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Eingeladener Vortrag
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he main objective of the nPSize project is to improve the measurement capabilities for nanoparticle size based on both measurement methods traceable to SI units and new reference materials. Two basic approaches have been used in order to develop measurement procedures resulting in traceable results of the nanoparticle size distribution: physical modelling for the methods used in the project (TSEM, SEM, AFM and SAXS) and machine learning.
Physical modelling: In this part, the physical models associated with different shape measurements for the techniques TSEM, SEM, AFM and SAXS have been collected and further developed with the aim to simulate the resulting signal as measured by the individual methods. Uncertainties and traceability associated with each model were investigated and evaluated. In the following, the progress on these physical models is reported for each individual method.
Machine Learning modelling: The aim of this part is to use machine learning to enable automatic measurement of nanoparticle shape from expert a-priori information only. No physical model will be used as a-priori information in this task.
The accuracy and traceability of the size results obtained by each technique will be analyzed and compared with the physical modelling. A machine learning database will then be used to create automatic detection algorithms.
Porous materials are of a great interest due to their ability to interact with ions and molecules not only on their surface but throughout their bulk. Porous materials are conventionally used in applications; such as ion exchange, adsorption/separation and in catalysis, exploiting the huge internal surface area of highly ordered porous materials. [1, 2] The ability for these materials to succeed, in a particular field, is dependent greatly upon the uniformity of the shape and size of the pores within the material. However, despite how well we are able to understand the stability of 3-D frameworks in crystalline or polycrystalline zeolites and ZIFs, there still remains major limitations in fully understanding the synthetic mechanisms occurring prior to their formation. [3, 4] Though the syntheses of a wide variety of porous solids are already well established, their formation mechanisms continue to be of great interest to both academic and industrial communities, with the thought that with greater understanding of the formation of these solids can lead to their rational design. By obtaining a better knowledge of the underlying nucleation mechanisms, it can allow for increased predictability of new structures and in addition can reveal valuable information regarding the particle dimensions aiding in controlling particle morphology and size.
Small-angle and wide-angle X-ray scattering (SAXS/WAXS) are ideal techniques for determining morphological changes in-situ, where the shape, size and crystallinity can be followed at a high temporal resolution, and when these techniques are deployed alongside complimentary techniques, such as ex-situ microscopy, a great deal of information on the formation of materials can be obtained. The above-mentioned methodologies were utilised to study the formation of Silicalite-1 from multiple silica sources to obtain a detailed picture of the formation as a whole, including the formation of intermediate species (Image 1 show the in-situ SAXS data collected from the formation of Silicalite-1 from tetraethyl orthosilicate).
In-situ SAXS/WAXS studies were also utilized to observe the formation of ZIF-8 alongside in-situ X-ray absorption spectroscopy (XAS) experiments to probe both the morphological changes, as well as any changes occurring to the local structure during synthesis (Image 2 show the in-situ SAXS data collected from the formation of ZIF-8). These timeresolved in-situ studies have been utilised to follow changes in crystallinity and crystallite size, whilst also providing valuable information on the formation of intermediate species, the nucleation of crystalline ZIFs, and their subsequent growth.
References:
[1] M E Davis. Nature, 417(6891):813–21, 2002
[2] S T Meek, J A Greathouse, M D Allendorf, Advanced Materials, 23 (2): 249-267, 2011
[3] J Grand, H Awala, CrystEngComm,18 (5): 650–664, 2016
[4] M J V Vleet, T Weng, X Li, J R Schmidt. Chem.Rev.,118 (7): 3681–3721, 2018
X-ray scattering and sorption data associated with the publication "Antiaromatic Covalent Organic Frameworks Based on Dibenzopentalenes". X-ray scattering data is provided for COF and POP materials, including data from stability tests, as three-column ascii files with columns q (nm-1), I (m-1) and uncertainty on I, as well as being provided in 2θ.
This dataset contains the processed and analysed small-angle X-ray scattering data associated with all samples from the publications "Bio-SAXS of Single-Stranded DNA-Binding Proteins: Radiation Protection by the Compatible Solute Ectoine" (https://doi.org/10.1039/D2CP05053F).
Files associated with McSAS3 analyses are included, alongside the relevant SAXS data, with datasets labelled in accordance to the protein (G5P), its concentration (1, 2 or 4 mg/mL), and if Ectoine is present (Ect) or absent (Pure). PEPSIsaxs simulations of the GVP monomer (PDB structure: 1GV5 ) and dimer are also included.
TOPAS-bioSAXS-dosimetry extension for TOPAS-nBio based particle scattering simulations can be obtained from https://github.com/MarcBHahn/TOPAS-bioSAXS-dosimetry which is further described in https://doi.org/10.26272/opus4-55751.
This work was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under grant number 442240902 (HA 8528/2-1 and SE 2999/2-1). We acknowledge Diamond Light Source for time on Beamline B21 under Proposal SM29806. This work has been supported by iNEXT-Discovery, grant number 871037, funded by the Horizon 2020 program of the European Commission.
OpenSCAD, STL and technical drawings for the capillary flow-through cell designed primarily for use with The MOUSE instruments.
This flow-through cell can be used in conjunction with:
- Modular sample holder (10.5281/zenodo.7499416)
- Solid sample rack/plate (10.5281/zenodo.7499424)
- Laser-cut sample holder (10.5281/zenodo.7499437)
Technical drawings and documents for building a compact, heated, vacuum compatible flow-through sample holder. This holder is in use at the BAM MOUSE instrument as well as at the I22 beamline at the Diamond Light Source (see references for instrument details).
This holder has several features:
- The holder can be used in vacuum environments as well as in atmosphere
- It has two G 1/4" UNF fittings to attach HPLC tubing for (optionally) flowing a medium through the sample cell
- There are two additional (unflowed) sample positions for backgrounds and calibrants, held at the same temperature
- The low-mass design coupled with a 250W heating element can achieve heating rates of 1 degree C per second, when coupled (for example) with an Omron E5CC PID controller.
- The sample holder insert can be made from various materials depending on the application. Sealing the sample from the vacuum can be achieved using kapton, teflon or Magic tape, depending on the temperature requirements. The inlet and outlet holes will need to be punctured with a needle to enable flow.
- Large exit cones ensure a clear exit angle of at least 45 degrees two theta.
- It has been tested with temperatures up to 400 degrees C.
- Compression area has been raised and polished to ensure a good vacuum seal.
OpenSCAD, STL and technical drawings for the solid sample rack designed primarily for use with The MOUSE instruments.
This solid sample rack can be used in conjunction with:
- Laser-cut sample holder (10.5281/zenodo.7499437)
- Modular sample holder (10.5281/zenodo.7499416)
- Capillary flow-cell for liquid samples (10.5281/zenodo.7499421)
PDF file for the laser-cut sample holder designed primarily for use with The MOUSE instruments.
This sample holder can be used in conjunction with:
- Solid sample rack/plate (10.5281/zenodo.7499424)
- Modular sample holder (10.5281/zenodo.7499416)
- Capillary flow-cell for liquid samples (10.5281/zenodo.7499421)
Introduction to SAXS
(2020)