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Fluorescent molecularly imprinted polymers (MIPs) for sensing of phosphorylated protein epitopes
(2019)
Early detection of cancer is instrumental for successful therapeutic outcomes, but it is presently a considerable challenge. Biopsy of potentially cancerous tissues is the gold standard in medicine for the diagnosis and prognosis of this disease; however, it may not be possible in many cases due to tumour position or other complications. Liquid biopsy-based detection of specific cancer markers in biological fluids can be easily performed via immunoanalytical techniques. However, antibody-based methods suffer from high cost of tumour specific antibodies due to difficult and lengthy production. Furthermore, antibodies may have limited specificity to the target molecule, and limited lifetimes. The so-called “plastic antibodies” as MIPs can be a more affordable, reliable and stable alternative to antibodies, especially for cancer diagnostics.
Our goal is to create MIP particles to selectively bind cancer biomarkers and rapidly display a fluorescence change upon interaction with molecules of interest. Epitopes containing the phosphorylated tyrosine (pY) motif such as tripeptide YpYG and tetrapeptide pYEEI were selected as target analytes. Cancers may disrupt tyrosine phosphorylation processes regulated by human tyrosine kinases such as ZAP-70 and subsequently lead to a pronounced increase in pY residues on proteins. To ensure fast diffusion of analyte and rapid response core/shell silica micro- and nanoparticles with a thin polymer shell was chosen as the format for MIP synthesis. Fluorescent probe monomers consisting of fluorophore and recognition units are directly integrated in the polymer shell to obtain fluorescence response upon analyte binding.
We have synthesized the fluorescent MIP particles based on the previously published report for the novel phosphorylated targets with a high imprinting factor and high degree of discrimination between target analyte and non-phosphorylated and smaller competitors. The synthesized particles may be used in microfluidic devices for the rapid diagnostics of cancer.
Fluorescent molecularly imprinted polymers (MIPs) for sensing of phosphorylated protein epitopes
(2019)
Early detection of cancer is instrumental for successful therapeutic outcomes, but it is presently a considerable challenge. Biopsy of potentially cancerous tissues is the gold standard in medicine for the diagnosis and prognosis of this disease; however, it may not be possible in many cases due to tumour position or other complications. Liquid biopsy-based detection of specific cancer markers in biological fluids can be easily performed via immunoanalytical techniques. However, antibody-based methods suffer from high cost of tumour specific antibodies due to difficult and lengthy production. Furthermore, antibodies may have limited specificity to the target molecule, and limited lifetimes. The so-called “plastic antibodies” as MIPs can be a more affordable, reliable and stable alternative to antibodies, especially for cancer diagnostics.
Our goal is to create MIP particles to selectively bind cancer biomarkers and rapidly display a fluorescence change upon interaction with molecules of interest. Epitopes containing the phosphorylated tyrosine (pY) motif such as tripeptide YpYG and tetrapeptide pYEEI were selected as target analytes. Cancers may disrupt tyrosine phosphorylation processes regulated by human tyrosine kinases such as ZAP-70 and subsequently lead to a pronounced increase in pY residues on proteins. To ensure fast diffusion of analyte and rapid response core/shell silica micro- and nanoparticles with a thin polymer shell was chosen as the format for MIP synthesis. Fluorescent probe monomers consisting of fluorophore and recognition units are directly integrated in the polymer shell to obtain fluorescence response upon analyte binding.
We have synthesized the fluorescent MIP particles based on the previously published report [W. Wan et al., Chem. Eur. J., 2017, 23, 15974-1598] for the novel phosphorylated targets with a high imprinting factor and high degree of discrimination between target analyte and non-phosphorylated and smaller competitors. The synthesized particles may be used in microfluidic devices for the rapid diagnostics of cancer.
Um in einem veränderten Umfeld erfolgreich bestehen zu können, müssen Chemieunternehmen neue Pfade beschreiten. Dazu gehört insbesondere das Potential digitaler Technologien. Mit flexiblen, modularen chemischen Vielzweck-Produktionsanlagen lassen sich häufig wechselnde Produkte mit kürzeren Vorlauf- und Stillstandzeiten zwischen den Kampagnen und dennoch hoher Qualität realisieren. Intensivierte, kontinuierliche Produktionsanlagen erlauben auch den Umgang mit schwierig zu handhabenden Substanzen.
Grundvoraussetzung für solche Konzepte ist eine hochautomatisierte "chemische" Prozesskontrolle zusammen mit Echtzeit-Qualitätskotrolle, die "chemische" Informationen über den Prozess bereitstellt. In einem Anwendungsbeispiel wurde eine pharmazeutische Lithiierungsreaktion aus einer modularen Pilot-Anlage betrachtet und dabei die Vorzüge eines vollautomatischen NMR-Sensors untersucht. Dazu wurde ein kommerziell erhältliches Benchtop-NMR-Spektrometer mit Permanentmagnet auf die industriellen Anforderungen, wie Explosionsschutz, Feldkommunikation und vollautomatischer, robuster Datenauswertung angepasst. Der NMR-Sensor konnte schließlich erfolgreich im vollautomatischen Betrieb nach fortschrittlichen Regelkonzepten und für die Echtzeitoptimierung der Anlage getestet werden. Die NMR-Spektroskopie erwies sich als hervorragende Online-Methode und konnte zusammen mit einer modularen Datenauswertung sehr flexibel genutzt werden. Die Methode konnte überdies als zuverlässige Referenzmethode zur Kalibrierung konventioneller Online-Analytik eingesetzt werden.
Zukünftig werden voll integrierte und intelligent vernetzte "smarte" Sensoren und Prozesse eine kontinuierliche Produktion von Chemikalien und Pharmazeutika mit vertretbaren Qualitätskosten möglich machen.
In many scientific fields, isotopic analysis can offer valuable information, e.g., for tracing the origin of food products, environmental contaminants, forensic and archaeological samples (provenance determination), for age determination of minerals (geochronological dating) or for elucidating chemical processes. Up to date, typically bulk analysis is aimed at measuring the isotopic composition of the entire elemental content of the sample. However, the analyte element is usually present under the form of different species. Thus, separating species of interest from one another and from matrix components prior to isotope ratio measurements can provide species-specific isotopic information, which could be used for tracing the origin of environmental pollutants and elucidation of (environmental) speciation. Using on-line hyphenations of separation techniques with multicollector-ICP-MS (MC-ICP-MS) can save time and effort and enables the analysis of different species during a single measurement.
In this work, we developed an on-line hyphenation of CE with multicollector-ICP-MS (CE/MC-ICP-MS) for isotopic analysis of sulfur species. With this method, the isotopic composition of sulfur in sulfate originating from river water could be analyzed without sample preparation. The results were compared with data from off-line analysis of the same samples to ensure accuracy. The precision of the results of the on-line measurements was high enough to distinguish the rivers from one another by the isotopic signature of the river water sulfate. Next to environmental applications, a future field could be species-specific isotopic analysis of biomolecules, as sulfur is the only covalently bound constituent of proteins which can be analyzed by MC-ICP-MS.
Multi-collector inductively coupled plasma-mass spectrometry (MC-ICP-MS) has evolved significantly since its introduction in 1992. The second and third generation instruments now allow isotope ratio measurements at unprecedented precisions, 0.001 % or better. However, precision alone is not enough for producing accurate and reliable isotope ratio measurements. Metrological considerations such as the selection of suitable calibration strategies, proper assessment of instrumental biases, and the estimation of overall measurement uncertainty remain critical to the measurement process. Properly assessed, measurement uncertainty then provides the interval within which a result can be considered both accurate and precise.
All mass spectrometric measurements are affected by instrumental mass discrimination and produce isotope ratios that are biased relative to their “true” ratio. To produce accurate and traceable isotope ratio measurements, it is imperative that certified isotope reference materials (iCRMs) be used for calibration and validation purposes. iCRMs reporting absolute isotope ratios are an analyst’s first choice, particularly when its uncertainty is sufficient for the intended use. However, when smaller uncertainties are required to resolve subtle differences between samples, delta-scale measurements become important. Here, the difference between an isotope ratio measured in a sample and in an internationally accepted isotope reference material (iRM) is determined. This deviation can be positive or negative relative to the iRM, is called a delta value, and is often expressed in per mil units.
This presentation will highlight the potential for MC-ICP-MS to produce isotope ratio measurements with minimal uncertainties by examining three applications involving Mg isotopes: 1) the certification of a set of iCRMs for their absolute isotope ratio using a gravimetric isotope mixture approach; 2) the comparison of these iCRMs with currently accepted Mg delta-scale reference materials through intercalibration, and 3) the determination of isotope fractionation exponents for geochemical applications.
Background. Aflatoxin B1 (AFB1) is a toxic low-molecular-weight secondary fungal metabolite produced mainly by Aspergillus flavus and Aspergillus parasiticus not only at pre-harvest time but also at post-harvest stages including storage. AFB1 was classified as a Group I carcinogen by the World Health Organization for Research on Cancer in 1993. AFB1 is able to naturally contaminate medicinal plants and therefore causing serious health issues for humans consuming the related medicine. This study aimed to develop an efficient fluorescence polarization immunoassay (FPIA) and for the first time a rapid (5-10 min), low-cost, and simple membrane-based flow-through immunoassay (MBA) for determination of AFB1 in medical herbs based on a monoclonal antibody.
Methods. Two different techniques for AFB1detection in medical herbs (Herba Orígani vulgáris, Folia Urticae, Fructus Rubi idaei) were developed and compared, namely an easy-to-use semi-quantitative flow-through membrane-based enzyme immunoassay (MBA), and a homogeneous method which needs no separation or washing steps (assay time 10 min), a quantitative fluorescence polarization immunoassay (FPIA).
Results. A cut-off level of the developed MBA can vary wide from 0.8 ppb to 1 ppb. The FPIA method showed a linear working range of 8.6 ppb to 64 ppb, IC50 of FPIA is 24 ppb. The results were in good correlation with the ELISA results (IC50 = 0.1 ppb). LC–MS/MS was used to confirm the results, too.
Conclusion. MBA can be used for a quick on-site AFB1 detection in medical herbs (Herba Orígani vulgáris (Oríganum vulgáre), Folia Urticae (Urtíca dióica), Fructus Rubi idaei (Rúbus idáeus)), the developed test does not require special equipment and is not time-consuming (5-10min), includes several simple steps and can be performed directly on-site. The major advantages of the developed FPIA are its simplicity and suitability for a rapid screening of a large number of samples.
Is it a parmesan cheese from Italy? Who painted the Mona Lisa? The determination of the place of origin is essential for consumer protection, detection of falsifications, and also to bring justice.
All the tangible possess an isotopic fingerprint. However, current technologies are too expensive. We work on the development of fast and low-cost optical instruments and methods for isotope analysis.
Simultaneous multielemental analysis of crude oils by high-resolutions absorption spectrometry
(2019)
When crude oil arrives at a refinery it needs a lot of processing before it is suitable for cracking into lighter fractions. Sulfur has to be extracted to meet ultra-low sulfur legislation for most of the fuel grades, and desalination is a crucial process as chlorine within salts is corrosive to refinery equipment. Measuring the amounts of sulfur and chlorine within crude oil is the first step in a complex clean-up process.
Heavy metals, such as vanadium, nickel and iron need to be removed too. These metals can poison the catalyst used to crack the oil into lighter fractions. This is costly as it reduces the useful life of the catalyst. Like chlorine, heavy metals also have a corrosive effect on the plant. There is some evidence that the presence of some metals in the final product can reduce performance.
A fast determination of elements and size of suspended particles is vital for diagnosis and safeguard of refinery equipment. However, sample preparation for current analytical methods consumes precious time and lost particle size information.
High-resolution continuum source graphite furnace absorption spectrometry (HR-CS-GFAS) is proposed as a fast analytical method for elemental determination in crude oils and potentially for simultaneous multielement and particle size analysis. This HR-CS-GFAS instrumentation is coupled to a modular simultaneous echelle spectrometer (MOSES) and provides a full optical window with high resolution (from 180 to 900 nm with bandwidth λ/170,000). By using this set-up, it is possible to generate a multiparameter 3D spectral image (atomic and molecular lines, isotopic shift, atomization delay, and intensities). The generated spectral images can be analyzed by multivariate regressions for the elemental and particle size analysis. Additionally, if several atomic and molecular lines are simultaneously measured, they may be used in multi-energy calibration (MEC), a method based on the use of many wavelengths of the same absorbing/emitting entity to improve the accuracy in analytical atomic spectrometry. This MEC approach combined with multivariate image analysis allows the quantification of selected elements (Si, Al, Ni, Fe, V, S, and Cl) and overcomes matrix effects.
Society for Applied Spectroscopy (SAS) Atomic Section Student Award.
Magnesium is a major element in the hydrosphere and biosphere and plays important roles in (bio-) geochemical and physiological cycles. Mg has three stable isotopes, 24Mg, 25Mg and 26Mg. It is due to their relatively large mass difference (~8% between) that isotope fractionation leads to slight variations of isotope amount ratios in biological, environmental and geological samples. Traditionally, isotope ratios are measured by mass spectrometric methods. Their drawbacks include the high costs for instruments and their operation, experienced operators and elaborate time-consuming chromatographic sample preparation.
Recently, optical spectrometric methods have been proposed as faster and low-cost alternative for the analysis of isotope ratios of selected elements by means of high-resolution continuum source molecular absorption spectrometry (HR-CS-MAS), and laser ablation molecular isotopic spectrometry (LAMIS).
For the determination of Mg isotope ratios in selected rock reference materials, the molecular spectrum of the in-situ generated MgF and MgO molecules were studied and their results compared with MC-ICP-MS. By HR-CS-MAS, samples were dissolved by acid digestion and Mg isotopes analyzed with and without matrix. The absorption spectrum was recorded for MgF for the electronic transitions X 2Σ → A 2 Πi, and X 2Σ → B 2Σ+. In the case of LAMIS, we investigated the MgF molecule for the electronic transition A 2Πi → X 2Σ, as well as direct analysis by the MgO molecule for the electronic transition A 1Π+ → X 1Σ. The MgF and MgO spectra are described as the linear combination of their isotopic components or isotopologues: 24MgF, 25MgF, and 26MgF for the MgF and 24MgO, 25MgO, and 26MgO for the MgO. The isotope analysis was done by deconvolution of the MgF spectrum by partial least square regression (PLS) calibrated with enriched isotope spikes. Results were accurate with precisions ranging between 0.2 ‰ and 0.8 ‰ (2 SD, n= 10) for HR-CS-GFMAS. No statistically significant differences were observed for samples w/o matrix extraction. On the other hand, LAMIS allows the direct analysis of solid samples with the extended possibility of direct analysis, however the precision is lower due the lack of solid isotopic calibration standards.
Is it a parmesan cheese from Italy? Who painted the Mona Lisa? The determination of the place of origin is essential for consumer protection, detection of falsifications, and also to bring justice.
All the tangible possess an isotopic fingerprint. However, current technologies are too expensive. We work on the development of fast and low-cost optical instruments and methods for isotope analysis.