TY - JOUR A1 - Ebigbo, Alanna A1 - Mendel, Robert A1 - Probst, Andreas A1 - Manzeneder, Johannes A1 - Souza Jr., Luis Antonio de A1 - Papa, João Paulo A1 - Palm, Christoph A1 - Messmann, Helmut T1 - Computer-aided diagnosis using deep learning in the evaluation of early oesophageal adenocarcinoma JF - GuT N2 - Computer-aided diagnosis using deep learning (CAD-DL) may be an instrument to improve endoscopic assessment of Barrett’s oesophagus (BE) and early oesophageal adenocarcinoma (EAC). Based on still images from two databases, the diagnosis of EAC by CAD-DL reached sensitivities/specificities of 97%/88% (Augsburg data) and 92%/100% (Medical Image Computing and Computer-Assisted Intervention [MICCAI] data) for white light (WL) images and 94%/80% for narrow band images (NBI) (Augsburg data), respectively. Tumour margins delineated by experts into images were detected satisfactorily with a Dice coefficient (D) of 0.72. This could be a first step towards CAD-DL for BE assessment. If developed further, it could become a useful adjunctive tool for patient management. KW - Speiseröhrenkrebs KW - Diagnose KW - Computerunterstütztes Verfahren KW - Maschinelles Lernen Y1 - 2019 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:bvb:898-opus4-68 N1 - Corresponding authors: Alanna Ebigbo and Christoph Palm VL - 68 IS - 7 SP - 1143 EP - 1145 PB - British Society of Gastroenterology ER - TY - JOUR A1 - Ebigbo, Alanna A1 - Palm, Christoph A1 - Probst, Andreas A1 - Mendel, Robert A1 - Manzeneder, Johannes A1 - Prinz, Friederike A1 - Souza Jr., Luis Antonio de A1 - Papa, João Paulo A1 - Siersema, Peter A1 - Messmann, Helmut T1 - A technical review of artificial intelligence as applied to gastrointestinal endoscopy: clarifying the terminology JF - Endoscopy International Open N2 - The growing number of publications on the application of artificial intelligence (AI) in medicine underlines the enormous importance and potential of this emerging field of research. In gastrointestinal endoscopy, AI has been applied to all segments of the gastrointestinal tract most importantly in the detection and characterization of colorectal polyps. However, AI research has been published also in the stomach and esophagus for both neoplastic and non-neoplastic disorders. The various technical as well as medical aspects of AI, however, remain confusing especially for non-expert physicians. This physician-engineer co-authored review explains the basic technical aspects of AI and provides a comprehensive overview of recent publications on AI in gastrointestinal endoscopy. Finally, a basic insight is offered into understanding publications on AI in gastrointestinal endoscopy. KW - Diagnose KW - Maschinelles Lernen KW - Gastroenterologie KW - Künstliche Intelligenz KW - Barrett's esophagus KW - Deep learning Y1 - 2019 U6 - https://doi.org/10.1055/a-1010-5705 VL - 07 IS - 12 SP - 1616 EP - 1623 PB - Georg Thieme Verlag CY - Stuttgart ER - TY - JOUR A1 - Ebigbo, Alanna A1 - Mendel, Robert A1 - Rückert, Tobias A1 - Schuster, Laurin A1 - Probst, Andreas A1 - Manzeneder, Johannes A1 - Prinz, Friederike A1 - Mende, Matthias A1 - Steinbrück, Ingo A1 - Faiss, Siegbert A1 - Rauber, David A1 - Souza Jr., Luis Antonio de A1 - Papa, João Paulo A1 - Deprez, Pierre A1 - Oyama, Tsuneo A1 - Takahashi, Akiko A1 - Seewald, Stefan A1 - Sharma, Prateek A1 - Byrne, Michael F. A1 - Palm, Christoph A1 - Messmann, Helmut T1 - Endoscopic prediction of submucosal invasion in Barrett’s cancer with the use of Artificial Intelligence: A pilot Study JF - Endoscopy N2 - Background and aims: The accurate differentiation between T1a and T1b Barrett’s cancer has both therapeutic and prognostic implications but is challenging even for experienced physicians. We trained an Artificial Intelligence (AI) system on the basis of deep artificial neural networks (deep learning) to differentiate between T1a and T1b Barrett’s cancer white-light images. Methods: Endoscopic images from three tertiary care centres in Germany were collected retrospectively. A deep learning system was trained and tested using the principles of cross-validation. A total of 230 white-light endoscopic images (108 T1a and 122 T1b) was evaluated with the AI-system. For comparison, the images were also classified by experts specialized in endoscopic diagnosis and treatment of Barrett’s cancer. Results: The sensitivity, specificity, F1 and accuracy of the AI-system in the differentiation between T1a and T1b cancer lesions was 0.77, 0.64, 0.73 and 0.71, respectively. There was no statistically significant difference between the performance of the AI-system and that of human experts with sensitivity, specificity, F1 and accuracy of 0.63, 0.78, 0.67 and 0.70 respectively. Conclusion: This pilot study demonstrates the first multicenter application of an AI-based system in the prediction of submucosal invasion in endoscopic images of Barrett’s cancer. AI scored equal to international experts in the field, but more work is necessary to improve the system and apply it to video sequences and in a real-life setting. Nevertheless, the correct prediction of submucosal invasion in Barret´s cancer remains challenging for both experts and AI. KW - Maschinelles Lernen KW - Neuronales Netz KW - Speiseröhrenkrebs KW - Diagnose KW - Artificial Intelligence KW - Machine learning KW - Adenocarcinoma KW - Barrett’s cancer KW - submucosal invasion Y1 - 2021 U6 - https://doi.org/10.1055/a-1311-8570 VL - 53 IS - 09 SP - 878 EP - 883 PB - Thieme CY - Stuttgart ER - TY - JOUR A1 - Ebigbo, Alanna A1 - Mendel, Robert A1 - Probst, Andreas A1 - Manzeneder, Johannes A1 - Prinz, Friederike A1 - Souza Jr., Luis Antonio de A1 - Papa, João Paulo A1 - Palm, Christoph A1 - Messmann, Helmut T1 - Real-time use of artificial intelligence in the evaluation of cancer in Barrett’s oesophagus JF - Gut N2 - Based on previous work by our group with manual annotation of visible Barrett oesophagus (BE) cancer images, a real-time deep learning artificial intelligence (AI) system was developed. While an expert endoscopist conducts the endoscopic assessment of BE, our AI system captures random images from the real-time camera livestream and provides a global prediction (classification), as well as a dense prediction (segmentation) differentiating accurately between normal BE and early oesophageal adenocarcinoma (EAC). The AI system showed an accuracy of 89.9% on 14 cases with neoplastic BE. KW - Speiseröhrenkrankheit KW - Diagnose KW - Maschinelles Lernen KW - Barrett's esophagus KW - Deep learning KW - real-time Y1 - 2020 U6 - https://doi.org/10.1136/gutjnl-2019-319460 VL - 69 IS - 4 SP - 615 EP - 616 PB - BMJ CY - London ER - TY - GEN A1 - Ebigbo, Alanna A1 - Mendel, Robert A1 - Probst, Andreas A1 - Manzeneder, Johannes A1 - Souza Jr., Luis Antonio de A1 - Papa, João Paulo A1 - Palm, Christoph A1 - Messmann, Helmut T1 - Artificial Intelligence in Early Barrett's Cancer: The Segmentation Task T2 - Endoscopy N2 - Aims: The delineation of outer margins of early Barrett's cancer can be challenging even for experienced endoscopists. Artificial intelligence (AI) could assist endoscopists faced with this task. As of date, there is very limited experience in this domain. In this study, we demonstrate the measure of overlap (Dice coefficient = D) between highly experienced Barrett endoscopists and an AI system in the delineation of cancer margins (segmentation task). Methods: An AI system with a deep convolutional neural network (CNN) was trained and tested on high-definition endoscopic images of early Barrett's cancer (n = 33) and normal Barrett's mucosa (n = 41). The reference standard for the segmentation task were the manual delineations of tumor margins by three highly experienced Barrett endoscopists. Training of the AI system included patch generation, patch augmentation and adjustment of the CNN weights. Then, the segmentation results from patch classification and thresholding of the class probabilities. Segmentation results were evaluated using the Dice coefficient (D). Results: The Dice coefficient (D) which can range between 0 (no overlap) and 1 (complete overlap) was computed only for images correctly classified by the AI-system as cancerous. At a threshold of t = 0.5, a mean value of D = 0.72 was computed. Conclusions: AI with CNN performed reasonably well in the segmentation of the tumor region in Barrett's cancer, at least when compared with expert Barrett's endoscopists. AI holds a lot of promise as a tool for better visualization of tumor margins but may need further improvement and enhancement especially in real-time settings. KW - Speiseröhrenkrankheit KW - Maschinelles Lernen KW - Barrett's esphagus KW - Deep Learning KW - Segmentation Y1 - 2019 U6 - https://doi.org/10.1055/s-0039-1681187 VL - 51 IS - 04 SP - 6 PB - Georg Thieme Verlag CY - Stuttgart ER -