TY - JOUR A1 - Shipov, A. A1 - Zaslansky, P. A1 - Riesemeier, Heinrich A1 - Segev, G. A1 - Atkins, A. A1 - Kalish-Achrai, N. A1 - Weiner, S. A1 - Shahar, R. T1 - The influence of estrogen deficiency on the structural and mechanical properties of rat cortical bone N2 - Background. Post-menopausal osteoporosis is a common health problem worldwide, most commonly caused by estrogen deficiency. Most of the information regarding the skeletal effects of this disease relates to trabecular bone, while cortical bone is less studied. The purpose of this study was to evaluate the influence of estrogen deficiency on the structure and mechanical properties of cortical bone. Methods. Eight ovariectomized (OVH) and eight intact (control) Sprague Dawley rats were used. Structural features of femoral cortical bone were studied by light microscopy, scanning electron microscopy and synchrotron-based microcomputer-tomography and their mechanical properties determined by nano-indentation. Results. Cortical bone of both study groups contains two distinct regions: organized circumferential lamellae and disordered bone with highly mineralized cartilaginous islands. Lacunar volume was lower in the OVH group both in the lamellar and disorganized regions (182 ± 75 µm3 vs 232 ± 106 µm3 , P < 0.001 and 195 ± 86 µm3 vs. 247 ± 106 µm3 , P < 0.001, respectively). Lacunar density was also lower in both bone regions of the OVH group (40 ± 18 ×103 lacunae/mm3 vs. 47 ± 9×103 lacunae/mm3 in the lamellar region, P = 0.003 and 63 ± 18×103 lacunae/mm3 vs. 75 ± 13×103 lacunae/mm3 in the disorganized region, P < 0.001). Vascular canal volume was lower in the disorganized region of the bone in the OVH group compared to the same Region in the control group (P < 0.001). Indentation moduli were not different between the study groups in both bone regions. Discussion. Changes to cortical bone associated with estrogen deficiency in rats require high-resolution methods for detection. Caution is required in the application of These results to humans due to major structural differences between human and rat bone. KW - Estrogen KW - Disorganized bone KW - Rat KW - Lacunae KW - Ovariectomy PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-520798 DO - https://doi.org/10.7717/peerj.10213 VL - 9 SP - e10213 AN - OPUS4-52079 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Anzt, H. A1 - Bach, F. A1 - Druskat, S. A1 - Löffler, F. A1 - Loewe, A. A1 - Renard, B. Y. A1 - Seemann, G. A1 - Struck, A. A1 - Achhammer, E. A1 - Aggarwal, P. A1 - Appel, F. A1 - Bader, M. A1 - Brusch, L. A1 - Busse, C. A1 - Chourdakis, G. A1 - Dabrowski, P. W. A1 - Ebert, P. A1 - Flemisch, B. A1 - Friedl, S. A1 - Fritzsch, B. A1 - Funk, M. D. A1 - Gast, V. A1 - Goth, F. A1 - Grad, J. A1 - Hegewald, J. A1 - Hermann, S. A1 - Hohmann, F. A1 - Janosch, S. A1 - Kutra, D. A1 - Linxweiler, J. A1 - Muth, Thilo A1 - Peters-Kottig, W. A1 - Rack, F. A1 - Raters, F. H. C. A1 - Rave, S. A1 - Reina, G. A1 - Reißig, M. A1 - Ropinski, T. A1 - Schaarschmidt, J. A1 - Seibold, H. A1 - Thiele, J. P. A1 - Uekermann, B. A1 - Unger, S. A1 - Weeber, R. T1 - An environment for sustainable research software in Germany and beyond: current state, open challenges, and call for action N2 - Research software has become a central asset in academic research. It optimizes existing and enables new research methods, implements and embeds research knowledge, and constitutes an essential research product in itself. Research software must be sustainable in order to understand, replicate, reproduce, and build upon existing research or conduct new research effectively. In other words, software must be available, discoverable, usable, and adaptable to new needs, both now and in the future. Research software therefore requires an environment that supports sustainability. Hence, a change is needed in the way research software development and maintenance are currently motivated, incentivized, funded, structurally and infrastructurally supported, and legally treated. Failing to do so will threaten the quality and validity of research. In this paper, we identify challenges for research software sustainability in Germany and beyond, in terms of motivation, selection, research software engineering personnel, funding, infrastructure, and legal aspects. Besides researchers, we specifically address political and academic decision-makers to increase awareness of the importance and needs of sustainable research software practices. In particular, we recommend strategies and measures to create an environment for sustainable research software, with the ultimate goal to ensure that software-driven research is valid, reproducible and sustainable, and that software is recognized as a first class citizen in research. This paper is the outcome of two workshops run in Germany in 2019, at deRSE19 - the first International Conference of Research Software Engineers in Germany - and a dedicated DFG-supported follow-up workshop in Berlin. KW - Research Software KW - Sustainable Software Development KW - Academic Software KW - Software Infrastructure KW - Software Training KW - Software Licensing PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-522029 DO - https://doi.org/10.12688/f1000research.23224.2 VL - 9 SP - 1 EP - 35 AN - OPUS4-52202 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Pech, S. A1 - Rehberg, M. A1 - Janke, R. A1 - Benndorf, D. A1 - Genzel, Y. A1 - Muth, Thilo A1 - Sickmann, A. A1 - Rapp, E. A1 - Reichl, U. T1 - Tracking changes in adaptation to suspension growth for MDCK cells: cell growth correlates with levels of metabolites, enzymes and proteins N2 - Adaptations of animal cells to growth in suspension culture concern in particular viral vaccine production, where very specific aspects of virus-host cell interaction need to be taken into account to achieve high cell specific yields and overall process productivity. So far, the complexity of alterations on the metabolism, enzyme, and proteome level required for adaptation is only poorly understood. In this study, for the first time, we combined several complex analytical approaches with the aim to track cellular changes on different levels and to unravel interconnections and correlations. Therefore, a Madin-Darby canine kidney (MDCK) suspension cell line, adapted earlier to growth in suspension, was cultivated in a 1-L bioreactor. Cell concentrations and cell volumes, extracellular metabolite concentrations, and intracellular enzyme activities were determined. The experimental data set was used as the input for a segregated growth model that was already applied to describe the growth dynamics of the parental adherent cell line. In addition, the cellular proteome was analyzed by liquid chromatography coupled to tandem mass spectrometry using a label-free protein quantification method to unravel altered cellular processes for the suspension and the adherent cell line. Four regulatory mechanisms were identified as a response of the adaptation of adherent MDCK cells to growth in suspension. These regulatory mechanisms were linked to the proteins caveolin, cadherin-1, and pirin. Combining cell, metabolite, enzyme, and protein measurements with mathematical modeling generated a more holistic view on cellular processes involved in the adaptation of an adherent cell line to suspension growth. KW - MDCK cell KW - Proteome KW - Metabolism KW - Enzyme activity KW - Suspension growth PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-522070 DO - https://doi.org/10.1007/s00253-021-11150-z VL - 105 IS - 5 SP - 1861 EP - 1874 PB - Springer AN - OPUS4-52207 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Horender, S. A1 - Auderset, K. A1 - Quincey, P. A1 - Seeger, Stefan A1 - Skov, S. N. A1 - Dierschel, K. A1 - Smith, T. O.M. A1 - Williams, K. A1 - Aegerter, C. C. A1 - Kalbermatter, D. M. A1 - Gaie-Levrel, F. A1 - Vasilatou, K. T1 - Facility for production of ambient-like model aerosols (PALMA) inthe laboratory: application in the intercomparison of automated PMmonitors with the reference gravimetric method N2 - A new facility has been developed which allows for a stable and reproducible production of ambient-like model aerosols (PALMA) in the laboratory. The set-up consists of multiple aerosol generators, a custom-made flow tube homogeniser, isokinetic sampling probes, and a system to control aerosol temperature and humidity. Model aerosols containing elemental carbon, secondary organic matter from the ozonolysis of α-pinene, inorganic salts such as ammonium sulfate and ammonium nitrate, mineral dust particles,and water were generated under different environmental conditions and at different number and mass concentrations. The aerosol physical and chemical properties were characterised with an array of experimental methods, including scanning mobility particle sizing, ion chromatography, total reflection X-ray fluorescence spectroscopy and thermo-optical analysis. The facility is very versatile and can find applications in the calibration and performance characterisation of aerosol instruments monitoring ambient air. In this study, we performed, as proof of concept, an intercomparison of three different commercial PM (particulate matter) monitors (TEOM1405, DustTrak DRX 8533 and Fidas Frog) with the gravimetric reference method under three simulated environmental scenarios. The results are presented and compared to previous field studies. We believe that the laboratory-based method for simulating ambient aerosols presented here could provide in the future a useful alternative to time-consuming and expensive field campaigns, which are often required for instrument certification and calibration. KW - Model aerosols KW - Intercomparison KW - PM monitors KW - Aerosol gravimetry PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-521342 DO - https://doi.org/10.5194/amt-14-1225-2021 VL - 14 IS - 2 SP - 1225 EP - 1238 PB - Copernicus Publications AN - OPUS4-52134 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Frisch, M. A1 - Laun, J. A1 - Marquardt, Julien A1 - Arinchtein, A. A1 - Bauerfeind, K. A1 - Bernsmeier, D. A1 - Bernicke, M. A1 - Bredow, T. A1 - Kraehnert, R. T1 - Bridging experiment and theory: enhancing the electrical conductivities of soft-templated niobium-doped mesoporous titania films† N2 - Theoretical calculations suggest a strong dependence of electrical conductivity and doping concentration in transition-metal doped titania. Herein, we present a combined theoretical and experimental approach for the prediction of relative phase stability and electrical conductivity in niobium-doped titania as model system. Our method paves the way towards the development of materials with improved electrical properties. KW - Electrical conductivity KW - Prediction relative KW - Transition-metal doped KW - System method PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-521371 DO - https://doi.org/10.1039/d0cp06544g SN - 1463-9084 VL - 23 IS - 5 SP - 3219 EP - 3224 PB - Royal Society of Chemistry AN - OPUS4-52137 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Schutjajew, K. A1 - Pampel, Jonas A1 - Zhang, W. A1 - Antonietti, M. A1 - Oschatz, M. T1 - Influence of pore architecture and chemical structure on the sodium storage in nitrogen‐doped hard carbons N2 - Hard carbon is the material of choice for sodium ion battery anodes. Capacities comparable to those of lithium/graphite can be reached, but the understanding of the underlying sodium storage mechanisms remains fragmentary. A two‐step process is commonly observed, where sodium first adsorbs to polar sites of the carbon (“sloping region”) and subsequently fills small voids in the material (“plateau region”). To study the impact of nitrogen functionalities and pore geometry on sodium storage, a systematic series of nitrogen‐doped hard carbons is synthesized. The nitrogen content is found to contribute to sloping capacity by binding sodium ions at edges and defects, whereas higher plateau capacities are found for materials with less nitrogen content and more extensive graphene layers, suggesting the formation of 2D sodium structures stabilized by graphene‐like pore walls. In fact, up to 84% of the plateau capacity is measured at potentials less than 0 V versus metallic Na, that is, quasimetallic sodium can be stabilized in such structure motifs. Finally, gas physisorption measurements are related to charge discharge data to identify the energy storage relevant pore architectures. Interestingly, these are pores inaccessible to probe gases and electrolytes, suggesting a new view on such “closed pores” required for efficient sodium storage. KW - Sodium Ion Batteries KW - Hard Carbon KW - Storage Mechanism KW - Anode PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-522529 DO - https://doi.org/10.1002/smll.202006767 VL - 17 IS - 48 SP - 2006767 PB - Wiley Online Library AN - OPUS4-52252 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Legall, Herbert A1 - Bonse, Jörn A1 - Krüger, Jörg T1 - Review of x-ray exposure and safety issues arising from ultra-short pulse laser material processing N2 - Laser processing with ultra-short laser pulses enables machining of materials with high accuracy and throughput. The development of novel laser Technologies with laser pulse repetition rates up to the MHz range opened the way for industrial manufacturing processes. From a radiological point of view this evolution is important, because x-ray radiation can be generated as an unwanted side effect in laser material processing. Even if the emitted x-ray dose per pulse is comparably low, the x-ray dose can become hazardous to health at high laser repetition rates. Therefore, radiation protection must be considered. This article provides an overview on the generation and detection of x-rays in laser material processing, as well as on the handling of this radiation risk in the framework of radiological protection. KW - Ultra-short pulse laser processing KW - Laser-induced x-ray emission KW - Radiation protection PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-522376 DO - https://doi.org/10.1088/1361-6498/abcb16 VL - 41 IS - 1 SP - R28 EP - R42 AN - OPUS4-52237 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Epishin, A. A1 - Camin, B. A1 - Hansen, L. A1 - Chyrkin, A. A1 - Nolze, Gert T1 - Synchrotron Sub-μ X-ray Tomography of Kirkendall Porosity in a Diffusion Couple of Nickel-Base Superalloy and Nickel after Annealing at 1250 °C N2 - Kirkendall porosity that forms during interdiffusion in a diffusion couple of nickel-base superalloy CMSX-10 with pure nickel is investigated. The diffusion experiments are conducted at a temperature of 1250 °C, where the strengthening ƴ'-phase ist partially dissolved. The porosity is studied by X-ray sub-μ tomography with a spatial resolution of about 0.35³ μm³ at the European Synchrotron Radiation Facility (ESRF) in Grenoble, France. It is found that depending on the distance from the interface the Kirkendall pores take different shapes: octahedral, rounded pyramidal, drop shaped, dendritic, pear shaped, and joint shapes. Such a variety of pore morphologies indicates a complex multistage process of porosity nucleation and growth under vacancy supersaturation of different degrees. The experimental findings are interpreted on the basis of the results of diffusion modeling. It is shown that the kinetics of porosity growth is essentially influenced by the dissolution of the ƴ'-phase. KW - Diffusion KW - Nickel alloys KW - Porous materials KW - Synchrotron radiations KW - Three-dimensional tomographies PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-521476 DO - https://doi.org/10.1002/adem.202001220 VL - 23 IS - 4 SP - 1220 PB - Wiley Online Library AN - OPUS4-52147 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Faßbender, Sebastian A1 - von der Au, Marcus A1 - Koenig, Maren A1 - Pelzer, J. A1 - Piechotta, Christian A1 - Vogl, Jochen A1 - Meermann, Björn T1 - Species-specific isotope dilution analysis of monomethylmercury in sediment using GC/ICP-ToF-MS and comparison with ICP-Q-MS and ICP-SF-MS N2 - A recently introduced inductively coupled plasma-time-of-flight-mass spectrometer (ICP-ToF-MS) shows enhanced sensitivity compared to previous developments and superior isotope ratio precision compared to other ToF and commonly used single-collector ICP-MS instruments. Following this fact, an improvement for isotope dilution ICP-MS using the new instrumentation has been reported. This study aimed at investigating whether this improvement also meets the requirements of species-specific isotope dilution using GC/ICP-MS, where short transient signals are recorded. The results of the analysis of monomethylmercury (MMHg) of a sediment reference material show that isotope ratio precision of ICP-MS instruments equipped with quadrupole, sector-field, and time-of-flight mass analyzers is similar within a broad range of peak signal-to-noise ratio when analyzing one isotopic system. The procedural limit of quantification (LOQ) for MMHg, expressed as mass fraction of Hg being present as MMHg, w(Hg)MMHg, was similar as well for all investigated instruments and ranged between 0.003 and 0.016 μg/kg. Due to the simultaneous detection capability, the ICP-ToF-MS might, however, be more favorable when several isotopic systems are analyzed within one measurement. In a case study, the GC/ICP-ToF-MS coupling was applied for analysis of MMHg in sediments of Finow Canal, a historic German canal heavily polluted with mercury. Mass fractions between 0.180 and 41 μg/kg (w(Hg)MMHg) for MMHg, and 0.056 and 126 mg/kg (w(Hg)total) for total mercury were found in sediment samples taken from the canal upstream and downstream of a former chemical plant. KW - Methylmercury KW - Legacy pollution KW - Finow Canal KW - Isotope dilution KW - Mercury speciation PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-529967 DO - https://doi.org/10.1007/s00216-021-03497-z SN - 1618-2642 VL - 413 IS - 21 SP - 5279 EP - 5289 PB - Springer CY - Berlin AN - OPUS4-52996 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Even, Morgane A1 - Hutzler, C. A1 - Wilke, Olaf A1 - Luch, A. T1 - Emissions of volatile organic compounds from polymer-based consumer products: comparison of three emission chamber sizes N2 - The ISO 16000 standard series provide guidelines for emission measurements of volatile organic compounds (VOCs) from building materials. However, polymer-based consumer products such as toys may also release harmful substances into indoor air. In such cases, the existing standard procedures are unsuitable for official control laboratories due to high costs for large emission testing chambers. This paper aims at developing and comparing alternative and more competitive methods for the emission testing of consumer products. The influence of the emission chamber size was investigated as smaller chambers are more suited to the common size of consumer products and may help to reduce the costs of testing. Comparison of the performance of a 203 l emission test chamber with two smaller chambers with the capacity of 24 l and 44 ml, respectively, was carried out by using a polyurethane reference material spiked with 14 VOCs during the course of 28 days. The area-specific emission rates obtained in the small chambers were always similar to those of the 203 l reference chamber after a few hours. This implies that smaller chambers can provide at least useful numbers on the extent of polymer-based consumer product emissions into indoor air, thereby supporting meaningful exposure assessments. KW - Comparison KW - Consumer products KW - Emission chamber KW - Reference material KW - Volatile organic compounds PY - 2020 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-493697 DO - https://doi.org/10.1111/ina.12605 VL - 30 IS - 1 SP - 40 EP - 48 PB - Wiley VCH-Verlag AN - OPUS4-49369 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hobmeier, K. A1 - Cantone, M. A1 - Nguyen, Q. A. A1 - Pflüger-Grau, K. A1 - Kremling, A. A1 - Kunte, Hans-Jörg A1 - Pfeiffer, F. A1 - Marin-Sanguino, A. T1 - Adaptation to varying salinity in Halomonas elongata: Much more than ectoine accumulation N2 - The halophilic γ-proteobacterium Halomonas elongata DSM 2581T thrives at salt concentrations well above 10 % NaCl (1.7 M NaCl). A well-known osmoregulatory mechanism is the accumulation of the compatible solute ectoine within the cell in response to osmotic stress. While ectoine accumulation is central to osmoregulation and promotes resistance to high salinity in halophilic bacteria, ectoine has this effect only to a much lesser extent in non-halophiles. We carried out transcriptome analysis of H. elongata grown on two different carbon sources (acetate or glucose), and low (0.17 M NaCl), medium (1 M), and high salinity (2 M) to identify additional mechanisms for adaptation to high saline environments. To avoid a methodological bias, the transcripts were evaluated by applying two methods, DESeq2 and Transcripts Per Million (TPM). The differentially transcribed genes in response to the available carbon sources and salt stress were then compared to the transcriptome profile of Chromohalobacter salexigens, a closely related moderate halophilic bacterium. Transcriptome profiling supports the notion that glucose is degraded via the cytoplasmic Entner-Doudoroff pathway, whereas the Embden-Meyerhoff-Parnas pathway is employed for gluconeogenesis. The machinery of oxidative phosphorylation in H. elongata and C. salexigens differs greatly from that of non-halophilic organisms, and electron flow can occur from quinone to oxygen along four alternative routes. Two of these pathways via cytochrome bo' and cytochrome bd quinol oxidases seem to be upregulated in salt stressed cells. Among the most highly regulated genes in H. elongata and C. salexigens are those encoding chemotaxis and motility proteins, with genes for chemotaxis and flagellar assembly severely downregulated at low salt concentrations. We also compared transcripts at low and high-salt stress (low growth rate) with transcripts at optimal salt concentration and found that the majority of regulated genes were down-regulated in stressed cells, including many genes involved in carbohydrate metabolism, while ribosome synthesis was up-regulated, which is in contrast to what is known from non-halophiles at slow growth. Finally, comparing the acidity of the cytoplasmic proteomes of non-halophiles, extreme halophiles and moderate halophiles suggests adaptation to an increased cytoplasmic ion concentration of H. elongata. Taken together, these results lead us to propose a model for salt tolerance in H. elongata where ion accumulation plays a greater role in salt tolerance than previously assumed. KW - Ectoine KW - Osmoadaptation PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-545608 DO - https://doi.org/10.3389/fmicb.2022.846677 SN - 1664-302X VL - 13 SP - 1 EP - 19 PB - Frontiers Media CY - Lausanne AN - OPUS4-54560 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Marklein, B. A1 - Jenning, M. A1 - Konthur, Zoltán A1 - Häupl, T. A1 - Welzel, F. A1 - Nonhoff, U. A1 - Krobitsch, S. A1 - Mulder, D. M. A1 - Koenders, M. I. A1 - Joshua, V. A1 - Cope, A. P. A1 - Shlomchik, M. J. A1 - Anders, H.-J. A1 - Burmester, G. R. A1 - Hensvold, A. A1 - Catrina, A. I. A1 - Rönnelid, J. A1 - Steiner, G. A1 - Skriner, K. T1 - The citrullinated/native index of autoantibodies against hnRNP-DL predicts an individual "window of treatment success" in RA patients N2 - Background: There is a need for biomarker to identify patients “at risk” for rheumatoid arthritis (risk-RA) and to better predict the therapeutic response and in this study we tested the hypothesis that novel native and citrullinated heterogeneous nuclear ribonucleoprotein (hnRNP)-DL autoantibodies could be possible biomarkers. Methods: Using protein macroarray and ELISA, epitope recognition against hnRNP-DL was analysed in sera from different developed RA disease and diagnosed SLE patients. Toll-like receptor (TLR) 7/9 and myeloid Differentiation primary response gene 88 (MyD88)-dependency were studied in sera from murine disease models. HnRNP-DL expression in cultivated cells and synovial tissue was analysed by indirect immunofluorescence, immunoblot and immunohistochemistry. KW - Citrullinated KW - Rheumatoid arthritis KW - Protein-modification KW - Autoantibodies KW - Antigens PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-533682 DO - https://doi.org/10.1186/s13075-021-02603-x SN - 1478-6362 VL - 23 SP - 1 EP - 16 PB - BioMed Central CY - London AN - OPUS4-53368 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Haeckel, A. A1 - Ascher, Lena A1 - Beindorff, N. A1 - Prasad, S. A1 - Garczynska, K. A1 - Guo, J. A1 - Schellenberger, E. T1 - Long‑circulating XTEN864‑annexin A5 fusion protein for phosphatidylserine‑related therapeutic applications N2 - Annexin A5 (anxA5) is a marker for apoptosis, but has also therapeutic potential in cardiovascular diseases, cancer, and, due to apoptotic mimicry, against dangerous viruses, which is limited by the short blood circulation. An 864-amino-acid XTEN polypeptide was fused to anxA5. XTEN864-anxA5 was expressed in Escherichia coli and purified using XTEN as tag. XTEN864-anxA5 was coupled with DTPA and indium-111. After intravenous or subcutaneous injection of 111In-XTEN864-anxA5, mouse blood samples were collected for blood half-life determination and organ samples for biodistribution using a gamma counter. XTEN864-anxA5 was labeled with 6S-IDCC to confirm binding to apoptotic cells using flow cytometry. To demonstrate targeting of atherosclerotic plaques, XTEN864-anxA5 was labeled with MeCAT(Ho) and administered intravenously to atherosclerotic ApoE−/−mice. MeCAT(Ho)-XTEN864-anxA5 was detected together with MeCAT(Tm)-MAC-2 macrophage antibodies by imaging mass cytometry (CyTOF) of aortic root sections. The ability of anxA5 to bind apoptotic cells was not affected by XTEN864. The blood half-life of XTEN864-anxA5 was 13 h in mice after IV injection, markedly longer than the 7-min half-life of anxA5. 96 h after injection, highest amounts of XTEN864-anxA5 were found in liver, spleen, and kidney. XTEN864-anxA5 was found to target the adventitia adjacent to atherosclerotic plaques. XTEN864-anxA5 is a long-circulating fusion protein that can be efficiently produced in E. coli and potentially circulates in humans for several days, making it a promising therapeutic drug. KW - Programmed cell death KW - LA/ICP-MS Imaging KW - Medicinal application PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-533811 DO - https://doi.org/10.1007/s10495-021-01686-w VL - 26 IS - 9-10 SP - 534 EP - 547 PB - Springer AN - OPUS4-53381 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Rieger, J. A1 - Colla, V. A1 - Matino, I. A1 - Branca, T. A. A1 - Stubbe, G. A1 - Panizza, A. A1 - Brondi, C. A1 - Falsafi, M. A1 - Hage, J. A1 - Wang, X. A1 - Voraberger, B. A1 - Fenzl, T. A1 - Masaguer, V. A1 - Faraci, E. L. A1 - di Sante, L. A1 - Cirilli, F. A1 - Loose, Florian A1 - Thaler, C. A1 - Soto, A. A1 - Frittella, P. A1 - Foglio, G. A1 - di Cecca, C. A1 - Tellaroli, M. A1 - Corbella, M. A1 - Guzzon, M. A1 - Malfa, E. A1 - Morillon, A. A1 - Algermissen, D. A1 - Peters, K. A1 - Snaet, D. T1 - Residue Valorization in the Iron and Steel Industries: Sustainable Solutions for a Cleaner and More Competitive Future Europe N2 - The steel industry is an important engine for sustainable growth, added value, and high-quality employment within the European Union. It is committed to reducing its CO2 emissions due to production by up to 50% by 2030 compared to 1990′s level by developing and upscaling the technologies required to contribute to European initiatives, such as the Circular Economy Action Plan (CEAP) and the European Green Deal (EGD). The Clean Steel Partnership (CSP, a public–private partnership), which is led by the European Steel Association (EUROFER) and the European Steel Technology Platform (ESTEP), defined technological CO2 mitigation pathways comprising carbon direct avoidance (CDA), smart carbon usage SCU), and a circular economy (CE). CE ap-proaches ensure competitiveness through increased resource efficiency and sustainability and consist of different issues, such as the valorization of steelmaking residues (dusts, slags, sludge) for internal recycling in the steelmaking process, enhanced steel recycling (scrap use), the use of secondary carbon carriers from non-steel sectors as a reducing agent and energy source in the steelmaking process chain, and CE business models (supply chain analyses). The current paper gives an overview of different technological CE approaches as obtained in a dedicated workshop called “Resi4Future—Residue valorization in iron and steel industry: sustainable solutions for a cleaner and more competitive future Europe” that was organized by ESTEP to focus on future challenges toward the final goal of industrial deployment. KW - Circular economy KW - Steelmaking residues KW - Clean steel PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-530350 DO - https://doi.org/10.3390/met11081202 VL - 11 IS - 8 SP - 1202 PB - MDPI AN - OPUS4-53035 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Mirabella, Francesca A1 - Müllner, M. A1 - Touzalin, T. A1 - Riva, M. A1 - Jakub, Z. A1 - Kraushofer, F. A1 - Schmid, M. A1 - Koper, M. T. M. A1 - Parkinson, G. S. A1 - Diebold, U. T1 - Ni-modified Fe3O4(001) surface as a simple model system for understanding the oxygen evolution reaction N2 - Electrochemical water splitting is an environmentally friendly technology to store renewable energy in the form of chemical fuels. Among the earth-abundant first-row transition metal-based catalysts, mixed Ni-Fe oxides have shown promising performance for effective and low-cost catalysis of the oxygen evolution reaction (OER) in alkaline media, but the synergistic roles of Fe and Ni cations in the OER mechanism remain unclear. In this work, we report how addition of Ni changes the reactivity of a model iron oxide catalyst, based on Ni deposited on and incorporated in a magnetite Fe3O4(001) single crystal, using a combination of surface science techniques in ultra-high vacuum such as low energy electron diffraction (LEED), x-ray photoelectron spectroscopy (XPS), low-energy ion scattering (LEIS), and scanning tunneling microscopy (STM), as well as atomic force microscopy (AFM) in air, and electrochemical Methods such as cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS) in alkaline media. A significant improvement in the OER activity is observed when the top surface presents an iron fraction among the cations in the range of 20-40%, which is in good agreement with what has been observed for powder catalysts. Furthermore, a decrease in the OER overpotential is observed following surface aging in electrolyte for three days. At higher Ni load, AFM shows the growth of a new phase attributed to an (oxy)-hydroxide phase which, according to CV measurements, does not seem to correlate with the surface activity towards OER. EIS suggests that the OER precursor species observed on the clean and Ni-modified surfaces are similar and Fe-centered, but form at lower overpotentials when the surface Fe:Ni ratio is optimized. We propose that the well-defined Fe3O4(001) surface can serve as a model System for understanding the OER mechanism and establishing the structure-reactivity relation on mixed Fe-Ni oxides. KW - OER KW - Fe-Ni oxides KW - Surface science KW - Electrochemistry KW - Water splitting PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-529231 UR - https://www.sciencedirect.com/science/article/pii/S0013468621009282?via%3Dihub DO - https://doi.org/10.1016/j.electacta.2021.138638 VL - 389 SP - 138638 PB - Elsevier Ltd. AN - OPUS4-52923 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Ahlawat, A. A1 - Seeger, Stefan A1 - Gottschalk, Martin A1 - Tuch, T. A1 - Wiedensohler, A. T1 - Observation of systematic deviations between Faraday cup aerosol electrometers for varying particle sizes and flow rates - results of the AEROMET FCAE workshop N2 - Condensation particle counters (CPCs) are widely used for the measurement of aerosol particle number concentrations in the size range from approximately 3 nm to 3 μm. For an SI-traceable calibration of the size-dependent counting efficiency, which is advisable on a regular basis and required in several applications, Faraday cup aerosol electrometers (FCAEs) are considered to be a suitable SI-traceable reference.While the volumetric aerosol inlet flowrate and the electrical current measurement in FCAEs can be related to respective SI references, inter-comparison exercises for FCAEs are still performed on a regular basis to establish reliable uncertainty budgets and to further investigate the influences of designs and operational parameters on comparability. This is strongly demanded in the international community of metrological institutes and aerosol calibration facilities around the world, which provide CPC calibrations. In the present study, the performance of FCAEs was investigated,using Ag test aerosol particles with a 30 nm particle diameter by varying the inlet flowrates from 0.5 l min−1 to 4 l min−1. From our experimental results, significant deviations were observed in FCAE currents at sample flowrates smaller than 1.5 l min−1. It is recommended that these discrepancies should be quantified before an FCAE is used for CPC calibration at low sample flowrates and small particle sizes in the sub-30 nm size range. KW - Faraday cup aerosol electrometer KW - CPC calibration KW - Inter-comparison KW - Aerosol measurement instruments PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-531315 DO - https://doi.org/10.1088/1681-7575/ac0710 SN - 1681-7575 SN - 0026-1394 VL - 58 IS - 5 SP - 1 EP - 8 PB - Institute of Physics (IOP) CY - Bristol, UK AN - OPUS4-53131 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Schwabe, M. A1 - Griep, S. A1 - Schmidtberg, H. A1 - Plarre, Rüdiger A1 - Goesmann, A. A1 - Vilcinskas, A. A1 - Vogel, H. A1 - Brinkrolf, K. T1 - Next-Generation Sequencing Analysis of the Tineola bisselliella Larval Gut Transcriptome Reveals Candidate Enzymes for Keratin Digestion N2 - The clothes moth Tineola bisselliella is one of a few insects that can digest keratin, leading to the destruction of clothing, textiles and artwork. The mechanism of keratin digestion is not yet fully understood, partly reflecting the lack of publicly available genomic and transcriptomic data. Here we present a high-quality gut transcriptome of T. bisselliella generated from larvae reared on keratin-rich and keratin-free diets. The overall transcriptome consists of 428,221 contigs that were functionally annotated and screened for candidate enzymes involved in keratin utilization. As a mechanism for keratin digestion, we identified cysteine synthases, cystathionine β-synthases and cystathionine γ-lyases. These enzymes release hydrogen sulfite, which may reduce the disulfide bonds in keratin. The dataset also included 27 differentially expressed contigs with trypsin domains, among which 20 were associated with keratin feeding. Finally, we identified seven collagenases that were upregulated on the keratin-rich diet. In addition to this enzymatic repertoire potentially involved in breaking down keratin, our analysis of poly(A)-enriched and poly(A)-depleted transcripts suggested that T. bisselliella larvae possess an unstable intestinal microbiome that may nevertheless contribute to keratin digestion KW - Insect biotechnology KW - Gene expression KW - RNA-Sequencing KW - Transcriptomics KW - Tineola bisselliella KW - Keratin PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-529902 DO - https://doi.org/10.3390/genes12081113 VL - 12 IS - 8 SP - 1113 PB - MDPI AN - OPUS4-52990 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - James, G. L. A1 - Latif, M. T. A1 - Isa, M. N. M. A1 - Bakar, M. F. A. A1 - Yusuf, N. Y. M. A1 - Broughton, William A1 - Murad, A. M. A1 - Abu Bakar, F. D. T1 - Metagenomic datasets of air samples collected during episodes of severe smoke-haze in Malaysia N2 - Transboundary emissions of smoke-haze from land and forest fires have recurred annually during the dry period (June to October, over the past few decades) in South East Asia. Hazardous air quality has been recorded in Malaysia during these episodes. Agricultural practices such as slash-and-burn of biomass and peat fires particularly in Sumatera and Kalimantan, Indonesia, have been implicated as the major causes of the haze. Past findings have shown that a diversity of microbes can thrive in air including in smoke-haze polluted air. In this study, metagenomic data were generated to reveal the diversity of microorganisms in air during days with and without haze. Air samples were collected during non-haze (2013A01) and two haze (2013A04 and 2013A05) periods in the month of June 2013. DNA was extracted from the samples, subjected to Multiple Displacement Amplification and whole genome sequencing (Next Generation Sequencing) using the HiSeq 2000 Platform. Extensive bio-informatic analyses of the raw sequence data then followed. Raw reads from these six air samples were deposited in the NCBI SRA databases under Bioproject PRJNA662021 with accession numbers SRX9087478, SRX9087479 and SRX9087480. KW - Forest fires KW - Haze Samples KW - NGS KW - Multiple Displacement Amplification PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-528973 DO - https://doi.org/10.1016/j.dib.2021.107124 SN - 2352-3409 VL - 36 SP - 107124 PB - Elsevier Inc. CY - Amsterdam, Netherlands AN - OPUS4-52897 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Völker, Christoph A1 - Firdous, R. A1 - Kruschwitz, Sabine A1 - Stephan, D. T1 - Sequential learning to accelerate discovery of alkali-activated binders N2 - Alkali-activated binders (AAB) can provide a clean alternative to conventional cement in terms of CO2 emissions. However, as yet there are no sufficiently accurate material models to effectively predict the AAB properties, thus making optimal mix design highly costly and reducing the attractiveness of such binders. This work adopts sequential learning (SL) in high-dimensional material spaces (consisting of composition and processing data) to find AABs that exhibit desired properties. The SL approach combines machine learning models and feedback from real experiments. For this purpose, 131 data points were collected from different publications. The data sources are described in detail, and the differences between the binders are discussed. The sought-after target property is the compressive strength of the binders after 28 days. The success is benchmarked in terms of the number of experiments required to find materials with the desired strength. The influence of some constraints was systematically analyzed, e.g., the possibility to parallelize the experiments, the influence of the chosen algorithm and the size of the training data set. The results show the advantage of SL, i.e., the amount of data required can potentially be reduced by at least one order of magnitude compared to traditional machine learning models, while at the same time exploiting highly complex information. This brings applications in laboratory practice within reach. KW - Alkali-activated binders KW - Machine learning KW - Sequential learning KW - Materials by design KW - Materials informatics PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-531376 DO - https://doi.org/10.1007/s10853-021-06324-z SN - 0022-2461 SN - 1573-4803 VL - 56 SP - 15859 EP - 15881 PB - Springer CY - Dordrecht AN - OPUS4-53137 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Pfennig, Anja A1 - Wolf, Marcus A1 - Kranzmann, Axel T1 - Corrosion and corrosion fatigue of steels in downhole CCS environment - A summary N2 - Static immersion tests of potential injection pipe steels 42CrMo4, X20Cr13, X46Cr13, X35CrMo4, and X5CrNiCuNb16-4 at T = 60 °C and ambient pressure, as well as p = 100 bar were performed for 700–8000 h in a CO₂-saturated synthetic aquifer environment similar to CCS sites in the Northern German Basin (NGB). Corrosion rates at 100 bar are generally lower than at ambient pressure. The main corrosion products are FeCO₃ and FeOOH with surface and local corrosion phenomena directly related to the alloy composition and microstructure. The appropriate heat treatment enhances corrosion resistance. The lifetime reduction of X46Cr13, X5CrNiCuNb16-4, and duplex stainless steel X2CrNiMoN22-5-3 in a CCS environment is demonstrated in the in situ corrosion fatigue CF experiments (axial push-pull and rotation bending load, 60 °C, brine: Stuttgart Aquifer and NGB, flowing CO₂: 30 L/h, +/- applied potential). Insulating the test setup is necessary to gain reliable data. S-N plots, micrographic-, phase-, fractographic-, and surface analysis prove that the life expectancy of X2CrNiMoN22-5-3 in the axial cyclic load to failure is clearly related to the surface finish, applied stress amplitude, and stress mode. The horizontal grain attack within corrosion pit cavities, multiple fatigue cracks, and preferable deterioration of austenitic phase mainly cause fatigue failure. The CF life range increases significantly when a protective potential is applied. KW - Steel KW - High alloyed steel KW - Corrosion KW - Corrosion fatigue KW - Carbon capture and storage PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-531391 DO - https://doi.org/10.3390/pr9040594 SN - 2227-9717 VL - 9 IS - 4 SP - 1 EP - 33 PB - MDPI CY - Basel AN - OPUS4-53139 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Tokarski, T. A1 - Nolze, Gert A1 - Winkelmann, A. A1 - Rychlowski, L. A1 - Bala, P. A1 - Cios, G. T1 - Transmission Kikuchi diffraction: The impact of the signal-to-noise ratio N2 - Signal optimization for transmission Kikuchi diffraction (TKD) measurements in the scanning electron microscope is investigated by a comparison of different sample holder designs. An optimized design is presented, which uses a metal shield to efficiently trap the electron beam after transmission through the sample. For comparison, a second holder configuration allows a significant number of the transmitted electrons to scatter back from the surface of the sample holder onto the diffraction camera screen. It is shown that the secondary interaction with the sample holder leads to a significant increase in the background level, as well as to additional noise in the final Kikuchi diffraction signal. The clean TKD signal of the optimized holder design with reduced background scattering makes it possible to use small signal changes in the range of 2% of the camera full dynamic range. As is shown by an analysis of the power spectrum, the signal-to-noise ratio in the processed Kikuchi diffraction patterns is improved by an order of magnitude. As a result, the optimized design allows an increase in pattern signal to noise ratio which may lead to increase in measurement speed and indexing reliability. KW - EBSD KW - SEM KW - Transmission Kikuchi diffraction KW - Sample holder PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-531743 DO - https://doi.org/10.1016/j.ultramic.2021.113372 SN - 0304-3991 SN - 1879-2723 VL - 230 SP - 1 EP - 8 PB - Elsevier CY - Amsterdam AN - OPUS4-53174 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Wosniok, Aleksander A1 - Krebber, Katerina T1 - Distributed fiber optic radiation sensors N2 - In this work, we present our results achieved in several research activities for development of distributed fiber optic radiation sensors using glass and polymer optical fibers. The findings show that both the measurement of the radiation-induced attenuation (RIA) along the entire sensing fiber and the accompanying change in the refractive index of the fiber core can be used for distributed radiation monitoring. T2 - safeND CY - Online meeting DA - 10.11.2021 KW - Distributed fiber optic radiation sensors KW - Radiation-induced attenuation KW - Optical fiber sensor KW - Incoherent optical frequency domain reflectometry PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-537531 DO - https://doi.org/10.5194/sand-1-15-2021 VL - 1 SP - 15 EP - 16 AN - OPUS4-53753 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -