TY - JOUR A1 - Brandenburg, E. A1 - von Berlepsch, H. A1 - Leiterer, Jork A1 - Emmerling, Franziska A1 - Koksch, B. T1 - Formation of alpha-helical nanofibers by mixing beta-structured and alpha-helical coiled coil peptides N2 - The helical coiled coil is a well-studied folding motif that can be used for the design of nanometer-sized bioinspired fibrous structures with potential applications as functional materials. A two-component system of coiled coil based model peptides is investigated, which forms, under acidic conditions, uniform, hundreds of nanometers long, and ~2.6 nm thick trimeric α-helical fibers. In the absence of the other component and under the same solvent conditions, one model peptide forms β-sheet-rich amyloid fibrils and the other forms stable trimeric α-helical coiled coils, respectively. These observations reveal that the complementary interactions driving helical folding are much stronger here than those promoting the intermolecular β-sheet formation. The results of this study are important in the context of amyloid inhibition but also open up new avenues for the design of novel fibrous peptidic materials. PY - 2012 DO - https://doi.org/10.1021/bm300882d SN - 1525-7797 VL - 13 IS - 11 SP - 3542 EP - 3551 PB - ACS Publ. CY - Washington, DC, USA AN - OPUS4-27126 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Laux, Eva-Maria A1 - Behnke, Thomas A1 - Hoffmann, Katrin A1 - Resch-Genger, Ute T1 - Keeping particles brilliant - simple methods for the determination of the dye content of fluorophore-loaded polymeric particles N2 - One of the most active research areas in the life and material sciences is the design and synthesis of fluorescent nano- and micrometre sized particles for applications e.g. as labels, sensor systems, and platforms for fluorescence assays or barcoding materials. The reliable and reproducible fabrication of such particles as well as many applications require accurate, simple, and versatile procedures for the determination of the dye content per particle which affects e.g. the brightness of these materials and their surface charge and thus, colloidal stability. Here, four fast and inexpensive spectroscopic methods for the quantification of the fluorophore content of beads are presented and compared for nanometre- and micrometre sized polystyrene particles loaded or labeled with commercial fluorophores, differing in dye class, charge, and hydrophilicity. This included the determination of the amount of incorporated dye from absorption spectra of bead suspensions, via dissolving of the polymer matrix, via extraction of the polymer matrix, and from the supernatant of the swelling solution or reaction mixture. Method validation was performed with a sulfur-containing dye and elemental analysis. Based upon this method comparison and the accomplishable uncertainties, two reliable strategies for particle characterization and bead process control are identified that can be easily extended to other materials. PY - 2012 DO - https://doi.org/10.1039/c2ay05822g SN - 1759-9660 SN - 1759-9679 VL - 4 IS - 6 SP - 1759 EP - 1768 PB - RSC Publ. CY - Cambridge AN - OPUS4-26051 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Lang, Cindy A1 - Hübert, Thomas T1 - A colour ripeness indicator for apples N2 - Ripeness and senescence of climacteric fruits are strongly related to the emission of ethylene gas. The ethylene emission of apples can be detected by a new developed ripeness indicator. This indicator is based on the reduction effect of ethylene causing colour changes in selected metal ions. The used molybdenum (Mo) chromophores change under the impact of ethylene in a colour spectrum from white/light yellow to blue because of a partial reduction of Mo(VI) to Mo(V). The sensitivity of molybdenum colour change reactions can be varied by composition and pH values (pH 1.4–pH 1.5) of used ammonium molybdate solution and thus adopted to different fruits and storage conditions. The indicator can be combined with a colour recognition sensor for quantitative measurements of colour change in the frame of the L*a*b* model. The b*-coordinate, reflecting changes from yellow to blue, and the luminance L* continuously vary with increasing ethylene emission. Results obtained with the indicator system were compared with direct determination of ethylene concentrations by gas chromatography (GC-FID). Furthermore, a descriptive sensory test was used to estimate the degree of ripeness. The indicator can be applied for ripeness gauge on single fruit or in paperboard crates. KW - Ripeness KW - Apples KW - Ethylene KW - Molybdenum blue KW - Indicator PY - 2012 DO - https://doi.org/10.1007/s11947-011-0694-4 SN - 1935-5149 SN - 1935-5130 VL - 5 IS - 8 SP - 3244 EP - 3249 PB - Springer Science + Business Media CY - New York, NY, USA AN - OPUS4-26979 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Liebner, Christian A1 - Fischer, J. A1 - Heinrich, Sebastian A1 - Lange, T. A1 - Hieronymus, Hartmut A1 - Klemm, E. T1 - Are micro reactors inherently safe? An investigation of gas phase explosion propagation limits on ethene mixtures N2 - A method for the determination of safety properties for micro reactors and micro structured components is presented. Micro structured reactors are not inherently safe but the range of safe operating conditions of micro reactors are extended since the explosion region is reduced. The λ/3 rule was demonstrated to be applicable to micro scale tubes for stoichiometric mixtures of ethane–oxygen and ethane–nitrous oxide. Furthermore first results from an investigation concerning detonation propagation through a micro reactor of non-ideal geometry are shown. Initial pressure investigated is ranging from low pressure up to 100 kPa. KW - Micro reactor KW - Explosion propagation limits KW - Chemical safety KW - Investigation method PY - 2012 DO - https://doi.org/10.1016/j.psep.2011.08.006 SN - 0957-5820 SN - 1744-3598 VL - 90 IS - 2 SP - 77 EP - 82 PB - Elsevier CY - Amsterdam AN - OPUS4-25594 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Lange, Axel A1 - Kupsch, Andreas A1 - Müller, Bernd R. A1 - Hentschel, Manfred P. T1 - Edge artefacts of radiographic images by X-ray refraction N2 - The relevance of nano sized structures and interfaces in upcoming technologies requires new non-destructive Xray techniques exploiting attenuation as well as scattering. In the course of driving the resolution and the contrast of modern radiography into micro and nano metre dimension the inevitable scattering effects require increased attention. Several radiologists interpret the observed edge artefacts simply by 'phase contrast' due to different X-ray path lengths within the sample and others refer to Fresnel scattering. The ultra small angle scattering is of high intensity and may reach the level of the primary beam. We present monochromatic synchrotron measurements on rather simply shaped objects (such as plates and cylinders) which prove clearly the dominance of refraction intensity over total reflection and coherent small angle scattering. The refraction conditions hold for angles of incidence of several degrees to the surface, but typical deflection angles range from several seconds to minutes of arc. Additionally to the concept of 'phase contrast' of the primary beam its deflection becomes the essential issue. The appropriate removal of the attenuation contribution enables the imaging of inner surfaces and interfaces by refraction scanning topography. The presented measurements of reference particles demonstrate the reliability of laboratory refraction scanners applying X-ray tubes. T2 - 18th WCNDT - World conference on nondestructive testing CY - Durban, South Africa DA - 16.04.2012 KW - X-ray refraction KW - Small angle scattering KW - Phase contrast radiography KW - Refraction topography KW - Nanostructures KW - Nanocracks PY - 2012 UR - http://www.ndt.net/article/wcndt2012/papers/274_wcndtfinal00274.pdf SN - 978-0-620-52872-6 SP - 1 EP - 11 AN - OPUS4-25836 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Mizuno, Y. A1 - Lenke, Philipp A1 - Krebber, Katerina A1 - Nakamura, K. T1 - Characterization of Brillouin gain spectra in polymer optical fibers fabricated by different manufacturers at 1.32 and 1.55 µm N2 - We characterize the Brillouin gain spectra (BGS) in perfluorinated graded-index polymer optical fibers (PFGI-POFs) at 1.32 µm and 1.55 µm. Three kinds of PFGI-POFs with the same core diameter, but which are fabricated by different manufacturers, are tested. For all the PFGI-POFs, the Stokes power measured at 1.32 µm is higher than that at 1.55 µm due to the lower propagation loss, but significant differences in Stokes power are observed among the three. Based on the measurement obtained by the optical time-domain reflectometry, we show that the actual propagation loss of the PFGI-POFs plays a crucial role in observing BGS. KW - Brillouin gain spectrum (BGS) KW - Brillouin scattering KW - Nonlinear optics KW - Polymer optical fiber (POF) PY - 2012 DO - https://doi.org/10.1109/LPT.2012.2206803 SN - 1041-1135 VL - 24 IS - 17 SP - 1496 EP - 1498 PB - IEEE CY - New York, NY, USA AN - OPUS4-26319 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Linck, Lena A1 - Kapusta, P. A1 - Resch-Genger, Ute T1 - Spectroscopic and photophysical properties of dUTP and internally DNA bound fluorophores for optimized signal detection in biological formats N2 - Efficient signal generation in DNA-based assays requires understanding of the influence of fluorophore’s interactions on the spectroscopic properties. The resulting changes in fluorescence intensity, quantum yield, emission anisotropy, and fluorescence lifetime provide straightforward tools for the study of molecular dynamics and interaction between labels and nucleic acids. Searching for bright fluorescent reporters for rolling circle amplification (RCA) as efficient signal enhancement strategy for biological formats, we investigated the spectroscopic properties of seven dyes: cyanines, rhodamines, and BODIPYs. They spectrally resemble Cy3, the most frequently used fluorophore in biodetection formats, and are measured in six samples (free dye, dye-dUTP, internally labeled ssDNA and dsDNA—single- and triple-labeled) using steady-state and time-resolved fluorometry. Special emphasis was dedicated to characterizing the nature of the interaction of these fluorophores differing in dye class, charge, and rigidity. Our results suggest dye charge and structure as main factors governing the dye’s interactions, with DY-555 and Cy3B presenting the best candidates for our envisaged signal amplification strategy. This label comparison underlines the importance of a proper understanding of structure-property relations and dye–biomolecule interactions for reporter choice and presents a road map towards the design and interpretation of experiments using these labels on DNA of known sequence. KW - DNA KW - Fluorescent dye KW - Fluorescence quantum yield KW - Cyanine KW - Rhodamine KW - Fluorescence lifetime KW - Guanosine quenching PY - 2012 DO - https://doi.org/10.1111/j.1751-1097.2012.01119.x SN - 0031-8655 SN - 1751-1097 VL - 88 IS - 4 SP - 867 EP - 875 PB - American Society for Photobiology CY - Augusta, Ga. AN - OPUS4-27080 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Krüger, Oliver A1 - Kalbe, Ute A1 - Berger, Wolfgang A1 - Nordhauß, Katja A1 - Christoph, Gabriele A1 - Walzel, Hans-Peter T1 - Comparison of batch and column tests for the elution of artificial turf system components N2 - Synthetic athletic tracks and turf areas for outdoor sporting grounds may release contaminants due to the chemical composition of some components. A primary example is that of zinc from reused scrap tires (main constituent, styrene butadiene rubber, SBR), which might be harmful to the environment. Thus, methods for the risk assessment of those materials are required. Laboratory leaching methods like batch and column tests are widely used to examine the soil–groundwater pathway. We tested several components for artificial sporting grounds with batch tests at a liquid to solid (LS) ratio of 2 L/kg and column tests with an LS up to 26.5 L/kg. We found a higher zinc release in the batch test eluates for all granules, ranging from 15% higher to 687% higher versus data from column tests for SBR granules. Accompanying parameters, especially the very high turbidity of one ethylene propylene diene monomer rubber (EPDM) or thermoplastic elastomer (TPE) eluates, reflect the stronger mechanical stress of batch testing. This indicates that batch test procedures might not be suitable for the risk assessment of synthetic sporting ground components. Column tests, on the other hand, represent field conditions more closely and allow for determination of time-dependent contaminants release. PY - 2012 DO - https://doi.org/10.1021/es301227y SN - 0013-936X SN - 1520-5851 VL - 46 IS - 24 SP - 13085 EP - 13092 PB - ACS Publ. CY - Washington, DC AN - OPUS4-27555 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Linck, Lena A1 - Reiß, E. A1 - Bier, F. A1 - Resch-Genger, Ute T1 - Direct labeling rolling circle amplification as a straightforward signal amplification technique for biodetection formats N2 - Biodetection formats, such as DNA and antibody microarrays, are valuable tools in the life sciences, but for some applications, the detection limits are insufficient. A straightforward strategy to obtain signal amplification is the rolling circle amplification (RCA), an easy, isothermal, and enzymatic nucleic acid synthesis that has already been employed successfully to increase the signal yield for several single-analyte and multiplexing assays in conjunction with hybridization probes. Here, we systematically investigated the parameters responsible for the RCA driven signal amplification with fluorescent labels, such as the type of fluorophore chosen, labeling strategy, composition of reaction solution, and number of handling steps. In labeling strategies, post-synthetic labeling via a Cy3-hybridization probe was compared to the direct incorporation of fluorescent Cy3–dUTP and DY-555–dUTP into the nascent strand during synthesis. With our direct labeling protocol, the assay's runtime and handling steps could be reduced while the signal yield was increased. These features are very attractive for many detection formats but especially for point-of-care diagnostic kits that need to be simple enough to be performed by scientifically untrained personnel. KW - Method KW - Label KW - Fluorescence KW - RCA KW - Amplification KW - Oligonucleotide KW - DNA KW - Assay KW - Fluorophore KW - Dye content KW - Surface PY - 2012 DO - https://doi.org/10.1039/c2ay05760c SN - 1759-9660 SN - 1759-9679 VL - 4 IS - 5 SP - 1215 EP - 1220 PB - RSC Publ. CY - Cambridge AN - OPUS4-25839 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Krüger, Oliver A1 - Riedel, Maren A1 - Christoph, Gabriele A1 - Kalbe, Ute A1 - Berger, Wolfgang ED - Rauch, S. ED - Morrison, G.M. T1 - Assessment of total petrol and polycyclic aromatic hydrocarbon mobility in soils using leaching tests N2 - The risk assessment of total petrol hydrocarbons (TPH) and polycyclic aromatic hydrocarbons (PAH), two of the most frequent soil and water contaminants, has to include their exposure pathways, especially the soil groundwater pathway. Threshold values have to be aquired for the amendment to the German Federal Soil Protection Contaminated Sites Ordinance. For this purpose, a batch experiment with a liquid to solid ratio (L/S) of 2 L/kg was developed. Aim of this work was to verify the robustness of this leaching procedure for TPH and PAH in different soil types against varying test conditions. Also, stir bar sorptive extraction (SBSE) was tested as alternative sample preparation of eluates for PAH analysis. KW - TPH KW - PAH KW - SBSE KW - Liquid-liquid extraction KW - Batch tests PY - 2012 SN - 978-94-007-2539-3 SN - 978-94-007-2540-9 DO - https://doi.org/10.1007/978-94-007-2540-9_36 SN - 1571-4780 N1 - Geburtsname von Riedel, Maren: Kolepki, M. - Birth name of Riedel, Maren: Kolepki, M. N1 - Serientitel: Alliance for Global Sustainability Bookseries – Series title: Alliance for Global Sustainability Bookseries VL - 19 SP - 393 EP - 402 PB - Springer AN - OPUS4-33342 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Höhm, S. A1 - Rosenfeld, A. A1 - Krüger, Jörg A1 - Bonse, Jörn T1 - Femtosecond laser-induced periodic surface structures on silica N2 - The formation of laser-induced periodic surface structures (LIPSS) on two different silica polymorphs (single-crystalline synthetic quartz and commercial fused silica glass) upon irradiation in air with multiple linearly polarized single- and double-fs-laser pulse sequences (τ = 150 fs pulse duration, λ = 800nm center wavelength, temporal pulse separation Δt < 40 ps) is studied experimentally and theoretically. Two distinct types of fs-LIPSS [so-called low-spatial-frequency LIPSS (LSFL) and high-spatial-frequency LIPSS (HSFL)] with different spatial periods and orientations were identified. Their appearance was characterized with respect to the experimental parameters peak laser fluence and number of laser pulses per spot. Additionally, the 'dynamics' of the LIPSS formation was addressed in complementary double-fs-pulse experiments with varying delays, revealing a characteristic change of the LSFL periods. The experimental results are interpreted on the basis of a Sipe-Drude model considering the carrier dependence of the optical properties of fs-laser excited silica. This new approach provides an explanation of the LSFL orientation parallel to the laser beam polarisation in silica—as opposed to the behaviour of most other materials. KW - High-speed optical techniques KW - Laser beam effects KW - Refractive index KW - Silicon compounds KW - Surface structure PY - 2012 DO - https://doi.org/10.1063/1.4730902 SN - 0021-8979 SN - 1089-7550 VL - 112 IS - 1 SP - 014901-1 - 014901-9 PB - American Institute of Physics CY - Melville, NY AN - OPUS4-26201 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -