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RNA virus populations are composed of highly diverse individuals that form a cloud of related sequences commonly referred to as a ‘quasispecies’1–3. This diversity arises as a consequence of low-fidelity genome replication4,5. By contrast, DNA Virus populations contain more uniform individuals with similar fitness6.
Genome diversity is often correlated with increased Fitness in RNA viruses, while DNA viruses are thought to require more faithful genome replication. During DNA replication, erroneously incorporated bases are removed by a 3′-5′ exonuclease, a highly conserved enzymatic function of replicative DNA but not RNA polymerases. This proofreading process enhances replication fidelity and ensures the genome integrity of DNA organisms, including large DNA viruses7. Here, we show that a herpesvirus can tolerate impaired exonucleolytic proofreading, resulting in DNA virus populations, which, as in RNA viruses8, are composed of highly diverse genotypes of variable individual fitness. This indicates that herpesvirus mutant diversity may compensate for individual Fitness loss. Notably, in vivo infection with diverse virus populations results in a marked increase in virulence compared to genetically homogenous parental virus. While we cannot exclude that the increase in virulence is caused by selection of and/or interactions between individual genotypes, our findings are consistent with quasispecies dynamics. Our results contrast with traditional views of DNA virus replication and evolution, and indicate that a substantial increase in population diversity can lead to higher virulence.
SRB are environmentally and industrially important microorganisms. The disadvantage of their metabolic activity (e.g. sulfate reduction) results in the formation of toxic sulfide that leads to microbial influenced corrosion. SRB have been responsible for biocorrosion of ferrous metal. One of mitigation strategy is the use of biocides. However, it has been shown that various bacteria develop antimicrobial resistance due to excessive use of biocides. Thus, a deeper understanding of the evolution of biocide resistance of SRB is necessary. Three commonly used biocides, THPS, BAC, and GLUT were applied to investigate the susceptibility of Desulfovibrio alaskensis G20.The minimum inhibitory and bactericidal concentration and the killing kinetics of the three biocides was determined. These results will be used to conduct evolution experiments to determine the evolution of resistance towards biocides of SRBs. The outcome of this work can be helpful to improve the management of MIC treatments.
Permanente und nachhaltige Deckung von Grundbedürfnissen der Nahrungs- und Materialversorgung, aber auch das Ausnutzen von Arbeitshilfen, der Gebrauch von Versuchstieren in der Wissenschaft und die Freude an tierischer Begleitung in der Freizeit waren Beweggründe für die Domestikation von Tieren. Haustiere gehen auf eine zu ihrer Art gehörige Stammform einer Wildtierart zurück. Haustier und Wildtier sind somit Angehörige einer biologischen Spezies. Bei der Domestikation von Tieren spielte zwischenartliche Introgression keine Rolle. Die Domestikation von Haustieren durch Separation von kleinen Gruppen von Wildtieren erfolgte nur wenige Male an wenigen Orten (primäre Domestikationszentren). Haustiere bilden artübergreifend auffällig ähnliche morphologische und ethologische Merkmale aus (Domestikationssyndrom). Domestikation bei Wirbeltieren erfolgt primär über Selektion auf zutrauliches und zahmes Verhalten und unterliegt einem sehr komplexen pleiotropen Netzwerk von Regelkreisen. Die Domestikation ist ein koevolutiver Prozess und das Resultat eines bilateralen wechselseitigen Zusammenfindens von Prädispositionen und reziproken Valenzen der jeweiligen Partner von Haustier und Mensch.
The exposure to antimicrobial substances drives the evolution of antimicrobial resistance. Biocides are antimicrobials used as disinfectants, antiseptics and preservatives. They find application on a large scale in the industrial and medical sector, but also in private households. In terms of mass, the worldwide use of biocides exceeds that of antibiotics. Thus, despite their important role in preventing the spread of pathogens, due to their ubiquity, biocides are suspected to be drivers of the antimicrobial resistance crisis. In our work at BAM we try to understand how biocides contribute to the emergence of AMR, what the underlying adaptation principles and mechanisms are and how they compare to those found for antibiotics. Within our group, I mainly focus on the following two questions: How does phenotypic heterogeneity in bacteria affect the ability to survive treatment with biocides? And what are the consequences of phenotypic heterogeneity for the evolution of resistance to biocides and antibiotics?
I will share published and unpublished results which demonstrate that phenotypic heterogeneity can enable the survival of biocide treatment and, through this, facilitate the evolution of AMR. On the other hand, we find that adaptation to a biocide can unexpectedly impair the ability to evolve resistance against an antibiotic.
While sociality is present in a taxonomically diverse number of species, most animals remain solitary (Bourke, 2011). Over the last centuries, this apparent imbalance in social and non-social animals has led to a great deal of research aimed at shedding light on the biotic and abiotic factors explaining the emergence and maintenance of sociality in nature (West et al., 2015).
Among them, microbes were quickly identified as a major problem for the evolution of social life, because frequent contact between group members typically facilitates the transmission of pathogens, high nest fidelity favours the establishment of microbial pathogens close to their social hosts and, finally, because social groups often exhibit limited genetic diversity and thus limited genetic resistance against certain pathogen strains (Schmid-Hempel, 1998; Cremer et al., 2007). However, this long-standing view has changed considerably over the last few years. Recent research indeed revealed that group living may be more effective than solitary living to Limit the risk of infection by pathogenic microbes because group living also allows the development of an additional layer of defence against pathogens in the form of social immunity (Cremer et al., 2007; Cotter and Kilner, 2010). Under strong pressure from pathogens, microbes could therefore promote, rather than hinder, the evolutionary transition from solitary to group Living (Meunier, 2015; Biedermann and Rohlfs, 2017). Moreover, we are increasingly aware that many microbes provide essential benefits to their hosts by performing critical digestive, physiological, and reproductive functions (Engel and Moran, 2013; McFall-Ngai et al., 2013). The need to Access beneficial microbes may thus have played a role in the expression of frequent and tight interactions between conspecifics and ultimately promoted social evolution (Wilson, 1971; Onchuru et al., 2018). Finally, a growing number of studies suggest that microbes could enforce the Aggregation and expression of cooperative behaviours of the hosts to increase their chance of reaching new hosts and may therefore be involved in the evolution of host sociality (Lewin-Epstein et al., 2017) (but see Johnson and Foster, 2018).
A short natural and cultural history of the webbing clothes moth (Tineola bisselliella). It is generally accepted that the natural habitats of most pest insects can be found outside the synanthropic environment in layers of leaf litter, under bark, as well as in rodent or bird nests. Indeed, most of the common fabric pests have been reported as being facultative nidicolous. Therefore, infestation of commodities by pest insects out of these reservoirs is one possibility to be considered. However, the likelihood of a pest´s occurrence and survival outside of the synanthropic habitat largely depends on its ecological potential and competitiveness against other species of the same ecological guild. Some pest species are rarely found in wild habitats, especially in those regions where they are not native and where they have been introduced by man.
The fabric pest Tineola bisselliella serves as a good example. Most likely originating from Central or Southern Africa, this insect was introduced into Europe probably not earlier than the late 18th century. Being more tolerant to dry environments than other fabric pests, its economical importance increased during the 20th century when the indoor climate changed because of central heating systems. Its occurrence in outdoor natural habitats must be regarded as accidental. Reported finds of webbing clothes moth larvae in bird nests e. g. have been largely overstated in the literature. Tineola bisselliella should be regarded as an invasive and eusynanthropic species in most parts of the world.
Zahlreiche Insektenarten unter den Käfern und Schmetterlingen besitzen die ökologische Potenz, trockene Materialien pflanzlichen und tierischen Ursprungs als Nahrungs- und Brutsubstrat zu nutzen. Daher findet man diese Tiere auch an und in vom Menschen angelegten Nahrungsvorräten wie z. B. Getreidespeicher, an Kleidungs- und an Gebrauchsgegenständen aus Wolle, Pelzen oder Fellen sowie an oder in natürlichen Baumaterialien wie Holz. Aus wirtschaftlicher Sicht werden sie dann als Vorrats- bzw. Materialschädlinge bezeichnet.
Vorrats- und Materialschädlinge haben sehr ähnliche Lebensstrategien. Sie verfügen über eine breite Toleranz gegenüber abiotischen Umweltparametern und sind in der Regel Nahrungsopportunisten. Sie können längere Zeit ohne Nahrungsaufnahme überdauern und haben unter optimalen Bedingungen hohe Reproduktionsraten.
Es stellt sich die Frage, ob die auffälligen Anpassungen von Vorrats- und Materialschädlingen an einen menschennahen Lebensraum das Resultat von Prädispositionen und Selektion hin zu einem Lebensformtyp „Lager- oder Materialschädling“ sind, oder ob die synanthropen künstlichen (Öko)Systeme nur als überdimensionierte natürliche Reservoire fungieren.
Ökologische und ethologische Prädispositionen und Adaptationen sowie Verbreitungs- und Fortpflanzungsstrategien von Schadinsekten werden hier diskutiert, um phylogenetische und evolutionsbiologische Szenarien beim Übergang von ursprünglichen, also natürlichen Lebensräumen auf relativ jungzeitliche, von Menschen geprägte Habitate, zu rekonstruieren. Die angeführten Beispiele werden im kritischen Bezug zu publizierten Informationen über autökologische, faunistische sowie archäologische und historische Indizien über Ursprung und Ausbreitung von ausgewählten Schadinsekten (Hausbockkäfer, Textilmotten, Kornkäfer) begründet.
Results suggest a reduction in immune gene repertoires in termites and possible complementary expression between termite castes. With comparative genomics we will investigate the evolution of gene families related to immunity, try to understand where reductions and expansions take place and relate these changes to shifts in sociality and ecology. The role of TEs in expansions and contractions of immune gene families will be investigated. For these analyses, we propose to generate high quality, highly contiguous genomes of species from different levels of sociality, covering all major termite families. With comparative transcriptomics we will investigate the expression of immune genes in different castes. Via network analyses we will identify pathways indicated in differential immunity between castes and between species of different sociality levels. We will investigate how these pathways have been rewired along the transitions to higher levels of sociality and how, intra-specifically, they change between castes.
The exposure to antimicrobial substances drives the evolution of antimicrobial resistance (AMR). Biocides are antimicrobials used as disinfectants, antiseptics and preservatives. They find application on a large scale in the industrial and medical sector, but also in private households. In terms of mass, the worldwide use of biocides exceeds that of antibiotics. Thus, despite their important role in preventing the spread of pathogens, due to their ubiquity, biocides are suspected to be drivers of the antimicrobial resistance crisis. In our work we try to understand how biocides contribute to the emergence of AMR, what the underlying adaptation principles and mechanisms are and how they compare to those found for antibiotics.
Here, I present results which demonstrate that phenotypic heterogeneity in E. coli, namely the formation of tolerant persister cells, can enable the survival of disinfection and consequentially facilitate the evolution of AMR. Using experimental evolution that selects for tolerance, we find that mutations in lipid A biosynthesis arise following periodic treatment with benzalkonium chloride (BAC), a widely used disinfectant. BAC tolerance is associated with additional, diverse mutations as well as changes in the susceptibility to antibiotics from different classes and changes in motility and biofilm formation, suggesting extensive regulatory re-wiring in the evolved clones. Remarkably, we find that fitness costs (growth rate reduction) incurred by BAC tolerance are alleviated in the presence of antibiotics. These findings demonstrate the complexity underlying the adaptation to antimicrobials and highlight the links between persistence to disinfectants and resistance evolution to antimicrobials.