TY - CONF A1 - Pietsch, Franziska T1 - Selection of resistance in bacterial biofilms grown on antimicrobial surfaces in a multidrug environment N2 - Introduction: Biofilms are regarded as a common cause of chronic infections on medical devices. Preventive and therapeutic strategies against biofilm infections commonly involve applications of multiple antimicrobial substances: antimicrobial coatings on the implanted biomaterials in combination with systemically administered antibiotics. While this practice of combination therapy harbours the risk of developing cross-resistance, it might also provide the possibility to implement specific antimicrobial-antibiotic combinations (AACs) that can slow down the selection of antibiotic resistant strains. Hypothesis and aims: Specific AACs can exert combinatorial effects on the growth of susceptible and antibiotic-resistant Pseudomonas aeruginosa that either suppress or increase their individual effects. Our aim is to identify AACs with antagonistic or synergistic effects on pseudomonal biofilms and to understand their impact on selection of resistant strains. Specifically, we want to identify AACs that select for and against antibiotic resistance during biofilm formation. Methodology: We screened for AACs that cause antagonistic or synergistic effects on planktonic P. aeruginosa. To study the effect of antimicrobial-antibiotic exposure on resistance selection in bacterial biofilms, we will grow resistant and sensitive strains on PDMS surfaces with and without antimicrobial coatings and expose them to antibiotics. Results: Several combinations with synergistic or antagonistic interaction on the growth rate of P. aeruginosa were detected. We observed a strong antagonism when combining the antimicrobial substance chlorhexidine with the carbapenem drug meropenem. A meropenem-resistant mutant showed a selection advantage in low concentrations of chlorhexidine combined with a sub-inhibitory concentration of meropenem over the wild-type. No antagonistic effect was observed for the same combination when E. coli was exposed to chlorhexidine and meropenem, suggesting a non-chemical basis for the observed effect on P. aeruginosa. Conclusion: Gaining a better understanding about resistance selection during biofilm formation on biomedical surfaces will enable us to mitigate against biofilm-associated antimicrobial resistance. T2 - Eurobiofilms 2019 CY - Glasgow, UK DA - 03.09.2019 KW - Resistance KW - Antibiotics KW - Pseudomonas PY - 2019 AN - OPUS4-49168 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Ecke, Alexander T1 - Development of an ELISA for the determination of amoxicillin in water samples N2 - We report the first results for the immunochemical determination of the β-lactam antibiotic drug amoxicillin (AMX) in water samples by ELISA (enzyme-linked immunosorbent assay). The applied indirect competitive ELISA using a commercially available mouse anti-AMX antibody enables testing for AMX with a limit of detection of around 1 µg/L. Calibration curves of calibrators prepared in different water samples showed equal shape. This underlines the suitability of this assay for the AMX determination in these samples. Furthermore, cross-reactivities of structurally similar β-lactam antibiotics were examined and found to be low for ampicillin, penicillin G and penicillin V. In contrast, carbenicillin was recognized by the antibody even better than AMX indicating a positive effect of an additional carboxyl group on antibody binding. This is promising for further application of this assay, e.g. in the determination of the most relevant hydrolysis product of AMX, amoxicilloic acid. T2 - Berliner Chemie Symposium CY - Berlin, Germany DA - 26.09.2019 KW - Amoxicillin KW - Immunoassay KW - Water Analysis KW - Antibiotics PY - 2019 AN - OPUS4-49178 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Neumann, Patrick P. T1 - Influence of rotor downwash on vertically displaced nanobots in flight N2 - Using a swarm of copter-based gas-sensitive aerial nano robots for monitoring indoor air quality is challenging due to, e.g., limited air space in buildings. To avoid an over-regulation of the available indoor air space (e.g., prohibit copters to fly above each other), a safety region around each copter must be defined to guarantee a safe operation of the swarm. The key contributions of this poster are the realization of experiments that investigate the influence of the rotor downwash on flying vertically displaced nano robots and the development of a model describing the above-mentioned safety region. T2 - 36th Danubia-Adria Symposium on Advances in Experimental Mechanics CY - Pilsen, Czech Republic DA - 24.09.2019 KW - Gas sensing KW - Mobile Robot Olfaction KW - Nano aerial robot KW - Swarm PY - 2019 AN - OPUS4-49175 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - von Törne, Wipert Jannik T1 - GC-MS and GC-MS/MS Based Determination of Transformation Products and Major Phase I Metabolites of Warfarin N2 - Herein, we present the development of a gas chromatographic method for Determination of warfarin, its TPs, and selected metabolites. TPs were formed by applying UV-irradiation, ozonation, and an electrochemical cell coupled to mass spectrometry to mimic the oxidative phase I metabolism. The further aim is to use this method for detection and quantification under environmentally relevant conditions, as well as, toxicological assessment. T2 - SETAC GLB CY - Landau, Germany DA - 04.09.2019 KW - Warfarin KW - GC-MS KW - GC-MS/MS PY - 2019 AN - OPUS4-49307 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Radnik, Jörg T1 - Combining surface analytic and toxicity data for safer nanomaterials N2 - Nanomaterials are present in our everyday life. Paint coats, sunscreens, catalysts and additives for tyres are good examples for the use of such materials in mass-market products. The problem of the safety of nanomaterials is recognized as a problem for health and environment, which lead to the special registration of nanomaterials according to an annex of REACH as of 2020. But a great problem for the risk assessment of nanomaterials that several factors could influence the hazardous nature of them. Additional to composition, crystal structure, size and shape the surface properties of such particles belong to these parameters for risk assesment. The reason for the relevance of the surface is obvious: the smaller the particle, the higher is the share of the surface. Additionally, the surface is the region of the particle which interacts with the surrounding which is another crucial factor for the understanding the effect of a nanomaterial on health and environment. In the OECD Testing Programme on Manufactured Nanomaterials exists consequently an Endpoint 4.30 Surface Chemistry in Chapter 4. PHYSICAL AND CHEMICAL PROPERTIES. In summary, there is obviously a need for a correlation between surface chemical analytic data and toxicity. To fill in this gap, we present surface analytic results obtained with X-ray photoelectron spectroscopy and Time-of-Flight Secondary Ion Mass Spectrometry and correlate them with cytotoxic data gain by high-throughput screening experiments. It must be noted, that these experiments were done at the same set of titania materials taken from the JRC (Joint Research Centre of the European Union) Nanomaterials Repository. As material TiO2 was chosen due to its widespread use in consumer products, e.g. paint coats and sunscreens. With this new approach a better understanding of the influence of surface properties on the toxicity can be expected leading to a better risk assessment of these materials. T2 - ECASIA 2019 CY - Dresden, Germany DA - 15.09.2019 KW - Risk assessment KW - Nanomaterials KW - Surface analytic KW - Toxicology PY - 2019 AN - OPUS4-49090 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Eisentraut, Paul T1 - Understanding degradation mechanisms of microplastics in environmental samples N2 - Im Vortrag wird die Problematik Mikroplastik eingeführt und ein Probenset aus dem Mittelmeer mit ersten Ergebnissen besprochen. Die Alterung von Polymeren im Umweltkontext sowie Möglichkeiten der Analyse von Polymeralterungsfortschritten werden diskutiert. Die thermoanalytische Methode mit Zersetzungsgasanalytik (TED-GC-MS) wird eingeführt und deren Einsatzmöglichkeiten in der Thematik umrissen. T2 - EuroMech Colloquium 607 Marine Aging of Polymers CY - Brest, France DA - 28.08.2019 KW - Microplastics KW - Tara Mediterranee KW - Polymer aging KW - TED-GC-MS PY - 2019 AN - OPUS4-49110 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Kratz, S. T1 - Development of a standard substrate to facilitate the use of DGT for the assessment of P recycling fertilizers N2 - P recycling fertilizers are gaining increasing importance in our efforts to close nutrient cycles. An unsatisfactory performance of standard chemical extraction methods to assess the fertilizing effects of such products was reported. They demonstrated that DGT extractions of incubated soil/fertilizer mixtures were able to predict the fertilizing effects of the respective products more accurately. Since DGT works with soil/fertilizer mixtures, its interpretation is soil-dependent. Therefore, in order to facilitate its use as a tool to predict fertilizer performance, it needs to be standardized based on a standard substrate. This research aims to develop a standard substrate based on which evaluation categories for the DGT fertilizer extraction can be derived. The substrate composition should allow to vary the most important soil properties determining the plant availability of fertilizer P. It must also be reproducible at any time and any place. Substrate variants with varying proportions of quartz sand, a clay mineral and sphagnum peat were prepared and set to pH-levels 5.5 and 7 by addition of CaCO3. 7 variants were incubated with a set of test fertilizers (2 recycling fertilizers based on sewage sludge ash and 2 conventional mineral fertilizers) for 2 weeks. Substrate/fertilizer mixtures were then extracted with DGT and an ANOVA was performed to test if the DGT extraction was able to depict significant differences between fertilizers and substrate variants. An 8-week pot trial with ryegrass (3 cuts) was set up with the same substrate variants and test fertilizers. P uptake was determined to assess the fertilizing effect and correlated with the results of the DGT extractions. Statistically significant differences were found between DGT results for the various test fertilizers and substrate variants, indicating that DGT is able to differentiate between P solubility of fertilizers in relation to substrate quality. DGT results showed a strong relationship with P uptake, confirming that this method is suitable to predict the fertilizing effect of P fertilizers. Further optimization of substrate composition and tests with a wider variety of crops and fertilizer types are needed, before evaluation categories for DGT values can be derived. T2 - 6th Conference on Diffusive Gradients in Thin Films CY - Vienna, Austria DA - 17.09.2019 KW - Fertilzer KW - Phosphorus KW - Diffusive Gradients in thin films (DGT) PY - 2019 AN - OPUS4-49060 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schreiber, Frank T1 - Single-cell trait-based biodiversity in microbial communities and its link to ecosystem functioning in a stratified lake N2 - A fundamental question in ecology is how biodiversity affects ecosystem function. Biodiversity is commonly estimated based on genetic variation. We investigated a new approach that defines and measures biodiversity in complex microbial communities. We used the variation in multiple functionally-relevant, phenotypic traits measured in parallel in single cells as a metric for microbial phenotypic diversity. We studied phenotypic diversity and ecosystem functioning throughout different photosynthetic layers dominated by divergent microbial communities in the gradient of Lago di Cadagno. We determined genetic diversity by 16S and 18S amplicon sequencing and bulk ecosystem functioning (photosynthesis). In addition, we determined phenotypic diversity using single-cell technologies such as nanometer-scale secondary ion mass spectrometry (NanoSIMS) correlated with confocal laser scanning microscopy (CLSM) and scanning flow-cytometry. We measured functional trait variation between individuals in 13CO2 fixation, 15NH4+ uptake, and variation in physio-morphological cell traits, such as cell size, shape, and auto-fluorescence for various pigments related to photosynthesis. We used the distances between individuals in a multidimensional trait space to derive phenotypic trait-based diversity indices, such as trait richness, trait evenness, and trait divergence. We find that phenotypic trait divergence associates with ecosystem functioning, whereas genetic diversity does not. Including activity-based, single-cell phenotypic measurements with NanoSIMS provided an additional accuracy to the trait-based diversity assessment and allowed us to formulate hypotheses on the mechanisms that shape the correlation between phenotypic diversity and eco-system function. Together, our results show that phenotypic diversity is a meaningful concept to measure microbial biodiversity and associate it with ecosystem functioning. T2 - 8th Congress of European Microbiologists - FEMS 2019 CY - Glasgow, UK DA - 07.11.2019 KW - NanoSIMS KW - Biodiversity PY - 2019 AN - OPUS4-49077 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schreiber, Frank T1 - Single-cell trait-based biodiversity in microbial communities and its link to ecosystem functioning in a stratified lake N2 - A fundamental question in ecology is how biodiversity affects ecosystem function. Biodiversity is commonly estimated based on genetic variation. We investigated a new approach that defines and measures biodiversity in complex microbial communities. We used the variation in multiple functionally-relevant, phenotypic traits measured in parallel in single cells as a metric for microbial phenotypic diversity. We studied phenotypic diversity and ecosystem functioning throughout different photosynthetic layers dominated by divergent microbial communities in the gradient of Lago di Cadagno. We determined genetic diversity by 16S and 18S amplicon sequencing and bulk ecosystem functioning (photosynthesis). In addition, we determined phenotypic diversity using single-cell technologies such as nanometer-scale secondary ion mass spectrometry (NanoSIMS) correlated with confocal laser scanning microscopy (CLSM) and scanning flow-cytometry. We measured functional trait variation between individuals in 13CO2 fixation, 15NH4+ uptake, and variation in physio-morphological cell traits, such as cell size, shape, and auto-fluorescence for various pigments related to photosynthesis. We used the distances between individuals in a multidimensional trait space to derive phenotypic trait-based diversity indices, such as trait richness, trait evenness, and trait divergence. We find that phenotypic trait divergence associates with ecosystem functioning, whereas genetic diversity does not. Including activity-based, single-cell phenotypic measurements with NanoSIMS provided an additional accuracy to the trait-based diversity assessment and allowed us to formulate hypotheses on the mechanisms that shape the correlation between phenotypic diversity and eco-system function. Together, our results show that phenotypic diversity is a meaningful concept to measure microbial biodiversity and associate it with ecosystem functioning. T2 - 8th Congress of European Microbiologists - FEMS 2019 CY - Glasgow, UK DA - 07.11.2019 KW - NanoSIMS KW - Biodiversity PY - 2019 AN - OPUS4-49080 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schreiber, Frank T1 - Persistence as a microbial survival strategy against biocides and its link to antibiotic resistance evolution N2 - Question: One cornerstone to prevent the spread of bacteria in clinical and industrial settings is the application of biocides including disinfectants and preservatives. However, bacteria can evolve resistance to biocides, which in turn can confer cross-resistance to antibiotics. Additionally, clonal bacterial populations can display phenotypic heterogeneity with respect to the tolerance of antibiotic stress leading to a prolonged survival of a sub-population; this phenomenon is termed persistence. Persistence to antibiotics is an evolvable trait and can serve as a stepping stone for the evolution of genetically encoded resistance. Until now, there is a lack of systematic studies that investigate if bacterial populations establish persister subpopulations that tolerate disinfectant stress longer than most of the population. Our objective is to investigate if persistence is a bacterial survival strategy against biocides. Furthermore, we investigate the mechanisms of biocide persistence and if persistence can evolve in the face of fluctuating exposure to biocides. Lastly, we test if the evolved mechanisms of biocide tolerance lead to biocide resistance and if they confer cross-tolerance and cross-resistance against antibiotics. Methods: We use time-kill assays in the presence of biocides and experimental evolution combined to whole-genome sequencing in the model organism E. coli. Results: We find persister sub-populations against chlorhexidine and quaternary ammonium compounds, but not to alcohols, aldehydes and oxidative compounds. We will present the relationship of mechanisms known to underlie antibiotic persister formation to the formation of persisters against biocides. In addition, we will present data from an ongoing evolution experiment for persistence against biocides. Conclusion There is a link between antibiotic and biocide persistence with possible implications for antibiotic resistance evolution and spread. T2 - 5th International Symposium on the Environmental Dimension of Antibiotic Resistance - EDAR 2019 CY - Hong Kong, China DA - 09.06.2019 KW - Antimicrobial resistance KW - Biocides KW - Persister cells PY - 2019 AN - OPUS4-49083 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schreiber, Frank T1 - Persistence as a microbial survival strategy against biocides and its link to antibiotic resistance evolution N2 - Background: One cornerstone to prevent the spread of antibiotic resistant bacteria in clinical settings is the application of disinfectants. However, bacteria can evolve resistance to disinfectants, which in turn can confer cross-resistance to antibiotics. Additionally, clonal bacterial populations can display phenotypic heterogeneity with respect to the tolerance of antibiotic stress leading to a prolonged survival of a sub-population; this phenomenon is termed persistence. Persistence to antibiotics is an evolvable trait and can serve as a stepping stone for the evolution of genetically encoded resistance. Until now, there is a lack of systematic studies that investigate if bacterial populations establish persister subpopulations that tolerate disinfectant stress longer than most of the population. Objectives: Our objective is to investigate if persistence is a bacterial survival strategy against disinfectants. Furthermore, we investigate the mechanisms of disinfectant persistence and if persistence can evolve in the face of fluctuating exposure to disinfectants. Lastly, we test if the evolved mechanisms of disinfectant tolerance lead to disinfectant resistance and if they confer cross-tolerance and cross-resistance against antibiotics. Methods: We use time-kill assays in the presence of disinfectants and experimental evolution combined to whole-genome sequencing in the model organism E. coli. Results: We find persister sub-populations against chlorhexidine and quaternary ammonium compounds, but not to alcohols, aldehydes and oxidative compounds. We will present the relationship of mechanisms known to underlie antibiotic persister formation to the formation of persisters against disinfectants. In addition, we will present data from an ongoing evolution experiment for persistence against disinfectants. T2 - 8th Congress of European Microbiologists - FEMS 2019 CY - Glasgow, UK DA - 07.11.2019 KW - Antimicrobial resistance KW - Biocides KW - Persister cells PY - 2019 AN - OPUS4-49081 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Trubiroha, P. A1 - Geburtig, Anja A1 - Wachtendorf, Volker T1 - 40 Years of Global-UV-Test weathering device: with fluorescent UV lamps and a precise microclimatical control into the future N2 - On the basis of a lot of investigation on the spectral sensitivity of photo degradation of plastics and on the underestimated influence of temperature and relative humidity on degradation processes a new type of weathering device was presented at the end of the seventies: It was a combination of a radiation source with fluorescent UV lamps and a precise climatic cabinet. The radiation emission from a combination of four different types of fluorescent UV lamps was superimposed on the specimen surfaces in the climatic cabinet to match the UV part of solar radiation as closely as possible. Air temperature was controlled to within ± 1 °C, and relative humidity to within ± 5 %RH. As the lamps’ emission is focussed on the UV range almost no radiation heating of the sample occurs. Therefore, the temperature of the sample, which is the quantity of consideration for the degradation, is nearly identical with the chamber’s air temperature, which is the quantity to be controlled. Also, therefore, high humidity can be obtained on the sample surface. The limitation of the emission to the UV range is sufficient for the study of the polymer matrix. This type of weathering device offers an exactness of microclimatic control of the sample’s surface, which should be a standard for weathering devices. Even now it is the only weathering device which generates pure relative humidity (without aerosol). T2 - 9th European Weathering Symposium CY - Basel, Switzerland DA - 18.09.2019 KW - Weathering KW - Irradiation PY - 2019 SN - 978-3-9818507-5-8 SP - 37 EP - 47 PB - Thomas Würtz Grafik-Design CY - Karlsruhe, Germany AN - OPUS4-49151 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schlegel, Moritz-Caspar T1 - Ecodesign spinning towards the circular Economy - The contribution of new standards on the material efficiency N2 - Whilst the concept of ecodesign is intended to account for the environmental impacts of the product across its whole lifecycle, European ecodesign policy to date has been heavily focused upon energy efficiency in the use phase. The Ecodesign Directive and Energy Labelling Regulation have achieved substantial energy savings since their inception. For many products, the magnitude of savings available from further tightening existing energy efficiency requirements is now often outweighed by savings that can be achieved by material efficiency requirements. Further, there are some products such as smartphones for which there are limited gains to be made in energy efficiency but for material efficiency. In the Commission’s Circular Economy Action Plan from 2015, a new direction was defined for ecodesign policy, to systematically examine considerations such as reparability, durability, upgradability, recyclability, or the identification of certain materials or substances. The Commission consequently issued a standardisation request (M/543, 2015) to the European Standardization Organisations (CEN / CENELEC / ETSI) to develop generic/horizontal standards relevant to energy-related products that address these major aspects of material efficiency. In this study we evaluate the potential contribution of these new standards (with specific focus on the standards for repair, durability and recyclability) to future developments under the European Ecodesign Directive. Opportunities for the impact of these standards to be enhanced by future work are highlighted. T2 - PLATE - Product Lifetimes and the Environment CY - Berlin, Germany DA - 18.09.2019 KW - Ecodesign KW - Circular economy KW - Material efficiency KW - Resource efficiency KW - Standardisation PY - 2019 AN - OPUS4-49146 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pollakowski-Herrmann, Beatrix T1 - Quantitative elemental analysis of ambient aerosol particles using portable TXRF N2 - A reliable analysis of aerosol particle is curial for enforcing EU air quality regulations to protect human health, and for research on climate change effects [1]. Although metrics such as PM10 and PM2.5 are currently in use, the level of uncertainty of aerosol metrics is too high and the traceability is insufficient. Within the AEROMET project [2] procedures are developed aiming at reducing the uncertainties of particle mass, size, and number concentration measurements including the characterization of regulated components in airborne particles. Here, we present an approach how to improve the uncertainties of the particle mass by mobile total reflection x-ray fluorescence (TXRF) analysis. The combination of TXRF and aerosols sampling techniques supported by reference-free synchrotron radiation-based XRF enables a quantitative real-time analysis of particle mass. During in-field campaigns, the procedure was tested, monitoring the size dependent mass concentrations of specific elements in ambient aerosols under dynamic conditions. This approach allows a direct time and size-resolved analysis without laborious digestion steps and a reduced risk of contamination. Aerosol particles were sampled in a 13-stage DLPI impactor on acrylic discs. TXRF analysis was performed on-site with the transportable spectrometer S2 PICOFOX (Bruker Nano GmbH). The TXRF quantification was based on internal standardization. At moderate air pollution levels (PM10 20 µg/m³) sampling times of less than 2 hours were enough to detect elements in different particle size bins. The on-site approach and the high sensitivity of TXRF enables the observation of rather quick changes in the quantity and distribution of elements in an ambient aerosol on the day of sampling. The analysis of the morning and afternoon sampling shifts reveals the occurrence of the elements Fe, Ca and Si in different size bins as well as their temporal change in respective mass concentrations over the day while the distributions of several other elements remain unchanged. T2 - 11th International Conference on “Instrumental Methods of Analysis” CY - Ioannina, Greece DA - 22.09.2019 KW - Air quality KW - Novel sample preparation techniques KW - Analytical chemistry KW - Metals PY - 2019 AN - OPUS4-49249 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hüllmann, Dino A1 - Neumann, Patrick P. A1 - Lilienthal, A. J. T1 - Gas Dispersion Fluid Mechanics Simulation for Large Outdoor Environments N2 - The development of algorithms for mapping gas distributions and localising gas sources is a challenging task, because gas dispersion is a highly dynamic process and it is impossible to capture ground truth data. Fluid-mechanical simulations are a suitable way to support the development of these algorithms. Several tools for gas dispersion simulation have been developed, but they are not suitable for simulations of large outdoor environments. In this paper, we present a concept of how an existing simulator can be extended to handle both indoor and large outdoor scenarios. T2 - 36th Danubia Adria Symposium on Advances in Experimental Mechanics CY - Pilsen, Czech Republic DA - 24.09.2019 KW - Gas dispersion simulation KW - CFD KW - Gas tomography PY - 2019 SN - 978-80-261-0876-4 SP - 49 EP - 50 CY - Pilsen, Czech Republic AN - OPUS4-49224 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Dombinov, V. T1 - Does co-combustion of bagasse and chicken manure affect the bioavailability of P from ash to soybeans? N2 - Brazilian farming industry consumed around 2.2 million tons of phosphorus (P) fertilizers in 2016. The agricultural industry depends on imported P fertilizers and over 98% of P fertilizers were used for sugarcane, soybean and maize production. An alternative is to use P from sugarcane bagasse. Bagasse is the fibrous plant material remaining after extraction of sugarcane juice, and it is combusted for energy production. Remaining ash con-tains up to 0.6 wt% P. The use of bagasse ash (BA) as P fertilizer could decrease the annual import of P fertilizers by 6% of the imported P fertilizer based on 2016 values. Since the bioavailability of P from BA to plants is poorly investigated, this study addresses the effects of (i) gasification tempera-ture (710-849°C), (ii) processing method (gasification vs. combustion), (iii) biomass modifications by co-processing bagasse with chicken manure (BA+CM), and (iv) the soil (Brazilian Oxisol soil vs. nutri-ent poor substrate) on the bioavailability of P from BA to soybeans (Glycine max). Gasification of BA at 806 °C resulted in significantly highest uptake of P by soybeans and was around 0.33 mmol after 51 days growing. The bioavailability of P significantly increased due to co-gasification of bagasse and chicken manure (BA+CM) and the soybeans took up around 16% more P. Compared to the nutrient-poor substrate, the bioavailability of P in BA+CM ash treated Oxisol soil was signifi-cantly lower by 46% and there was no significant effect of processing method on the bioavailability of P from the BA+CM ash to soybeans. Contrary to the Oxisol soil, the bioavailability of P from co-combusted BA+CM ash was significantly higher compared to co-gasified BA+CM ash. In conclusion, co-processing of bagasse with nutrient rich residues can increase the value of BA as P fertilizer. The bioavailability of P from ash to plants depends on the P forms. Mineralogical analyses of ash P forms by NMR and X-ray diffraction are in progress and will be presented at the conference. T2 - European Biomass Conference & Exhibition CY - Lisbon, Portugal DA - 26.05.2019 KW - Sugarcane bagasse KW - Chicken manure KW - Plant growth test KW - Bioavailability KW - Co-combustion PY - 2019 AN - OPUS4-49272 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hüllmann, Dino T1 - Gas Dispersion Fluid Mechanics Simulation for Large Outdoor Environments N2 - The development of algorithms for mapping gas distributions and localising gas sources is a challenging task, because gas dispersion is a highly dynamic process and it is impossible to capture ground truth data. Fluid-mechanical simulations are a suitable way to support the development of these algorithms. Several tools for gas dispersion simulation have been developed, but they are not suitable for simulations of large outdoor environments. Here we present a concept of how an existing simulator can be extended to handle both indoor and large outdoor scenarios. T2 - 36th Danubia Adria Symposium on Advances in Experimental Mechanics CY - Pilsen, Czech Republic DA - 24.09.2019 KW - Gas dispersion simulation KW - CFD KW - Gas tomography PY - 2019 AN - OPUS4-49225 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute T1 - Determining Photoluminescence Quantum Yields of Molecular and Nanocrystal Emitters in the UV/vis/NIR/SWIR N2 - The comparison of different emitter classes and the rational design of the next generation of molecular and nanoscale reporters require accurate and quantitative photo-luminescence measurements. This is of special importance for all photoluminescence applications in the life and material sciences and nanobiophotonics. In the following, procedures for the determination of the spectroscopic key parameter photoluminescence quantum yield, i.e., the number of emitted per absorbed photons, in the UV/vis/NIR/SWIR are presented including pitfalls and achievable uncertainties and material-specific effects related to certain emitter classes are addressed. T2 - Kolloqium National Center for Nanoscience and Technology CY - Peking, People's Republic of China DA - 18.10.2019 KW - Fluorescence KW - Quantum yield KW - Integrating sphere spectroscopy KW - Dye KW - Nanocrystal KW - NIR KW - SWIR KW - Quantum dot KW - Fluorescence standard KW - Uncertainty KW - Calibration PY - 2019 AN - OPUS4-49362 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute T1 - Photoluminescence at BAM – Photoluminescence at BAM – Photophysical Studies, Quantum Yield Measurements, Multiplexing Strategies, and Standards N2 - Photoluminescence applications in the life and material sciences require bright molecular and nanocrystalline emitters, stimuli-responsive optical probes, signal enhancement, multiplexing, and barcoding strategies and traceable methods to quantify the signal-relevant optical properties of luminescent materials at the ensemble and single molecule/particle level. In this context, current research at Division Biophotonics of BAM is presented ranging from dye and nanocrystal photophysics, absolute measurements of photoluminescence quantum yields in the UV/vis/NIR/SWIR, lifetime multiplexing, and the development of different types of fluorescence standards for validating optical-spectroscopic measurements. T2 - Institutskolloquium IPHT CY - Jena, Germany DA - 22.10.2019 KW - Surface group analysis KW - NIR KW - SWIR KW - Quantum dot KW - Lanthanide KW - Cleavable probe KW - Lifetime KW - Multiplexing KW - Sensor KW - Assay PY - 2019 AN - OPUS4-49360 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute T1 - Nanocrystals with Luminescence in the vis, NIR and SWIR – Photophysics and Applications N2 - Luminescent nanocrystals like core/shell semiconductor quantum dots and lanthanide doped nanophosphors as well as gold nanoclusters with emission in the visible (vis) and particularly in the near infrared (NIR) and short wavelength infrared (SWIR) region have been increasingly used as reporters in the life sciences and for bioimaging studies in the last years. This has led to sophisticated core-shell particle architectures of different chemical composition utilizing semiconductor quantum dots and lanthanide-based nanocrystals and initiated the design of gold nanoclusters with different ligands. In addition, this led to an increasing number of quantitative spectroscopic studies focusing on the key performance parameter photoluminescence quantum yield to identify optimum particle structures. In the following, an overview of different classes of nanocrystalline emitters and their photophysics is provided and examples for the absolute characterization of the photoluminescence properties of these different vis/NIR/SWIR emitters are shown including excitation power density-dependent studies on the ensemble and single particle level. Also, the impact of such measurements on a profound mechanistic understanding of the underlying nonradiative deactivation pathways is highlighted as required for reporter design. T2 - MIMIT 2019 CY - Peking, People's Republic of China DA - 18.10.2019 KW - Fluorescence KW - Quantum yield KW - Integrating sphere spectroscopy KW - Dye KW - Nanocrystal KW - NIR KW - SWIR KW - Quantum dot KW - Lanthanide nanoparticle KW - Old nanocrystal KW - Imaging KW - Lifetime KW - Nanoparticle PY - 2019 AN - OPUS4-49361 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hübner, Oskar T1 - Luminescence lifetime encoding for flow cytometry with quantum-dot-encoded beads N2 - Spectral encoding of cells or particles and the discrimination of multiple spectral codes are a critical process in flow cytometry (FCM). Typical issues in spectral encoding are, e.g., the spectral overlap of codes, or the increasing complexity of instruments . The exploitation of the photoluminescence lifetime (LT) as an encoding parameter could be used to circumvent both of these issues, as it adds another dimension to the parameter space, or, when used as a stand-alone parameter, requiring only one excitation light source and one detector. While LT encoding was considered already decades ago it is still not implemented as a routine technique in FCM yet, mainly due to the challenge of very few photons being available within the limited transition time of a cell or particle through the laser spot. Recently, we demonstrated LT-FCM based on luminophores with ns LTs in a compact and low-cost flow cytometer. Measurements on polymer microbeads containing luminophores with distinctly different excited state LTs enabled the complete discrimination of three LT codes and five codes in total could be identified. Now, we have extended our approach towards considerably longer LTs by custom-made polymer microbeads loaded with different ratios of InP/ZnS and AgInS2 quantum dots. The use of these materials significantly expands the usable time range for LT encoding to up to several hundred ns. Our studies demonstrate the possibility to further increase the number of viable LT codes for multiplexing in LT-FCM without the need for extensive hardware modifications. T2 - Visions in Cytometry - 29th Annual Conference of the German Society for Cytometry CY - Berlin, Germany DA - 25.07.2019 KW - Multiplexing KW - Lifetime KW - Bead KW - Flow cytometry KW - Fluorescence KW - Quantum dot KW - InP KW - AIS KW - Dye KW - Encoding KW - Barcoding KW - Assay KW - Method PY - 2019 AN - OPUS4-49390 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - THES A1 - Vandrich, Jasmina T1 - Metabolic engineering in Halomonas elongata N2 - Halomonas elongata is a halophilic γ-proteobacterium that synthesizes and accumulates the compatible solute ectoine to cope with osmotic stress in saline environments. Ectoine possesses protecting properties and stabilizes proteins as well as whole cells against stresses like ionizing radiation and cytotoxins. These properties make ectoine a highly demanded ingredient in cosmetics and pharmaceuticals. To date H. elongata is the industrial Producer strain of ectoine, but several metabolic factors for optimum ectoine production remain to be explored. In this work, we used up to date Metabolic engineering approaches following the ‘Push, Pull, Block – strategy’ to examine targets that contribute to ectoine synthesis. Firstly, the basics of glucose catabolism were inspected to PUSH and enhance carbon flow towards ectoine synthesis. Secondly, lysine biosynthesis was targeted to BLOCK a pathway that is competing for precursors with ectoine synthesis. Thirdly, the mechanosensitive (MS) channels of H. elongata have been examined as possible excretion routes for ectoine. An overexpression of the ectoine excretion channels potentially could PULL out product at the end of ectoine synthesis and increase overall ectoine flux. For the interrogation of central metabolic pathways, we established the new molecular tool CRISPR-mediated interference (CRISPRi) for targeted modulation of gene expression. PUSH Glucose catabolism through the Entner-Doudoroff (ED) and Emden-Meyerhof-Parnas (EMP) pathway was targeted with CRISPRi and examined on gene expression level for ist response to changing salinity and different carbon sources. Changing salinity did not influence gene expression levels of glucose catabolism but the carbon source glucose triggered glycolysis through the (ED) pathway. When gene expression of the ED pathway was downregulated with CRISPRi, the growth rates remained constant. The observations indicate a metabolic overflow mechanism for glycolysis, in which fluxes are constantly high - even at lower salinity when no resources are demanded for ectoine synthesis. The further analysis of glucose to product conversion rates will advise optimum conditions for future industrial cultivation processes. BLOCK Lysine biosynthesis was downregulated with CRISPRi, which led to a significant increase in ectoine production. Hence, the blockage of lysine biosynthesis would be a valuable strategy for the optimization of the industrial producer strain in future studies. PULL MS channels and ectoine regulation are inevitably connected in osmoadaptation. Therefore, ectoine excretion, growth performance and gene expression levels of the MS channels were monitored in steady state conditions and in response to osmotic shock in the wildtype strain and in a MS channel deletion mutant. We observed that the MS channels were essential for the survival of osmotic shock but surprisingly their presence reduced cell growth under high salinity. The MS channels were only partially responsible for ectoine excretion. Thus, alternative ectoine excretion channels must exist and remain to be explored. KW - Halomonas elongata KW - Ectoine KW - CRISPR dCas9 PY - 2019 SP - 1 EP - 94 CY - Potsdam AN - OPUS4-51094 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - McMahon, Dino Peter T1 - The evolution of termite immunity N2 - The termites are a derived eusocial lineage of otherwise non-social cockroaches. Understanding the proximal and ultimate drivers of this major evolutionary transition represents an important goal in biology. One outstanding question concerns the evolution of termite immunity, which is thought to have undergone broad-sweeping adaptations in order to enhance group-level immune protection. To understand the evolutionary origins of termite immunity, we conducted qualitative and quantitative transcriptome analyses along a gradient of sociality. Firstly, we aimed to identify large-scale genetic shifts in immune traits linked to eusociality by comparing immune gene repertoires in solitary and subsocial cockroaches and across a range of eusocial termite lineages. Secondly, we compared the responses of a solitary cockroach, a subsocial wood-roach and different castes of a lower termite species to a non-specific immune challenge, in order to understand how sociality may have influenced the evolution of immune gene regulation. Firstly, we found that termites have a broadly representative repertoire of canonical immune genes as compared to gregarious cockroaches and subsocial wood-roaches. Secondly, with respect to immune challenge, the solitary cockroach and the subsocial wood-roach displayed a similarly comprehensive induced response, while the termite response was considerably dampened by comparison and strongly influenced by caste; with reproductives displaying a generally higher constitutive level of immune-gene expression compared to sterile castes. In summary we did not find termite eusociality to be associated with significant changes in immune gene diversity, but rather to be linked with significant modifications to the regulation of immunity following the origin of division of labour. T2 - Institute for Evolution and Biodiversity Lecture Series, Universität Münster CY - Münster, Germany DA - 20.02.2019 KW - Immunity KW - Evolution KW - Ecology KW - Termite KW - Molecular PY - 2019 AN - OPUS4-49644 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - McMahon, Dino Peter T1 - Infection stage and pathogen life cycle determine collective termite behaviour N2 - Social insects nesting in soil environments are in constant contact with entomopathogens and have evolved disease resistance mechanisms within a colony to prevent the occurrence and spread of infectious diseases. Among these mechanisms: mutual grooming reduces the cuticular load of pathogens, and burial of cadavers and cannibalism can prevent pathogens from replicating within the group. We explored how the rate and type of collective behavioural response is determined by stepwise infection dynamics operating at the level of the individual. Specifically, we infected the eastern subterranean termite Reticulitermes flavipes with different types of infectious particle and infection route of the entomopathogenic fungus Metarhizium anisopliae and recorded behavioural responses of nestmates to individuals at different times during the progression of infections. As expected, termites groomed conidia-exposed individuals significantly more than controls. Interestingly, grooming was significantly elevated after fungal germination than before, suggesting that pathogen growth cues act as strong stimulators of allogrooming. Conidia-exposed termites were cannibalized, but only after they became visibly ill. By contrast, termites did not groom blastospore-injected individuals more than controls at any time-point following infection. Instead, we found that blastospore-injected individuals were continually cannibalized at a low-level following injection with either viable or heat-killed blastospores, with a marked increase in cannibalism after termites injected with viable blastospores became visibly ill and were close to death. Together, these findings point to the importance of host condition as a cue for social hygienic behavior, and that the host itself appears to emit essential sickness cues that act as targets for its own sacrifice. This demonstrates that termites have independently evolved to both identify and destructively respond to sickness. T2 - VI Central European Meeting of the IUSSI 2019 CY - Wien, Austria DA - 19.03.2019 KW - Termite KW - Evolution KW - Social immunity PY - 2019 AN - OPUS4-49643 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Vogl, Jochen T1 - New Hematite and Magnetite Reference Material for In Situ 56Fe Measurements N2 - Characterisation of two potential reference materials. Hematite (HMIE-NP-B01) and magnetite (MARK-NP-B01) for Fe isotope ratios in situ analysis via LA-MC-ICP-MS. T2 - EWCPS 2025 CY - Berlin, Germany DA - 03.03.2025 KW - Fe isotope KW - Fe-dominated minerals KW - Laser ablation KW - LA-MC-ICP-MS PY - 2015 AN - OPUS4-62827 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Seeger, Stefan T1 - AEROMET - Observation of quickly changing element mass concentrations in an ambient aerosol using portable TXRF N2 - Measurements of aerosol particles are vital for enforcing EU air quality regulations to protect human health, and for research on climate change effects. Although metrics such as PM10 and PM2.5 are currently in use, the level of uncertainty of aerosol metrics is too high and the traceability is insufficient. The project AEROMET, which has been started in June 2017 aims at implementing improvements in a) the uncertainty of particle mass, size and number concentration measurements and b) in the characterization of regulated components in airborne particles. Both are demanded by existing networks within the EU as well as by global atmospheric research. On-site measurement campaigns One of the objects is the application of mobile x-ray spectroscopy techniques combined with aerosol sampling techniques for quantifying particle compositions in the field for real time analysis. During two in-field measurement campaigns in Budapest, Hungary in May 2018 and Cassino, Italy in September 2018 the size dependent mass concentrations of specific elements in ambient aerosols were monitored under dynamic conditions. Typically, airborne particles are sampled on filter substrates. During this project new sampling methods with specially designed substrate holders for an in-situ TXRF analysis were developed and applied for the first time. This approach allows a direct time and size resolved analysis without laborious digestion steps and a reduced risk of contamination. Aerosol particles were sampled in a 13-stage DLPI impactor - size range from 0,03 µm to 10 µm - which was equipped with special adapters for acrylic discs of 30 mm diameter, serving as substrates. TXRF analysis was performed on site with the transportable spectrometer S2 PICOFOX (Bruker Nano GmbH) equipped with a Mo X-ray tube and a 30 mm² Silicon Drift Detector (SDD). Excitation conditions were 50 kV, 600 µA, measurement time 1000 s. Quantification was based on internal standardization using 50 ng of Y in solution, which was pipetted into the centre of the discs prior to sampling. At moderate air pollution levels, i.e. PM10 ~ 20 µg/m³, sampling times of less than 2 hours were enough for the detection of elements in different particle size bins. The in-situ approach and the high sensitivity of TXRF enables the observation of rather quick changes in the quantity and distribution of elements in an ambient aerosol on the day of sampling, as the below example from the Cassino field campaign on 11 Sept. 2018 shows: The analysis of the morning and afternoon sampling shifts reveals the occurrence of the elements Fe, Ca and Si in different size bins as well as their significant temporal change in respective mass concentrations over the day while the distributions of several other elements in the aerosol remain unchanged. The validation of these results by backup measurements is planned. T2 - European Aerosol Conference EAC 2019 CY - Gothenburg, Sweden DA - 25.08.2019 KW - TXRF KW - Ambient air KW - Aerosol KW - Cascade impactor KW - Element analysis PY - 2019 AN - OPUS4-49582 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Kayser, Y. T1 - AEROMET – Traceable and reliable chemical analysis of aerosols by X-ray spectrometry N2 - Traceable and reliable chemical element analysis of aerosols by X-ray spectrometry was investigated using aerosol samples from field campaigns which have been measured in the GIXRF-beamline at BESSY. The reference-free XRF approach allows for a traceable analysis of the mass deposition. Traceable quantification by means of XRF can be transfered to benchtop instrumentation used in the laboratory Chemical and dimensional analysis of deposited aerosol allows for a comprehensive analysis of aerosols, e.g. for toxicity assessment and determination of the source The folowing elements could be identified and quantified in the field samples: Al, Si, P, S, Cl, K, Ca, Ti, Cr, Mn, Fe, Ni, Cu, Zn, As, Se, Br, Rb, Sr, Y, W, Pb. T2 - European Aerosol Conference EAC 2019 CY - Gothenburg, Sweden DA - 25.08.2019 KW - TXRF KW - Element mass concetration KW - Ambient aerosol KW - Cascade impactor PY - 2019 AN - OPUS4-49583 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Horn, Wolfgang T1 - Selection of low emittiong material for the construction of display cases based on the BEMMA procedure N2 - Museums worldwide are equipped with different display cases. Exhibit display cases should protect cultural objects from dust as well as from mechanical and physical damage. To ensure a stable climate inside the display cases, a low air exchange rate is maintained. Typically air exchange rates are often smaller than 0.1 d 1, which can result in rising concentrations of potential harmful immissions inside of the display cases due to emissions from materials. Especially high concentrations of organic acids, which can emit from e.g. sealing materials, can produce damage of cultural objects. In 2012 BAM introduced a procedure witch is called: BEMMA-Scheme (Bewertung von Emissionen aus Materialien für Museumsausstattungen) which stands for: “Assessment of Emissions from Materials for Museum Equipment”. Micro chambers are used for VOC emission tests of display case construction materials, e.g. textiles, plastics, sealing material, coatings and others. Each sampling procedure is carried out in duplicate. Emissions like formic acid, acetic acid, formaldehyde and oximes are excluded and the sum of emissions of VVOCs, VOCs and SVOCs is limited. For a positive assessment all listed criteria must be fulfilled; otherwise the display construction material fails the BEMMA scheme. The BEMMA scheme is not a guarantee for an emission free display case, but a necessary requirement for the choice of suitable materials for emission and immission reduced display cases. T2 - Materials Testing Symposium CY - New York City, USA DA - 06.11.2019 KW - Museum KW - Emission KW - Dispay case KW - BEMMA KW - VOC PY - 2019 AN - OPUS4-49589 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Lehmann, Paula T1 - A Rapid Test for Leaching Studies of Biocides from Building Materials N2 - Regardless of its ban in agricultural use, the triazine derivative terbutryn is still used as a biocide against biofouling in building materials, such as façade colors and roof tiles. From there, it is washed off and may contaminate soil and surface waters, where it shows ecotoxicological behavior. For understanding of these leaching processes, analytical methods that can detect terbutryn in traces are necessary. In contrast to separation methods (Gas (GC) or liquid chromatography (LC)) coupled to mass spectrometry (MS), enzyme immunoassays (EIAs) have proven to be adequate tools for environmental monitoring. Compared to GC-or LC-MS, they are cheap, require only limited time and experimental expertise and enable high throughput. For quantification of terbutryn, EIAs have been established, with a limit of detection (LOD) of 50 ng L-1. For leaching experiments however, a lower LOD would be advantageous. For detection of terbutryn we developed a direct competitive ELISA based on a monoclonal antibody: Terbutryn and an enzyme-terbutryn conjugate (“tracer”) compete for the binding sites of the immobilized antibody. The bound tracer converts a colourless substrate into a blue-coloured product, which can be detected via spectrophotometry. For quantification of terbutryn, a sigmoidal calibration curve is used. For establishing of the EIA, a new tracer based on a terbutryn surrogate (“hapten”) was synthesized. After optimization of the experimental conditions, the immunoassay exhibited a more than ten-fold increased sensitivity (LOD: 3 ng L-1), high stability against sample compounds (Ca2+, NaCl) and lower cross-reactivities against structurally related compounds, than reported before. Analysis of spiked samples was possible with high precision (inter-assay CV: < 10 %) and accuracy (recoveries from spiked samples: 89 % ± 10%). We therefore propose it as quick and reliable method for leaching studies of terbutryn out of building materials. T2 - Adlershofer Forschungsforum CY - Berlin, Germany DA - 11.11.2019 KW - ELISA KW - Terbutryne KW - Hapten Immunoassay KW - Triazine herbicide PY - 2019 AN - OPUS4-49595 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bucar, K. T1 - Performance of a Sharp GP2Y low-cost aerosol PM sensor N2 - Simple particulate matter sensors are gaining popularity due to their low price, easy handling and good temporal resolution. In this presentation, we report on the performance of a Sharp optical PM sensor GP2Y1010AU0F, which costs less than 15 €. The sensor is built around an infrared emitting diode (ILED) and a phototransistor detecting the light scattered from the aerosol particle. An electronic circuit shapes the detected light in a pulsed signal. The manufacturer advises sampling the output signal 280 microseconds after the ILED pulse. The measured output voltage is an indicator of dust concentration. We have built two identical simple PM monitoring devices using Raspberry Pi 3 computer interfacing the PM sensor with Microchip’s MCP3002 ADC via SPI. The ADC is capable of more than 100 ksamples/s at 10-bit resolution. The Rpi3 was pulsing the sensor at 10Hz, digitizing and saving the data and sending the results wirelessly. Sensor’s output pulse shape was sampled with 10 microsecond time steps and saved, thus making offline analysis possible. A time jitter of output pulses can be observed and suggests a peak fitting as a better approach to the signal readout compared to the single sampling at a fixed time after pulse triggering We compared both methods. T2 - European Aerosol Coference EAC 2019 CY - Gothenburg, Sweden DA - 25.08.2019 KW - Aerosol KW - Low cost aerosol PM sensor KW - PM PY - 2019 AN - OPUS4-49581 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Seeger, Stefan T1 - Quantification of element mass concentrations in aerosols by combination of cascade impactor sampling and in-situ TXRF Spectroscopy N2 - A mobile Bruker S2 Picofox TXRF spectrometer has been used in two field campaigns within the EMPIR env07 AEROMET project for the on-site analysis of cascade impactor aerosol samples.The results show that even at moderate air pollution levels – i.e.PM10 fairly below 20 μg/m³ - element mass concentrations in air in the range of 100 pg/m³could be measured in up to 13 size bins after sampling times of less than only 0.5 days. T2 - UFP 2019 Ultrafeinstaub in der Atmosphäre und in Innenräumen, 3. Symposium CY - Technische Universität Berlin, Germany DA - 19.09.2019 KW - TXRF ambient air aerosol chemical analysis aerosol element composition KW - Aerosol KW - TXRF KW - Cascade impactor KW - Aerosol element alanysis KW - Aerosol element mass concentration PY - 2019 AN - OPUS4-49580 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Ecke, Alexander T1 - Immunoassay for the determination of amoxicillin in water samples N2 - Herein we present the data for a newly developed immunoassay for the determination of amoxicillin (AMX) in water samples using a commercially available monoclonal anti-AMX antibody. During optimization and testing of the assay, we observed a significant decrease of the C-value (IC50) of the ELISA calibration curves with aged standard solutions. Running the assay with standard solutions of synthesized AMX hydrolysis products revealed that this decreased C-value could be attributed mainly to the hydrolysis product amoxicilloic acid. Therefore, the limit of detection of the ELISA for AMX determination in water could be enhanced by either hydrolyzing the samples or testing for amoxicilloic acid as marker substance. T2 - Adlershofer Forschungsforum CY - Berlin, Germany DA - 11.11.2019 KW - Amoxicillin KW - Immunoassay KW - Water Analysis KW - Hydrolysis products PY - 2019 AN - OPUS4-49588 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Nadejde, C. A1 - Neamtu, Mariana A1 - Hodoroaba, Vasile-Dan A1 - Schneider, Rudolf A1 - Paul, Andrea A1 - Ababei, G. A1 - Panne, Ulrich T1 - Green Fenton-like catalysts for the removal of water pollutants N2 - Two types of surface modified magnetite (Fe3O4) nanoparticles, coated with either tannic acid (TA) or dissolved natural organic matter (NOM), were evaluated as magnetic heterogeneous catalysts. Simple and efficient procedures for the synthesis of the magnetic catalysts were employed, their properties being fully assessed by various characterization techniques. The catalytic activity in heterogeneous oxidation of aqueous solutions containing Bisphenol A (BPA) over the catalysts was comparatively studied. The optimum experimental parameters were: 1g/L of catalysts, 10 mM H2O2, under UV irradiation. The highest mineralization rates were observed for Fe3O4-TA catalyst. More than 80% of BPA were removed after 30 minutes of reaction time under the specified experimental conditions. The results showed that the obtained catalysts are suitable candidates for the removal of pollutants in wastewaters by means of heterogeneous reaction T2 - TechConnect World Innovation Conference Nanotech 2015 CY - Washington, DC, Maryland, USA DA - 14.06.2015 KW - Nanocatalysts KW - Characterization KW - Fenton oxidation KW - Wastewater KW - Bisphenol A degradation PY - 2015 SN - 978-1- 4987-4733-2 SN - 978-1-4987-4728-8 VL - 2 SP - 87 EP - 90 PB - CRC Press, Taylor&Francis Group AN - OPUS4-40074 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Altmann, Korinna T1 - Overview of CUSP and PlasticTrace N2 - The presentation summarises the work of CUSP and PlasticTrace EU joint research projects of the last year. T2 - Microplastics Scientific Workshop of PlasticsEurope CY - Amsterdam, The Netherlands DA - 08.05.2023 KW - Microplastics KW - Microplastics standardisation KW - Reference materials KW - Polymer 3R PY - 2023 AN - OPUS4-57460 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bonse, Jörn T1 - Bacterial adhesion on ultrashort pulse laser processed surfaces ― more than size matters! N2 - Bacterial biofilms are aggregates of bacterial cells, often attached to a surface and enclosed by a self-produced extracellular matrix which confers increased stress tolerance and resistance to cleaning. Biofilm formation leads to biofouling which gives rise to high costs in numerous technical settings due to biocorrosion and biodegradation. However, biofilms can also be attractive for industrial settings such as wastewater treatment systems or for soil bioremediation processes. Hence, the control of bacterial adhesion to a surface is of major concern. Surface topography strongly influences bacterial adhesion. Therefore, one promising way to achieve bacteria-guiding surfaces lies in the contactless and aseptic large-area laser processing of technical surfaces. We used short and ultrashort pulsed laser systems to generate different surface textures, mainly high-spatial-frequency and low-spatial-frequency laser-induced periodic surface structures, LIPSS (HFSL and LFSL), on Ti, Ti-alloy, steel, and polymers (PET and PE). Pristine (polished) and laser processed samples were subjected to bacterial adhesion experiments with two different Escherichia coli strains and Staphylococcus aureus as test organisms. The bacterial strains differed in their cell wall structure (grampositive vs. gramnegative strains), in size, shape, the occurrence of cell appendages, and in their biofilm forming capabilities. Adhesion patterns were analyzed microscopically and compared regarding the respective test strain and surface topography. Our results revealed that adhesion behavior strongly depends not only on the material’s topography and chemistry, but also on the specific bacterial strain, the presence of cell appendages, and ambient growth conditions. T2 - 13th International Conference on Photoexcited Processes and Applications, ICPEPA-13 CY - Lecce, Italy DA - 14.09.2025 KW - Biofilm KW - Bacterial adhesion KW - Laser-induced periodic surface structures (LIPSS) KW - Ultrashort laser pulses PY - 2025 AN - OPUS4-64166 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Stolar, Tomislav A1 - Alić, Jasna A1 - Casali, Lucia A1 - Gugin, Nikita A1 - Baláž, Matej A1 - Michalchuk, Adam A.L. A1 - Emmerling, Franziska ED - Stolar, Tomislav T1 - Mechanochemistry: Looking back and ahead N2 - Starting with the discovery of fire and the preparation of food in prehistoric times, mechanochemistry is the oldest form of chemistry that humans have controlled. Mechanochemical practices, such as grinding with a mortar and pestle, continued into the Middle Ages until dedicated scientific studies began in the 19th century. Since then,research in mechanochemistry has shown that many chemicalreactions can be performed via mechanical force without or with small amounts of solvent. Besides being time, material, and energy efficient, mechanochemical reactions often yield products that differ from those obtained in solution. Therefore, not only is mechanochemistry greener and more sustainable than conventional solution chemistry, but it also has the added value of providing new reactivity and selectivity. This is especially important today, when chemists need to invent high-performance materials, intermediates, and products with the use of sustainable feedstocks and develop environmental remediation pathways. At the same time, time-resolved in situ monitoring and computational modeling are necessary for addressing fundamental questions about the atomistic, molecular, and electronic nature of mechanochemical reactivity. Integrating digitalization, robotics, and artificial intelligence tools promises to increase the reproducibility and scalability of mechanochemical processes. Further evolution of mechanochemistry is expected to have a transformative effect on the chemical industry. KW - Mechanochemistry PY - 2026 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-653962 DO - https://doi.org/10.1016/j.chempr.2025.102880 SN - 2451-9294 SP - 1 EP - 27 PB - Elsevier BV AN - OPUS4-65396 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Aumont, Cédric T1 - Harnessing near-chromosome level quality genomes to explore the evolution of termite immunity N2 - The phylogeny of the Blattodea boasts a wide degree of sociality spanning from solitary cockroaches to advanced ecosystem-dominating higher termite societies. The emergence of sociality in termites was associated with the acquisition of a diverse range of social structures. Previous work has found evidence for a caste-specific social defence system in termites leading to an immune system that may favour group over individual defence. While preliminary work suggests a correlation between social transitions and a reduction of immune gene family diversity, the lack of available high-quality termite genomes hampers complete knowledge of the true diversity of immune gene evolution across termite phylogeny. Here, we report on the sequencing and near-chromosome level assembly of 48 high-quality long-read-based genomes across major termite and cockroach sister-branch lineages. We investigate the diversity and evolutionary history of immune genes across genomes, focusing particular attention on correlations between immune gene evolution and transitions in sociality over termite phylogeny. T2 - Royal Entomological Society Annual Meeting - Ento23 CY - University of Exeter, Falmouth, UK DA - 05.09.2023 KW - Immune gene family KW - Termite phylogeny KW - Eusociality KW - Group defence PY - 2023 AN - OPUS4-58296 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Aumont, Cédric T1 - Immune gene family diversity across insects and Blattodea N2 - Insecta is one of the most diverse phyla in the animal kingdom, with species living in all types of habitats encountering an even greater diversity of pathogens and parasites. Defence strategies against such harmful threats led to a variety of molecular mechanisms, ecological shifts, and genetic innovations. Gene families underlying the molecular basis of the immune responses have evolved within the boundaries given by the species ecology. Here, we explore the evolution of some emblematic immune gene families throughout the Insecta phylum shedding light on remarkable genetic events such as gene duplication or gene loss. We followed a workflow based on the Hidden Markov model to search for immune genes in 55 high-quality genomes of insects. We highlight the emergence of group defence in social species as an ecological shift that released selection pressure on immune gene families notably in Blattodea. Further, we draw attention to certain gene families and the link between their diversity and the specificities of the species’ microbiota. Overall, we report data on immune gene diversity in insects. T2 - International Conference for Blattodea Research CY - Münster, Germany DA - 03.04.2023 KW - Immune gene family KW - Genomics KW - Blattodea PY - 2023 AN - OPUS4-58298 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - McMahon, Dino Peter T1 - Evolutionary genomics of termite sociality N2 - Termite sociality is thought to have evolved around 150 million years ago and is therefore ancient. Reconstructing the transitions that led to the evolution of this group of ecologically dominant insect societies is challenging. We sought to address this by sequencing near-chromosome-quality genomes from the major solitary, subsocial and social lineages of termites and their nearest blattodean relatives. We present findings from a comparative analysis of the sequenced genomes, where we explore the molecular underpinnings of termite sociality, and seek to understand the evolutionary origins of termite castes. At a broader scale, we test the extent to which a two-step process involving an initial expansion of genomic elements in cockroaches followed by extensive genome rearrangements in termites, may have acted as an important mechanism of evolutionary change. We then ask whether specific genomic processes may have facilitated evolutionary novelty, for example, through the analysis of transposon-host gene associations across the social gradient. We also report on findings that combine genomes with brain transcriptomics to explore the mechanistic basis of termite phenotypic plasticity, thereby enabling a first large-scale comparative genomic analysis of the evolutionary origins of termite sociality. T2 - International Congress of Entomology (ICE) 2024 CY - Kyoto, Japan DA - 25.08.2024 KW - Termite KW - Reference genome KW - Genomics PY - 2024 AN - OPUS4-61648 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Aumont, Cédric T1 - Exploring the evolution of termite immunity across phylogeny, sociality and foraging behaviour N2 - The phylogeny of the Blattodea boasts a wide degree of sociality spanning from solitary cockroaches to advanced ecosystem-dominating termite societies. The emergence of sociality in termites was associated with the acquisition of a diverse range of social structures and caste-specific behaviours. From wood-dwelling to fungus-growing and cooperative scouting, termite foraging strategies require different immune defences to confront the diverse pathogens found in the foraging environment. Previous work has found evidence for a caste-specific social defence system in termites leading to an immune system that may favour group over individual defence. While preliminary work suggests a correlation between social transitions and a reduction of immune gene family diversity, the lack of available high-quality termite genomes hampers complete knowledge of the true diversity of immune gene evolution across termite phylogeny. Here, we report on the sequencing and near-chromosome level assembly of 47 high-quality long-read-based genomes across major termite and cockroach sister-branch lineages. We investigate the diversity and evolutionary history of immune genes across genomes, focusing on correlations between immune gene evolution, transitions in sociality and foraging behaviour diversity over termite phylogeny. T2 - ASAB Spring Meeting CY - Exeter, UK DA - 23.04.2024 KW - Termite KW - Immunity PY - 2024 AN - OPUS4-61695 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Aumont, Cédric T1 - The social brain of termites: investigating gene co-expression network in the Blattodea N2 - The transition to eusociality in termites arose from the sub-social and solitary cockroaches. With it, a more complex ontogeny derived from an ancestral linear developmental pathway common to all cockroaches and a wide array of morphologically distinct castes carrying out the division of labour emerged. We sought to underpine the complexity of this evolutionary transition at the transcriptomic level. We present the gene co-expression network analysis of 305 RNA-seq samples from the brains of 15 species of cockroaches and termites from different instars and castes. With this dataset, we investigate how the network of gene evolved between solitary cockroaches, sub-social cockroach and eusocial termites. Moreover, we investigate the emergence of the two most striking evolutionary innovations in termites, the appearance of the soldier caste, common in nearly all termites and thought to have evolved once and subsequently lost in some species, and the true worker caste, the sterile workforce of the colony thought to have derived from the totipotent false worker caste in four different lineages of termites independently. T2 - International Congress of Entomology CY - Kyoto, Japan DA - 25.08.2024 KW - Termite KW - Genetics PY - 2024 AN - OPUS4-61696 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Altmann, Korinna T1 - Challenges in microplastics standardisation N2 - This talk addresses the challanges in microplastic analytics. It shows the need of standards, analytics and reference materials for accurate and reliable measurements. It explains the state of the art for referenence materials in this field and their problems. A solution is presented with PET tablets. The urgent need of harmonisation it also emphasised. T2 - MARII Summit CY - Madrid, Spain DA - 15.10.2025 KW - Microplastics KW - Reference materials PY - 2025 AN - OPUS4-64488 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Neamtu, Mariana T1 - Preparation, characterization and application of magnetic Fe3O4/PEG nanoparticles immobilized with ferrous oxalate or ferric citrate for removal of bisphenol A from aqueous solution N2 - The scope of our study was to prepare Fe-based highly active catalysts for water treatment processes. The reactive nanomaterials were synthesized by chemical precipitation; the post-synthesis coating of the as obtained nanostructures was achieved by capping the magnetic cores with a polymeric surfactant, polyethylene glycol (PEG). The resulted Fe3O4/PEG nanoparticles were further used to immobilize two types of reactive materials on their surface, either ferrous oxalate (FO) or ferric citrate (FC), yielding the final products – two green Fenton-like heterogeneous nanocatalysts. The sensitized catalysts were characterized by several microstructure characterization techniques such as X-ray diffraction (XRD), vibrating sample magnetometry, BET, scanning electron microscopy (SEM), and energy dispersive X-ray spectroscopy (EDX). All experiments were performed on a laboratory scale set-up. Important variables such as effect of hydrogen peroxide concentration, UV light, the amount of catalyst and contact time for the catalytic wet peroxide oxidation (CWHPO) of BPA were examined. The results indicate that the oxidation rate increased under UV light in the presence of low-concentration H2O2. T2 - Designing New Heterogeneous Catalysts Faraday Discussion CY - London, UK DA - 04.04.2016 KW - Nanocatalysts KW - Characterization KW - Fenton oxidation KW - Wastewater KW - Bisphenol A degradation PY - 2016 AN - OPUS4-40077 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Abdallah, Khaled A1 - Stock, S. C. A1 - Heeger, Felix A1 - Koester, M. A1 - Nájera, F. A1 - Merino, C. A1 - Spielvogel, S. A1 - Gorbushina, Anna A1 - Kuzyakov, Y. A1 - Dippold, M. A. T1 - Nitrogen Gain and Loss Along an Ecosystem Sequence: From Semi-desert to Rainforest N2 - Plants and microorganisms, besides the climate, drive nitrogen (N) cycling in ecosystems. Our objective was to investigate N losses and N acquisition strategies along a unique ecosystem-sequence (ecosequence) ranging from arid shrubland through Mediterranean woodland to temperate rainforest. These ecosystems differ in mean annual precipitation, mean annual temperate, and vegetation cover, but developed on similar granitoid soil parent material, were addressed using a combination of molecular biology and soil biogeochemical tools. Soil N and carbon (C) contents, δ15N signatures, activities of N acquiring extracellular enzymes as well as the abundance of soil bacteria and fungi, and diazotrophs in bulk topsoil and rhizosphere were determined. Relative fungal abundance in the rhizosphere was higher under woodland and forest than under shrubland. This indicates toward plants' higher C investment into fungi in the Mediterranean and temperate rainforest sites than in the arid site. Fungi are likely to decompose lignified forest litter for efficient recycling of litter-derived N and further nutrients. Rhizosphere—a hotspot for the N fixation—was enriched in diazotrophs (factor 8 to 16 in comparison to bulk topsoil) emphasizing the general importance of root/microbe association in N cycle. These results show that the temperate rainforest is an N acquiring ecosystem, whereas N in the arid shrubland is strongly recycled. Simultaneously, the strongest 15N enrichment with decreasing N content with depth was detected in the Mediterranean woodland, indicating that N mineralization and loss is highest (and likely the fastest) in the woodland across the continental transect. Higher relative aminopeptidase activities in the woodland than in the forest enabled a fast N mineralization. Relative aminopeptidase activities were highest in the arid shrubland. The highest absolute chitinase activities were observed in the forest. This likely demonstrates that (a) plants and microorganisms in the arid shrubland invest largely into mobilization and reutilization of organically bound N by exoenzymes, and (b) that the ecosystem N nutrition shifts from a peptide-based N in the arid shrubland to a peptide- and chitin-based N nutrition in the temperate rainforest, where the high N demand is complemented by intensive N fixation in the rhizosphere. KW - Nitrogen KW - Rhizosphere KW - Microbial abundance KW - Natural abundance of 15N KW - Nitrogen fixation KW - Nitrogen uptake PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-543708 DO - https://doi.org/10.3389/fsoil.2022.817641 SN - 2673-8619 VL - 2 SP - 1 EP - 14 PB - Frontiers Media CY - Lausanne AN - OPUS4-54370 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Le, Quynh Hoa A1 - Bäßler, Ralph A1 - Kratzig, Andreas A1 - Bettge, Dirk A1 - Kranzmann, Axel A1 - Knauer, S. T1 - Droplet corrosion of CO2 transport pipeline steels N2 - In this work, the focus was set on the corrosion process of condensate as drops on the surface of carbon steels (X52, X70), martensitic steel UNS S41500, and superaustenite UNS N08031 in CO2 atmosphere with impurities at 278 K (to simulate the transportation condition in a buried pipeline). Exposure tests were performed at both normal pressure and high pressure where CO2 is supercritical or in dense phase. The drop, 1 ‑ 10 μL in volume, was prepared by dropping CO2 saturated ultra-pure water onto the surface of steel coupons in a one-liter-autoclave. The CO2 gas stream, simulating the oxyfuel flue gas with varying concentration of impurities (SO2 and O2 ), was then pumped into the autoclave to observe the condensation and corrosion impacts of impurities. Comparable exposure tests were carried out with the same gas mixture and the same volume of water as vapor to observe the drop formation and the corrosion process that follows. The wettability and stability of drops on the surface of steel coupons in CO2 supercritical/dense phase environment was evaluated additionally by contact angle measurement. T2 - NACE International Annual Corrosion Conference CY - Phoenix, AZ, USA DA - 15.04.2018 KW - Geothermal KW - Coating KW - SiO2 KW - Polyaniline KW - Corrosion PY - 2018 SP - 10845, 1 EP - 11 PB - Omnipress CY - Houston AN - OPUS4-44917 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bäßler, Ralph T1 - Suitability of Metallic Materials in CC(U)S Applications N2 - Commercially available carbon steels are suitable for compression and pipelines as long as moisture content and impurities are limited. (water 50 to 100 ppmv, SO2 and NO2 ca. 100 ppmv). Corrosion rates increase with increasing water content. (0.2 – 20 mm/a). Condensation of acids and therefore droplet formation is always possible, even at low water contents. A low SO2 content within the CO2-stream might be more important than a low water content. Cr13-steels showed a general susceptibility to shallow pitting and pitting. So, they seem to be not suitable for CCUS applications. Low alloyed steels showed better corrosion behavior. � (predictable uniform corrosion) For direct contact with saline aquifer fluids only high alloyed steels shall be used. T2 - EUROCORR 2021 CY - Budapest, Hungary DA - 20.09.2021 KW - Carbon capture storage KW - Corrosion KW - Steel KW - CCS KW - CCU KW - CO2 PY - 2021 AN - OPUS4-53461 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Knabe, Nicole T1 - Genetic manipulation of protective pigments in a rock-inhabiting model fungus Knufia petricola A95 N2 - Black ascomycetous microcolonial fungi are persistent inhabitants of rock surfaces, but are especially conspicuous in hostile environments like cold and hot deserts. The unique robustness of MFCs is supported by protective pigments, like melanin and carotenoids. We study the role of these pigments in the stress resistance of the model rock fungus Knufia petricola (Chaetothyriales) strain A95. T2 - 13th European Conference of Fungal Genetics CY - Paris, France DA - 03.04.2016 KW - MCF KW - EPS KW - Pigments PY - 2016 AN - OPUS4-37969 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Seiffert, Franz A1 - Bandow, Nicole A1 - Kalbe, Ute A1 - Milke, R. A1 - Gorbushina, Anna T1 - Laboratory tools to quantify biogenic dissolution of rocks and minerals: a model rock biofilm growing in percolation columns N2 - Sub-aerial biofilms (SAB) are ubiquitous, self-sufficient microbial ecosystems found on mineral surfaces at all altitudes and latitudes. SABs, which are the principal causes of weathering on exposed terrestrial surfaces, are characterized by patchy growth dominated by associations of algae, cyanobacteria, fungi and heterotrophic bacteria. A recently developed in vitro system to study colonization of rocks exposed to air included two key SAB participants - the rock-inhabiting ascomycete Knufia petricola (CBS 123872) and the phototrophic cyanobacterium Nostoc punctiforme ATCC29133. Both partners are genetically tractable and we used them here to study weathering of granite, K-feldspar and plagioclase. Small fragments of the various rocks or minerals (1–6 mm) were packed into flow-through columns and incubated with 0.1% glucose and 10 μM thiamine-hydrochloride (90 μL min−1) to compare weathering with and without biofilms. Dissolution of the minerals was followed by: (i) analysing the degradation products in the effluent from the columns via Inductively Coupled Plasma Spectroscopy and (ii) by studying polished sections of the incubated mineral fragments/grains using scanning electron microscopy, transmission electron microscopy and energy dispersive X-ray analyses. K. petricola/N. punctiforme stimulated release of Ca, Na, Mg and Mn. Analyses of the polished sections confirmed depletion of Ca, Na and K near the surface of the fragments. The abrupt decrease in Ca concentration observed in peripheral areas of plagioclase fragments favored a dissolution-reprecipitation mechanism. Percolation columns in combination with a model biofilm can thus be used to study weathering in closed systems. Columns can easily be filled with different minerals and biofilms, the effluent as well as grains can be collected after long-term exposure under axenic conditions and easily analyzed. KW - Biotic weathering KW - Flow-through columns KW - Plagioclase KW - K-feldspar KW - Granite PY - 2016 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-373395 DO - https://doi.org/10.3389/feart.2016.00031 SN - 2296-6463 VL - 4 SP - Article 31, 1 EP - 10 PB - Frontiers in Earth Science CY - Lausanne AN - OPUS4-37339 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - THES A1 - Gerrits, Ruben T1 - An experimental study of fungal olivine weathering N2 - Free-living and (ecto)-mycorrhizal fungi enhance rock weathering. In their roles as mineral weathering agents and mutualistic partners of phototrophs, fungi supply primary producers like plants and phototrophic microorganisms with mineral-derived nutrients. The exact mechanisms behind fungus-induced mineral weathering processes are however not well understood. Progress can be achieved here by reproducible experimental simulations of the natural processes, using well-characterised model organisms and minerals. In this study, the weathering-affecting, rock-inhabiting fungus, Knufia petricola A95 and the Fe-bearing olivine (Fe0.2Mg1.8SiO4) were selected to investigate fungi-induced effects on mineral dissolution. The availability of a melanin-deficient mutant (ΔKppks) of K. petricola A95, that produced more extracellular polymeric substances (EPS) than the wild type (WT), enabled comparative studies of the role of melanin and EPS in weathering processes. Three experimental systems, which generate long-term microbiological stability, were developed to study the impact of the WT and ΔKppks on olivine weathering: (1) batch and (2) mixed flow dissolution experiments, and (3) biofilm cultivation experiments. In addition, state-of-the-art analytical techniques were used to monitor changes in the growth medium, as well as of the mineral surface and biofilm-mineral interface. Inductively coupled plasma optical emission spectrometry (ICP-OES) analysis of the Mg, Si and Fe concentrations in the reacted growth medium was used to quantify olivine dissolution. In abiotic controls, Mg and Si dissolved congruently, while Fe precipitated. The measured olivine dissolution rates at pH 6 were two orders of magnitude lower than previously reported, but similar at acidic pH. X-ray photoelectron spectroscopy (XPS) analyses of the olivine surface confirmed the presence of Fe (oxyhydr)oxide precipitates. Transmission electron microscopy (TEM) imaging of an abiotically reacted polished olivine section from the long-term cultivation experiment showed the presence of an amorphous layer enriched in Fe. All these observations indicate that the precipitation of Fe (oxyhydr)oxides on the olivine surface inhibits olivine dissolution. Both tested rock-inhabiting fungal strains affect Fe precipitation as well as olivine dissolution. Evaluation of the WT and ΔKppks revealed that the WT formed less biomass but could take up higher amounts of metals (e.g. Fe) and was more efficient in its attachment to olivine. The WT and ΔKppks enhanced olivine dissolution as demonstrated by higher Mg and Si concentration in the reacted growth medium. They furthermore prevented Fe precipitation by binding Fe and retaining it in solution, thereby allowing olivine dissolution to proceed. The WT cells that were attached to the olivine surface were particularly efficient at inhibiting Fe precipitation. By binding Fe directly at the olivine surface, the WT cells removed the inhibition of olivine dissolution almost completely. TEM analysis of polished olivine sections, colonised by a fungal biofilm for seven months, supported this hypothesis. After long-term fungus-olivine interaction, the Fe-enriched, amorphous layer did not develop, and the olivine surface was stronger etched compared to the abiotic control. To study the effect of mutualism on mineral weathering, K. petricola was grown with the cyanobacterium, Nostoc punctiforme ATCC 29133. Both partners showed an enhanced growth and formed a stratified biofilm which attached more strongly to olivine. Nevertheless, the olivine dissolution rate of the fungus-cyanobacterium consortium was moderate. Rock weathering simulation systems developed here are promising research instruments. The experimental conditions allow for the alteration of the studied mineral surface, while the clear definition of these conditions delivers a stable growth of microorganisms. The latter makes these systems universally applicable, especially in combination with integrative multidisciplinary analytics. Processes underlying environmental and biological effects on rock weathering, metal corrosion, plastic degradation, or the deterioration of any other substrate can be studied reproducibly and over a long period of time. The chemical and biological complexity of these simulation systems mimics natural rock weathering processes. The mineral dissolution rates generated in this study are therefore relevant to natural ecosystems. KW - Olivine KW - Weathering KW - Fungus PY - 2019 UR - https://nbn-resolving.org/urn:nbn:de:kobv:188-refubium-25125-1 DO - https://doi.org/10.17169/refubium-2880 SP - 1 EP - 178 PB - Freie Universität Berlin CY - Berlin AN - OPUS4-48825 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - C., Ruibal A1 - L., Selbmann A1 - Serap, Avci A1 - Martin-Sanchez, Pedro Maria A1 - Gorbushina, Anna ED - Gorbushina, Anna T1 - Roof-Inhabiting Cousins of Rock-Inhabiting Fungi: Novel Melanized Microcolonial Fungal Species from Photocatalytically Reactive Subaerial Surfaces N2 - Subaerial biofilms (SAB) are an important factor in weathering, biofouling, and biodeterioration of bare rocks, building materials, and solar panel surfaces. The realm of SAB is continually widened by modern materials, and the settlers on these exposed solid surfaces always include melanized, stress-tolerant microcolonial ascomycetes. After their first discovery on desert rock surfaces, these melanized chaetothyrialean and dothidealean ascomycetes have been found on Mediterranean monuments after biocidal treatments, Antarctic rocks and solar panels. New man-made modifications of surfaces (e.g., treatment with biocides or photocatalytically active layers) accommodate the exceptional stress-tolerance of microcolonial fungi and thus further select for this well-protected ecological group. Melanized fungal strains were isolated from a microbial community that developed on highly photocatalytic roof tiles after a long-term environmental exposure in a maritime-influenced region in northwestern Germany. Four of the isolated strains are described here as a novel species, Constantinomyces oldenburgensis, based on multilocus ITS, LSU, RPB2 gene phylogeny. Their closest relative is a still-unnamed rock-inhabiting strain TRN431, here described as C. patonensis. Both species cluster in Capnodiales, among typical melanized microcolonial rock fungi from different stress habitats, including Antarctica. These novel strains flourish in hostile conditions of highly oxidizing material surfaces, and shall be used in reference procedures in material testing. KW - Microcolonial fungi KW - Multilocus phylogeny KW - Photocatalytic surfaces KW - Subaerial biofilms KW - Stress tolerance KW - Constantinomyces PY - 2018 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-455182 DO - https://doi.org/10.3390/life8030030 VL - 8 IS - 3 SP - 30 EP - 44 PB - MDPI CY - Basel, Schweiz AN - OPUS4-45518 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -