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Functional nanomaterials (NM) of different size, shape, chemical composition, and surface chemistry are of increasing relevance for many key technologies of the twenty-first century. This includes polymer and silica or silica-coated nanoparticles (NP) with covalently bound surface groups, semiconductor quantum dots (QD), metal and metal oxide NP, and lanthanide-based NP with coordinatively or electrostatically bound ligands, as well as surface-coated nanostructures like micellar encapsulated NP. The surface chemistry can significantly affect the physicochemical properties of NM, their charge, their processability and performance, as well as their impact on human health and the environment. Thus, analytical methods for the characterization of NM surface chemistry regarding chemical identification, quantification, and accessibility of functional groups (FG) and surface ligands bearing such FG are of increasing importance for quality control of NM synthesis up to nanosafety. Here, we provide an overview of analytical methods for FG analysis and quantification with special emphasis on bioanalytically relevant FG broadly utilized for the covalent attachment of biomolecules like proteins, peptides, and oligonucleotides and address methodand material-related challenges and limitations. Analytical techniques reviewed include electrochemical titration methods, optical assays, nuclear magnetic resonance and vibrational spectroscopy, as well as X-ray based and thermal analysis methods, covering the last 5–10 years. Criteria for method classification and evaluation include the need for a signal-generating label, provision of either the total or derivatizable number of FG, need for expensive instrumentation, and suitability for process and production control during NM synthesis and functionalization.
Biofilms are ubiquitous in nature and in the man-made environment. Given their harmful effects on human health, an in-depth understanding of biofilms and the monitoring of their formation and growth are important. Particularly relevant for many metabolic processes and survival strategies of biofilms is their extracellular pH. However, most conventional techniques are not suited for minimally invasive pH measurements of living biofilms. Here, a fluorescent nanosensor is presented for ratiometric measurements of pH in biofilms in the range of pH 4.5–9.5 using confocal laser scanning microscopy. The nanosensor consists of biocompatible polystyrene nanoparticles loaded with pH-inert dye Nile Red and is surface functionalized with a pH-responsive fluorescein dye. Its performance was validated by fluorometrically monitoring the time-dependent changes in pH in E. coli biofilms after glucose inoculation at 37 °C and 4 °C. This revealed a temperature-dependent decrease in pH over a 4-h period caused by the acidifying glucose metabolism of E. coli. These studies demonstrate the applicability of this nanosensor to characterize the chemical microenvironment in biofilms with fluorescence methods.
N-Benzyl aroyl-S,N-ketene acetals can be readily synthesized by condensation of aroyl chlorides and N-Benzyl 2-methyl benzothiazolium salts in good to excellent yields, yielding a library of 35 chromophores with bright solid-state emission and aggregation-induced emission characteristics.
Varying the substituent from electron-donating to electronwithdrawing enables the tuning of the solid-state emission Color from deep blue to red.
A series of twelve 3-piperazinyl propenylidene indolone merocyanines was synthesized in a one-pot fashion using a consecutive three-component insertion-coupling-Michael addition sequence. Physicalorganic treatment of the absorption data of a consanguineous series of this library allows semiquantitative Linear Free Energy Relationships (LFERs) to be established and confirmation of the positive Absorption solvatochromicity. All Boc-substituted piperazinyl merocyanines display aggregation induced Emission (AIE), which was corroborated for two solvent systems. In particular, crystallization-induced Emission enhancement (CIEE) induced by ultrasonication could be shown for a model chromophore by confocal laser scanning microscopy (CLSM).
Coumarin-rhodamine hybrids-novel probes for the optical measurements of viscosity and polarity
(2017)
A comprehensive systematic study of Absorption and fluorescence properties in solvents of varying viscosity and polarity of three novel and red-emitting coumarin-rhodamine hybrid derivatives with differences in the rigidity of their substituents is presented. This includes ethanol-polyethylene glycol, toluene-polyethylene glycol, and tolueneparaffin mixtures. Moreover, protonation-induced effects on the spectroscopic properties are studied. A viscosity-induced emission enhancement was observed for all coumarin-rhodamine hybrid derivatives. MCR2 bearing a julolidine donor showed the expected low sensitivity to viscosity whereas MCR3 with its freely rotatable diphenylamino Substituent revealed a particularly pronounced sensitivity to this parameter.
Moreover, MCR2 shows an enhancement in Emission in the open, i.e., protonated form in conjunction with a largely Stokes shift fluorescence in the deep red spectral region. This enables the application of these dyes as viscosity sensors and as far red emitting pH-sensitive probes.
We present here the design and characterization of a set of spectral calibration beads. These calibration beads are intended for the determination and regular control of the spectral characteristics of fluorescence microscopes and other fluorescence measuring devices for the readout of bead-based assays. This set consists of micrometer-sized polymer beads loaded with dyes from the liquid Calibration Kit Spectral Fluorescence Standards developed and certified by BAM for the wavelength-dependent Determination of the spectral responsivity of fluorescencemeasuring devices like spectrofluorometers. To cover the wavelength Region from 400 to 800 nm, two new near-infrared emissive dyes were included, which were spectroscopically characterized in solution and encapsulated in the beads. The resulting set of beads presents the first step towards a new platform of spectral calibration beads for the determination of the spectral characteristics of fluorescence instruments like fluorescence microscopes, FCM setups, and microtiter plate readers, thereby meeting the increasing demand for reliable and comparable fluorescence data especially in strongly regulated areas, e.g., medical diagnostics. This will eventually provide the basis for standardized calibration procedures for imaging systems as an alternative to microchannel slides containing dye solutions previously reported by us.
We designed and synthesized triphenylamine based and coumarin fused rhodamine hybrid dyes and characterized using 1H, 13C NMR and HR-LCMS analysis. Both the newly synthesized hybrid dyes were found to show red shifted absorption as well as emissions and large Stokes shift (40e68 nm) as compared to the small Stokes shift (25e30 nm) of reported dyes Rhodamine B and 101. Photophysical properties of these dyes were studied in different solvents and according to the solvents acidity or basicity they preferred to remain in their spirocyclic or open form in different ratio. We studied the spirocyclic as well as open form derivatives of these dyes for their viscosity sensitivity in three different mixture of solvents i.e. polar-protic [EtOH-PEG 400], polar-aprotic [toluene-PEG 400] and non-polaraprotic [toluene-paraffin]. They are found to show very high viscosity sensitivity in polar-protic mixture of solvents [EtOH-PEG 400] and hence concluded that both polarity as well as viscosity factor worked together for the higher emission enhancement rather than only viscosity factor. As these dyes showed very high viscosity sensitivity in their spirocyclic as well as open form, they can be utilized as viscosity sensors in visible as well as deep red region. We also correlated our experimental finding theoretically by using Density Functional theory computations.
Polymer nanoparticles (NPs) are of increasing importance for a wide range of applications in the material and life sciences. This includes their use as carriers for dye molecules and drugs, multichromophoric reporters for signal enhancement strategies in optical assays, targeted probes in bioimaging studies, and nanosensors.[1] Application-relevant properties of such NPs include their size, morphology, colloidal stability, and ease of surface functionalization with e.g., sensor molecules and targeting ligands. Many of these features as well as the interaction of NPs with their microenvironment are closely linked to the knowledge of the chemical nature and total number of surface groups as well as the number of surface functionalities accessible for subsequent coupling reactions of differently sized ligands, biomolecules or reporter molecules. This underlines the importance of simple, robust, reliable, and validated methods, which can be employed for the characterization of a broad variety of particle systems independent of their optical properties, i.e., scattering or the presence of encoding dyes.[2]
In this respect, we assessed a variety of conventional and newly developed colorimetric or fluorometric labels for the optical surface group analysis, utilizing e.g., changes in intensity and/or color for signal generation.[3] Moreover, novel cleavable and multimodal reporters were developed which consist of a reactive group, a cleavable linker, and an optically active moiety, chosen to contain also heteroatoms for straightforward method validation by elemental analysis, ICP-OES, ICP-MS or NMR. In contrast to conventional labels measured bound at the particle surface, which can favor signal distortions by scattering and encoding dyes, cleavable reporters can be detected colorimetrically or fluorometrically both attached at the particle surface and after quantitative cleavage of the linker in the transparent supernatant after particle removal e.g., by centrifugation. Here, we present first results obtained for the optical quantification of carboxylic and amino groups on a series of self-made NPs with different types of labels and compare their potential and drawbacks for surface group analysis.
Polymer nanoparticles (NPs) are of increasing importance for a wide range of applications in the material and life sciences. This includes their application as carriers for e.g., analyte-responsive ligands for DNA sequencing platforms, drugs as well as dye molecules for use as multichromophoric reporters for signal enhancement in optical assays or the fabrication of nanosensors and targeted probes in bioimaging studies. All these applications require surface functionalization of the particles with e.g., ligands, sensor dyes, or analyte recognition moieties like biomolecules, and subsequently, the knowledge of the chemical nature and total number of surface groups as well as the number of groups accessible for coupling reactions. Particularly attractive for the latter are optically active reporters together with sensitive and fast optical assays, which can be read out with simple, inexpensive instrumentation.
We assessed a variety of conventional and newly developed colorimetric and fluorometric labels for optical surface group analysis, utilizing e.g., changes in intensity and/or color for signal generation. Moreover, novel cleavable and multimodal reporters were developed which consist of a reactive group, a cleavable linker, and an optically active moiety, chosen to contain also heteroatoms for straightforward method validation by elemental analysis, ICP-OES, ICP-MS or NMR. In contrast to conventional labels measured bound at the particle surface, which can favor signal distortions by scattering and encoding dyes, cleavable reporters can be detected colorimetrically or fluorometrically both attached at the particle surface and after quantitative cleavage of the linker in the transparent supernatant after particle removal e.g., by centrifugation. Here, we present first results obtained for the optical quantification of carboxylic and amino groups on a series of self-made polystyrene NPs with different types of labels and compare their potential and drawbacks for surface group analysis.
Polymer nanoparticles are of increasing importance for a wide range of applications in the material and life sciences. This includes their application as carriers for e.g., analyte-responsive ligands for DNA sequencing platforms, drugs as well as dye molecules for use as multichromophoric reporters for signal enhancement in optical assays or the fabrication of nanosensors and targeted probes in bioimaging studies.
Application-relevant properties of nanometer- and micrometer-sized particles (NP) include their size (and size distribution), colloidal stability, biocompatibility, and ease of subsequent functionalization, e.g., with linkers, sensor molecules, and targeting ligands. In this respect, the knowledge of the chemical nature, the total number of surface groups and the number of groups accessible for subsequent coupling reactions with differently sized optical labels or biomolecules is mandatory. This requires robust, reliable and validated methods, which can be employed for the characterization of a broad variety of particle systems independent of their optical properties, i.e., scattering or the presence of encoding dyes, and can be preferably performed specifically, sensitively, and fast with inexpensive equipment. Particularly attractive methods are here straightforward colorimetric, and fluorometric assays. In this respect, we studied a variety of conventional labels for optical readout, utilizing e.g., a change in intensity and/or color of absorption and/or emission. While in common assays, most reporters are measured directly at the particle surface, which can easily lead to signal distortions by scattering and encoding dyes, we focus on the development of cleavable and multimodal labels. These labels are detectable both bound at the particle surface and after cleavage of a linker unit in the supernatant with different analytical methods like fluorometry together with elemental analysis, ICP-OES or ICP-MS for straightforward method validation by method comparison. Here, we present our newly-synthesized cleavable labels and their application for photometric quantification of amino, thiol and carboxy surface groups on different types of nanomaterials and compare the results obtained from surface group analysis relying on conventional labels.
