4 Material und Umwelt
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Organisationseinheit der BAM
- 4 Material und Umwelt (136) (entfernen)
Paper des Monats
- ja (3)
Eingeladener Vortrag
- nein (27)
The growth rate of single bacterial cells is continuously disturbed by random fluctuations in biosynthesis rates and by deterministic cell-cycle events, such as division, genome duplication, and septum formation.
It is not understood whether, and how, bacteria reject these growth-rate disturbances. Here, we quantified growth and constitutive protein expression dynamics of single Bacillus subtilis cells as a function of cell-cycle progression. We found that, even though growth at the population level is exponential, close inspection of the cell cycle of thousands of single Bacillus subtilis cells reveals systematic deviations from exponential growth.
Newborn cells display varying growth rates that depend on their size. When they divide, growth-rate Variation has decreased, and growth rates have become birth size independent. Thus, cells indeed compensate for growth-rate disturbances and achieve growth-rate homeostasis. Protein synthesis and growth of single cells displayed correlated, biphasic dynamics from cell birth to division. During a first phase of variable duration, the absolute rates were approximately constant and cells behaved as sizers. In the second phase, rates increased, and growth behavior exhibited characteristics of a timer strategy. These findings demonstrate that, just like size homeostasis, growth-rate homeostasis is an inherent property of single cells that is achieved by cell-cycle-dependent rate adjustments of biosynthesis and growth.
This thesis addresses the development of a methodological approach for the non-invasive identification of colourants and for the classification of binding media in reverse glass paintings from the early 20th century. For this purpose, mobile and miniaturized devices were used to measure the paintings in situ. The methodology includes X-ray fluorescence (XRF), VIS spectroscopy (VIS), Raman spectroscopy and diffuse reflectance infrared Fourier transform spectroscopy (DRIFTS). In a first step the capabilities of DRIFTS for binding media classification and pigment identification were tested.
DRIFTS enables, besides Raman spectroscopy, the collection of molecular information of a substance that can be used as characteristic fingerprint spectrum. However, the simultaneous collection of both specular (surface) and diffuse (volume) reflection leads to complicated mixed DRIFT spectra, that can vary strongly for one substance depending on the dominant fraction of reflected light. Specular reflection causes several spectral distortions like inverted bands, band shifts and derivative-like features whereas pure diffuse reflections leads to an intensity enhancement of combination bands and overtones. Both specular and diffuse reflection cannot be optically separated, and their proportion depends on material properties like the absorption coefficient and the refractive index as well as on Parameters like surface roughness, porosity, grain size and angle of incidence and detection. A direct comparison of DRIFT spectra with IR spectra of other methods (e.g. transmission, ATR) is not possible, hence the creation of DRIFTS databases was needed. The next step was the complimentary utilization of Raman spectroscopy and DRIFTS for the dentification of synthetic organic colourants. Such colourants are in the further chapters called synthetic organic pigments (SOP) even when it’s not always entirely clear if they are soluble dyes or pigments that are practically insoluble in the medium in which they are incorporated. Raman spectroscopy is generally the method of choice when dealing with SOP, but fluorescence can hamper the Raman spectrum severely, inhibiting the proper identification of the pigment.
DRIFTS was successfully applied and several SOP like synthetic alizarin (PR83), the yellow azo pigments (e.g. PY1) or the red and orange β-naphthol pigments (e.g. PR3) could be identified in the paintings solely by means of DRIFTS. The holistic methodological sequence was defined after the successful establishment of DRIFTS as serious analytical alternative. As the time is always the most limiting factor for in situ measurement campaigns in museums, the 9
sequence needs to be time saving but also efficient. The methodology starts with quick measurements by XRF and VIS to get a first idea of the pigment composition, followed by the validation of the results with the vibrational spectroscopies for selected points.
Measurements of reverse glass paintings by Carlo Mense and Wassily Kandinsky were conducted to test the entire procedure. A high number of pigments could be identified, including several rare ones like strontium white (SrSO4), PR60 and PB52. The binding media were classified using the previously recorded references. The results were set in the art historian context and were discussed in a multidisciplinary way. The influence of Asian art, especially of Chinese reverse glass paintings as source of inspiration for artists of the “Blauer Reiter” collective (e.g. Wassily Kandinsky, Gabriele Münter, Franz Marc und Heinrich Campendonk) is shown. Non-invasive measurements of two Chinese reverse glass paintings from the late 19th and early 20th century were conducted, enabling a comparison of the palettes of Chinese and European painters. The Chinese palette includes heavy use of red lead and orpiment, pigments that were hardly sed in Europe anymore. More modern pigments like zinc white, cadmium yellow, viridian, chromates, cobalt blues or SOP were not found at all in the Chinese paintings.
The evolutionary success of insects is promoted by their association with beneficial microbes that enable the utilization of unusual diets. The synanthropic clothing moth Tineola bisselliella provides an intriguing example of this phenomenon. The caterpillars of this species have adapted to feed on keratin-rich diets such as feathers and wool, which cannot be digested by most other animals and are resistant to common digestive enzymes. Inspired by the hypothesis that this ability may be conferred by symbiotic microbes, we utilized a simple assay to detect keratinase activity and a method to screen gut bacteria for candidate enzymes, which were isolated from feather-fed larvae. The isolation of DNA from keratin-degrading bacterial strains followed by de novo genome sequencing resulted in the identification of a novel bacterial strain related to Bacillus sp. FDAARGOS_235. Genome Annotation identified 20 genes with keratinase domains. Proteomic analysis of the culture supernatant from this gut bacterium grown in non-nutrient buffer supplemented with feathers revealed several candidate enzymes potentially responsible for keratin degradation, including a thiol-disulfide oxidoreductase and multiple proteases. Our results suggest that the unusual diet of T. bisselliella larvae promotes their association with keratinolytic microorganisms and that the ability of larvae to feed on keratin can at least partially be attributed to bacteria that produce a cocktail of keratin-degrading enzymes.
Biofilm formation in industrial or medical settings is usually unwanted and leads to serious health problems and high costs. Inhibition of initial bacterial adhesion prevents biofilm formation and is, therefore, a major mechanism of antimicrobial action of surfaces. Surface topography largely influences the interaction between bacteria and surfaces which makes topography an ideal base for antifouling strategies and eco-friendly alternatives to chemical surface modifications. Femtosecond laser-processing was used to fabricate sub-micrometric surface structures on silicon and stainless steel for the development of antifouling topographies on technical materials.
What Does Ectoine Do to DNA? A Molecular-Scale Picture of Compatible Solute−Biopolymer Interactions
(2020)
Compatible solutes are accumulated in the cytoplasm of halophilic microorganisms. These molecules enable their survival in a high salinity environment. Ectoine is such a compatible solute. It is a zwitterionic molecule which strongly interacts with surrounding water molecules and changes the dynamics of the local hydration shell. Ectoine interacts with biomolecules such as lipids, proteins and DNA. The molecular interaction between ectoine and biomolecules in particular the interaction between ectoine and DNA is far from being understood.
In this paper we describe molecular aspects of the interaction between ectoine and double stranded DNA(dsDNA). Two 20 base pairs long dsDNA fragments were immobilized on a Gold surface via a thiol-tether. The interaction between the dsDNA monolayers with diluted and concentrated ectoine solutions was examined by means of X-ray photoelectron and polarization modulation infrared reflection absorption spectroscopies (PM IRRAS). Experimental results indicate that the ability of ectoine to bind water reduces the strength of hydrogen bonds formed to the ribose-phosphate backbone in the dsDNA. In diluted (0.1 M) ectoine solution, DNA interacts predominantly with water molecules. The sugar-phosphate backbone is involved in the formation of strong hydrogen bonds to water, which with elapsing time leads to a reorientation of the planes of nucleic acid bases. This reorientation destabilizes the hydrogen bonds strength between the bases and leads to a partial dehybridizaiton of the dsDNA. In concentrated ectoine solution (2.5 M), almost all water molecules interact with ectoine. Under this condition ectoine is able to interact directly with DNA. Density functional theory (DFT) calculations demonstrate that the direct interaction involves the nitrogen atoms in ectoine and phosphate groups in the DNA molecule. The results of the quantum chemical calculations Show that rearrangements in the ribose-phosphate backbone, caused by a direct interaction with ectoine, facilitates contacts between O atom in the phosphate group and H atoms in a nucleic acid base. In the PM IRRA spectra, an increase in the number of the IR absorption modes in the base pair frequency region proves that the hydrogen bonds between bases become weaker.
Thus, a sequence of reorientations caused by interaction with ectoine leads to a breakdown of hydrogen bonds between bases in the double helix.
Recent research has suggested that some of the inks used in Herculaneum papyri do not consist of pure carbon. Starting from this finding, in June 2018 a preliminary campaign of analysis by means of X-Ray fluorescence (XRF) of external portions removed mechanically from their original rolls in the eighteenth century (the so-called scorze) took place at the Biblioteca Nazionale at Naples. Also in this case, the aim of the survey was to investigate the ink composition in order to detect possible traces of metal. This article sums up the results of this survey.
Im Rahmen des Forschungsvorhabens wurde die biologische Prüfmethode der Checkliste zur stoffli-chen Bewertung im Rahmen des Aufnahmeverfahrens für weitere Topfkonservierungsmittel in den Anhang 1 zur Vergabegrundlage RAL-UZ102 „Emissionsarme Innenwandfarben“ überarbeitet. Der Test für den Einsatz von Konservierungsmitteln in seiner jetzigen Fassung besteht seit nahezu 20 Jah-ren und erfolgt ausschließlich an weißer Dispersionsfarbe für den Innenraum. Die hierbei ermittelten Höchstmengen für den Einsatz von Topfkonservierern werden z.Zt. auch auf andere Innenraumbau-produkte übertragen. Ziel war es zu klären, ob die Anforderungen an die Topfkonservierung bei Far-ben tatsächlich für andere Innenraumbauprodukte übernommen werden können. Die im Vorhaben durchgeführten Versuche deuten darauf hin, dass dies nicht ohne weiteres möglich ist. Nach Rückspra-che mit Vertretern aus der Industrie wurde das Keimspektrum für die Prüfung zudem um Hefe- und Schimmelpilze erweitert. Des Weiteren wurde eine künstliche Alterung eingeführt und überprüft, ob dies einen Einfluss auf den Gehalt an Isothiazolinonen hat. Die Konzentration von Isothialzolinonen wurde mittels Ultra-Hochleistungsflüssigkeitschromatographie kontrolliert und hinsichtlich einer Kor-relation mit dem Wachstum von Mikroorganismen ausgewertet. Da die in den Innenraumbauproduk-ten zugesetzten Isothiazolinone als Kontaktallergene bekannt sind, ist es ein Ziel des „Blauen Engel“-Umweltzeichens, die geringste erforderliche Menge an Konservierungsmittel in den Produkten zu ver-wenden, ohne die positive Auswirkung der Topfkonservierung zu gefährden. Daher sind die Optimie-rung der Leistungsstärke von Konservierungsmitteln und die Kontrolle der Hygiene im Herstellungs-prozess von zunehmender Bedeutung. Um Einblicke in den Herstellungsprozess von Farben zu gewin-nen, wurden im Rahmen des Vorhabens vier Farbwerke besichtigt, in denen weiße Innenraumfarben produziert werden, die mit dem Umweltzeichen „Blauer Engel“ ausgezeichnet sind. Gemeinsam mit den Fachleuten vor Ort wurde diskutiert, welche Maßnahmen zur Verbesserung der Werkshygiene er-griffen werden können, um den Einsatz von Topfkonservierern möglichst gering zu halten. Des Weite-ren wurde in dem Forschungsvorhaben untersucht, ob eine schnellere Bestimmung der Keimzahl in den Rohstoffen mittels quantitativer Polymerasekettenreaktion bereits im Farbwerk realisierbar ist.
The Brazilian sugarcane industry produced around 173 million tons (Mt) of bagasse in 2018. Bagasse is a by-product of juice extraction for ethanol and sugar production and is combusted in order to generate power, producing up to 10 Mt of ash per year. This ash contains various concentrations of plant nutrients, which allow the ash to be used as a crop fertilizer. However, the concentration and extractability of phosphorus (P), an essential plant nutrient, are low in bagasse ash. To increase the P content, we co-gasified and co-combusted bagasse with P-rich chicken manure. The resulting ash was thermochemically post-treated with alkali additives (Na2SO4 and K2SO4) to increase the availability of P to plants. We aimed to: (i) investigate the effect of thermochemical post-treatment of co-gasification residue and co-combustion ash on P availability to soybeans, (ii) explore the potential of chemical extraction methods (citric acid, neutral ammonium citrate, formic acid, and Mehlich-I) and diffusive gradients in thin films (DGT) to predict the availability of P to soybeans, and (iii) identify the responsible P-phases using X-ray diffraction . We evaluated P availability to soybeans growing in Brazilian Oxisol soil in two independent greenhouse pot experiments. The positive effect of thermochemical treatment on P availability from gasification residue was confirmed through the observation of increased P uptake and biomass in soybean plants. These findings were confirmed by chemical extraction methods and DGT. The gasification residue contained whitlockite as its main P-bearing phase. Thermochemical post-treatment converted whitlockite into highly soluble CaNaPO4. In contrast, co-combustion ash already contained highly soluble Ca(Na,K)PO4 as its main P-bearing phase, making thermochemical post-treatment unnecessary for increasing P availability. In conclusion, increased extractability and availability of P for soybeans were closely connected to the formation of calcium alkali phosphate. Our findings indicate that this combined methodology allows for the prediction of P-fertilization effects of ash.
Stress is a normal part of life for fungi, which can survive in environments considered inhospitable or hostile for other organisms. Due to the ability of fungi to respond to, survive in, and transform the environment, even under severe stresses, many researchers are exploring the mechanisms that enable fungi to adapt to stress. The International Symposium on Fungal Stress (ISFUS) brings together leading scientists from around the world who research fungal stress. This article discusses presentations given at the third ISFUS, held in Sao Jose dos Campos, Sao Paulo, Brazil in 2019, thereby summarizing the state-of-the-art knowledge on fungal stress, a field that includes microbiology, agriculture, ecology, biotechnology, medicine, and astrobiology.
Timber is constantly exposed to environmental influences under outdoor conditions which limits its Lifetime and usability. In order to counteract the damaging processes caused by insects, we have developed a novel and more environmentally friendly method to protect wood materials via covalent modification by organic insecticides. Starting with an important class of synthetic insecticides which are derived from the natural insecticide nicotine, various new carboxylic acid derivatives of imidacloprid were made accessible. These activated neonicotinoids were utilized for the chemical modification of wood hydroxy groups. In contrast to conventional wood preservation methods in which biocides are only physically bound to the surface for a limited time, the covalent fixation of the preservative guarantees a permanent effect against wood pests, demonstrated in standardized biological tests. Additionally, the environmental interaction caused by non-bound neonicotinoids is significantly reduced, since both, a smaller application rate is required and leaching of the active ingredient is prevented. By minimizing the pest infestation, the lifetime of the material increases while preserving the natural appearance of the material.
The Montserrat Codex Miscellaneus (TM 59453/LDAB 552) has been the subject of numerous studies since the publication of ist first text by its owner, father Ramon Roca-Puig. Scholars have dealt with the content of its texts, as well as interrogated its origin and materiality. It is a fourth-century papyrus single quire codex, which contains texts in both Latin and Greek. It has been argued that it belonged to the Bodmer library, connected to a Pachomian library in the Thebaid. In this paper we want to contribute to the material study of the codex by presenting the first results of an archaeometric analysis performed upon the inks. The Analysis was carried out within the framework of the ‘PAThs’ project based at Sapienza University of Rome, and executed with the close cooperation of DVCTVS, a team of scholars who curate the Roca-Puig collection. The results obtained have not only cast light on the history of production of the codex, but also, and perhaps most importantly, point out that a meaningful interpretation of the analytical data is only possible through an interdisciplinary collaboration between the humanities and the natural sciences.
Weltweit werden etwa 80–85 % aller abgebauten Rohphosphate für die Produktion von Düngemitteln verwendet. Bei noch steigendem Bedarf an Phosphor (P) geht man derzeit davon aus, dass die weltweiten P-Reserven noch über 200 Jahre ausreichen. Um den P-Vorrat langfristig abzusichern, sollte der in Reststoffen enthaltene Phosphor möglichst umfänglich genutzt werden. Dieser Forderung trägt das von der Bundesregierung 2012 erstmals beschlossene Deutsche Ressourceneffizienzprogramm ProgRess Rechnung. Rohphosphat wird auch seitens der Europäischen Kommission aufgrundseiner ökonomischen Bedeutung und des unsicheren Angebots als „kritischer Rohstoff“ eingestuft. Vor diesem Hintergrund hat die Bundesregierung in der Verordnung zur Neuordnung der Klärschlammverwertung vom 27. September 2017 in Deutschland eine verpflichtende technische Rückgewinnung von Phosphor für Abwasserbehandlungsanlagen ab einer Ausbaugröße von 100.000 Einwohnerwerten (12 Jahre nach Inkrafttreten der Verordnung) bzw. ab einer Ausbaugröße von über 50.000 Einwohnerwerten (15 Jahre nach Inkrafttreten der Verordnung) vorgeschrieben. Die Verordnung enthält keine Vorgaben hinsichtlich der anzuwendenden Technologie bei der Phosphorrückgewinnung. Ausgenommen von der Rückgewinnungspflicht sind Klärschlämme mit niedrigen Phosphorgehalten (weniger als 20 Gramm Phosphor je Kilogramm Klärschlamm-Trockenmasse). Auch die im Jahre 2017 verabschiedeten neuen Rechtsvorschriften für die Düngung verlangen zukünftig einen nachhaltigen und ressourceneffizienten Umgang mit Nährstoffen bei der landwirtschaftlichen Erzeugung und schränken die P-Zufuhr insbesondere auf hoch versorgten Böden ein (Düngeverordnung vom 26. Mai 2017). Dies wird zu einem mehr am Pflanzenbedarf orientierten und ggf. vermehrt überbetrieblichen Einsatz von wirtschaftseigenen Düngern führen. Um den politischen und gesetzlichen Anforderungen gerecht zu werden, müssen einerseits wirksame und kosteneffiziente technische Verfahren zum P-Recycling (weiter)entwickelt werden. Andererseits müssen die Recyclingprodukte die Anforderungen für eine direkte Verwendung in der Landwirtschaft oder als Rohstoff für die Herstellung von Düngemitteln erfüllen. In dem vorliegenden Standpunkt wird zunächst der potenzielle Beitrag von Reststoffen zur Deckung des P-Bedarfs in der deutschen Pflanzenproduktion geschätzt. Für die wichtigsten Reststoffe werden technische Verfahren zur P-Rückgewinnung bzw. Aufarbeitung skizziert. Auf Basis der Anforderungen der Landwirtschaft bzw. der Düngemittelindustrie
an die P-Recyclingprodukte werden deren Herstellungsverfahren bewertet. Schließlich wird der Regelungs- und Forschungsbedarf formuliert.
New antibacterial agents are urgently required to fight the emergence of antibiotic-resistant bacteria. We recently synthesized the first thioimidazolium ionene, which has antibacterial properties and can degrade in various media. This dual functionality is crucial in order to limit the environmental impact of these biocides. We have found that our polymer is stronger than benzalkonium chloride (BAC) against Pseudomonas aeruginosa and also readily degrades in the presence of base, while remaining stable in acidic environments. These results highlight a new emerging class of antibacterial degradable polymers.
The application of fracture mechanics to the determination of the fatigue behavior of weldments is discussed with the focus on classic fatigue, i.e., the overall fatigue life and the fatigue strength in terms of an S-N curve and the endurance limit. The following issues are addressed: specific features of short fatigue crack propagation, an adequate initial crack size, multiple crack propagation and its statistical treatment as well as welding residual stresses. As an example, an approach of the authors is applied to the determination of FAT classes for a butt weld with varying weld toe geometry.
In the present study, a simple approach was used to investigate the effect of UV-exposure on two high density Polyethylene materials (PE-HD), commonly used for storage tanks, on fuel sorption behavior and colonization by microorganisms. The aim was to investigate whether the sorption behavior of the fuels (diesel/biodiesel) and the colonization by microorganisms, frequently occurring in the fuel, is affected and may lead to undesirable or safety-relevant material changes. We showed that the UV-irradiation leads to significant changes of the sorption behavior due to chemi-crystallization and crosslinking. The fuel Sorption is affected by the UV-induced formation of polar carbonyl and hydroxyl groups predominantly occurring at the surface. With respect to microbial colonization behavior for Bacillus subtilis and Pseudomonas aeruginosa, isolated from a contaminated diesel sample, differences of the initial adhesion could be shown depending on the initial type of polyethylene as well as on the degree of UV-induced degradation.
An interdisciplinary approach to the study of manuscript traditions is here applied to the analysis of the leaves from the White Monastery, one of the greatest centres of literary production in Late Antique Egypt. In the framework of the ‘PAThs’ project, archaeometric analyses complement the information pieced together by a range of disciplines in the field of humanities. The use of different complementary analytical techniques provides information on the type of ink used and its elemental composition, unveiling interesting details regarding the materials and methodology of manufacturing of writing media. Moreover, this contribution takes a step forward and discusses the possible existence of a regional arrangement in the elemental composition revealed in the inks studied.
Phosphorus (P) fertilizers from secondary resources became increasingly important in the last years. However, these novel P-fertilizers can also contain toxic pollutants such as chromium in its hexavalent state (Cr(VI)). This hazardous form of chromium is therefore regulated with low limit values for agricultural products even though the correct determination of Cr(VI) in these fertilizers may be hampered by redox processes, leading to false results. Thus, we applied the novel diffusive gradients in thin-films (DGT) technique for Cr(VI) in fertilizers and compared the results with the standard wet chemical extraction method (German norm DIN EN 15192) and Cr K-edge X-ray Absorption near-edge structure (XANES) spectroscopy. We determined an overall good correlation between the wet chemical extraction and the DGT method. DGT was very sensitive and for most tested materials selective for the analysis of Cr(VI) in P-fertilizers. However, hardly soluble Cr(VI) compounds cannot be detected with the DGT method since only mobile Cr(VI) is analyzed. Furthermore, Cr K-edge XANES spectroscopy showed that the DGT binding layer also adsorbs small amounts of mobile Cr(III) so that Cr(VI) values are overestimated. Since certain types of the P fertilizers contain mobile Cr(III) or partly immobile Cr(VI), it is necessary to optimize the DGT binding layers to avoid aforementioned over- or underestimation. Furthermore, our investigations showed that the Cr K-edge XANES spectroscopy technique is unsuitable to determine small amounts of Cr(VI) in fertilizers (below approx. 1% of Cr(VI) in relation to total Cr).