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Evaluation of tools for describing, reproducing and reusing scientific workflows

  • In the field of computational science and engineering, workflows often entail the application of various software, for instance, for simulation or pre- and postprocessing. Typically, these components have to be combined in arbitrarily complex workflows to address a specific research question. In order for peer researchers to understand, reproduce and (re)use the findings of a scientific publication, several challenges have to be addressed. For instance, the employed workflow has to be automated and information on all used software must be available for a reproduction of the results. Moreover, the results must be traceable and the workflow documented and readable to allow for external verification and greater trust. In this paper, existing workflow management systems (WfMSs) are discussed regarding their suitability for describing, reproducing and reusing scientific workflows. To this end, a set of general requirements for WfMSswere deduced from user stories that we deem relevant in theIn the field of computational science and engineering, workflows often entail the application of various software, for instance, for simulation or pre- and postprocessing. Typically, these components have to be combined in arbitrarily complex workflows to address a specific research question. In order for peer researchers to understand, reproduce and (re)use the findings of a scientific publication, several challenges have to be addressed. For instance, the employed workflow has to be automated and information on all used software must be available for a reproduction of the results. Moreover, the results must be traceable and the workflow documented and readable to allow for external verification and greater trust. In this paper, existing workflow management systems (WfMSs) are discussed regarding their suitability for describing, reproducing and reusing scientific workflows. To this end, a set of general requirements for WfMSswere deduced from user stories that we deem relevant in the domain of computational science and engineering. On the basis of an exemplary workflow implementation, publicly hosted at GitHub (https:// this http URL), a selection of different WfMSs is compared with respect to these requirements, to support fellow scientists in identifying the WfMSs that best suit their requirements.zeige mehrzeige weniger

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Metadaten
Autor*innen:Philipp Diercks, D. Gläser, O. Lünsdorf, M. Selzer, B. Flemisch, Jörg F. Unger
Dokumenttyp:Forschungsdatensatz
Veröffentlichungsform:Graue Literatur
Sprache:Englisch
Jahr der Erstveröffentlichung:2024
Organisationseinheit der BAM:7 Bauwerkssicherheit
7 Bauwerkssicherheit / 7.7 Modellierung und Simulation
Herausgeber (Institution):Bundesanstalt für Materialforschung und -prüfung (BAM)
Verlag:Arxiv; Cornell Tech
Verlagsort:New York, NY
DDC-Klassifikation:Technik, Medizin, angewandte Wissenschaften / Ingenieurwissenschaften / Ingenieurwissenschaften und zugeordnete Tätigkeiten
Technik, Medizin, angewandte Wissenschaften / Ingenieurwissenschaften / Ingenieurbau
Freie Schlagwörter:FAIR; Reproducibility, scientific workflow; Tool comparison; Workflow management
Themenfelder/Aktivitätsfelder der BAM:Infrastruktur
Infrastruktur / Verkehrsinfrastrukturen
Material
Material / Materialdesign
Ort der Datenerhebung:Berlin, Germany
Beginndatum der Datenerstellung:10.11.2022
DOI:10.48550/arXiv.2211.06429
URL:https://arxiv.org/abs/2211.06429
Beschreibung der Datei(en) :Workflow Tools Paper https://arxiv.org/abs/2211.06429
Verfügbarkeit des Dokuments:Datei für die Öffentlichkeit verfügbar ("Open Access")
Lizenz (Deutsch):License LogoCreative Commons - CC BY - Namensnennung 4.0 International
Datum der Freischaltung:11.04.2024
Referierte Publikation:Nein
Schriftenreihen ohne Nummerierung:Forschungsdatensätze der BAM
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