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TeaABC from the moderate halophilic bacterium Halomonas elongata belongs to the tripartite ATP-independent periplasmic transporters (TRAP-T), a family of secondary transporters functioning in conjunction with periplasmic substrate binding proteins. TeaABC facilitates the uptake of the compatible solutes ectoine and hydroxyectoine that are accumulated in the cytoplasm under hyperosmotic stress to protect the cell from dehydration. TeaABC is the only known TRAP-T activated by osmotic stress. Currently, our knowledge on the osmoregulated compatible solute transporter is limited to ABC transporters or conventional secondary transporters. Therefore, this study presents the first detailed analysis of the molecular mechanisms underlying substrate recognition of the substrate binding protein of an osmoregulated TRAP-T. In the present study we were able to demonstrate by isothermal titration calorimetry measurements that TeaA is a high-affinity ectoine binding protein (Kd = 0.19 μM) that also has a significant but somewhat lower affinity to hydroxyectoine (Kd = 3.8 μM). Furthermore, we present the structure of TeaA in complex with ectoine at a resolution of 1.55 Å and hydroxyectoine at a resolution of 1.80 Å. Analysis of the TeaA binding pocket and comparison of its structure to other compatible solute binding proteins from ABC transporters reveal common principles in compatible solute binding but also significant differences like the solvent-mediated specific binding of ectoine to TeaA.
Nickel nanoparticles are an active research area due to their multiple applications as catalysts in different processes. A variety of preparation techniques have been reported for the synthesis of these nanoparticles, including solvothermal, microwave-assisted, and emulsion techniques. The well-studied solvothermal oleylamine synthesis route comes with the drawback of needing standard air-free techniques and often space-consuming glassware. Here, we present a facile and straightforward synthesis method for size-controlled highly monodisperse nickel nanoparticles avoiding the use of, e.g., Schlenk techniques and space-consuming labware. The nanoparticles produced by this novel synthetic route were investigated using small-angle X-ray scattering, transmission electron microscopy, X-ray diffraction, and X-ray spectroscopy. The nanoparticles were in a size range of 4–16 nm, show high sphericity, no oxidation, and no agglomeration after synthesis.
We report on the characterization of the solution structure of poly(N-vinyl-2-pyrrolidone)s (PVP) by small-angle X-ray scattering (SAXS) and by online coupling of asymmetrical flow field-flow fractionation (A4F), SAXS and dynamic light scattering (DLS). The commercial products PVP K30 and PVP K90 with nominal molar masses of 40 × 103 and 360 × 103 g mol-1, respectively, were investigated separately and as binary mixture. Detailed information for all polymer fractions is available on the polymer contour lengths and the diffusion coefficients. Key areas of applications for the A4F-SAXS-DLS coupling are seen in comparison to static light scattering for polymers with radii of gyration smaller than 10 nm, for which only SAXS produces precise analytical results on the size of the polymers in solution.
Hyperbranched poly(ethylene imine)s (PEIs) functionalized with maltose, maltotriose, and maltoheptaose form distinct core-shell globular nanoparticles as revealed by small-angle X-ray scattering (SAXS). The solution structures are quantified using the Beaucage unified exponential/power-law approach. SAXS results were confirmed with dynamic light scattering (DLS). We found that all PEI structures are completely insensitive to changes of temperature (5 °C < T < 80 °C) and pH (1 < pH < 10). This remarkable stability of a compact spherical polymeric structure makes the modified PEIs promising for a wide range of biomedical applications.
Increased use of nanomaterials in everyday products leads to their environmental release and therefore, the information need on their fate and behaviour. Nanomaterials have to be suspended with high repeatability and comparability for studies on environmental effects. They also have to be well characterised with a focus on the state of agglomeration and particle size distribution. Dynamic light-scattering (DLS) is a common technique used for these measurements. If suspensions are prepared in different laboratories, then concern has risen about the comparability of the measured results, especially when different DLS instruments are used. Therefore, for quality assurance, a round-robin test was conducted to assess the comparability of different DLS instruments and a dispersion protocol in ten independent laboratories. Polystyrene and TiO2 were chosen as test (nano)materials. For the comparability of the DLS instruments, the average sizes of the PSL and a stabilised TiO2 suspension were measured. The measured average hydrodynamic diameter shows an overall good inter-laboratory comparability. For the PSL suspension, an average hydrodynamic diameter of 201 ± 13 nm and for the TiO2 suspension an average diameter of 224 ± 24 nm were detected. For the TiO2 suspension that was prepared at each laboratory following an established suspension preparation protocol, an average hydrodynamic diameter of 211 ± 11 nm was detected. The measured average particle size (mode) increased up to 284 nm with a high standard deviation of 119 nm if the preparation protocol could not established and different procedures or different equipment were employed. This study shows that no significant differences between the employed DLS instrument types were determined. It was also shown that comparable measurements and suspension preparation could be achieved if well-defined suspension preparation protocols and comparable equipment can be used.
The self-organization of random copolymers composed of a nucleobase monomer (either 1-(4-vinylbenzyl)thymine or 9-(4-vinylbenzyl)adenine) and dodecyl methacrylate (DMA) was studied in dilute chloroform solutions. The balance between the molar fractions of the nucleobase monomer (leading to intermolecular H-bonding) and DMA (soluble moiety in chloroform) in the polymer chains was found to be the parameter that principally influences the self-organization. DMA-rich copolymers are molecularly soluble in chloroform, whereas nucleobase-rich copolymers are insoluble in this solvent. Copolymers possessing an equimolar comonomer composition self-assemble into micrometer-sized particles physically cross-linked by intermolecular H-bonds (either thymine-thymine or adenine-adenine interactions, depending on the studied copolymer). Nevertheless, when mixed together, thymine- and adenine-based colloids fuse into thermodynamically stable microspheres cross linked by adenine-thymine interactions.
We report on a hyphenated polymer analysis method consisting of asymmetrical flow field-flow fractionation (A4F) coupled online with small-angle X-ray scattering (SAXS) and dynamic light scattering (DLS). A mixture of six poly(styrene sulfonate)s with molar masses in the range of 6.5 × 103 to 1.0 × 106 g mol-1 was used as a model system for polyelectrolytes in aqueous solutions with a broad molar mass distribution. A complete polymer separation and analysis was performed in 60 min. Detailed information for all polymer fractions are available on i) the radii of gyration, which were determined from the SAXS data interpretation in terms of the Debye model (Gaussian chains), and ii) the diffusion coefficients (from DLS). We recommend using the A4F-SAXS-DLS coupling as a possible new reference method for the detailed analysis of complex polymer mixtures. Advantages of the use of SAXS are seen in comparison to static light scattering for polymers with radii of gyration smaller then 15 nm, for which only SAXS produces precise analytical results on the size of the polymers in solution.
Polyelectrolytes such as PAA and its salts are widely used, but are notoriously difficult to characterize due to their polyelectrolyte properties and broad molecular mass distributions. In this paper, we report on a new PAA analysis by combining asymmetrical flow field-flow fractionation and an advanced SAXS technique using an acoustic levitator to minimize background scattering. The proof-of-principle is demonstrated with a mixture of three standard PAAs with different molecular masses. Detailed information on the PAA fractions is available on radii of gyration, polymer contour lengths, and coil conformation. Our method is expected to be applicable for a wide range of water-soluble synthetic and natural polymers and ideal for molecular masses of 5 × 103–2 × 105 g · mol-1.
Processing nanoparticles with A4F-SAXS for toxicological studies: Iron oxide in cell-based assays
(2011)
Nanoparticles are not typically ready-to-use for in vitro cell culture assays. Prior to their use in assays, powder samples containing nanoparticles must be dispersed, de-agglomerated, fractionated by size, and characterized with respect to size and size distribution. For this purpose we report exemplarily on polyphosphate-stabilized iron oxide nanoparticles in aqueous suspension. Fractionation and online particle size analysis was performed in a time-saving procedure lasting 50 min by combining asymmetrical flow field-flow fractionation (A4F) and small-angle X-ray scattering (SAXS). Narrowly distributed nanoparticle fractions with radii of gyration (Rg) from 7 to 21 nm were obtained from polydisperse samples. The A4F-SAXS combination is introduced for the preparation of well-characterized sample fractions originating from a highly polydisperse system as typically found in engineered nanoparticles. A4F-SAXS processed particles are ready-to-use for toxicological studies. The results of preliminary tests of the effects of fractionated iron oxide nanoparticles with a Rg of 15 nm on a human colon model cell line are reported.