@article{MerkSchlotzFalter, author = {Merk, Josef and Schlotz, Wolff and Falter, Thomas}, title = {The Motivational Value Systems Questionnaire (MVSQ): Psychometric Analysis Using a Forced Choice Thurstonian IRT Model}, series = {Frontiers in Psychology}, volume = {8}, journal = {Frontiers in Psychology}, number = {1626}, doi = {10.3389/fpsyg.2017.01626}, abstract = {This study presents a new measure of value systems, the Motivational Value Systems Questionnaire (MVSQ), which is based on a theory of value systems by psychologist Clare W. Graves. The purpose of the instrument is to help people identify their personal hierarchies of value systems and thus become more aware of what motivates and demotivates them in work-related contexts. The MVSQ is a forced-choice (FC) measure, making it quicker to complete and more difficult to intentionally distort, but also more difficult to assess its psychometric properties due to ipsativity of FC data compared to rating scales. To overcome limitations of ipsative data, a Thurstonian IRT (TIRT) model was fitted to the questionnaire data, based on a broad sample of N = 1,217 professionals and students. Comparison of normative (IRT) scale scores and ipsative scores suggested that MVSQ IRT scores are largely freed from restrictions due to ipsativity and thus allow interindividual comparison of scale scores. Empirical reliability was estimated using a sample-based simulation approach which showed acceptable and good estimates and, on average, slightly higher test-retest reliabilities. Further, validation studies provided evidence on both construct validity and criterion-related validity. Scale score correlations and associations of scores with both age and gender were largely in line with theoretically - and empirically-based expectations, and results of a multitrait-multimethod analysis supports convergent and discriminant construct validity. Criterion validity was assessed by examining the relation of value system preferences to departmental affiliation which revealed significant relations in line with prior hypothesizing. These findings demonstrate the good psychometric properties of the MVSQ and support its application in the assessment of value systems in work-related contexts.}, language = {en} } @article{MichalkSchoettkerKoenigerProbstetal., author = {Michalk, Katrin and Schoettker-Koeniger, Thomas and Probst, Annette and Luedtke, Kerstin}, title = {Development of a Consensus about Important Outcomes in Physiotherapy for Neck Pain - A Delphi Study}, series = {physioscience}, volume = {16}, journal = {physioscience}, number = {03}, publisher = {Thieme}, doi = {10.1055/a-1110-2096}, pages = {111 -- 120}, abstract = {Background Neck pain is a frequent reason to seek physiotherapy treatment. Evaluating the results of the treatment is often not routine practice. A core outcome set (COS) for physiotherapists is currently lacking. Objective To develop a consensus on important outcome domains that should be used by physiotherapists to measure the outcomes of patients with nonspecific neck pain. Method Initially a systematic research was carried out to identify outcome domains. Subsequently in a Delphi survey physiotherapists and patients rated the importance of outcome domains using a 9-point rating scale in round 1 and then re-rated outcomes in round 2 and 3 after reviewing other respondents' suggestions. For each outcome measure, central tendency and measures of dispersion were calculated. Results 62 physiotherapists and nine patients participated in the first round of the Delphi survey. Further Delphi rounds with the patients were stopped due to the low number of participants. Patients considered "range of motion of the cervical spine in different directions of movement" and "health-related quality of life" as important outcomes. 50 (81\%) and 37 (74\%) physiotherapists completed the second and third round of the Delphi survey. The outcome domains that met the inclusion criteria for the consensus were "problems with everyday activities due to the neck pain" and "ability to self-management/self-responsible handling with the neck pain". Conclusion A first consensus was reached on important outcome domains from the physiotherapist's point of view. For the development of a COS future research is required e.g. to confirm the outcome domains and to include the patient's point of view.}, language = {en} } @inproceedings{MiddelPalmErdt, author = {Middel, Luise and Palm, Christoph and Erdt, Marius}, title = {Synthesis of Medical Images Using GANs}, series = {Uncertainty for safe utilization of machine learning in medical imaging and clinical image-based procedures. First International Workshop, UNSURE 2019, and 8th International Workshop, CLIP 2019, held in conjunction with MICCAI 2019, Shenzhen, China, October 17, 2019}, booktitle = {Uncertainty for safe utilization of machine learning in medical imaging and clinical image-based procedures. First International Workshop, UNSURE 2019, and 8th International Workshop, CLIP 2019, held in conjunction with MICCAI 2019, Shenzhen, China, October 17, 2019}, publisher = {Springer Nature}, address = {Cham}, isbn = {978-3-030-32688-3}, issn = {0302-9743}, doi = {10.1007/978-3-030-32689-0_13}, pages = {125 -- 134}, abstract = {The success of artificial intelligence in medicine is based on the need for large amounts of high quality training data. Sharing of medical image data, however, is often restricted by laws such as doctor-patient confidentiality. Although there are publicly available medical datasets, their quality and quantity are often low. Moreover, datasets are often imbalanced and only represent a fraction of the images generated in hospitals or clinics and can thus usually only be used as training data for specific problems. The introduction of generative adversarial networks (GANs) provides a mean to generate artificial images by training two convolutional networks. This paper proposes a method which uses GANs trained on medical images in order to generate a large number of artificial images that could be used to train other artificial intelligence algorithms. This work is a first step towards alleviating data privacy concerns and being able to publicly share data that still contains a substantial amount of the information in the original private data. The method has been evaluated on several public datasets and quantitative and qualitative tests showing promising results.}, subject = {Neuronale Netze}, language = {en} } @article{MilewskiHaug, author = {Milewski, Nadja and Haug, Sonja}, title = {At risk of reproductive disadvantage? Exploring fertility awareness among migrant women in Germany}, series = {Reproductive Biomedicine \& Society Online}, volume = {14}, journal = {Reproductive Biomedicine \& Society Online}, publisher = {Elsevier}, doi = {10.1016/j.rbms.2021.11.007}, pages = {226 -- 238}, abstract = {This study examined awareness about fertility among immigrant women and non-migrants in Germany. The social relevance of infertility and fertility treatment is increasing in Western countries due to continually low overall birth rates, a high rate of childlessness, and a gap between the desired and actual numbers of children. While there is growing interest in infertility and reproductive medicine in general, previous studies have rarely included immigrant or ethnic minorities in Europe. This study investigated whether knowledge on the age-related fertility decline (ARFD) varies between migrant groups and the majority group, and the role of education. Working hypotheses were drawn from theoretical considerations on frameworks of migrant assimilation. The analysis was based on data collected in a social science pilot study on reproductive medicine, representative of the general population ('NeWiRe' 2014-2015). The sample included 962 women aged 18-50 years living in Germany. Approximately 81\% of the sample were immigrants who originated from Turkey, Poland, the Balkan countries or countries of the (post-Soviet) Commonwealth of Independent States. While rather poor overall, knowledge on ARFD was found to be significantly lower in the migrant groups compared with the majority group. This minority-group disadvantage cannot be explained by sociodemographic or cultural variables. Future research should include minority groups in empirical studies on awareness about fertility in order to better understand the causes of this disadvantage, and the potential reproductive needs of migrants.}, language = {en} } @article{Mnich, author = {Mnich, Carina}, title = {Is there Europeanization of physical activity promotion?}, series = {Health policy}, volume = {123}, journal = {Health policy}, number = {3}, publisher = {Elsevier}, doi = {10.1016/j.healthpol.2019.01.004}, pages = {317 -- 326}, abstract = {Physical inactivity is a problem in Europe, contributing to various non-communicable diseases (NCDs). While health sciences offer data and models for preventing the development of NCDs through health promotion, they do not explain the dynamics between the different institutions and actors in the health field. Neofunctionalism refers to these different actors and suggests that their interaction leads to the construction of a supranational authority, allowing the actors to cooperate on common policies, rules and institutions, resulting in integration and Europeanization. Indeed, there are a variety of European Union (EU) institutions and policies concerned with physical activity (PA), however, the purpose of this paper is to analyze if Europeanization and integration are happening in PA promotion, through the lens of neofunctionalism. Analysis uses process tracing for investigating the emergence of PA on the EU agenda, the legal background, existing policies and institutions. Findings indicate that Europeanization and integration of PA promotion are happening, although the opportunity for actions of the EU are restricted to voluntary actions of the EU Member States due to the agreements in the Treaty of Lisbon. This only allows the EU institutions to apply soft law approaches on PA promotion, which seems to be implemented in some Member States despite its non-binding character. The findings are discussed and further implications for public health professionals and policies outlined.}, language = {en} } @article{MoragKieningerEissnertetal., author = {Morag, Sarah and Kieninger, Martin and Eissnert, Christoph and Auer, Simon and Dendorfer, Sebastian and Popp, Daniel and Hoffmann, Johannes and Kieninger, B{\"a}rbel}, title = {Comparison of different techniques for prehospital cervical spine immobilization: Biomechanical measurements with a wireless motion capture system}, series = {PLOS ONE}, volume = {18}, journal = {PLOS ONE}, number = {11}, publisher = {PLOS}, address = {San Francisco, California}, doi = {10.1371/journal.pone.0292300}, pages = {1 -- 14}, language = {en} } @article{MuehlingSandriesserDendorferetal., author = {M{\"u}hling, Mischa and Sandriesser, Sabrina and Dendorfer, Sebastian and Augat, Peter}, title = {Assessment of implant internal stresses under physiological femoral loading: Translation to a simplified bending load model}, series = {Journal of Biomechanics}, journal = {Journal of Biomechanics}, number = {112229}, publisher = {Elsevier}, issn = {1873-2380}, doi = {10.1016/j.jbiomech.2024.112229}, pages = {17}, abstract = {The success of surgical treatment for fractures hinges on various factors, notably accurate surgical indication. The process of developing and certifying a new osteosynthesis device is a lengthy and costly process that requires multiple cycles of review and validation. Current methods, however, often rely on predecessor standards rather than physiological loads in specific anatomical locations. This study aimed to determine actual loads experienced by an osteosynthesis plate, exemplified by a standard locking plate for the femoral shaft, utilizing finite elements analysis (FEA) and to obtain the bending moments for implant development standard tests. A protocol was developed, involving the creation and validation of a fractured femur model fixed with a locking plate, mechanical testing, and FEA. The model's validation demonstrated exceptional accuracy in predicting deformations, and the FEA revealed peak stresses in the fracture bridging zone. Results of a parametric analysis indicate that larger fracture gaps significantly impact implant mechanical behavior, potentially compromising stability. This study underscores the critical need for realistic physiological conditions in implant evaluations, providing an innovative translational approach to identify internal loads and optimize implant designs. In conclusion, this research contributes to enhancing the understanding of implant performance under physiological conditions, promoting improved designs and evaluations in fracture treatments.}, language = {en} } @article{NiedlingRichterHaemel, author = {Niedling, Katharina and Richter, Stefanie and H{\"a}mel, Kerstin}, title = {Triadic relationships in home care nursing: an integrative review of the views and experiences of older couples and nurses}, series = {BMC nursing}, volume = {24}, journal = {BMC nursing}, publisher = {BMC}, doi = {10.1186/s12912-025-03378-1}, pages = {13}, abstract = {BACKGROUND The need for long-term home care for older people with chronic health conditions is rising, and family members are bearing the brunt of this care work. Caring for a partner is a common scenario. Caregiving partners are often of advanced age themselves and have limiting health conditions of their own. Nurses need to consider the specific characteristics of partner caregiving to provide relationship-centred care. This review aims to analyse perceptions of the triadic relationship between older persons with long-term care needs, their caregiving partners and nurses and to identify approaches that can be supportive approaches that can help couples to cope with at-home care situations. METHODS This integrative review following the method outlined by Whittemore and Knafl focuses on qualitative and mixed methods studies. A systematic search in the PubMed and CINAHL databases served to identify studies dealing with experiences and perceptions of triadic care arrangements in home-based care from the perspectives of nurses, care recipients and caregiving partners. Eight studies met the inclusion criteria and investigated perceptions of the triadic relationship between nurses providing home care and older couples. They were analysed using thematic analysis. RESULTS The results show that triadic relationships in home-based care are shaped by social dynamics, role conflicts and barriers to communication. Although many couples are initially reluctant to integrate nursing professionals into home caregiving, mutual trust can develop when personnel continuity is given and sustained relationship work is performed. Clear communication, clarity on the distribution of tasks and proactive knowledge sharing by nurses facilitate cooperation. Caregiving partners desire support with self-care to preserve their ability to continue in their caregiving roles in the long term. CONCLUSIONS Understanding the dynamics of triadic relationships in nursing care and the care situation in couple relationships enables nurses to provide more targeted support to older couples. Proactive communication, role clarity and continuity of care can reduce the burden shouldered by caregiving partners and improve care quality. Further research focusing on strategies for strengthening relationship-centred interventions in home-based care is desirable. CLINICAL TRIAL NUMBER Not applicable.}, language = {en} } @inproceedings{NiemetzFuhrmannFarmbauer, author = {Niemetz, Michael and Fuhrmann, Thomas and Farmbauer, Michael}, title = {Comprehensive Amateur Radio Education including Public Outreach}, series = {IEEE Integrated STEM Education Conference (ISEC), 16-16 March 2019, Princeton, NJ, USA}, booktitle = {IEEE Integrated STEM Education Conference (ISEC), 16-16 March 2019, Princeton, NJ, USA}, publisher = {IEEE}, doi = {10.1109/ISECon.2019.8882078}, pages = {98 -- 103}, abstract = {An amateur radio lecture was developed and is conducted within the general education program of the Ostbayerische Technische Hochschule Regensburg. This course enables the students to participate in a variety of activities within the university. Different learning formats for communication engineering are carried out in combination with an amateur radio station of the university. Additionally, some of the projects serve as anchor points for increased visibility of the university in local society, e.g. by carrying out public events in connection with the local amateur radio community. It is seen that this course together with the amateur radio station have several positive effects for technical education and university visibility.}, language = {en} } @article{NiggPhuMnich, author = {Nigg, Claudio R. and Phu, Tatiana and Mnich, Carina}, title = {Strategies to prevent (STOP) substance use: a website for adolescents in Hawaii}, series = {Journal of Substance Use}, volume = {25}, journal = {Journal of Substance Use}, number = {1}, publisher = {Taylor\&Francis}, doi = {10.1080/14659891.2019.1664659}, pages = {88 -- 94}, abstract = {Background: Adolescent substance use is a global and local (Hawaii) problem. Therefore, the study goal was to develop and investigate the effect of an adolescent substance use prevention intervention website in Hawaii. Methods: A website was developed including drug overviews, health effects, how to stay away, external prevention and treatment resources, and an evaluation. Three grade 11 classes completed a baseline (T1) survey based on website content and a follow-up (T2) assessment after a 15-minute website interaction. - Results: At T1, 63/72 and at T2, 62 students participated (16-17 years old; 92\% female; 87.2\% Filipino). The number correct increased from 48.0\% (SD = 14.5) at T1 to 82.0\% (SD = 15.3) at T2 (t(59) = 13.5, p < .001). Eleven of twelve topics improved (p < .5) which addressed mental disorder drug use, workplace meth-use in Hawaii, Americans in need of drug/alcohol treatment, stimulant drugs, side effects of drugs, drug related domestic/child abuse, short-term drug effects, Hawaii and national methuse, chemicals in drugs, how to stay away, and ways of treatment. Conclusions: Adolescents improved their substance use prevention understanding. This is promising considering the brief, inexpensive, potentially scalable intervention which can be implemented within high school curricula.}, language = {en} } @article{NoisserEigenbergerWeihereretal., author = {Noisser, Vivien and Eigenberger, Andreas and Weiherer, Maximilian and Seitz, Stephan and Prantl, Lukas and Br{\´e}bant, Vanessa}, title = {Surgery of congenital breast asymmetry - which objective parameter influences the subjective satisfaction with long-term results}, series = {Archives of Gynecology and Obstetrics}, journal = {Archives of Gynecology and Obstetrics}, publisher = {Springer Nature}, doi = {10.1007/s00404-021-06218-0}, pages = {8}, abstract = {Purpose Congenital breast asymmetry is a serious gynecological malformation for affected patients. The condition hits young women in puberty and is associated with socio-esthetic handicap, depression, and psychosexual problems. Surgical treatment is usually early in the patient's lifetime, so a long-term sustainable solution is important. Although postoperative outcome has been evaluated in several studies before, this study is the first to analyze which objective parameters have the greatest influence on subjective satisfaction with long-term results. Methods Thirty-four patients diagnosed with congenital breast asymmetry that underwent either lipofilling or implant therapy between the years of 2008 to 2019 were examined. On average, our collective comprised patients seven years after surgery. Data were mainly gathered through manual measurements, patient-reported outcome measures (Breast Q™), and breast volumetry based on 3D scans (Vectra® H2, Canfield Scientific). Results Among all analyzed parameters, only areolar diameter correlated significantly negatively with the subjective outcome satisfaction of the patient. Regarding the subjective assessment of postoperative satisfaction with similarity of the breasts, again the mean areolar diameter, but also the difference in areolar diameter and breast volume between the right and left breasts correlated significantly negatively. Conclusion Areolar diameter was revealed as being a significant factor influencing subjective long-term satisfaction in breast asymmetry patients. Moreover, 3D volumetry proves to be an effective tool to substantiate subjective patient assessments. Our findings may lead to further improvements to surgical planning and will be expanded in further studies.}, language = {en} } @misc{NothackerSchaeferGogoletal., author = {Nothacker, Monika and Schaefer, Corinna and Gogol, Manfred and Klemperer, David and Lynen-Jansen, Petra and Kopp, Ina}, title = {Gemeinsam Klug Entscheiden - Initiative der AWMF und ihrer Fachgesellschaften - ein Werkstattberich}, series = {Zeitschrift f{\"u}r Gerontologie und Geriatrie}, volume = {50}, journal = {Zeitschrift f{\"u}r Gerontologie und Geriatrie}, number = {Suppl 1}, publisher = {Springer Nature}, pages = {S9}, abstract = {Gemeinsam Klug Entscheiden ist eine Initiative der AWMF und ihrer Fachgesellschaften, mit dem Ziel, Empfehlungen zu Versorgungsaspek- ten in die Versorgung zu bringen, f{\"u}r die ein großes Verbesserungspoten- tial besteht. Der Impuls daf{\"u}r wurde durch die TOP-5-Listen der Choosing Wisely Kampagne gegeben. Ziel des Posters ist es das Vorgehen und die Methodik f{\"u}r eine evidenzbasierte Entwicklung bekannt zu machen und zu diskutieren im Hinblick auf Machbarkeit und Verbesserungspotential.}, language = {en} } @inproceedings{NunesHammerHammeretal., author = {Nunes, Danilo Weber and Hammer, Michael and Hammer, Simone and Uller, Wibke and Palm, Christoph}, title = {Classification of Vascular Malformations Based on T2 STIR Magnetic Resonance Imaging}, series = {Bildverarbeitung f{\"u}r die Medizin 2022: Proceedings, German Workshop on Medical Image Computing, Heidelberg, June 26-28, 2022}, booktitle = {Bildverarbeitung f{\"u}r die Medizin 2022: Proceedings, German Workshop on Medical Image Computing, Heidelberg, June 26-28, 2022}, publisher = {Springer Vieweg}, address = {Wiesbaden}, doi = {10.1007/978-3-658-36932-3_57}, pages = {267 -- 272}, abstract = {Vascular malformations (VMs) are a rare condition. They can be categorized into high-flow and low-flow VMs, which is a challenging task for radiologists. In this work, a very heterogeneous set of MRI images with only rough annotations are used for classification with a convolutional neural network. The main focus is to describe the challenging data set and strategies to deal with such data in terms of preprocessing, annotation usage and choice of the network architecture. We achieved a classification result of 89.47 \% F1-score with a 3D ResNet 18.}, language = {en} } @article{ObermaierLehleSchmidetal., author = {Obermaier, Lisa and Lehle, Karla and Schmid, Stefanie and Schmid, Christof and Schratzenstaller, Thomas}, title = {Introduction of a new ex vivo porcine coronary artery model: Evaluation of the direct vascular injury after stent implantation with and without dogbone effect}, series = {European Surgical Research}, volume = {63}, journal = {European Surgical Research}, number = {4}, publisher = {Karger}, address = {Basel}, issn = {1421-9921}, doi = {10.1159/000527883}, pages = {285 -- 293}, abstract = {Introduction: Neointimal hyperplasia after percutaneous coronary intervention remains a major determinant of in-stent restenosis (ISR). The extent of mechanical vessel injury correlates with ISR. A new ex vivo porcine stent model was introduced and evaluated comparing different stent designs. Methods: Coronary arteries were prepared from pig hearts from the slaughterhouse and used for ex vivo implantations of coronary stents. One basic stent design in two configurations (dogbone, DB; non-dogbone, NDB) was used. Vascular injury was determined according to a modified injury score (IS). Results: Standardized experimental conditions ensured comparable vessel dimensions and overstretch data. DB stents caused more severe IS compared to NDB stents. The mean IS and the IS at the distal end of all stents were significantly reduced for NDB stents (ISMean, DB, 1.16 ±0.12; NDB, 1.02 ±0.12; p=0.018; ISDist, DB, 1.39 ±0.28; NDB, 1.13 ±0.24; p=0.03). Discussion/Conclusion: The introduced ex-vivo model allowed the evaluation of different stent designs exclude unfavorable stent designs.}, language = {en} } @article{OsterholtSalberMatuschetal., author = {Osterholt, Tobias and Salber, Dagmar and Matusch, Andreas and Becker, Johanna Sabine and Palm, Christoph}, title = {IMAGENA: Image Generation and Analysis}, series = {International Journal of Mass Spectrometry}, volume = {307}, journal = {International Journal of Mass Spectrometry}, number = {1-3}, doi = {10.1016/j.ijms.2011.03.010}, pages = {232 -- 239}, abstract = {Metals are involved in many processes of life. They are needed for enzymatic reactions, are involved in healthy processes but also yield diseases if the metal homeostasis is disordered. Therefore, the interest to assess the spatial distribution of metals is rising in biomedical science. Imaging metal (and non-metal) isotopes by laser ablation mass spectrometry with inductively coupled plasma (LA-ICP-MS) requires a special software solution to process raw data obtained by scanning a sample line-by-line. As no software ready to use was available we developed an interactive software tool for Image Generation and Analysis (IMAGENA). Unless optimised for LA-ICP-MS, IMAGENA can handle other raw data as well. The general purpose was to reconstruct images from a continuous list of raw data points, to visualise these images, and to convert them into a commonly readable image file format that can be further analysed by standard image analysis software. The generation of the image starts with loading a text file that holds a data column of every measured isotope. Specifying general spatial domain settings like the data offset and the image dimensions is done by the user getting a direct feedback by means of a preview image. IMAGENA provides tools for calibration and to correct for a signal drift in the y-direction. Images are visualised in greyscale as well a pseudo-colours with possibilities for contrast enhancement. Image analysis is performed in terms of smoothed line plots in row and column direction.}, subject = {ICP-Massenspektrometrie}, language = {en} } @article{OttRosengarthDoenitzetal., author = {Ott, Christian and Rosengarth, Katharina and Doenitz, Christian and Hoehne, Julius and Wendl, Christina and Dodoo-Schittko, Frank and Lang, Elmar Wolfgang and Schmidt, Nils Ole and Goldhacker, Markus}, title = {Preoperative Assessment of Language Dominance through Combined Resting-State and Task-Based Functional Magnetic Resonance Imaging}, series = {Journal of personalized medicine}, volume = {11}, journal = {Journal of personalized medicine}, number = {12}, publisher = {MDPI}, doi = {10.3390/jpm11121342}, abstract = {Brain lesions in language-related cortical areas remain a challenge in the clinical routine. In recent years, the resting-state fMRI (RS-fMRI) was shown to be a feasible method for preoperative language assessment. The aim of this study was to examine whether language-related resting-state components, which have been obtained using a data-driven independent-component-based identification algorithm, can be supportive in determining language dominance in the left or right hemisphere. Twenty patients suffering from brain lesions close to supposed language-relevant cortical areas were included. RS-fMRI and task-based (TB-fMRI) were performed for the purpose of preoperative language assessment. TB-fMRI included a verb generation task with an appropriate control condition (a syllable switching task) to decompose language-critical and language-supportive processes. Subsequently, the best fitting ICA component for the resting-state language network (RSLN) referential to general linear models (GLMs) of the TB-fMRI (including models with and without linguistic control conditions) was identified using an algorithm based on the Dice index. Thereby, the RSLNs associated with GLMs using a linguistic control condition led to significantly higher laterality indices than GLM baseline contrasts. LIs derived from GLM contrasts with and without control conditions alone did not differ significantly. In general, the results suggest that determining language dominance in the human brain is feasible both with TB-fMRI and RS-fMRI, and in particular, the combination of both approaches yields a higher specificity in preoperative language assessment. Moreover, we can conclude that the choice of the language mapping paradigm is crucial for the mentioned benefits.}, language = {en} } @article{OttPalmVogtetal., author = {Ott, Tankred and Palm, Christoph and Vogt, Robert and Oberprieler, Christoph}, title = {GinJinn: An object-detection pipeline for automated feature extraction from herbarium specimens}, series = {Applications in Plant Sciences}, volume = {8}, journal = {Applications in Plant Sciences}, number = {6}, publisher = {Wiley, Botanical Society of America}, issn = {2168-0450}, doi = {10.1002/aps3.11351}, pages = {e11351}, abstract = {PREMISE: The generation of morphological data in evolutionary, taxonomic, and ecological studies of plants using herbarium material has traditionally been a labor-intensive task. Recent progress in machine learning using deep artificial neural networks (deep learning) for image classification and object detection has facilitated the establishment of a pipeline for the automatic recognition and extraction of relevant structures in images of herbarium specimens. METHODS AND RESULTS: We implemented an extendable pipeline based on state-of-the-art deep-learning object-detection methods to collect leaf images from herbarium specimens of two species of the genus Leucanthemum. Using 183 specimens as the training data set, our pipeline extracted one or more intact leaves in 95\% of the 61 test images. CONCLUSIONS: We establish GinJinn as a deep-learning object-detection tool for the automatic recognition and extraction of individual leaves or other structures from herbarium specimens. Our pipeline offers greater flexibility and a lower entrance barrier than previous image-processing approaches based on hand-crafted features.}, subject = {Deep Learning}, language = {en} } @article{PalmAxerGraesseletal., author = {Palm, Christoph and Axer, Markus and Gr{\"a}ßel, David and Dammers, J{\"u}rgen and Lindemeyer, Johannes and Zilles, Karl and Pietrzyk, Uwe and Amunts, Katrin}, title = {Towards ultra-high resolution fibre tract mapping of the human brain}, series = {Frontiers in Human Neuroscience}, volume = {4}, journal = {Frontiers in Human Neuroscience}, doi = {10.3389/neuro.09.009.2010}, pages = {9}, abstract = {Polarised light imaging (PLI) utilises the birefringence of the myelin sheaths in order to visualise the orientation of nerve fibres in microtome sections of adult human post-mortem brains at ultra-high spatial resolution. The preparation of post-mortem brains for PLI involves fixation, freezing and cutting into 100-μm-thick sections. Hence, geometrical distortions of histological sections are inevitable and have to be removed for 3D reconstruction and subsequent fibre tracking. We here present a processing pipeline for 3D reconstruction of these sections using PLI derived multimodal images of post-mortem brains. Blockface images of the brains were obtained during cutting; they serve as reference data for alignment and elimination of distortion artefacts. In addition to the spatial image transformation, fibre orientation vectors were reoriented using the transformation fields, which consider both affine and subsequent non-linear registration. The application of this registration and reorientation approach results in a smooth fibre vector field, which reflects brain morphology. PLI combined with 3D reconstruction and fibre tracking is a powerful tool for human brain mapping. It can also serve as an independent method for evaluating in vivo fibre tractography.}, subject = {Bildgebendes Verfahren}, language = {en} } @article{PaschkeFoltanWagneretal., author = {Paschke, Lukas and Foltan, Maik and Wagner, Maria S. and Lubnow, Matthias and Gruber, Michael and Krenkel, Lars and Lehle, Karla}, title = {Clinical Relevance of Platelet-Leukocyte Aggregates and Platelet P-Selectin Expression During Venovenous Extracorporeal Membrane Oxygenation}, series = {ASAIO Journal}, journal = {ASAIO Journal}, number = {April 03}, publisher = {Wolters Kluwer}, issn = {1058-2916}, doi = {10.1097/MAT.0000000000002421}, abstract = {Thrombosis continues to be a significant complication during venovenous extracorporeal membrane oxygenation (V-V ECMO). Platelet activation markers might serve as indicators of inflammation and thrombogenesis. The aim was to identify these markers in ECMO patients. Blood from 10 ECMO patients (before, during, after ECMO) and 11 healthy volunteers were collected to determine platelet-neutrophil-aggregates (PNAs), platelet-monocyte-aggregates (PMAs), fibrinogen-binding, and P-selectin-expression on platelets by flow cytometry. Critical illness was associated with significantly elevated levels of PNAs and PMAs, increased P-selectin expression, reduced fibrinogen-binding, and restricted activation of platelets. Although PNAs and PMAs decreased significantly within 2 hours after the initiation of ECMO and remained at those levels, ECMO did not affect basal P-selectin expression and fibrinogen-binding. These results correlated with coagulation activation. Platelet markers before ECMO were not indicators for an imminent system exchange and end of therapy. In conclusion, platelet dysfunction during ECMO was mainly attributed to the critical illness. Extracorporeal membrane oxygenation support strengthened the restricted response of platelets to exogenous agonists (P-selectin). Furthermore, a decrease in PNAs/PMAs after ECMO started identified a reduced inflammatory response. There was no correlation of analyzed platelet parameters with the incidence of thrombotic complications.}, language = {en} } @article{PassosSouzaJrMendeletal., author = {Passos, Leandro A. and Souza Jr., Luis Antonio de and Mendel, Robert and Ebigbo, Alanna and Probst, Andreas and Messmann, Helmut and Palm, Christoph and Papa, Jo{\~a}o Paulo}, title = {Barrett's esophagus analysis using infinity Restricted Boltzmann Machines}, series = {Journal of Visual Communication and Image Representation}, volume = {59}, journal = {Journal of Visual Communication and Image Representation}, publisher = {Elsevier}, doi = {10.1016/j.jvcir.2019.01.043}, pages = {475 -- 485}, abstract = {The number of patients with Barret's esophagus (BE) has increased in the last decades. Considering the dangerousness of the disease and its evolution to adenocarcinoma, an early diagnosis of BE may provide a high probability of cancer remission. However, limitations regarding traditional methods of detection and management of BE demand alternative solutions. As such, computer-aided tools have been recently used to assist in this problem, but the challenge still persists. To manage the problem, we introduce the infinity Restricted Boltzmann Machines (iRBMs) to the task of automatic identification of Barrett's esophagus from endoscopic images of the lower esophagus. Moreover, since iRBM requires a proper selection of its meta-parameters, we also present a discriminative iRBM fine-tuning using six meta-heuristic optimization techniques. We showed that iRBMs are suitable for the context since it provides competitive results, as well as the meta-heuristic techniques showed to be appropriate for such task.}, subject = {Speiser{\"o}hrenkrankheit}, language = {en} }