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Different environmental samples reveal that methanogenic Archaea are part of a multi-species biofilm on corroding metallic structures (Fig. 1). Studies on microbial influenced corrosion (MIC) focus mainly on sulphate reducing Bacteria (SRB), leading to the assumption that they are exclusively responsible for metal corrosion. In fact, methanogenic Archaea are known to be involved in metal corrosion as well (e.g. Methanococcus maripaludis DSM 2067). In some cases SRB and methanogenic Archaea have comparable high corrosion rates. However, the underlying mechanisms causing corrosion are still unknown. The goal of this study is to analyse two environmental isolates (M. maripaludis DSM 2067, M. maripaludis KA1) and two human-related isolates (Methanobrevibacter oralis and Methanobrevibacter smithii) for their ability to deteriorate/transform metals, which are relevant for technical and clinical applications. Moreover, the studies will provide essential information on the interaction mechanisms of human-related Archaea, which are frequently found in peri-implantitis, with dental material such as implants, crowns and bridges leading to their degradation/ transformation.
Microbiologically influenced corrosion (MIC) of iron is usually attributed to sulfate-reducing microorganisms, either chemically (formation of hydrogen sulfide) or electrically (direct electron uptake). Methanogenetic Archaea are also known to be involved in iron corrosion, forming a multi-species biofilm on corroding metallic structures. However, mechanistic details and kinetics of the overall process in methanogen-induced MIC are poorly understood.
Biofilms are ubiquitous in nature and in the man-made environment. Given their harmful effects on human health, an in-depth understanding of biofilms and the monitoring of their formation and growth are important. Particularly relevant for many metabolic processes and survival strategies of biofilms is their extracellular pH. However, most conventional techniques are not suited for minimally invasive pH measurements of living biofilms. Here, a fluorescent nanosensor is presented for ratiometric measurements of pH in biofilms in the range of pH 4.5–9.5 using confocal laser scanning microscopy. The nanosensor consists of biocompatible polystyrene nanoparticles loaded with pH-inert dye Nile Red and is surface functionalized with a pH-responsive fluorescein dye. Its performance was validated by fluorometrically monitoring the time-dependent changes in pH in E. coli biofilms after glucose inoculation at 37 °C and 4 °C. This revealed a temperature-dependent decrease in pH over a 4-h period caused by the acidifying glucose metabolism of E. coli. These studies demonstrate the applicability of this nanosensor to characterize the chemical microenvironment in biofilms with fluorescence methods.
In many bacteria, the biofilm-promoting second messenger c-di-GMP is produced and degraded by multiple diguanylate cyclases (DGC) and phosphodiesterases (PDE), respectively. High target specificity of some of these enzymes has led to theoretical concepts of "local" c-di-GMP signaling. In Escherichia coli K-12, which has 12 DGCs and 13 PDEs, a single DGC, DgcC, is specifically required for the biosynthesis of the biofilm exopolysaccharide pEtN-cellulose without affecting the cellular c-di-GMP pool, but the mechanistic basis of this target specificity has remained obscure. DGC activity of membrane-associated DgcC, which is demonstrated in vitro in nanodiscs, is shown to be necessary and sufficient to specifically activate cellulose biosynthesis in vivo. DgcC and a particular PDE, PdeK (encoded right next to the cellulose operon), directly interact with cellulose synthase subunit BcsB and with each other, thus establishing physical proximity between cellulose synthase and a local source and sink of c-di-GMP. This arrangement provides a localized, yet open source of c-di-GMP right next to cellulose synthase subunit BcsA, which needs allosteric activation by c-di-GMP. Through mathematical modeling and simulation, we demonstrate that BcsA binding from the low cytosolic c-di-GMP pool in E. coli is negligible, whereas a single c-di-GMP molecule that is produced and released in direct proximity to cellulose synthase increases the probability of c-di-GMP binding to BcsA several hundred-fold. This local c-di-GMP signaling could provide a blueprint for target-specific second messenger signaling also in other bacteria where multiple second messenger producing and degrading enzymes exist.
To investigate early stage corrosion processes of stainless steel 1.4301 taking place during the biofilm formation of the organism Shewanella putrefaciens electrochemical impedance spectroscopy (EIS) in a multielectrode approach has been used. The multielectrode array consisted of up to 25 electrically isolated electrodes made of stainless steel wires of diameters ranging from 100 µm to 500 µm. They were connected to a multichannel microelectrode analyzer (MMA) electrically coupled through zero resistance ammeters. Current flow between electrodes in the array as well as changes in impedance of individual electrodes over time were recorded and analyzed with respect to the onset of localized corrosion and biofilm formation. The results were complemented by optical microscopy, SEM and AFM images which were taken immediately after the respective experiment. To verify that the multielectrode arrays correctly indicated the initial stages of the corrosion process and of biofilm formation they were introduced in a flow cell reaction vessel containing test specimens made from stainless steel 1.4301, which were checked regularly for signs of localized corrosion and biofilms. Preceding results with the multielectrode array in solutions containing high amounts of chloride ions and hydrogen peroxide at low pH also showed that it is possible with the MMA to monitor individual electrodes becoming local anodes as local corrosion set in, while the remaining electrodes predominantly acted as cathodes.
Biofilms cause complications and high costs in both industry and medicine. Of particular interest are bacterial infections of prosthetic materials, which usually cannot be eliminated due to the high antibiotic resistance known for bacteria forming biofilms. The search for new materials and coatings with lower colonization potential and antibacterial activity is of great importance to reduce biofilm formation. However, there is no standardized procedure to examine the colonization characteristics of bacteria in the Biofilm state in situ. Here, we describe an automated epifluorescence microscopy system for the semi-quantitative analysis of three-dimensional (3D) biofilms on various surfaces. To analyze adherent bacteria, three materials (glass, steel and titanium) were incubated with bacteria in a flow chamber system. After fluorescence staining of the bacteria, automated image capturing, quantification of the bacteria, measurement of the colonized area and determination of the 3D biofilm height were carried out by using novel software.
Furthermore, the materials were examined for their surface topography using white light scanning interferometry. Titanium compared to glass showed a significantly higher number of adherent bacteria.
We argue that this was due to the higher microroughness of titanium. The colonized area was in accordance with the number of adherent bacteria and was also significantly larger on titanium coupons compared to glass. Maximum 3D biofilm height on glass coupons was significantly lower compared to the ones on steel and titanium. This novel method enables the standardized, automated investigation of the colonization with bacteria on different materials. This approach can considerably support the characterization of new material surfaces and their innovative coatings by analyzing the amount of attached Bacteria and thickness of biofilms in situ and eliminates the need of conventional cultivation.
In this study, femtosecond laser-induced sub-micrometer structures are generated to modify polyethylene (PE) surface topographies. These surfaces were subjected to bacterial colonization studies with Escherichia coli and Staphylococcus aureus as test strains. The results reveal that the nanostructures do not influence S. aureus coverage, while the adhesion of E. coli is reduced.
Materials are subject to environmental constraints that include biological, chemical and physical factors. To gain confidence about durability and long-term performance of any material, environmental resistance testing procedures have to be amended with modern simulation procedures that include biological components. In fact, any environmentally exposed surface at temperatures lower than 121 °C will be home to microbial growth, even at high salt concentrations, extreme pH, environmental pollution, low water potential, and intense irradiation – everywhere where water is liquid and available. As a consequence, complex microbial ecosystems called biofilms are self-sufficient and found on almost all solid-air-water interfaces. Obviously, environmental changes perturb biofilm development but over a number of seasons, these changes result in relatively stable microbial communities peculiar and adapted to a particular niche and material. Certain microbial settlers are indicative of, and in a real sense mark, a particular biofilm and can, thus, be considered as “reference organisms”. Characteristic reference organisms’ peculiar to specific material-inhabiting communities can be isolated, identified, characterised and used in standard test procedures as well as research into materials science (materials improvement). In this presentation classical microbiological, genetic and molecular methods for studying reference organisms and their roles in materials deterioration will be presented. We will present a set of different reference organisms that are currently in focus of our research and testing development.
In recent years, the demand for new and sustainable products has been constantly rising. Especially cementitious materials are known for their high carbon footprint and novel approaches will be needed to counterbalance that. The BAM departments 7.1 (building materials) and 4.0 (Material and the environment) try to improve the sustainability of concrete panels by establishing a biofilm on the weather protection layer. Using an ultra-high-performance-concrete allows the production of very thin facade tiles with a small carbon footprint. Furthermore, the durability of these tiles is expected to surpass the one of “normal” concrete facades and offer the possibility of modular renewing of defective tiles instead of a wall, or even remodeling a whole building. The controlled application of biofilms on facades aims to improve biodiversity, microclimate, and air quality in cities. Furthermore, the greening of typically gray surfaces could improve the mental health of the residents. The project focuses on testing a multiplicity of concrete samples, varying e.g., in roughness or pH. The bioreceptivity is analyzed via laboratory tests, as well as in perennial outdoor experiments.
Understanding the fundamentals of bioreceptivity enables the developement of functionalized materials. Concrete as the most used building material worldwide is of special interest as microbially greened panels may represent an alternative to classic façade greening with plants.
As standards are not ye established, material characterization in context as well as bioreceptivity assessment itself has been proven to be difficult. The presentation reviews first results of methods adapted for this application.