TY - GEN A1 - Lisec, Jan T1 - CorMID - Correct Mass Isotopologue Distribution Vectors N2 - The investigation of metabolic fluxes and metabolite distributions within cells by means of tracer molecules is a valuable tool to unravel the complexity of biological systems. Technological advances in mass spectrometry (MS) technology such as atmospheric pressure chemical ionization (APCI) coupled with high resolution (HR), not only allows for highly sensitive analyses but also broadens the usefulness of tracer-based experiments, as interesting signals can be annotated de novo when not yet present in a compound library. However, several effects in the APCI ion source, i.e., fragmentation and rearrangement, lead to superimposed mass isotopologue distributions (MID) within the mass spectra, which need to be corrected during data evaluation as they will impair enrichment calculation otherwise. Here, we present and evaluate a novel software tool to automatically perform such corrections. We discuss the different effects, explain the implemented algorithm, and show its application on several experimental datasets. This adjustable tool is available as an R package from CRAN. KW - Mass Spectrometry KW - Software KW - R package KW - Mass Isotopomer Distribution KW - Flux Analysis PY - 2022 UR - https://github.com/cran/CorMID/ PB - GitHub CY - San Francisco, CA, USA AN - OPUS4-56442 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Yang, L. A1 - Vogl, Jochen A1 - Mann, J. A1 - Kraft, R. A1 - Vocke, R. A1 - Pramann, A. A1 - Eberhardt, J. A1 - Rienitz, O. A1 - Lee, K.-S. A1 - Lim, J. S. A1 - Sobina, E. A1 - Song, P. A1 - Wang, J. A1 - Mester, Z. A1 - Meija, J. T1 - Copper isotope delta measurements in high purity materials: CCQM-P213 pilot study N2 - Accurate and precise isotope ratio measurements of heavy elements are playing an increasinglyimportant role in modern analytical sciences and have numerous applications. Today, isotope ratio measurements are typically performed with two principal techniques: thermal ionization mass spectrometry (TIMS) and multiple collector-inductively coupled plasma mass spectrometry (MC-ICP-MS). To obtain accurate results by mass spectrometry, isotopic certified reference materials (iCRMs) are needed for mass bias correction and for the validation of the method used for analysis.Thus, it is of paramount importance to achieve measurement comparability of all data reported, and to assess measurement capability of each CRM producer/National Metrology Institute (NMI). Therefore, the international comparison (CCQM-P213) was performed to assess the analytical capabilities of NMIs for the accurate determination of copper isotope ratio delta values in high purity materials. The study was proposed by the coordinating laboratories, National Research Council Canada (NRC), National Institute of Standards and Technology (NIST), Bundesanstalt für Materialforschung und -prüfung (BAM) and Physikalisch-Technische Bundesanstalt (PTB), as an activity of the Isotope Ratio Working Group (IRWG) of the Consultative Committee for Amount of Substance - Metrology in Chemistry and Biology (CCQM). Participants included six NMIs and one designated institute (DI) from the six countries. Although no measurement method was prescribed by the coordinating laboratories, MC-ICP-MS with either standard-sample bracketing (SSB) or combined SSB with internal normalization (C-SSBIN) models for mass bias correction were recommended. Results obtained from the six NMIs and one DI were in good agreement. KW - Comparability KW - Traceability KW - Metrology KW - Isotope delta KW - Copper PY - 2023 DO - https://doi.org/10.1088/0026-1394/60/1A/08019 VL - 60 IS - 1A SP - 1 EP - 23 PB - IOP Science AN - OPUS4-58040 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Relling, Alexander A1 - Wegner, Karl David A1 - Niermann, L. A1 - Hodoroaba, Vasile-Dan A1 - Resch-Genger, Ute T1 - Copper doped AgInS2-ZnS QDs from a single-source-precursor N2 - Quaternary semiconductor nanocrystals like AgInS2-ZnS solid solution quantum dots (QDs) are a highly promising material for material science and biomedical applications due to their tunable photoluminescence (PL), their high quantum yields (QY), and their low cytotoxicity1. A red shift of the PL into the NIR and SWIR region could further increase their application potential. Copper doping has been proven to be a suitable approach for bathochromically shifting the PL of QDs2. The synthesis of copper doped AgInS2-ZnS QDs from a single-source-precursor should enable an easily scalable synthesis with high reproducibility. T2 - Summer School "Exciting nanostructures: characterizing advanced confined systems" CY - Bad Honnef, Germany DA - 18.07.2021 KW - Nanocrystals KW - Quantum dots KW - Doping KW - AgInS2 KW - Single-source-precursor PY - 2021 AN - OPUS4-53129 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Meyer, Klas A1 - Bornemann-Pfeiffer, Martin A1 - Lademann, J. A1 - Kraume, M. A1 - Maiwald, Michael T1 - Contributions Towards Variable Temperature Shielding for Compact NMR Instruments N2 - The application of compact NMR instruments to continuously flowing samples at higher temperatures or exothermically reacting mixtures is limited by the temperature sensitivity of permanent magnets. Typically, such temperature effects directly influence the achievable magnetic field homogeneity and hence measurement quality. The internal-temperature control loop of the magnet and instruments is typically not designed for compensation of such effects. Passive insulation is restricted by the small dimensions within the magnet borehole. Here, we present a design approach for active heat shielding with the aim of variable temperature control of NMR samples for benchtop NMR instruments using a compressed airstream which is variable in flow and temperature. Based on the system identification and surface temperature measurements using an optical thermo-graphy setup, a model predictive control was set up to minimize any disturbance effect on the permanent magnet from the probe or sample temperature. This methodology will facilitate the application of variable-temperature shielding and, therefore, potentially extend the application of compact NMR instruments to flowing samples at higher temperature than the permanent magnet. T2 - 18. Kolloquium AK Prozessanalytik CY - Krefeld, Germany DA - 27.11.2023 KW - Thermostating KW - Benchtop-NMR KW - NMR spectroscopy KW - Process Analytical Technology PY - 2023 AN - OPUS4-58970 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Meyer, Klas A1 - Bornemann-Pfeiffer, Martin A1 - Lademann, J. A1 - Kraume, M. A1 - Maiwald, Michael T1 - Contributions Towards Variable Temperature Shielding for Compact NMR Instruments N2 - The application of compact NMR instruments to hot flowing samples or exothermically reacting mixtures is limited by the temperature sensitivity of permanent magnets. Typically, such temperature effects directly influence the achievable magnetic field homogeneity and hence measurement quality. The internal-temperature control loop of the magnet and instruments is not designed for such temperature compensation. Passive insulation is restricted by the small dimensions within the magnet borehole. Here, we present a design approach for active heat shielding with the aim of variable temperature control of NMR samples for benchtop NMR instruments using a compressed airstream which is variable in flow and temperature. Based on the system identification and surface temperature measurements through thermography, a model predictive control was set up to minimise any disturbance effect on the permanent magnet from the probe or sample temperature. This methodology will facilitate the application of variable-temperature shielding and, therefore, extend the application of compact NMR instruments to flowing sample temperatures that differ from the magnet temperature. T2 - SMASH Small molecule NMR conference 2023 CY - Baveno, Italy DA - 17.09.2023 KW - Benchtop NMR KW - Temperature Control KW - Process Analytical Technology KW - Flow NMR PY - 2023 AN - OPUS4-58400 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Bierstedt, Andreas A1 - Panne, Ulrich A1 - Riedel, Jens T1 - Confinement and enhancement of an airborne atmospheric laser-induced plasma using an ultrasonic acoustic resonator N2 - Optical elemental analysis in the gas phase typically relies on electrically driven plasmas. As an alternative approach, laser-induced plasmas (LIPs) have been suggested but have so far been only scarcely used. Here, a novel signal enhancement strategy for laser-based airborne plasma optical Emission spectroscopy for gas phase analytics is presented. In contrast to an electrically driven plasma, in the laser-induced analogue dynamic matter transport equilibrium builds up. The latter results in a rarefied density regime in the plasma core itself, surrounded by an area of compressed matter. The central rarefaction leads to a decrease in plasma intensity and analyte number density, both of which are detrimental for analytical purposes. Since the repetitive ignition of LIPs is a transient process, a restoration of the former gaseous medium by other dynamically equilibrated diffusion processes would be favourable. The presented combination of an airborne LIP and an ultrasonic acoustic resonator yields a fourfold signal enhancement while the Background contribution of ubiquitous air is at the same time effectively suppressed. Since the entire enhancement effect occurs without contact, no additional sources for abrasive sample contamination are introduced. KW - DPSS laser KW - Laser-induced plasma KW - High repetition rate KW - Ultrasonic acoustic resonator KW - Optical emission spectroscopy PY - 2018 DO - https://doi.org/10.1039/C7JA00297A SN - 0267-9477 SN - 1364-5544 VL - 33 IS - 1 SP - 135 EP - 140 PB - Royal Society of Chemistry CY - London AN - OPUS4-43619 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Sebald, M. A1 - Gebauer, J. A1 - Koch, Matthias T1 - Concise Synthesis of Alternariol and Alternariol-9-monomethyl ether as well as their D3-Isotopologues N2 - Abstract Alternariol (AOH) and alternariol-9-monomethyl ether (AME) are two secondary metabolites of Alternaria fungi which can be found in various foodstuff like tomatoes, nuts, and grains. Due to their toxicity and potential mutagenic activity the need for the development of high-throughput methods for the supervision of AOH- and AME-levels is of increasing interest. As the availability of both native and labeled AOH and AME analytical standards is very limited we herein wish to present a novel concise approach towards their synthesis employing a ruthenium-catalyzed ortho-arylation as the key step. Finally, we demonstrate their suitability as internal standards in stable-isotope dilution assay (SIDA)-HPLC-MS/MS analysis commonly used for the quantification of the natural products in food and feed. KW - Mycotoxins KW - Food Analysis KW - Emerging contaminants PY - 2021 DO - https://doi.org/10.1055/a-1698-8328 SN - 0039-7881 VL - 54 IS - 19 SP - 4285 EP - 4293 PB - Thieme AN - OPUS4-53994 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Beslic, D. A1 - Tscheuschner, Georg A1 - Renard, B. Y. A1 - Weller, Michael G. A1 - Muth, Thilo T1 - Comprehensive evaluation of peptide de novo sequencing tools for monoclonal antibody assembly N2 - Monoclonal antibodies are biotechnologically produced proteins with various applications in research, therapeutics and diagnostics. Their ability to recognize and bind to specific molecule structures makes them essential research tools and therapeutic agents. Sequence information of antibodies is helpful for understanding antibody–antigen interactions and ensuring their affinity and specificity. De novo protein sequencing based on mass spectrometry is a valuable method to obtain the amino acid sequence of peptides and proteins without a priori knowledge. In this study, we evaluated six recently developed de novo peptide sequencing algorithms (Novor, pNovo 3, DeepNovo, SMSNet, PointNovo and Casanovo), which were not specifically designed for antibody data. We validated their ability to identify and assemble antibody sequences on three multi-enzymatic data sets. The deep learning-based tools Casanovo and PointNovo showed an increased peptide recall across different enzymes and data sets compared with spectrum-graph-based approaches. We evaluated different error types of de novo peptide sequencing tools and their performance for different numbers of missing cleavage sites, noisy spectra and peptides of various lengths. We achieved a sequence coverage of 97.69–99.53% on the light chains of three different antibody data sets using the de Bruijn assembler ALPS and the predictions from Casanovo. However, low sequence coverage and accuracy on the heavy chains demonstrate that complete de novo protein sequencing remains a challenging issue in proteomics that requires improved de novo error correction, alternative digestion strategies and hybrid approaches such as homology search to achieve high accuracy on long protein sequences. KW - De novo peptide sequencing KW - Bioinformatics KW - Benchmarking study KW - Monoclonal antibody KW - Mass spectrometry KW - Sequence coverage KW - Light chains KW - Heavy chains KW - IgG KW - Immunoglobulins KW - Error correction KW - Sequencing algorithm KW - Preprocessing KW - Missing fragmentation sites KW - Deep learning-based tools PY - 2023 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-570363 DO - https://doi.org/10.1093/bib/bbac542 VL - 24 IS - 1 SP - 1 EP - 12 PB - Oxford University Press AN - OPUS4-57036 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Radnik, Jörg A1 - Knigge, Xenia A1 - Andresen, Elina A1 - Resch-Genger, Ute A1 - Cant, D.J.H. A1 - Shard, A.G. A1 - Clifford, C.A. T1 - Composition, thickness, and homogeneity of the coating of core–shell nanoparticles—possibilities, limits, and challenges of X-ray photoelectron spectroscopy N2 - Core–shell nanoparticles have attracted much attention in recent years due to their unique properties and their increasing importance in many technological and consumer products. However, the chemistry of nanoparticles is still rarely investigated in comparison to their size and morphology. In this review, the possibilities, limits, and challenges of X-ray photoelectron spectroscopy (XPS) for obtaining more insights into the composition, thickness, and homogeneity of nanoparticle coatings are discussed with four examples: CdSe/CdS quantum dots with a thick coating and a small core; NaYF4-based upconverting nanoparticles with a large Yb-doped core and a thin Er-doped coating; and two types of polymer nanoparticles with a poly(tetrafluoroethylene) core with either a poly(methyl methacrylate) or polystyrene coating. Different approaches for calculating the thickness of the coating are presented, like a simple numerical modelling or a more complex simulation of the photoelectron peaks. Additionally, modelling of the XPS background for the investigation of coating is discussed. Furthermore, the new possibilities to measure with varying excitation energies or with hard-energy X-ray sources (hard-energy X-ray photoelectron spectroscopy) are described. A discussion about the sources of uncertainty for the determination of the thickness of the coating completes this review. KW - X-ray spectroscopy KW - Nanoparticles KW - Spectroscopy / Instrumentation KW - Spectroscopy / Theory PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-548305 DO - https://doi.org/10.1007/s00216-022-04057-9 VL - 414 IS - 15 SP - 4331 EP - 4345 PB - SpringerNature AN - OPUS4-54830 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Keller, Julia A1 - Moldenhauer, Daniel A1 - Byrne, L. A1 - Haase, H. A1 - Resch-Genger, Ute A1 - Koch, Matthias T1 - Complexes of the mycotoxins citrinin and ochratoxin A with aluminum ions and their spectroscopic properties N2 - The sensitive detection of the mycotoxin citrinin (CIT) utilizing ist fluorescence requires approaches to enhance the emission. In this respect, we studied the complexation of CIT and ochratoxin A (OTA) with Al3+ in methanol using absorption and fluorescence spectroscopy. In this context, an isocratic high performance liquid chromatography (HPLC) method using a polymer column and a fluorescence detector was also developed that enables the separation of the metal ion complexes from the free ligands and non-complexed Al3+. CIT and OTA showed distinct changes in their absorption and fluorescence properties upon Al3+-coordination, and the fluorescence of CIT was considerably enhanced. Analysis of the photometrically assessed titration of CIT and OTA with Al3+ using the Job plot method revealed 1:2 and 1:1 stoichiometries for the Al3+ complexes of CIT (Al:CIT) and OTA (Al:OTA), respectively. In the case of CIT, only one -diketone moiety participates in Al3+ coordination. These findings can be elegantly exploited for signal amplification and provide the base to reduce the limit of detection for CIT quantification by about an order of magnitude, as revealed by HPLC measurements using a fluorescence detector. KW - Complexation KW - Aluminum KW - Fluorescence KW - Job plot KW - HPLC-DAD/FLD PY - 2018 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-470502 DO - https://doi.org/10.3390/toxins10120538 SN - 2072-6651 VL - 10 IS - 12 SP - 538, 1 EP - 8 PB - MDPI CY - Basel AN - OPUS4-47050 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Trog, S. A1 - El-Khatib, Ahmed A1 - Beck, S. A1 - Makowski, M. A1 - Jakubowski, Norbert A1 - Linscheid, M. T1 - Complementarity of molecular and elemental mass spectrometric imaging of Gadovist™ in mouse tissues N2 - Drug biodistribution analyses can be considered a key issue in pharmaceutical discovery and development. Here, mass spectrometric imaging can be employed as a powerful tool to investigate distributions of drug compounds in biologically and medically relevant tissue sections. Both matrix-assisted laser desorption ionization–mass spectrometric imaging as molecular method and laser ablation inductively coupled plasma–mass spectrometric imaging as elemental detection method were applied to determine drug distributions in tissue thin sections. Several mouse organs including the heart, kidney, liver, and brain were analyzed with regard to distribution of Gadovist™, a gadolinium-based contrast agent already approved for clinical investigation. This work demonstrated the successful detection and localization of Gadovist™ in several organs. Furthermore, the results gave evidence that gadolinium-based contrast agents in general can be well analyzed by mass spectrometric imaging methods. In conclusion, the combined application of molecular and elemental mass spectrometry could complement each other and thus confirm analytical results or provide additional information. KW - Laser ablation inductively coupled plasma–mass spectrometry imaging (LA-ICP-MSI) KW - Gadolinium-based contrast agents (GBCAs) KW - Matrix-assisted laser desorption ionization–mass spectrometry imaging (MALDI-MSI) PY - 2019 DO - https://doi.org/10.1007/s00216-018-1477-9 SN - 1618-2642 SN - 1618-2650 VL - 411 IS - 3 SP - 629 EP - 637 PB - Springer AN - OPUS4-47371 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hantschke, Luisa Lamberta A1 - Steuernagel, Maximilian A1 - Westphalen, Tanja A1 - Kluge, Stephanie A1 - Kaminski, Katja A1 - Piechotta, Christian T1 - Comparison of three different TOP-Assay approaches for the determination of PFAS concentration in soil N2 - Per- and polyfluoroalkyl substances (PFAS) are a large, ever-growing and widely used class of chemicals. Due to the strength of the C-F bond, they do not decompose but accumulate in the environment posing a risk for nature and humans alike. While the use of some PFAS, like perfluorooctanoic acid (PFOA) is already regulated in the EU, new ‘precursor’ substances are used to replace them. However, these precursors may be equally harmful to the environment. In recent years, many ‘hot spot’ sites with high PFAS contaminations in soil have been distinguished, but no German-wide background values have been determined yet. Knowing these background values is crucial to understand the degree of PFAS contamination, underpinning future regulatory decisions. Due to the complexity and variety of different PFAS compounds, one needs to apply a broad spectrum of different techniques to capture most of the PFAS content in one sample. In the framework of this project, 600 soil samples are taken at different sites all over Germany. The concentration of 30 PFAS - 13 carboxylic acids (C4-C18), 5 sulfonic acids (C4-C10) and 12 precursor substances) - is determined in these soil samples using three different sample preparation approaches: 1) ultrasonic extraction of the soil samples with Methanol; 2) preparation of eluates to test the leaching behaviour of the PFAS and 3) TOP assays following the method published by Houtz & Sedlak. Targeted LC-MS/MS is used to determine PFAS concentration after all three preparation steps. For the TOP-assay, the concentration of all 30 PFAS is compared prior to and after the oxidation reaction. Besides the ‘classic’ TOP-Assay, two other TOP-Assay approaches, the dTOP Assay and the photoTOP-Assay, are tested and the results of all three approaches are compared. First, all three TOP-Assay approaches will be tested on a reference soil spiked with a solution including all 30 PFAS measured in the project. Later, soil samples taken in the frame of the priorly described project will be tested. This poster will focus on the results of the experiments comparing the three different TOP Assay approaches in spiked reference soil. Additionally, some of the results of the other sample preparation methods, extraction and eluate preparation will be presented. T2 - FLUOROS 2023 CY - Idstein, Germany DA - 31.08.2023 KW - PFAS TOP Assay soil contamination PY - 2023 AN - OPUS4-58267 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Chazeau, E. A1 - Fabre, C. A1 - Privat, M. A1 - Godard, A. A1 - Racoeur, C. A1 - Bodio, E. A1 - Busser, B. A1 - Wegner, Karl David A1 - Sancey, L. A1 - Paul, C. A1 - Goze, C. T1 - Comparison of the In Vitro and In Vivo Behavior of a Series of NIR-II-Emitting Aza-BODIPYs Containing Different Water-Solubilizing Groups and Their Trastuzumab Antibody Conjugates N2 - The development of new fluorescent organic probes effective in the NIR-II region is currently a fast-growing field and represents a challenge in the domain of medical imaging. In this study, we have designed and synthesized an innovative series of aza-boron dipyrromethenes emitting in the NIR-II region. We have investigated the effect of different water-solubilizing groups not only on the photophysical properties of the compounds but also on their in vitro and in vivo performance after bioconjugation to the antibody trastuzumab. Remarkably, we discovered that the most lipophilic compound unexpectedly displayed the most favorable in vivo properties after bioconjugation. This underlines the profound influence that the fluorophore functionalization approach can have on the efficiency of the resulting imaging agent. KW - NIR-II KW - In vivo imaging KW - Fluorescence KW - Spectroscopy KW - Antibody conjugates PY - 2024 DO - https://doi.org/10.1021/acs.jmedchem.3c02139 SN - 1520-4804 VL - 67 IS - 5 SP - 3679 EP - 3691 PB - ACS Publications CY - Washington, DC AN - OPUS4-59607 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Ickert, Stefanie A1 - Schwaar, Timm A1 - Springer, A. A1 - Grabarics, M. A1 - Riedel, Jens A1 - Beck, S. A1 - Pagel, K. A1 - Linscheid, M. W. T1 - Comparison of the fragmentation behavior of DNA and LNA single strands and duplexes N2 - DNA and locked nucleic acid (LNA) were characterized as single strands, as well as double stranded DNA-DNA duplexes and DNA-LNA hybrids using tandem mass spectrometry with collision-induced dissociation. Additionally, ion mobility spectrometry was carried out on selected species. Oligonucleotide duplexes of different sequences – bearing mismatch positions and abasic sites of complementary DNA 15-mers – were investigated to unravel general trends in their stability in the gas phase. Single stranded LNA oligonucleotides were also investigated with respect to their gas phase behavior and fragmentation upon collision-induced dissociation. In contrast to the collision-induced dissociation of DNA, almost no base loss was observed for LNAs. Here, backbone cleavages were the dominant dissociation pathways. This finding was further underlined by the need for higher activation energies. Base losses from the LNA strand were also absent in fragmentation experiments of the investigated DNA-LNA hybrid duplexes. While DNA-DNA duplexes dissociated easily into single stranded fragments, the high stability of DNA-LNA hybrids resulted in predominant fragmentation of the DNA part rather than the LNA, while base losses were only observed from the DNA single strand of the hybrid. KW - Oligonucleotide fragmentation KW - Locked nucleic acids KW - Collision induced dissociation (CID) KW - Double strands KW - Ion mobility spectrometry PY - 2019 DO - https://doi.org/10.1002/jms.4344 VL - 54 IS - 5 SP - 402 EP - 411 PB - Wiley AN - OPUS4-47485 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Jakubowski, N. A1 - Borrmann, S. A1 - Recknagel, Sebastian A1 - Roik, Janina A1 - Rickert, F. T1 - Comparison of peristaltic pumps used for sample introduction in Inductively Coupled Plasma-Atomic Emission Spectroscopy (ICP-AES) N2 - In this investigation, two conventional peristaltic pumps are compared with a new pump based on the “easy click” principle using a simultaneous ICP-AES instrument with standard operating conditions. It is found that the figures of merit achieved are quite comparable for all three pumps. Relative standard deviations (RSDs) range between 0.2% and 1.8%, and limits of detection as low as 0.1 μg/L have been achieved , demonstrating that the easy click principle of the new pump does not compromise the analytical figures of merit. KW - ICP-AES KW - Peristaltic pumps KW - ICP-MS PY - 2020 IS - 35 / S4 SP - 6 AN - OPUS4-52020 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Groschke, Matthias A1 - Becker, Roland T1 - Comparison of carrier gases for the separation and quantification of mineral oil hydrocarbon (MOH) fractions using online coupled high performance liquid chromatography-gas chromatography-flame ionisation detection N2 - On-line coupled high performance liquid chromatography-gas chromatography-flame ionisation detection (HPLC-GC-FID) was used to compare the effect of hydrogen, helium and nitrogen as carrier gases on the chromatographic characteristics for the quantification of mineral oil hydrocarbon (MOH) traces in food related matrices. After optimisation of chromatographic parameters nitrogen carrier gas exhibited characteristics equivalent to hydrogen and helium regarding requirements set by current guidelines and standardisation such as linear range, quantification limit and carry over. Though nitrogen expectedly led to greater peak widths, all required separations of standard compounds were sufficient and humps of saturated mineral oil hydrocarbons (MOSH) and aromatic mineral oil hydrocarbons (MOAH) were appropriate to enable quantitation similar to situations where hydrogen or helium had been used. Slightly increased peak widths of individual hump components did not affect shapes and widths of the MOSH and MOAH humps were not significantly affected by the use of nitrogen as carrier gas. Notably, nitrogen carrier gas led to less solvent peak tailing and smaller baseline offset. Overall, nitrogen may be regarded as viable alternative to hydrogen or helium and may even extend the range of quantifiable compounds to highly volatile hydrocarbon eluting directly after the solvent peak. KW - Mineral oil hydrocarobons KW - Food KW - Liquid chromatography KW - Gas chromatography KW - MOSH/MOAH PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-601450 DO - https://doi.org/10.1016/j.chroma.2024.464946 SN - 0021-9673 VL - 1726 SP - 1 EP - 7 PB - Elsevier CY - New York, NY AN - OPUS4-60145 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Büchele, Dominique A1 - Rühlmann, Madlen A1 - Schmid, Thomas A1 - Ostermann, Markus T1 - Comparison between uni- and multivariate data analysis for the determination of nutrients in soils using XRF N2 - Aim of the Federal Institute for Materials Research and Testing (BAM) in the frame of I4S - “Intelligence for Soil” is the characterization of an X-ray fluorescence (XRF) based sensor for robust online-application of arable land.Fast soil mapping for agricultural purpose allows the site-specific optimized introduction of plant essential nutrients like S, K, Ca, and Fe. This is important given that the distribution of minor and trace elements varies widely. The non-destructive and contactless XRF is suitable for rapid in-situ analysis on the field due to minimal sample preparation and simultaneous multi-element analysis. Soils are already considered as a complex matrix due to their wide range of elements in different contents, especially light elements with low atomic numbers (Z<19). Problems by measuring soil samples also arise from heterogeneity of the sample and matrix effects. Large grain size distribution causes strong inhomogeneity and matrix effects occur through physical properties related to high concentration of main components. Matrix-specific calibration strategies for determination of total major and minor plant essential nutrients are particularly important regarding these difficulties. For accurate calibration, data treatment and evaluation must also be considered. Empirical univariate and multivariate data analysis were compared regarding their analytical figures of merit. Using principal component analysis (PCA) it was possible to classify German soils in different groups as sand, clay and silt. A calibration curve was obtained by partial least squares regression (PLSR) and the elemental content of German soils was predicted. Elemental distribution maps for different German arable lands were created and the results compared to reference measurements. The correlation between predicted values and reference values were in good agreement for most major and minor nutrients. T2 - BonaRes Conference CY - Berlin, Germany DA - 26.02.2018 KW - PLSR KW - XRF KW - Soil KW - PCA PY - 2018 AN - OPUS4-45007 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Büchele, Dominique A1 - Rühlmann, Madlen A1 - Ostermann, Markus A1 - Schmid, Thomas T1 - Comparison between uni- and multivariate data Analysis for the determination of nutrients in soils using XRF N2 - As part of the BonaRes research initiative funded by the German Federal Ministry of Education and Research (BMBF), strategies are being developed to use soil as a sustainable resource in the bioeconomy. The interdisciplinary subproject I4S - “Intelligence for soil” - is responsible for the development of an integrated system for site-specific management of soil fertility. For this purpose, a platform is constructed and various sensors are installed. Real-time data will be summarized in models and decision-making algorithms will be used to control fertilization and accordingly improve soil functions. This would allow investigations in close meshed dynamic grid and fast analysis of large areas to generate higher yields. This is important given that the distribution of minor and trace elements varies widely. Aim of the Federal Institute for Materials Research and Testing (BAM) in the frame of I4S is the characterization of an X-ray fluorescence (XRF) based sensor for robust online-analysis of arable land. The non-destructive and contactless XRF is suitable for rapid in-situ analysis on the field due to minimal sample preparation and simultaneous multi-element analysis. Soils are already considered as a complex matrix due to their wide range of elements in different contents, especially light elements with low atomic numbers (Z<19). Problems by measuring soil samples also arise from heterogeneity of the sample and matrix effects. Large grain size distribution causes strong inhomogeneity and matrix effects occur through physical properties related to high concentration of main components. Matrix-specific calibration strategies for determination of total major and minor plant essential nutrients are particularly important regarding these difficulties. For accurate calibration, data treatment and evaluation must also be considered. Univariate and multivariate data analysis were compared regarding their analytical figures of merit. Using principal component analysis (PCA) it was possible to classify German soils in different groups as sand, clay and silt. Calibration models were obtained by partial least squares regression (PLSR) and the content of macro- and micronutrients in German soils was predicted. Elemental distribution maps for different German arable lands were created and the results compared to reference measurements. The correlation between predicted values and reference values were in good agreement for most major and minor nutrients. T2 - ESAS/CANAS CY - Berlin, Germany DA - 20.03.2018 KW - Soil KW - XRF KW - PCA KW - PLSR PY - 2018 AN - OPUS4-45010 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jaeger, Carsten T1 - Comparing Nontargeted LC-MS Methods by Co-visualizing Linear Dynamic Range and Chemical Coverage N2 - INTRODUCTION Biological and environmental samples contain thousands of small molecule species that all vary in chemical properties and concentration range. Identifying and quantifying all these chemical entities remains a long-term goal in metabolomics and related systems approaches. Due to its broad selectivity, nontargeted LC-MS is usually the method of choice for broad chemical screening. Optimizing nontargeted LC-MS methods, however, is less straightforward than for targeted methods where sensitivity, specificity, linearity etc. serve as well-established performance criteria. We therefore investigated linear dynamic range (LDR) and chemical classification as alternative performance criteria to guide nontargeted method development. EXPERIMENTAL METHODS LDR was defined as the linear portion of a feature’s response curve over multiple concentration levels. Comparing the LDR of features across methods can be expected to be significantly more robust than comparing signal intensities for a single concentration. To determine LDR for all features, a computational workflow was implemented in the R programming language. For estimating the linear portion of a curve, several mathematical approaches including linear, non-linear and piecewise linear regression were evaluated. Chemical classification was based on ClassyFire, which computes chemical classes for a given structure. To avoid false classifications for incorrectly annotated compounds, we took the following statistical approach. For each compound, multiple likely annotation hypotheses were derived using a recently described workflow[2]. All annotation hypotheses were submitted to ClassyFire and obtained classifications were ranked by frequency. The most frequently suggested class was kept for further analysis. Finally, LDR and chemical classes were visualized together on a molecular network, which was constructed using the well-established MS/MS similarity approach. RESULTS AND DISCUSSION For technical validation of the workflow, several hundred curve fits obtained from the different regression models were reviewed visually. Piecewise linear regression performed the most reliably with respect to the heterogeneous curve shapes of ‘real-life’ features. Validation of chemical classification was performed against a compound library, which showed that 90% of ~450 library compounds were correctly classified using the described approach. Two liquid chromatography methods (HILIC, RPC) as well as two electrospray ionization variants (low/high-temperature ESI) applied to urinary metabolomics were exemplarily studied to test the workflow. Molecular network visualization indicated that of all analytical setups, HILIC/high temperature ESI performed best in terms of high LDR achieved over a wide range of compound classes. Despite one order of magnitude lower sensitivity, HILIC/low temperature ESI showed similar chemical coverage, except for organic nitrogen compounds that were underrepresented compared to high-temperature ESI. Both RPC setups were inferior to the HILIC setups in terms of high-LDR features, supporting previous findings for the given matrix. The higher relative representation of benzenoids and lipids in RPC demonstrated that the workflow successfully captured expected selectivity differences between chromatographies. CONCLUSION When comparing nontargeted LC-MS methods for optimization purposes, ideally all available quantitative and qualitative information should be integrated. The present workflow follows this idea. Visualizing LDR and chemical classes of all features on a molecular network quickly indicated differences in method selectivity that were otherwise difficult to spot. As an automated approach, it is easily applied to repeated optimization steps, enabling effective optimization strategies. T2 - EURACHEM Workshop CY - Tartu, Estonia DA - 20.05.2019 KW - Linear dynamic range KW - Liquid chromatography-mass spectrometry KW - Nontargeted approach KW - Method development KW - Chemical coverage PY - 2019 AN - OPUS4-48333 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Taylor, Tristen L. A1 - Tukhmetova, Dariya A1 - Duong, Thi Phuong Thanh A1 - Böwe, Anna-Maria A1 - Meermann, Björn A1 - Gundlach-Graham, Alexander T1 - Comparative study of the vibrating capillary nebulizer (VCN) and commercially available interfaces for on-line coupling of capillary electrophoresis with ICP-MS N2 - Capillary electrophoresis (CE) is a powerful and sensitive tool for speciation analysis when combined with inductively coupled plasma mass spectrometry (ICP-MS); however, the performance of this technique can be limited by the nature of pneumatic nebulizers. This study compares two commercially available pneumatic nebulizers to a newly introduced vibrating capillary nebulizer (VCN) for on-line coupling of CE with ICP-MS. The VCN is a low-cost, non-pneumatic nebulizer that is based on the design of capillary vibrating sharp-edge spray ionization. As a piezoelectrically driven nebulization source, the VCN creates an aerosol independent of gas flows and does not produce a low-pressure region at the nebulizer orifice. To compare the systems, we performed replicate analyses of sulfate in river water with each nebulizer and the same CE and ICP-MS instruments and determined the figures of merit of each setup. With the CE-VCN-ICP-MS setup, we achieved around 2–4 times lower sensitivity compared to the commercial setups. However, the VCN-based setup provided lower noise levels and better linear correlation from the analysis of calibration standards, which resulted in indistinguishable LOD and LOQ values from the in-house-built VCN-based and commercial setups for CE-ICP-MS analysis. The VCN is found to have the highest baseline stability with a standard deviation of 3500 cts s−1, corresponding to an RSD of 2.7%. High reproducibility is found with the VCN with a peak area RSD of 4.1% between 3 replicate measurements. KW - Speciation analysis KW - Analytical chemistry KW - Surface water PY - 2024 DO - https://doi.org/10.1007/s00216-024-05162-7 SN - 1618-2650 SP - 1 EP - 9 PB - Springer CY - Berlin AN - OPUS4-59472 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -