TY - CONF A1 - Johann, Sergej T1 - Semi-automatic Gas Measurement Device Based on Fluorescent Multi-gas Sensors N2 - This paper describes the development of a semi-automatic gas measurement device presenting potentially a broad range of applications, noteworthy in the agricultural sector. Non-reversible fluorescent molecular sensors were designed and syn-thesized. Upon, integration into a hydrogel matrix with an optimal ratio of co-solvents, the sensors reacting selectively to ammonia were illuminated by excitation light to produce a concentration-correlated fluorescence emission. An automated mechanical-elec-trical device initiates a given gas mixture and thus simulates con-centrations similar to a threshold value. The aim of this project is to develop a sensor or a low-cost method which can monitor low concentrations of harmful gases and aid in their elimination or regulation in livestock housing, barns or stables. T2 - IEEE Sensors 2019 CY - Montreal, Canada DA - 27.10.2019 KW - Gas analysis KW - Fluorescence KW - Embedded sensor KW - Spectroscopy KW - Environment KW - Agricultural economy PY - 2019 AN - OPUS4-49502 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Wang, Cui T1 - Ratiometric Nanosensors for Simultaneously “TOP” Measuring Temperature, Oxygen and pH at a Single Excitation Wavelength N2 - In summary, by combining the NIR-emissive [Cr(ddpd)2][BPh4]3 complex CrBPh4 with its extremely large energy gap between the longest wavelength absorption and emission maxima with a pH-responsive fluorescein derivative (FITC) and an inert reference dye like Nile Red (NR) and 5,10,15,20tetrakis(pentafluorophenyl) porphyrin (TFPP), we developed nanosensors for simultaneously sensing temperature, O2 partial pressure, and pH. These novel TOP nanosensors (temperature, oxygen, pH) cover the biologically and physiologically relevant concentration ranges of these parameters/analytes with single wavelength excitation in PBS buffer and in a cell culture medium containing bovine serum albumin (BSA). The response of both nanosensors to all parameters is fully reversible and only minimally affected by the presence of BSA, the most common serum albumin. Moreover, comparative studies with nanosensors containing only a single type of stimuli-responsive molecule and with the respective molecular systems revealed that the different sensor components do not interfere with each other. Future research will include the testing of these nanosensors in cellular uptake studies and, after surface modification with targeted bioligands, eventually in in vivo experiments as previously done by some of us with other polystyrene nanoparticle reporters and nanosensors.46,47 Moreover, this concept of multianalyte sensing will be expanded to nanosensors derived from differently sized premanufactured biocompatible polymer particles and different stimuli-responsive dyes like fluorescent indicators for biologically and bioanalytically relevant metal ions. T2 - ISPPCC 2019 CY - Hong Kong, China DA - 14.07.2019 KW - Medical diagnostics KW - Sensor KW - Nnanoparticle KW - Nanosensor KW - Fluorescence KW - Oxygen KW - Temperature KW - Ratiometric KW - PH KW - Lifetime KW - NIR KW - Cr(III) complex KW - FITC KW - Dye KW - Environment PY - 2019 AN - OPUS4-49698 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Heck, C. A1 - Michaeli, Y. A1 - Bald, Ilko A1 - Ebenstein, Y. T1 - Analytical epigenetics: single-molecule optical detection of DNA and histone modifications N2 - The field of epigenetics describes the relationship between genotype and phenotype, by regulating gene expression without changing the canonical base sequence of DNA. It deals with molecular genomic information that is encoded by a rich repertoire of chemical modifications and molecular interactions. This regulation involves DNA, RNA and proteins that are enzymatically tagged with small molecular groups that alter their physical and chemical properties. It is now clear that epigenetic alterations are involved in development and disease, and thus, are the focus of intensive research. The ability to record epigenetic changes and quantify them in rare medical samples is critical for next generation diagnostics. Optical detection offers the ultimate single-molecule sensitivity and the potential for spectral multiplexing. Here we review recent progress in ultrasensitive optical detection of DNA and histone modifications. KW - Epigenetics KW - Fluorescence KW - SERS PY - 2019 UR - https://www.sciencedirect.com/science/article/pii/S095816691830082X DO - https://doi.org/10.1016/j.copbio.2018.09.006 SN - 0958-1669 VL - 55 SP - 151 EP - 158 PB - Elsevier AN - OPUS4-46680 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Descalzo, Ana B. A1 - Ashokkumar, Pichandi A1 - Shen, Z. A1 - Rurack, Knut T1 - On the Aggregation Behaviour and Spectroscopic Properties of Alkylated and Annelated BoronDipyrromethene (BODIPY) Dyes in Aqueous Solution N2 - The tendency of boron-dipyrromethene (BODIPY) dyes to associate in water is well known, and usually a cause for inferior fluorescence properties. Synthetic efforts to chemically improve BODIPYs’ water solubility and minimize this problem have been numerous in the past. However, a deeper understanding of the phenomena responsible for fluorescence quenching is still required. Commonly, the spectroscopic behaviour in aqueous media has been attributed to aggregate or excimer formation, with such works often centring on a single BODIPY family. Herein, we provide an integrating discussion including very diverse types of BODIPY dyes. Our studies revealed that even subtle structural changes can distinctly affect the association behaviour of the fluorophores in water, involving different photophysical processes. The palette of behaviour found ranges from unperturbed emission, to the formation of H or J aggregates and excimers, to the involvement of tightly bound, preformed excimers. These results are a first step to a more generalized understanding of spectroscopic properties vs. structure, facilitating future molecular design of BODIPYs, especially as probes for biological applications. KW - Aggregates KW - BODIPY KW - Excimers KW - Fluorescence KW - Photophysics PY - 2019 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-497771 DO - https://doi.org/10.1002/cptc.201900235 SN - 2367-0932 VL - 4 IS - 2 SP - 120 EP - 131 PB - WILEY-VCH CY - Weinheim AN - OPUS4-49777 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Liu, H. A1 - Song, W. A1 - Gröninger, Delia A1 - Zhang, L. A1 - Lu, Y. A1 - Chan, K. S. A1 - Zhou, Z. A1 - Rurack, Knut A1 - Shen, Z. T1 - Real-time monitoring of newly acidified organelles during autophagy enabled by reaction-based BODIPY dyes N2 - Real-time monitoring of newly acidified organelles during autophagy in living cells is highly desirable for a better understanding of intracellular degradative processes. Herein, we describe a reaction-based boron dipyrromethene (BODIPY) dye containing strongly electron-withdrawing diethyl 2-cyanoacrylate groups at the α-positions. The probe exhibits intense red fluorescence in acidic organelles or the acidified cytosol while negligible fluorescence in other regions of the cell. The underlying mechanism is a nucleophilic reaction at the central meso-carbon of the indacene core, resulting in the loss of π-conjugation entailed by dramatic spectroscopic changes of more than 200 nm between its colorless, non-fluorescent leuco-BODIPY form and its red and brightly emitting form. The reversible transformation between red fluorescent BODIPY and leuco-BODIPY along with negligible cytotoxicity qualifies such dyes for rapid and direct intracellular lysosome imaging and cytosolic acidosis detection simultaneously without any washing step, enabling the real-time monitoring of newly acidified organelles during autophagy. KW - Autophagy KW - BODIPY KW - Fluorescence KW - Lysosome KW - Real-time imaging PY - 2019 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-498358 UR - https://www.nature.com/articles/s42003-019-0682-1 DO - https://doi.org/10.1038/s42003-019-0682-1 SN - 23993642 VL - 2 SP - 442 PB - Nature Research CY - London AN - OPUS4-49835 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute T1 - Photoluminescence Properties of Different Types of Nanocrystals at the Ensemble and Single Emitter Level N2 - Correlating the photoluminescence (PL) properties of nanomaterials like semiconductor nanocrystals (QDs) and upconversion nanocrystals (UCNPs) assessed in ensemble studies and at the single particle level is increasingly relevant for applications of these nanomaterials in the life sciences like bioimaging studies or their use as reporters in microfluidic assays. Here we present a comparison of the spectroscopic properties of ensembles and single emitters for QDs like II/VI QDs and cadmium-free AIS/ZnS QDs as well as different UCNPs. The overall goal of this study was to derive particle architectures well suited for spectroscopic and microscopic applications. T2 - BIOSSPIE CY - San Francisco, CA, USA DA - 02.02.2019 KW - Quantum yield KW - Nanomaterial KW - Photoluminescence KW - Absolute fluorometry KW - Integrating sphere spectroscopy, KW - NIR KW - IR KW - Fluorescence KW - Nanoparticle KW - Semiconductor KW - Quantum dot KW - Single particle spectroscopy KW - Surface chemistry PY - 2019 AN - OPUS4-47358 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute T1 - Relative and Absolute Methods for Measuring Photoluminescence Quantum Yields of UV/vis/NIR Emitters N2 - One of the key spectroscopic performance parameters of molecular and particulate emitters is the photoluminescence quantum yield (PL QY) that provides a direct measure for the number of emitted per absorbed photons. This triggered the interest in methods suitable for measuring this property for emitters in various environments in the UV/vis/NIR and above 1000 nm as well as on the ensemble and single emitter level. Moreover, for nonlinear emitters like lanthanide-based upconversion nanocrystals methods including instrumentation for power density-dependent PL QY studies are required. An overview of the research activities in Division Biophotonics of BAM is given and suitable relative and absolute methods for the deter-mination of PL QY of organic dyes and different types of application-relevant nanomaterials in dispersion and in the solid state are presen-ted. This covers also the design and calibration of integrating sphere setups, achievable uncertainties, and candidates for PL QY reference materials. T2 - OSRAM Veranstaltung CY - Regensburg, Germany DA - 09.01.2019 KW - Quantum yield KW - Calibration KW - Reference material KW - Uncertainty KW - Absolute fluorometry KW - Integrating sphere spectroscopy KW - NIR KW - IR KW - Fluorescence KW - Nanoparticle KW - Dye PY - 2019 AN - OPUS4-47263 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Martynenko, Irina V. A1 - Kusic, Dragana A1 - Weigert, Florian A1 - Stafford, S. A1 - Donnelly, F. C. A1 - Evstigneev, R. A1 - Gromova, Y. A1 - Baranov, A. V. A1 - Rühl, Bastian A1 - Kunte, Hans-Jörg A1 - Gun'ko, Y. K. A1 - Resch-Genger, Ute T1 - Magneto-fluorescent microbeads for bacteria detection constructed from superparamagnetic Fe3O4 nanoparticles and AIS/ZnS quantum dots N2 - The efficient and sensitive detection of pathogenic microorganisms in aqueous environments, such as water used in medical applications, drinking water, and cooling water of industrial plants, requires simple and fast methods suitable for multiplexed detection such as flow cytometry (FCM) with optically encoded carrier beads. For this purpose, we combine fluorescent Cd-free Ag−In−S ternary quantum dots (t-QDs) with fluorescence Lifetimes (LTs) of several hundred nanoseconds and superparamagnetic Fe3O4 nanoparticles (SPIONs) with mesoporous CaCO3 microbeads to a magneto-fluorescent bead platform that can be surface-functionalized with bioligands, such as antibodies. This inorganic bead platform enables immuno-magnetic separation, target enrichment, and target quantification with optical readout. The beads can be detected with steady-state and time-resolved fluorescence microscopy and flow cytometry (FCM). Moreover, they are suited for readout by time gated emission. In the following, the preparation of these magneto-fluorescent CaCO3 beads, their spectroscopic and analytic characterization, and their conjugation with bacteria-specific antibodies are presented as well as proof-of-concept measurements with Legionella pneumophila including cell cultivation and plating experiments for bacteria quantification. Additionally, the possibility to discriminate between the long-lived emission of the LT-encoded capture and carrier CaCO3 beads and the short-lived Emission of the dye-stained bacteria with time-resolved fluorescence techniques and single wavelength excitation is demonstrated. KW - Fluorescence KW - method KW - lifetime KW - quantum yield KW - particle KW - magnetic nanoparticle KW - immunoseparation KW - flow cytometry KW - fluorescence microscopy KW - nanoparticle KW - quantum dot KW - AIS QD KW - fluorescence KW - bacteria detection KW - bacteria KW - antibody KW - Legionella KW - screening tes KW - FLIM PY - 2019 DO - https://doi.org/10.1021/acs.analchem.9b01812 SN - 0003-2700 SN - 1520-6882 VL - 91 SP - 12661 EP - 12669 PB - American Chemical Society CY - Washington, DC AN - OPUS4-50117 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauli, Jutta T1 - Determination of the Uncertainty Budgets of the Fluorescence Quantum Yield Values of Certified Standards as New Optical Reference Materials N2 - Luminescence techniques are amongst the most commonly used analytical methods in the life and material sciences due to their high sensitivity and their nondestructive and multiparametric character. Photoluminescence signals are, however, affected by wavelength-, polarization- and time-dependent instrument specific effects. This hampers the comparability of fluorescence measurements and calls for simple tools for instrument characterization and the quantification of measured fluorescence intensities. Well characterized fluorescence standards for instrument calibration and performance validation (IPV) can be used also to reference fluorescence signals. Of special importance is the reliable and accurate determination of photoluminescence quantum yields (Ф f), that equals the number of emitted per absorbed photons and presents the key performance parameter for emitter efficiency and the comparison of different luminophores. The determination of Ф f is typically done with the aid of so-called quantum yield standards with well-known Ф f values. These standards can also be applied to evaluate integrating sphere setups, which are increasingly being used for absolute measurements of Ф f values. In this respect, division biophotonics of BAM has certificated a set of Ф f standards, which absorb and fluorescence in the wavelength range from 350 to 1100 nm. In the following, the route to Ф f standards with reliable and traceable Ф f values with a complete uncertainty budget will be presented. T2 - Eurachem-Workshop „Uncertainty from sampling and analysis for accredited laboratories CY - Berlin, Germany DA - 19.11.2019 KW - Uncertainty KW - Fluorescence KW - Quantum yield standard KW - Reference Material PY - 2019 AN - OPUS4-49661 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Kulow, Anicó T1 - X-ray fluorescence imaging with coded apertures N2 - We developed a new method for full field X-ray fluorescence imaging at the BAMline @ BESSY II. We combined an energy dispersive array detector for X-rays with a coded aperture to get high resolution images. In coded aperture imaging, an object is projected through a mask, producing many overlapping images on the detector. To get the information about the investigated object out of the projected image, a decoding step is necessary. The first part of our project was to develop the decoding algorithms. We tested the reported reconstruction with an antimask and compared the results with the performance of self-written reconstruction programs based on an iterative and a genetic algorithm. First tests were performed with raytracing simulations. The next step was the collection of experimental data at the BAMline @ BESSY II (HZB). A test objects could be successfully reconstructed with our newly developed algorithm. T2 - PRORA 2019 CY - Berlin, Germany DA - 28.11.2019 KW - X-ray KW - Imaging KW - Fluorescence KW - Coded apertures PY - 2019 AN - OPUS4-49963 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -