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Eingeladener Vortrag
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Microbiologically influenced corrosion (MIC) is a phenomenon of increasing concern which affects various materials and sectors of society. MIC describes the effects, often negative, that a material can experience due to the presence of microorganisms. Unfortunately, although several research groups and industrial actors worldwide have already addressed MIC, discussions are fragmented, while information sharing and willingness to reach out to other disciplines is limited. A truly interdisciplinary approach, that would be logical for this material/biology/chemistry-related challenge, is rarely taken. In this review we highlight critical non-biological aspects of MIC that can sometimes be overlooked by microbiologists working on MIC but are highly relevant for an overall understanding of this phenomenon. Here, we identify gaps, methods and approaches to help solve MIC related challenges, with an emphasis on the MIC of metals. We also discuss the application of existing tools and approaches for managing MIC and propose ideas to promote an improved understanding of MIC. Furthermore, we highlight areas where the insights and expertise of microbiologists are needed to help progress this field.
Bei dem Vortrag werden die potentiellen mikrobiologischen Einflüsse im Falle der Lagerung von Wasserstofflagerung in unterirdischen geologischen Formationen vorgestellt, die Zusammenarbeit mit internen und auch externen Partnern. Der Fokus liegt dabei auf UGF; anaerobe Umgebungen, Sulfate reduzierenden Bakterien, methanogenen Archaea, weiterleitenden Systeme und die Kombination der Untersuchung abiotisch/biotische
Biocides are used for a wide range of purposes, including disinfectants or preservatives. They play a major role in the prevention of microbial infections in healthcare and animal husbandry. The use of biocides often leads to the discharge of active biocidal substances into wastewater streams, causing the exposure of wastewater microbial communities to subinhibitory concentrations. In turn, it is known that wastewater treatment plants (WWTP) are hotspots for antibiotic resistant bacteria. Since similar mechanisms confer resistance to biocides and antibiotics, exposure to biocides can result in co-selection of antibiotic resistant bacteria in WWTP Here, we want to investigate co-selection processes of antibiotic resistance in natural WWTP microbial communities upon biocide exposure. Microbial communities were sampled at the WWTP Ruhleben in Berlin and characterized regarding their susceptibility against different clinically relevant antibiotics. To investigate the link between biocide exposure and antibiotic resistance, changes in the susceptibility level after exposure to environmentally relevant concentrations of the commonly used biocide didecyldimethylammonium chloride (DDAC) will be determined by enumerating resistant and non-resistant E. coli on selective plates with and without antibiotics and DDAC. In case of antibiotics, clinical breakpoint concentrations according to EUCAST will be used to discriminate between susceptible and resistant strains. In case of DDAC (and biocides in general), clinical breakpoints do not exist. Therefore, we determined a cut-off concentration at which the majority of naturally-occurring E. coli strains cannot grow anymore based on (I) the MIC (minimal inhibitory concentration) distribution, and (II) by plating wastewater communities onto selective indicator agar plates loaded with increasing DDAC concentration. Additionally, antibiotic cross-resistance will be determined by spotting single colonies, isolated from DDAC-selective plates onto antibiotic plates. The results of our experiments will help to determine selective concentrations and to estimate the risk of antibiotic co-selection and cross-resistance in microbial WWTP communities upon biocide exposure.
Consequences of tolerance to disinfectants on the evolution of antibiotic resistance in E. coli
(2023)
Biocides are used as disinfectants and preservatives; one important active substance in biocides is benzalkonium chloride (BAC). BAC-tolerant bacterial strains can survive short treatments with high concentrations of BAC. BAC tolerance and resistance have been linked to antibiotic resistance. Here, the selection dynamics between a BAC-tolerant Escherichia coli strain and a sensitive wild type were investigated under four conditions: in the absence of antibiotics and in the presence of three different sub-inhibitory concentrations of the antibiotic ciprofloxacin in liquid cultures. The wild type was selected over the BAC-tolerant strain in the absence of antibiotics, while the BAC-tolerant strain was selected over the wild type at all ciprofloxacin concentrations investigated, with a minimum selection concentration (MSC) of 1/10th of the minimum inhibitory concentration (MIC) of the wild type. Furthermore, the evolvability of resistance of the two strains to inhibitory concentrations of ciprofloxacin was assessed by performing a serial dilution evolution experiment with gradually increasing ciprofloxacin concentrations. The wild type had a higher probability to develop resistance
to ciprofloxacin than the tolerant strain. By the end of the evolution experiment both strains evolved to grow at the highest ciprofloxacin concentration investigated, which was 2048 ×MIC of the wild type. The importance of these results is highlighted by the fact that concentrations of ciprofloxacin well above the calculated MSC can be found in environmental samples such as hospital wastewaters and livestock slurry. In turn, BAC is used as a disinfectant in the same settings. Thus, the selection of BAC-tolerant strains at sub-inhibitory concentrations of ciprofloxacin can contribute to the stabilization and spread of BAC-tolerance in natural populations. The prevalence of such strains can impair the effects of BAC disinfections.
Human-made systems, also called “build environment” or “technosphere”, sustain human comfort as well as our industrial activities. These systems have become particularly widespread since the Industrial Revolution, i.e., since the 17th century. At the same time, these technical systems – buildings, monuments, energy production, transformation and transmission, water purification and supply systems - serve as new habitats for living organisms.
Life is ubiquitously present on our planet since a very long time: the Earth is 4.54 billion years old and microbial communities have played a key role on our planet for 3.7 billion years. Once human-made system appeared, microorganisms became an integral part of all types of technosphere infrastructure as well.
Here we will illustrate biosphere-technosphere interactions using a specific example of the black fungi and their impact on the efficiency of solar (photovoltaic) panels. This expanding renewable infrastructure for electricity generation is growing on all continents - and create a specific, arid habitat for stress-tolerant black fungi.
Black fungi were once discovered in hot and cold natural deserts – and now belong to the persistent colonisers of human-made deserts of solar parks. This new niche is evolving an impressive biodiversity. So far more than 60 isolates of black fungi belonging to Arthoniomycetes, Eurotiomycetes and Dothideomycetes were obtained from solar panels in Europe and Americas. Here we will present the analysis of this emerging anthropogenic biodiversity.
Opportunities for future research in the field include quantification of the microbial load on technosphere surfaces – along with characterisation of the corresponding microbial diversity. The strategy of precise measurement and characterisation will enable us to reliably determine the beneficial and harmful functions that living microorganisms play in the functioning of energy-generating systems – and technosphere in general.
Excessive discharge of quaternary ammoniumdisinfectants such as benzalkonium chloride (BAC) into aquatic systems can trigger several physiological responses in environmental microorganisms. In this study, we isolated a less-susceptible strain of Aeromonas hydrophila to BAC, designated as INISA09, froma wastewater treatment plant in Costa Rica. We characterized its phenotypic response upon exposure to three dierent concentrations of BAC and characterizedmechanisms related to its resistance using genomic and proteomic approaches. The genome of the strain, mapped against 52 dierent sequenced A. hydrophila strains, consists of approximately 4.6Mb with 4,273 genes. We found a massive genome rearrangement and thousands of missense mutations compared to the reference strain A. hydrophila ATCC 7966.
We identified 15,762 missense mutations mainly associated with transport, antimicrobial resistance, and outer membrane proteins.
In addition, a quantitative proteomic analysis revealed a significant upregulation of several efflux pumps and the downregulation of porins when the strain was exposed to three BAC concentrations.Other genes related tomembrane fatty acid metabolism and redox metabolic reactions also showed an altered expression.
Our findings indicate that the response of A. hydrophila INISA09 to BAC primarily occurs at the envelop level, which is the primary target of BAC. Our study elucidates the mechanisms of antimicrobial susceptibility in aquatic environments against a widely used disinfectant and will help better understand howbacteria can adapt to biocide pollution. To our knowledge, this is the first study addressing the resistance to BAC in an environmental A. hydrophila isolate. We propose that this bacterial species could also serve as a new model to study antimicrobial pollution in aquatic environments.
Glutaraldehyde (GTA) is commonly used to disinfect medical equipment, in animal husbandry and in hydraulic fracturing. Its wide use bears the risk that microorganisms in different environments are exposed to potentially non-lethal doses of glutaraldehyde. To date, little is known about the effects of glutaraldehyde on the susceptibility of bacteria to antibiotics and its role in the selection of tolerant phenotypes.
Objectives
• To determine the effect of glutaraldehyde exposure on the survival of E. coli, S. aureus and P. aeruginosa to antibiotics
• To find the mechanistic basis for antibiotic tolerance upon glutaraldehyde exposure
Materials & Methods
Four bacterial isolates were exposed to sub-inhibitory glutaraldehyde. Antibiotic tolerance was determined by time-kill assays. Regrowth dynamics (lag times) were determined with ScanLag. E. coli was further investigated, using RNAseq to identify genes and processes involved in antibiotic tolerance. Mutants of candidate genes were screened for their antibiotic tolerance and heterogeneous target gene expression under stressed and unstressed conditions.
Results
Short-term exposure to sub-inhibitory levels of glutaraldehyde induced tolerance to high doses of bactericidal antibiotics. Tolerance to antibiotics was associated with highly heterogeneous regrowth dynamics and global transcriptome remodeling. Differentially expressed genes represented diverse biological functions and cellular components, including antibiotic efflux, metabolic processes, and the cell envelope. The heterogeneous regrowth dynamics and the diversity of the differentially expressed genes are likely related to the unspecific mode-of-action of glutaraldehyde. Among the many differentially expressed genes, several genes were identified that were not previously associated with antibiotic tolerance or persistence, which, when overexpressed alone, increased antibiotic tolerance.
Conclusion
Our results highlight how the big advantage of a disinfectant, its unspecific mode-of-action, can induce transient tolerance to antibiotics in bacteria. These findings have implications for 1.) settings where disinfectants and antibiotics are used in proximity, such as hospitals and animal husbandry, and 2.) for the selection dynamics of tolerant bacteria in fluctuating environments because of the trade-off that arises from overcoming the lag phase as fast as possible and maintaining antibiotic tolerance.
Glutaraldehyde is widely used as a disinfectant and preservative, but little is known about its effects on bacterial susceptibility to antibiotics and the selection of tolerant phenotypes. We found that short-term exposure to sub-inhibitory levels of glutaraldehyde makes E. coli resistant to high doses of bactericidal antibiotics from different classes. This tolerance is associated with delayed, heterogeneous regrowth dynamics and global transcriptome remodeling. We identified over 1200 differentially expressed genes, including those related to antibiotic efflux, metabolic processes, and the cell envelope. The cells entered a disrupted state likely due to the unspecific mode-of-action of glutaraldehyde. Despite this unregulated response, we identified several differentially expressed genes not previously associated with antibiotic tolerance or persistence that induce antibiotic tolerance when overexpressed alone. These findings highlight how the unspecific mode-of-action of disinfectants can make bacteria temporarily resistant to antibiotics. They have implications for settings where disinfectants and antibiotics are used in close proximity, such as hospitals and animal husbandry, and for the selection dynamics of tolerant pheno- and genotypes in fluctuating environments where microorganisms are exposed to these substances, such as sewage systems. A trade-off arises from overcoming the disrupted state as quickly as possible and maintaining antibiotic tolerance.
Glutaraldehyde is widely used as a disinfectant and preservative, but little is known about its effects on bacterial susceptibility to antibiotics and the selection of tolerant phenotypes. We found that short-term exposure to sub-inhibitory levels of glutaraldehyde makes E. coli resistant to high doses of bactericidal antibiotics from different classes. This tolerance is associated with delayed, heterogeneous regrowth dynamics and global transcriptome remodeling. We identified over 1200 differentially expressed genes, including those related to antibiotic efflux, metabolic processes, and the cell envelope. The cells entered a disrupted state likely due to the unspecific mode-of-action of glutaraldehyde. Despite this unregulated response, we identified several differentially expressed genes not previously associated with antibiotic tolerance or persistence that induce antibiotic tolerance when overexpressed alone. These findings highlight how the unspecific mode-of-action of disinfectants can make bacteria temporarily resistant to antibiotics. They have implications for settings where disinfectants and antibiotics are used in close proximity, such as hospitals and animal husbandry, and for the selection dynamics of tolerant pheno- and genotypes in fluctuating environments where microorganisms are exposed to these substances, such as sewage systems. A trade-off arises from overcoming the disrupted state as quickly as possible and maintaining antibiotic tolerance.
In this presentation the results of the Project HySpark are shown. Mechanical impacts are among the important possible ignition sources to be considered in explosion protection. Hydrogen is particularly prone to be ignited by mechanical impacts compared to natural gas. The effectivity of mechanical impacts as ignition source is dependent from different parameters. In this work the effectivity of impacts as an ignition source for hydrogen containing atmospheres was studied experimentally depending on the inhomogeneous material pairing of the impact. Moreover it was studied, how the effectivity of mechanical impacts as ignition source changes when hydrogen is added to natural gas.
This study investigates the non-destructive detection of delaminations in concrete plates using non-contact laser ablation, instead of the conventional hammer excitation, as part of the impact echo method. We performed tests on five concrete specimens of different sizes, two of which contained artificial delaminations. A range of steel ball hammers was used as reference impulse sources, the responses of which were compared with wave excitation generated by a 7 ns pulsed 1064 nm Nd:YAG laser with 150 mJ pulse energy. Signals were recorded by surface-mounted accelerometers and two contactless methods: microphones and a laser Doppler vibrometer. The laser generates frequencies across a broad range of frequencies (0 to 150 kHz) but with much less energy than the hammers' narrower frequency spectra; the laser pulse energy transferred into the specimen is 0.07 mJ, corresponding to about 0.5 ‰ of the impulse source energy. Because of this, the thick intact plates' characteristic thickness stretch resonance frequency can be reliably detected by the hammer excitations but not when using laser excitation. However, the laser can excite low-frequency flexural vibration modes over a shallow delamination at 3 cm depth. The low-frequency flexural vibration results are verified by numerical natural frequency analysis.
In dem hier vorgestellten Projekt wurde die Wirksamkeit mechanischer Schläge als Zündquelle für wasserstoffhaltige Atmosphären in Abhängigkeit von der inhomogenen Materialpaarung systematisch untersucht. Dabei wurden praxisrelevante Materialien wie Edelstahl, niedrig legierter Stahl, Beton und Nichteisenmetalle betrachtet. Es wurde festgestellt, dass eine Zündung vermieden werden kann, wenn Nichteisenmetalle in Kombination mit verschiedenen metallischen Werkstoffen verwendet werden. In Kombination mit Beton muss die kinetische Schlagenergie auch mit Nichteisenmetallen weiter begrenzt werden, um eine wirksame Entzündung zu vermeiden. Außerdem wurde untersucht, wie sich die Beimischung von Wasserstoff zu Erdgas auf die Wirksamkeit mechanischer Stöße als Zündquelle auswirkt. Bei Beimischungen von bis zu 25 % Wasserstoff und sogar mehr konnte kein Einfluss festgestellt werden. Die Ergebnisse sind vor allem relevant im Zusammenhang mit der Umwidmung des Erdgasnetzes oder der Beimischung von Wasserstoff im Erdgasnetzes.
Liebe Leser*innen,
vom Umbau des Energiesystems über die Nachhaltigkeit der Wirtschaft bis hin zu den Veränderungen unserer Städte und der Mobilität: Das Wort Transformation ist wohl neben der "Zeitenwende" das derzeit mit am häufigsten gebrauchte. Wir sind zweifellos in einer neuen Wirklichkeit angekommen, die sich nicht umdeuten lässt, sondern die aktiv von uns gestaltet werden muss.
Aber sind wir überhaupt in der Lage, unsere ökonomische Basis zu schützen und gleichzeitig unsere Aufmerksamkeit auf den Erhalt von Ressourcen statt deren Ausnutzung zu richten? Ich glaube fest daran, dass wir das können. Produzieren hieße dann z. B., Lösungen im Sinne einer zirkulären Wirtschaft zu finden. Zur grünen Transformation leistet die BAM, deren Auftrag es ist, die deutsche Wirtschaft zu fördern, bereits heute vielfältige Beiträge: durch Grundlagenforschung, die den schnellen Weg in die Anwendung findet. Aber auch durch unsere Vielfalt und Spezialisierung, die es uns erlauben, eine übergreifende Perspektive zu entwickeln. Denn: Lösungen für den Wandel zu finden, bedeutet auch eine Veränderung des Denkens.
So sind wir z. B. beteiligt an der Entwicklung smarter Tools bei der Qualitätssicherung moderner Wasserstofftechnologien, nachhaltiger Batteriematerialien für leistungsstarke E-Akkus oder sicherer Konstruktionen für noch größere und effizientere Windenergieanlagen. Langfristig erfolgreich werden wir dabei nur sein, wenn wir uns selbst transformieren.
So sind wir in der BAM dabei, unsere Expertisen in weiteren disziplin- und branchenübergreifenden Kompetenzzentren zu bündeln, neue ganzheitliche Formate der Zusammenarbeit zu erproben und unsere Vernetzung mit relevanten Akteur*innen aus Wirtschaft, Wissenschaft und Politik weiter auszubauen.
Im neuen BAM Report 2022/23 möchten wir Ihnen gern eine Auswahl unserer aktuellen Projekte vorstellen. Idealerweise ergeben sich aus der Lektüre für Sie Anknüpfungspunkte für gemeinsame Vorhaben und Initiativen, mit denen wir zusammen die Transformation sicher gestalten können. Lassen Sie uns darüber ins Gespräch kommen!
PS: Erstmals erscheint unsere Jahrespublikation übrigens rein digital, als kleiner Beitrag zu mehr Nachhaltigkeit.
Disinfectants are important to prevent the transmission of pathogens, especially in the face of the current antibiotic resistance crisis. The crisis is further exacerbated by phenotypically tolerant persister subpopulations that can survive transient antibiotic treatment and facilitate resistance evolution. Despite the transient nature of disinfectant application, persistence to disinfectants and its role for the evolution of tolerance and cross-resistance to antibiotics has not been studied. Our work shows that E. coli displays persistence against several widely used disinfectants, including benzalkonium chloride (BAC), didecyldimethylammoniumchlorid (DDAC) and isopropanol. The molecular mechanism of BAC persistence is triggered in stationary phase and affected by several antibiotic persister genes (hipA, tisB, tolC, relA, spoT). Experimental evolution and population dynamic modeling show that repeated failure of disinfection due to persisters rapidly selects for BAC tolerance underpinned by reduced cell surface charge due to mutations in genes related to lipid A acylation (lpxML). Furthermore, evolved BAC tolerance affects the susceptibility to antibiotics, leading to positive selection of disinfectant tolerant strains at environmentally relevant antibiotic concentrations and variations in evolvability of antibiotic resistance due to epistatic effects. These results highlight the need for faithful application of disinfectants to steward their efficacy and the efficacy of antibiotics. A better understanding of the bacterial response to disinfectants is crucial to understand and avert the ongoing antimicrobial resistance crisis.
Die Material Acceleration Platform der BAM (MAPz@BAM) bündelt unsere Automatisierungs-Expertise auf dem Gebiet der Materialwissenschaft und -prüfung. Wir entwickeln modulare Experimentmodule, automatische Prüf- und Auswerteverfahren und setzen künstliche Intelligenz für eine effiziente und autonome Versuchsplanung, - vorhersage und Datenanalyse ein.
Im Zuge der Energiewende finden Wasserstofftechnologien in der industriellen Praxis und im öffentlichen Raum immer mehr Anwendung. Beim Einsatz von Wasserstoff als Ersatz für andere fossile Energieträger wie Erdgas müssen u.a. Explosionsschutzmaßnahmen überprüft und angepasst werden. Eine Art von Explosionsschutzmaßnahmen ist die Vermeidung von Zündquellen. Gemäß den einschlägigen Regelwerken ist die Bildung von Funken oder heißen Aufschlagstellen beim mechanischen Schlag eine mögliche Zündquelle, die vor allem beim Wasserstoff berücksichtigt werden muss. Die Zündwirksamkeit ist dabei u.a. stark von der Werkstoffpaarung und der kinetischen Schlagenergie abhängig. Der Einsatz von funkenarmen Werkzeugen aus schwer oxidierbaren Nicht-Eisen-Metallen in explosionsgefährdeten Bereichen kann z.B. eine Maßnahme sein, um diese Zündquelle zu vermeiden und wird als solche in den Regelwerken benannt. Es gibt aber kaum Quellen, die dabei helfen die Zündwirksamkeit bei Schlägen mit heterogenen Materialpaarungen einzuschätzen. In dieser Arbeit wurde zu diesem Zweck die Zündwirksamkeit von mechanischen Schlägen mit unterschiedlichen, auch nicht-metallischen Schlagpartnern in wasserstoffhaltigen Atmosphären systematisch untersucht.
BAM Inside #7/2023
(2023)
Pseudomonas aeruginosa is an opportunistic pathogen of considerable medical importance, owing to its pronounced antibiotic tolerance and association with cystic fibrosis and other life-threatening diseases. The aim of this study was to highlight the genes responsible for P. aeruginosa biofilm tolerance to antibiotics and thereby identify potential new targets for the development of drugs against biofilm-related infections. By developing a novel screening approach and utilizing a public P. aeruginosa transposon insertion library, several biofilm-relevant genes were identified. The Pf phage gene (PA0720) and flagellin gene (fliC) conferred biofilm-specific tolerance to gentamicin. Compared with the reference biofilms, the biofilms formed by PA0720 and fliC mutants were completely eliminated with a 4-fold-lower gentamicin concentration. Furthermore, the mreC, pprB, coxC, and PA3785 genes were demonstrated to play major roles in enhancing biofilm tolerance to gentamicin. The analysis of biofilm-relevant genes performed in this study provides important novel insights into the understanding of P. aeruginosa antibiotic tolerance, which will facilitate the detection of antibiotic resistance and the development of antibiofilm strategies against P. aeruginosa.
The aim of this chapter is to give an overview of basic and advanced state-of-the-art microstructural and spectroscopic analytics to investigate inorganic material corrosion in the context of biochemically aggressive sewers. The chapter covers optical methods, electron beam, X-ray and neutron techniques (SEM, MLA, XRF, XRD, CT, Neutron radiography and tomography), and spectroscopic methods (MAS-NMR, FT-IR, and Raman). For each technique, a short section on the fundamental scientific background of the method precedes and examples of data output from the latter in respect to the corrosion of cementitious materials including reinforced concrete is presented.
Die Einführung von Wasserstoff als sicherer Energieträger braucht eine robuste Wissensbasis, darauf aufgebaute Werkzeuge zur Auslegung und Sicherheitsbewertung von Wasserstofftechnologien und ein international harmonisiertes Regelwerk. Viele der innovativen Technologien implizieren Wasserstoff bei hohen Drücken und/oder kryogenen Temperaturen, mit denen in verteilten Anwendungen erstmalig private Nutzer in Kontakt kommen. Um überkonservative, teure Sicherheitslösungen zu vermeiden, gleichzeitig aber die Einsetzbarkeit und Sicherheit von Wasserstoffanwendungen zu demonstrieren und die Akzeptanz für die Technologie aufrecht zu halten, muss auch die Sicherheitsforschung mit den Trends der technologischen Entwicklung Schritt halten, oder sie besser noch antizipieren. So beschreibt dieser Überblicksartikel nicht nur den gegenwärtigen Stand der Kenntnisse und Technik bezüglich Wasserstoffsicherheit, sondern auch ihre Weiterentwicklung.
Melanins are organic pigments produced by most fungi. These organisms either fix these pigments in their cell wall or secrete them into their extracellular environment to protect themselves against an array of physicochemical stresses (e.g., UV irradiation, desiccation, ...). Melanin can adsorb metals like Fe. How this affects fungal uptake of Fe and deterioration of Fe-containing minerals and metals is however less known. To study this, we use the model fungi Knufia petricola A95, a rock-inhabiting fungus known to deteriorate minerals and have melanised cell walls, and Amorphotheca resinae, able to contaminate fuel tanks, secrete melanin and corrode metals. In K. petricola, we have deleted genes involved in melanin production and Fe uptake using CRISPR/Cas. Through comparison of the geochemical signatures of these gene deletion mutants with those of the wild type (WT), we explore the specific mineral/metal deterioration mechanisms of melanised fungi.
Fe isotope signatures of the biomass of melanin- and Fe uptake-deficient mutants of K. petricola revealed that Fe adsorbed either directly onto melanin or after being reduced by Fe reductases. Importantly, once adsorbed to melanin, Fe could not be mobilised and taken up into the cell: both the WT and its melanin-deficient mutant, previously grown at Fe replete conditions, showed similar growth at Fe deficient conditions.
Olivine dissolution experiments revealed that Fe oxidation inhibits dissolution. K. petricola was able to enhance dissolution when this inhibition is strongest (at pH 6) and prevented dissolution when this inhibition is weakest (at pH 4). The fungus therefore dissolves olivine by interacting with the oxidised Fe at the olivine surface. However, Fe uptake did not seem to be involved: mutants deficient in various Fe uptake mechanism dissolved olivine at the same rate as the WT. This indicates that Fe adsorption onto melanin might play a key role. This is also shown by K. petricola’s ability to enhance olivine dissolution even further if secreting a melanin precursor and A. resinae’s corrosion of carbon steel whilst secreting melanin. Combined, our results imply that the Fe adsorbed to melanin cannot be taken up but enables fungi to deteriorate Fe-containing substrates at a higher rate.
The ultrasonic echo technique is frequently used in non-destructive testing (NDT) of concrete structures for thickness measurements, geometry determinations as well as localization of built-in components. To improve ultrasonic imaging of complex structures in concrete, we transferred a geophysical imaging technique, the reverse time migration (RTM), to NDT in civil engineering. In contrast to the conventionally used synthetic aperture focusing technique (SAFT) algorithms, RTM is a wavefield continuation method in time and uses the full wave equation. Thus, RTM can handle complicated wave propagations in any direction without dip limitation. In this paper, we focused on the application and evaluation of a two-dimensional (2D) elastic RTM algorithm considering compressional waves, vertically polarized shear waves, and Rayleigh waves. We tested the elastic RTM routine on synthetic ultrasonic echo data generated with a 2D concrete model consisting of several steps and circular air inclusions. As these complex structures can often be found in real-world NDT use cases, their imaging is especially important. By using elastic RTM, we were able to clearly reproduce vertical reflectors and lower edges of circular air voids inside our numerical concrete model. Such structures cannot be imaged with conventional SAFT algorithms. Furthermore, the used elastic RTM approach also yielded a better reconstruction of a horizontal reflector and upper boundaries of circular air inclusions. Our encouraging results demonstrate that elastic RTM has the potential to significantly improve the imaging of complex concrete structures and, thus, is a step forward for detailed, high-quality ultrasonic NDT in civil engineering.
Silver nanoparticles (AgNPs) nowadays appear in close to 24% of consumer products that contain engineered nanomaterials. Thus, they are expected to be released into the environment, where their fate and effect are still undetermined. Considering the evidenced efficacy of the single particle Inductively Coupled Plasma – Mass Spectrometry (sp ICP-MS) technique in the study of nanomaterials, this work reports on the use of sp ICP-MS along with an online dilution sample introduction system for the direct analysis of untreated and spiked seawater samples, as part of a larger scale experiment studying the fate of Ag (ionic and nanoparticles) in seawater mesocosm systems. Silver nanoparticles coated with branched polyethyleneimine (BPEI@AgNPs) or ionic silver (Ag+) were introduced gradually into the seawater mesocosm tanks at very low, environmentally relevant concentrations (50 ng Ag L− 1 per day, for 10 consecutive days, up to a total of 500 ng Ag L− 1 ), and samples were collected and analyzed daily, within a consistent time window. Using very low detector dwell time (75 μs) and specialized data treatment, information was obtained on the nanoparticles’ size distribution and particle number concentration, as well as the ionic silver content, of both the AgNPs and the Ag+ treated seawater mesocosm tanks. The results for the AgNP treated samples indicated the rapid degradation of the added silver particles, and the subsequent increase of ionic silver, with recoveries close to 100% for the first days of the experiment. On the other hand, particle formation was observed in the Ag+ treated seawater tanks, and even though the number concentration of silver-containing nanoparticles increased throughout the experiment, the amount of silver per particle remained relatively constant from the early days of the experiment. In addition, the online dilution sample introduction system for the ICP-MS proved capable of handling the untreated seawater matrix without significant contamination issues and downtime, while the low dwell time and data treatment procedure developed were shown to be suitable for the analysis of nanomaterials at the low nm-scale, despite the complex and heavy matrix introduced into the ICP-MS.
Das Ziel des Verbundforschungsvorhabens KKS-Gründung war die Entwicklung eines Monitoringsystems zur Erfassung von Korrosion an Gründungsstrukturen im Labormaßstab. Dafür war eine umfassende Bewertung und Beschreibung korrosionsbeeinflussender Faktoren und der Korrosionssysteme notwendig. Im Vorhaben KKS-Gründung wurde die Gründungsstruktur unterhalb der Wasserlinie betrachtet bis hin zum anaeroben Bereich im Sediment. Insbesondere der Sedimentbereich wurde bisher nur unzureichend betrachtet. Da die komplexen Mechanismen in der Sedimentzone noch nicht ausreichend wissenschaftlich untersucht wurden, mussten Möglichkeiten entwickelt werden, um diese zu bewerten.
Im Verbundforschungsvorhaben KKS-Gründung agierte die Bundesanstalt für Materialforschung und -prüfung (BAM) als Forschungsstelle. Die Hauptziele des Teilvorhabens der BAM waren die Bereitstellung einer Messumgebung für das von den Partnern entwickelte Monitoringsystem, die umfassende wissenschaftliche Beschreibung der Korrosionssysteme im Unterwasserbereich und Sediment sowie die Gewinnung von Messdaten zur Verifizierung und Überführung in die Simulation. Als Forschungsstelle war die BAM der Ansprechpartner für die Verbundpartner bei wissenschaftlichen Fragestellungen.
Die Hauptziele des Vorhabens wurden erreicht und es wurden grundlegende Erkenntnisse zum Korrosionsverhalten von Offshore-Stahl im Unterwasser und Sedimentbereich gewonnen. Darüber hinaus wurden wichtige Erkenntnisse zum Betrieb eines Laborcontainers und zur Nachstellung von Korrosionssystemen in Meerwasserbecken bei Verwendung von künstlichem Meerwasser und Sand als Sediment gewonnen. Eine Beschreibung und Bewertung der Korrosivität und ablaufender Reaktionen in den einzelnen Belastungszonen wurde mittels elektrochemischer und gravimetrischer Verfahren vorgenommen.
This chapter aims to give a brief introduction into the field of alkali activated materials (AAM) and their physicochemical material behavior when exposed to sulfuric acid and in biochemically aggressive sewer environments. Additionally, the differences in material behavior within chemical (abiotic) and microbially induced acid environments are highlighted. Finally, existing data on overall performance of AAM, compared to conventional concrete-based building materials in sewer systems will be discussed.
Materials that support natural biodiversity on their surfaces can compensate for human activities that have a negative impact on nature and thus contribute to a carbon-neutral and nature-positive world. Specifically designing bioreceptive materials which favor the growth of biofilms on their surface is an approach complementing conventional, macroscopic green façades. But what exactly characterizes a bioreceptive substrate and how do biofilm and substrate interact? How and why does a spontaneous colonization and the formation of biofilms take place? What are biofilms and how can they be established in a laboratory setting? How can this existing knowledge be transferred to the artificial stone concrete so that this material can be tuned to increase (or decrease) its bioreceptivity?
This review paper aims at summarizing the existing state of knowledge on bioreceptive concrete and pointing out inconsistencies and contradictions which can only be removed by more interdisciplinary research in the field.
Mechanically flexible single crystals of molecular materials offer potential for a multitude of new directions in advanced materials design. Before the full potential of such materials can be exploited, insight into their mechanisms of action must be better understood. Such insight can be only obtained through synergistic use of advanced experimentation and simulation. We herein report the first detailed mechanistic study of elasto-plastic flexibility in a molecular solid. An atomistic origin for this mechanical behaviour is proposed through a combination of atomic force microscopy, μ-focus synchrotron X-ray diffraction, Raman spectroscopy, ab initio simulation, and computed elastic tensors. Our findings suggest that elastic and plastic bending are intimately linked and result from extensions of the same molecular deformations. The proposed mechanism bridges the gap between contested mechanisms, suggesting its applicability as a general mechanism for elastic and plastic bending in organic molecular crystals.
Uncertainty quantification of multimodal surface wave inversion using artificial neural networks
(2023)
An inversion of surface waves dispersion curves is a non-unique and ill-conditioned problem. The inversion result has a probabilistic nature, which becomes apparent when simultaneously restoring the shear wave (S-wave) velocity and layer thickness. Therefore, the problem of uncertainty quantification is relevant. Existing methods through deterministic or global optimization approaches of uncertainty quantification via posterior probability density (PPD) of the model parameters are not computationally efficient since they demand multiple solutions of the inverse problem. We present an alternative method based on a multi-layer fully connected artificial neural network (ANN). We improve the current uni-modal approach, which is known from publications, to multi-modal inversion. The learned ANN maps the phase velocity dispersion curves to values of the S-wave velocity and layers thickness. To estimate the uncertainties, we adapt the Monte-Carlo simulation strategy and project onto the resulting velocity model both frequency-dependent data noise and inverse operator errors, which are evaluated by the prediction of the training data set. The proposed combination of surface waves data processing methods, configured with each other, provides a novel surface waves multi-modal dispersion data inversion and uncertainty quantification approach. We first test our approach on synthetic experiments for various velocity models: a positive velocity gradient, a low-velocity layer and a high-velocity layer. This is done considering uni-modal inversion at first and then compared to the multi-modal inversion. Afterwards, we apply our approach to field data and compare resulting models with the body S-wave processing by the generalized reciprocal method (GRM). The experiments show high-potential results using ANN yields the possibility to accurately estimate PPD of restored model parameters without a significant computational effort. The PPD-based comparison demonstrates advantages of a multi-modal inversion over uni-modal inversion. The trained ANN provides reasonable model parameters predictions and related uncertainties in real-time.
Future lunar exploration will be based on in-situ resource utilization (ISRU) techniques. The most abundant raw material on the Moon is lunar regolith, which, however, is very scarce on Earth, making the study of simulants a necessity. The objective of this study is to characterize and investigate the sintering behavior of EAC-1A lunar regolith simulant. The characterization of the simulant included the determination of the phase assemblage, characteristic temperatures determination and water content analysis. The results are discussed in the context of sintering experiments of EAC-1A simulant, which showed that the material can be sintered to a relative density close to 90%, but only within a very narrow range of temperatures (20–30 °C). Sintering experiments were performed for sieved and unsieved, as well as for dried and non-dried specimens of EAC-1A. In addition, an analysis of the densification and mechanical properties of the sintered specimens was done. The sintering experiments at different temperatures showed that the finest fraction of sieved simulant can reach a higher maximum sintering temperature, and consequently a higher densification and biaxial strength. The non-dried powder exhibited higher densification and biaxial strength after sintering compared to the dried specimen. This difference was explained with a higher green density of the non-dried powder during pressing, rather than due to an actual influence on the sintering mechanism. Nevertheless, drying the powder prior to sintering is important to avoid the overestimation of the strength of specimens to be fabricated on the Moon.
Fungal pigments such as melanin and carotenoids are distinctive markers of animal and plant pathogenic fungi as well as their environmental relatives. These complex pigments play important roles in pathogenicity and stress tolerance while also being useful as biomarkers. Accordingly, it is important to be able to identify in situ the pigments in black fungi, a group of clinical and environmental importance. In this study, wild-type and genetically modified strains of Knufia petricola A95 and wild fungal cells attached to ancient rock were investigated for their spectroscopic and microscopic Raman features and morphological appearance. Knockout mutants of melanin synthesis genes pks1 (polyketide synthase), sdh1 (scytalone dehydratase), and both pks1 and the carotenoid synthesis gene phd1 (phytoene desaturase) were studied We applied two different Raman microscopes using two lasers, with 633 nm and 488 nm wavelengths. We analyzed and compared Raman spectra between the measured reference substances and the mutant and wild-type strains. In the wild strain WT:A95, the peaks close to melanin peals were found at 1353 cm−1 and 1611 cm−1. There are no characteristic melanin peaks at 1580–1600 cm−1 and around 1350 cm−1 at the spectrum of the Δpks1/Δphd1 mutant and the Δsdh1 mutant. The Δpks1 mutant spectrum has the peaks at the beta-carotene v2 C-C in-plane stretch at 1155 cm−1 and v3 C-CH3 deformation at 1005 cm−1. The peaks of carotenoids and melanin were found in all mutants and the wild strain, except the Δpks1/Δphd1 mutant. Raman spectra allow for discrimination between the various pigments. Hence, interactions between natural fungal melanin, as well as other protective pigments, and complex environmental matrices can be characterized on a range of spatial and temporal scales.
In this study, the wavefield radiated from a building to its surroundings is identified and extracted from M4.6 earthquake recordings collected by sensors installed in a building and on the nearby athletic field in Matera (Italy) using a new approach for soil-structure interaction assessment. The proposed approach for earthquake data analysis combines in an innovative way two methods already used in seismology and engineering seismology: deconvolution and polarization analysis. The approach enables the identification, reconstruction, and characterization of the wavefield radiated from a vibrating building into its surroundings, and the estimation of the amount of energy associated with it. The approach consists of four steps: estimation of the resonant frequencies of the building, deconvolution of the earthquake recordings from a building and its surroundings, identification of the seismic phases, reconstruction of the signal transmitted from the building to its surroundings, and estimation of its energy, and polarization analysis. Analysis of recordings of the M4.6 event highlighted that the motion related to the wavefield radiated from the building to the ground was mostly linearly polarized in the radial and transverse planes, while a clear ellipticity was observed only in the horizontal plane. The wavefield radiated from the building might be dominated by unconventionally polarized surface waves, i.e., quasi-Rayleigh waves or a combination of quasi-Rayleigh and quasi-Love waves. The results indicated that the energy transmitted from the analyzed vibrating building to its surroundings was significant and decreased the ground motion shaking due to the out-of-phase motion.
Methane emission by terrestrial invertebrates is restricted to millipedes, termites, cockroaches, and scarab beetles. The arthropod-associated archaea known to date belong to the orders Methanobacteriales, Methanomassiliicoccales, Methanomicrobiales, and Methanosarcinales, and in a few cases also to nonmethanogenic Nitrososphaerales and Bathyarchaeales. However, all major host groups are severely undersampled, and the taxonomy of existing lineages is not well developed. Full-length 16S rRNA gene sequences and genomes of arthropod-associated archaea are scarce, reference databases lack resolution, and the names of many taxa are either not validly published or under-classified and require revision. Here, we investigated the diversity of archaea in a wide range of methane-emitting arthropods, combining phylogenomic analysis of isolates and metagenome-assembled genomes (MAGs) with amplicon sequencing of full-length 16S rRNA genes. Our results allowed us to describe numerous new species in hitherto undescribed taxa among the orders Methanobacteriales (Methanacia, Methanarmilla, Methanobaculum, Methanobinarius, Methanocatella, Methanoflexus, Methanorudis, and Methanovirga, all gen. nova), Methanomicrobiales (Methanofilum and Methanorbis, both gen. nova), Methanosarcinales (Methanofrustulum and Methanolapillus, both gen. nova), Methanomassiliicoccales (Methanomethylophilaceae fam. nov., Methanarcanum, Methanogranum, Methanomethylophilus, Methanomicula, Methanoplasma, Methanoprimaticola, all gen. nova), and the new family Bathycorpusculaceae (Bathycorpusculum gen. nov.). Reclassification of amplicon libraries from this and previous studies using this new taxonomic framework revealed that arthropods harbor only CO2 and methyl-reducing hydrogenotrophic methanogens.
Numerous genus-level lineages appear to be present exclusively in arthropods,suggesting long evolutionary trajectories with their termite, cockroach, and millipede hosts, and a radiation into various microhabitats and ecological nichesprovided by their digestive tracts (e.g., hindgut compartments, gut wall, or anaerobic protists). The distribution patterns among the different host groups are often complex, indicating a mixed mode of transmission and a parallel evolution of invertebrate and vertebrate-associated lineages.