TY - GEN A1 - Naik, Aakash A1 - Ertural, Christina A1 - Dhamrait, Nidal A1 - Benner, Philipp A1 - George, Janine T1 - Quantum-Chemical Bonding Database (Unprocessed data : Part 8) N2 - This data is associated with the manuscript "A Quantum-Chemical Bonding Database for Solid-State Materials." Refer to mpids.txt to see data related to which compounds are available in the tar file. (mp-xxx refer to Materials Project ID) KW - Bonding analysis KW - Automation KW - Materials Informatics KW - Computational Chemistry KW - Database PY - 2023 DO - https://doi.org/10.5281/zenodo.7852823 PB - Zenodo CY - Geneva AN - OPUS4-57448 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bustamante, Joana A1 - Naik, Aakash A1 - Ertural, Christina A1 - Ueltzen, Katharina A1 - George, Janine T1 - Thermodynamic and Thermoelectric Properties of the Canfieldite, (Ag8SnS6 ), in the Quasi-Harmonic Approximation N2 - Argyrodite-type materials have lately sparked a lot of research interest due to their thermoelectric properties.One promising candidate is canfieldite (Ag8SnS6), which has a Pna21 orthorhombic crystal structure at room temperature (RT). Recently, a new low-temperature (LT) phase transition of canfieldite at 120K has been found. Here, we investigate structural, vibrational and thermodynamic properties of Ag8SnS6 at room- and low-temperature employing density functional theory (DFT) and lattice dynamics computations. Thermal properties calculations were based on the quasi-harmonic approximation (QHA) as implemented in phonopy. We achieve good agreement with experiments. Thermal properties such as the constant-pressure heat capacity (Cp) and thermal conductivity are very close to experimental measurements. Furthermore, we compared RT and LT Ag8SnS6 Grüneisen parameters with argyrodites analogues, Ag8XS6 (X = Sn, Si, Ge), to arrive at an improved T2 - 16th International conference on materials chemistry (MC16) CY - Dublin, Ireland DA - 03.07.2023 KW - Thermoelectric materials KW - DFT KW - QHA KW - Grüneisen parameter PY - 2023 AN - OPUS4-57887 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Amariamir, Sasan A1 - Benner, Philipp A1 - George, Janine T1 - Prediction of materials synthesizability N2 - In the pursuit of discovering materials with desirable properties, extending the available material libraries is crucial. High-throughput simulations have become an integral part in designing new materials in the past decades. However, there is no straightforward way of distinguishing synthesizable materials from all the proposed candidates. This project focuses on employing AI-driven methods to estimate synthesizability of materials. Up to now, material scientists and engineers have relied on domain knowledge as well as empirical heuristics to guess the stability and synthesizability of molecules and crystals. The famous Pauling rules of crystal stability are an example of such heuristics. However, after the accelerating material discovery in all the years since Pauling, these rules now fail to account for the stability of most known crystals. A new predictive set of heuristics for crystal stability/synthesizability is unlikely to be uncovered by human perception, given the magnitude and dimensionality of crystallographic data. Hence, a data-driven approach should be proposed to find a predictive model or set of heuristics which differentiate synthesizable crystal structures from the rest. The main challenge of this research problem is the lack of a negative set for classification. Here, there are two classes of data: the positive class which contains synthesizable materials and the negative class which contains materials which are not synthesizable. While the data from the positive class is simply the data of crystals which have been experimentally synthesized, we do not have access to data points which are certainly unsynthesizable. Strictly speaking, if an attempt of synthesizing a crystal fails, it does not necessarily follow that the crystal is not synthesizable. Also, there is no database available which contains the intended crystal structures of unsuccessful synthesis attempts. This project proposes a semi-supervised learning scheme to predict crystal synthesizability. The ML model is trained on experimental and theoretical crystal data. The initial featurization focuses on local environments which is inspired by the Pauling Rules. The experimental data points are downloaded through the Pymatgen API from the Materials Project database which contains relaxed structures recorded in Inorganic Crystal Structure Database – ICSD. The theoretical data is queried from select databases accessible through the Optimade project’s API. T2 - MSE Congress 2022 CY - Darmstadt, Germany DA - 27.09.2022 KW - Synthesizability KW - PU Learning KW - Cheminformatics PY - 2022 AN - OPUS4-56731 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Pauw, Brian Richard A1 - Laskina, Sofya A1 - Naik, Aakash A1 - Smales, Glen Jacob A1 - George, Janine A1 - Breßler, Ingo A1 - Benner, Philipp T1 - "Ultima Ratio": Simulating wide-range X-ray scattering and diffraction N2 - We demonstrate a strategy for simulating wide-range X-ray scattering patterns, which spans the small- and wide scattering angles as well as the scattering angles typically used for Pair Distribution Function (PDF) analysis. Such simulated patterns can be used to test holistic analysis models, and, since the diffraction intensity is on the same scale as the scattering intensity, may offer a novel pathway for determining the degree of crystallinity. The "Ultima Ratio" strategy is demonstrated on a 64-nm Metal Organic Framework (MOF) particle, calculated from Q < 0.01 1/nm up to Q < 150 1/nm, with a resolution of 0.16 Angstrom. The computations exploit a modified 3D Fast Fourier Transform (3D-FFT), whose modifications enable the transformations of matrices at least up to 8000^3 voxels in size. Multiple of these modified 3D-FFTs are combined to improve the low-Q behaviour. The resulting curve is compared to a wide-range scattering pattern measured on a polydisperse MOF powder. While computationally intensive, the approach is expected to be useful for simulating scattering from a wide range of realistic, complex structures, from (poly-)crystalline particles to hierarchical, multicomponent structures such as viruses and catalysts. KW - X-ray KW - Simulation KW - 3D Fourier Transform KW - High resolution KW - XRD KW - SAXS KW - PDF KW - Total scattering KW - X-ray scattering KW - Metal organic framework KW - Electron density map KW - FFT PY - 2023 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-572067 DO - https://doi.org/10.48550/arXiv.2303.13435 VL - Cornell University SP - 1 EP - 12 PB - Ithaca, NY AN - OPUS4-57206 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - George, Janine A1 - Naik, Aakash A1 - Ueltzen, Katharina T1 - Reflections from the 2024 Large Language Model (LLM) Hackathon for Applications in Materials Science and Chemistry N2 - Here, we present the outcomes from the second Large Language Model (LLM) Hackathon for Applications in Materials Science and Chemistry, which engaged participants across global hybrid locations, resulting in 34 team submissions. The submissions spanned seven key application areas and demonstrated the diverse utility of LLMs for applications in (1) molecular and material property prediction; (2) molecular and material design; (3) automation and novel interfaces; (4) scientific communication and education; (5) research data management and automation; (6) hypothesis generation and evaluation; and (7) knowledge extraction and reasoning from scientific literature. Each team submission is presented in a summary table with links to the code and as brief papers in the appendix. Beyond team results, we discuss the hackathon event and its hybrid format, which included physical hubs in Toronto, Montreal, San Francisco, Berlin, Lausanne, and Tokyo, alongside a global online hub to enable local and virtual collaboration. Overall, the event highlighted significant improvements in LLM capabilities since the previous year's hackathon, suggesting continued expansion of LLMs for applications in materials science and chemistry research. These outcomes demonstrate the dual utility of LLMs as both multipurpose models for diverse machine learning tasks and platforms for rapid prototyping custom applications in scientific research. KW - Large Language Models KW - Materials Design KW - Materials Properties KW - Phonons KW - Bonding Analysis KW - Machine Learning PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-622113 DO - https://doi.org/10.48550/arXiv.2411.15221 SP - 1 EP - 98 AN - OPUS4-62211 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Zimmermann, Yoel A1 - Bazgir, Adib A1 - Al-Feghali, Alexander A1 - Ansari, Mehrad A1 - Bocarsly, Joshua A1 - Brinson, L. Catherine A1 - Chiang, Yuan A1 - Circi, Defne A1 - Chiu, Min-Hsueh A1 - Daelman, Nathan A1 - Evans, Matthew L. A1 - Gangan, Abhijeet S. A1 - George, Janine A1 - Harb, Hassan A1 - Khalighinejad, Ghazal A1 - Khan, Sartaaj Takrim A1 - Klawohn, Sascha A1 - Lederbauer, Magdalena A1 - Mahjoubi, Soroush A1 - Mohr, Bernadette A1 - Moosavi, Seyed Mohamad A1 - Naik, Aakash A1 - Ozhan, Aleyna Beste A1 - Plessers, Dieter A1 - Roy, Aritra A1 - Schöppach, Fabian A1 - Schwaller, Philippe A1 - Terboven, Carla A1 - Ueltzen, Katharina A1 - Wu, Yue A1 - Zhu, Shang A1 - Janssen, Jan A1 - Li, Calvin A1 - Foster, Ian A1 - Blaiszik, Ben T1 - 34 Examples of LLM Applications in Materials Science and Chemistry: Towards Automation, Assistants, Agents, and Accelerated Scientific Discovery N2 - Large Language Models (LLMs) are reshaping many aspects of materials science and chemistry research, enabling advances in molecular property prediction, materials design, scientific automation, knowledge extraction, and more. Recent developments demonstrate that the latest class of models are able to integrate structured and unstructured data, assist in hypothesis generation, and streamline research workflows. To explore the frontier of LLM capabilities across the research lifecycle, we review applications of LLMs through 34 total projects developed during the second annual Large Language Model Hackathon for Applications in Materials Science and Chemistry, a global hybrid event. These projects spanned seven key research areas: (1) molecular and material property prediction, (2) molecular and material design, (3) automation and novel interfaces, (4) scientific communication and education, (5) research data management and automation, (6) hypothesis generation and evaluation, and (7) knowledge extraction and reasoning from the scientific literature. Collectively, these applications illustrate how LLMs serve as versatile predictive models, platforms for rapid prototyping of domain-specific tools, and much more. In particular, improvements in both open source and proprietary LLM performance through the addition of reasoning, additional training data, and new techniques have expanded effectiveness, particularly in low-data environments and interdisciplinary research. As LLMs continue to improve, their integration into scientific workflows presents both new opportunities and new challenges, requiring ongoing exploration, continued refinement, and further research to address reliability, interpretability, and reproducibility. KW - Automation KW - LLM KW - Machine Learning KW - Agent KW - Bonding Analysis KW - Materials Searches KW - Finetuning PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-631720 DO - https://doi.org/10.48550/arXiv.2505.03049 SP - 1 EP - 33 AN - OPUS4-63172 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Liu, Yuanbin A1 - Morrow, Joe D. A1 - Ertural, Christina A1 - Fragapane, Natascia L. A1 - Gardner, John L. A. A1 - Naik, Aakash A1 - Zhou, Yuxing A1 - George, Janine A1 - Deringer, Volker L. T1 - An automated framework for exploring and learning potential-energy surfaces N2 - Machine learning has become ubiquitous in materials modelling and now routinely enables large-scale atomistic simulations with quantum-mechanical accuracy. However, developing machine-learned interatomic potentials requires high-quality training data, and the manual generation and curation of such data can be a major bottleneck. Here, we introduce an automated framework for the exploration and fitting of potential-energy surfaces, implemented in an openly available software package that we call autoplex ('automatic potential-landscape explorer'). We discuss design choices, particularly the interoperability with existing software architectures, and the ability for the end user to easily use the computational workflows provided. We show wide-ranging capability demonstrations: for the titanium-oxygen system, SiO2, crystalline and liquid water, as well as phase-change memory materials. More generally, our study illustrates how automation can speed up atomistic machine learning -- with a long-term vision of making it a genuine mainstream tool in physics, chemistry, and materials science. KW - Machine learned interatomic potentials KW - Ab initio KW - DFT KW - Automation KW - Workflows KW - Machine learning KW - Materials design KW - Materials discovery PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-623188 DO - https://doi.org/10.48550/arXiv.2412.16736 SN - 2331-8422 SP - 1 EP - 27 PB - Cornell University CY - Ithaca, NY AN - OPUS4-62318 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Rosen, Andrew S. A1 - Gallant, Max A1 - George, Janine A1 - Riebesell, Janosh A1 - Sahasrabuddhe, Hrushikesh A1 - Shen, Jimmy-Xuan A1 - Wen, Mingjian A1 - Evans, Matthew L. A1 - Petretto, Guido A1 - Waroquiers, David A1 - Rignanese, Gian-Marco A1 - Persson, Kristin A. A1 - Jain, Anubhav A1 - Ganose, Alex M. T1 - Jobflow: Computational Workflows Made Simple N2 - We present Jobflow, a domain-agnostic Python package for writing computational workflows tailored for high-throughput computing applications. With its simple decorator-based approach, functions and class methods can be transformed into compute jobs that can be stitched together into complex workflows. Jobflow fully supports dynamic workflows where the full acyclic graph of compute jobs is not known until runtime, such as compute jobs that launch other jobs based on the results of previous steps in the workflow. The results of all Jobflow compute jobs can be easily stored in a variety of filesystem- and cloud-based databases without the data storage process being part of the underlying workflow logic itself. Jobflow has been intentionally designed to be fully independent of the choice of workflow manager used to dispatch the calculations on remote computing resources. At the time of writing, Jobflow workflows can be executed either locally or across distributed compute environments via an adapter to the FireWorks package, and Jobflow fully supports the integration of additional workflow execution adapters in the future. KW - Automation KW - Workflow KW - Computational Materials Science KW - Computations KW - Software PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-593104 DO - https://doi.org/10.21105/joss.05995 VL - 9 IS - 93 SP - 1 EP - 7 PB - The Open Journal AN - OPUS4-59310 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Amariamir, Sasan A1 - George, Janine A1 - Benner, Philipp T1 - SynCoTrain: A Dual Classifier PU-learning Framework for Synthesizability Prediction N2 - Material discovery is a cornerstone of modern science, driving advancements in diverse disciplines from biomedical technology to climate solutions. Predicting synthesizability, a critical factor in realizing novel materials, remains a complex challenge due to the limitations of traditional heuristics and thermodynamic proxies. While stability metrics such as formation energy offer partial insights, they fail to account for kinetic factors and technological constraints that influence synthesis outcomes. These challenges are further compounded by the scarcity of negative data, as failed synthesis attempts are often unpublished or context-specific. We present SynCoTrain, a semi-supervised machine learning model designed to predict the synthesizability of materials. SynCoTrain employs a co-training framework leveraging two complementary graph convolutional neural networks: SchNet and ALIGNN. By iteratively exchanging predictions between classifiers, SynCoTrain mitigates model bias and enhances generalizability. Our approach uses Positive and Unlabeled (PU) Learning to address the absence of explicit negative data, iteratively refining predictions through collaborative learning. The model demonstrates robust performance, achieving high recall on internal and leave-out test sets. By focusing on oxide crystals, a well-characterized material family with extensive experimental data, we establish SynCoTrain as a reliable tool for predicting synthesizability while balancing dataset variability and computational efficiency. This work highlights the potential of co-training to advance high-throughput materials discovery and generative research, offering a scalable solution to the challenge of synthesizability prediction. KW - Materials Design KW - Materials Discovery KW - Synthesizability KW - Machine Learning KW - Cotraining KW - New Materials KW - Materials Acceleration Platforms PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-622104 DO - https://doi.org/10.48550/arXiv.2411.12011 SP - 1 EP - 39 AN - OPUS4-62210 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Ganose, Alex A1 - Sahasrabuddhe, Hrushikesh A1 - Asta, Mark A1 - Beck, Kevin A1 - Biswas, Tathagata A1 - Bonkowski, Alexander A1 - Bustamante, Joana A1 - Chen, Xin A1 - Chiang, Yuan A1 - Chrzan, Daryl A1 - Clary, Jacob A1 - Cohen, Orion A1 - Ertural, Christina A1 - George, Janine A1 - Gallant, Max A1 - George, Janine A1 - Gerits, Sophie A1 - Goodall, Rhys A1 - Guha, Rishabh A1 - Hautier, Geoffroy A1 - Horton, Matthew A1 - Kaplan, Aaron A1 - Kingsbury, Ryan A1 - Kuner, Matthew A1 - Li, Bryant A1 - Linn, Xavier A1 - McDermott, Matthew A1 - Rohith Srinivaas Mohanakrishnan, A1 - Naik, Aakash A1 - Neaton, Jeffrey A1 - Persson, Kristin A1 - Petretto, Guido A1 - Purcell, Thomas A1 - Ricci, Francesco A1 - Rich, Benjamin A1 - Riebesell, Janosh A1 - Rignanese, Gian-Marco A1 - Rosen, Andrew A1 - Scheffler, Matthias A1 - Schmidt, Jonathan A1 - Shen, Jimmy-Xuan A1 - Sobolev, Andrei A1 - Sundararaman, Ravishankar A1 - Tezak, Cooper A1 - Trinquet, Victor A1 - Varley, Joel A1 - Vigil-Fowler, Derek A1 - Wang, Duo A1 - Waroquiers, David A1 - Wen, Mingjian A1 - Yang, Han A1 - Zheng, Hui A1 - Zheng, Jiongzhi A1 - Zhu, Zhuoying A1 - Jain, Anubhav T1 - Atomate2: Modular workflows for materials science N2 - High-throughput density functional theory (DFT) calculations have become a vital element of computational materials science, enabling materials screening, property database generation, and training of “universal” machine learning models. While several software frameworks have emerged to support these computational efforts, new developments such as machine learned force fields have increased demands for more flexible and programmable workflow solutions. This manuscript introduces atomate2, a comprehensive evolution of our original atomate framework, designed to address existing limitations in computational materials research infrastructure. Key features include the support for multiple electronic structure packages and interoperability between them, along with generalizable workflows that can be written in an abstract form irrespective of the DFT package or machine learning force field used within them. Our hope is that atomate2’s improved usability and extensibility can reduce technical barriers for high-throughput research workflows and facilitate the rapid adoption of emerging methods in computational material science. KW - Automation KW - DFT KW - Digitalisation KW - Materials design KW - Machine learning KW - Machine learned interatomic potentials PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-624487 DO - https://doi.org/10.26434/chemrxiv-2025-tcr5h SN - 2573-2293 SP - 1 EP - 66 PB - American Chemical Society (ACS) CY - Washington, D.C. AN - OPUS4-62448 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -