {Torsney-Weir, Thomas and Saad, Ahmed and M{\"o}ller, Torsten and Hege, Hans-Christian and Weber, Britta and Verbavatz, Jean-Marc}, title = {Tuner: Principled Parameter Finding for Image Segmentation Algorithms Using Visual Response Surface Exploration}, series = {IEEE Trans. Vis. Comput. Graph.}, volume = {17}, journal = {IEEE Trans. Vis. Comput. Graph.}, number = {12}, pages = {1892 -- 1901}, year = {2011}, language = {en} } @inproceedings{KuhnLindowGuentheretal.2013, author = {Kuhn, Alexander and Lindow, Norbert and G{\"u}nther, Tobias and Wiebel, Alexander and Theisel, Holger and Hege, Hans-Christian}, title = {Trajectory Density Projection for Vector Field Visualization}, series = {EuroVis 2013, short papers. M. Hlawitschka, Tino Weinkauf (eds.)}, booktitle = {EuroVis 2013, short papers. M. Hlawitschka, Tino Weinkauf (eds.)}, doi = {10.2312/PE.EuroVisShort.EuroVisShort2013.031-035}, pages = {31 -- 35}, year = {2013}, language = {en} } @inproceedings{ZachowGladilinHegeetal.2002, author = {Zachow, Stefan and Gladilin, Evgeny and Hege, Hans-Christian and Deuflhard, Peter}, title = {Towards Patient Specific, Anatomy Based Simulation of Facial Mimics for Surgical Nerve Rehabilitation}, series = {Computer Assisted Radiology and Surgery (CARS)}, booktitle = {Computer Assisted Radiology and Surgery (CARS)}, publisher = {Springer Verlag}, pages = {3 -- 6}, year = {2002}, language = {en} } @inproceedings{DworzakLameckervonBergetal.2008, author = {Dworzak, Jalda and Lamecker, Hans and von Berg, Jens and Klinder, Tobias and Lorenz, Cristian and Kainm{\"u}ller, Dagmar and Seim, Heiko and Hege, Hans-Christian and Zachow, Stefan}, title = {Towards model-based 3-D reconstruction of the human rib cage from radiographs}, series = {Proc. 7. Jahrestagung der Deutschen Gesellschaft f{\"u}r Computer-Roboterassistierte Chirurgie (CURAC)}, booktitle = {Proc. 7. Jahrestagung der Deutschen Gesellschaft f{\"u}r Computer-Roboterassistierte Chirurgie (CURAC)}, pages = {193 -- 196}, year = {2008}, language = {en} } @article{HegeWeinkaufProhaskaetal.2005, author = {Hege, Hans-Christian and Weinkauf, Tino and Prohaska, Steffen and Hutanu, Andrei}, title = {Towards distributed visualization and analysis of large flow data}, series = {JSME International Journal, Series B}, volume = {48 (2)}, journal = {JSME International Journal, Series B}, pages = {241 -- 246}, year = {2005}, language = {en} } @incollection{DercksenBruessStallingetal.2008, author = {Dercksen, Vincent J. and Br{\"u}ß, Cornelia and Stalling, Detlev and Gubatz, Sabine and Seiffert, Udo and Hege, Hans-Christian}, title = {Towards automatic generation of 3D models of biological objects based on serial sections}, series = {Visualization in Medicine and Life Sciences}, booktitle = {Visualization in Medicine and Life Sciences}, publisher = {Springer-Verlag Berlin Heidelberg}, doi = {10.1007/978-3-540-72630-2}, pages = {3 -- 25}, year = {2008}, language = {en} }