TY - CONF A1 - Jaeger, Carsten T1 - Improving Small Molecule Annotation In Nontargeted Soft Ionization GC/LC High Resolution Mass Spectrometry N2 - High-resolution mass spectrometry, either combined with gas or liquid chromatography (GC/LC-HR-MS), is currently the most powerful analytical option for broad nontargeted small molecule analysis. To transform HR-MS raw data from metabolomics or environmental studies into chemically meaningful data, several computational steps are needed, including peak detection, deconvolution of these peaks into compounds and putative identification of compounds using databases. Each of these steps can cause problems and still requires methodological advancements. Computational compound annotation as one of the steps, however, has proven particularly challenging, mainly due to the chemical diversity of organic analytes. In addition, different annotation approaches are needed for the different platforms used in HR-MS screening. We recently introduced InterpretMSSpectrum as an annotation workflow for GC-HR-MS using atmospheric pressure chemical ionization (APCI). InterpretMSSpectrum locates molecular ion, fragment and adduct peaks, calculates their most likely sum formula combination and graphically summarizes results as an annotated mass spectrum. As a complementary approach for LC-HR-MS, we presented findMAIN, which scores MS1 spectra based on explained intensity, mass accuracy and isotope charge agreement of adducts and related electrospray ionization (ESI) products to determine the neutral mass of unknown compounds. Both approaches were validated against large spectral libraries containing more than 600 compounds, for which correct annotation was achieved in over 80% of the cases. Based on the experiences from this validation, we here compare soft-ionization GC/LC-HR-MS regarding “annotatability” of unknown compounds from a computational perspective. As a main advantage for GC-HR-MS, the relatively uniform ionization behavior of commonly used trimethylsilyl (TMS) derivatives observed under APCI allowed differentiation of molecular ion peaks from in-source fragments based on relatively compact set of rules. By contrast, neutral mass inference in ESI required a more complex evaluation scheme, due to the higher diversity of ionization products observable in ESI. We demonstrate such differences by practical examples of both software packages applied to metabolomics studies and discuss the challenges connected to transferring the approaches to environmental screening. T2 - ACS Fall Meeting 2019 CY - San Diego, CA, USA DA - 25.09.2019 KW - Compound annotation KW - Mass spectrometry KW - Electrospray ionization KW - Nontarget analysis KW - Accurate mass PY - 2019 AN - OPUS4-49200 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Xue, Boyang A1 - Riedel, Jens A1 - Gornushkin, Igor B. A1 - Zheng, R. A1 - You, Yi T1 - High-throughput underwater elemental analysis through optical emission spectroscopy with ultrasound-assisted μJ-laser-induced breakdown at kHz repetition rate N2 - The elemental analysis of seawater is often critical to the understanding of marine chemistry, marine geochemistry, and the deep-sea ecosystems. Laser-induced breakdown spectroscopy (LIBS) with the advantage of rapid multi-elements detection, has a great potential for in-situ elemental analysis of seawater. In practice, it is crucial to create a compact, low cost and power saving instrument for the long-term deep-sea observation. A recently appeared diode-pumped solid-state (DPSS) laser seems to be a promising candidate as it is both compact and robust. Additionally, its high repetition rate up to hundreds of kHz can provide a considerable throughput for LIBS analysis. However, the DPSS lasers operate at moderate pulse energies, usually less than one mJ, which cannot sustain stable breakdowns in bulk water. To ensure stable laser-induced plasmas underwater with such a μJ-DPSS laser, we introduced an ultrasound source to assist the breakdown process. The phase interface and mass flow generated by the near-field ultrasound can greatly reduce the breakdown threshold and enhance element-specific emissions. Meanwhile, the high repetition-rate pulses can also improve the breakdown probability and generate unique emission lines originated from the water molecule. We further demonstrate that the high repetition-rate DPSS laser combined with the Echelle spectrometer can provide effective quantitative analysis for metal elements in bulk water. T2 - 10th Euro-Mediterranean Symposium on Laser-Induced Breakdown Spectroscopy, EMSLIBS 2019 CY - Czech, Brno DA - 08.09.2019 KW - Ultrasound KW - Underwater LIBS KW - µJ-DPSS laser KW - High repetition-rate PY - 2019 AN - OPUS4-49223 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute A1 - Würth, Christian A1 - Frenzel, Florian A1 - Grauel, Bettina A1 - Nirmalananthan-Budau, Nithiya A1 - Pauli, Jutta A1 - Hoffmann, Katrin T1 - Photoluminescence at BAM – Photoluminescence at BAM – Photophysical Studies, Quantum Yield Measurements, Multiplexing Strategies, and Standards N2 - Photoluminescence applications in the life and material sciences require bright molecular and nanocrystalline emitters, stimuli-responsive optical probes, signal enhancement, multiplexing, and barcoding strategies and traceable methods to quantify the signal-relevant optical properties of luminescent materials at the ensemble and single molecule/particle level. In this context, current research at Division Biophotonics of BAM is presented ranging from dye and nanocrystal photophysics, absolute measurements of photoluminescence quantum yields in the UV/vis/NIR/SWIR, lifetime multiplexing, and the development of different types of fluorescence standards for validating optical-spectroscopic measurements. T2 - Institutskolloquium IPHT CY - Jena, Germany DA - 22.10.2019 KW - Surface group analysis KW - NIR KW - SWIR KW - Quantum dot KW - Lanthanide KW - Cleavable probe KW - Lifetime KW - Multiplexing KW - Sensor KW - Assay PY - 2019 AN - OPUS4-49360 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute A1 - Würth, Christian A1 - Frenzel, Florian A1 - Grauel, Bettina A1 - Weigert, Florian A1 - Wegner, Karl David T1 - Nanocrystals with Luminescence in the vis, NIR and SWIR – Photophysics and Applications N2 - Luminescent nanocrystals like core/shell semiconductor quantum dots and lanthanide doped nanophosphors as well as gold nanoclusters with emission in the visible (vis) and particularly in the near infrared (NIR) and short wavelength infrared (SWIR) region have been increasingly used as reporters in the life sciences and for bioimaging studies in the last years. This has led to sophisticated core-shell particle architectures of different chemical composition utilizing semiconductor quantum dots and lanthanide-based nanocrystals and initiated the design of gold nanoclusters with different ligands. In addition, this led to an increasing number of quantitative spectroscopic studies focusing on the key performance parameter photoluminescence quantum yield to identify optimum particle structures. In the following, an overview of different classes of nanocrystalline emitters and their photophysics is provided and examples for the absolute characterization of the photoluminescence properties of these different vis/NIR/SWIR emitters are shown including excitation power density-dependent studies on the ensemble and single particle level. Also, the impact of such measurements on a profound mechanistic understanding of the underlying nonradiative deactivation pathways is highlighted as required for reporter design. T2 - MIMIT 2019 CY - Peking, People's Republic of China DA - 18.10.2019 KW - Fluorescence KW - Quantum yield KW - Integrating sphere spectroscopy KW - Dye KW - Nanocrystal KW - NIR KW - SWIR KW - Quantum dot KW - Lanthanide nanoparticle KW - Old nanocrystal KW - Imaging KW - Lifetime KW - Nanoparticle PY - 2019 AN - OPUS4-49361 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute A1 - Pauli, Jutta A1 - Würth, Christian A1 - Güttler, Arne A1 - Richter, Maria A1 - Schneider, Thomas T1 - Determining Photoluminescence Quantum Yields of Molecular and Nanocrystal Emitters in the UV/vis/NIR/SWIR N2 - The comparison of different emitter classes and the rational design of the next generation of molecular and nanoscale reporters require accurate and quantitative photo-luminescence measurements. This is of special importance for all photoluminescence applications in the life and material sciences and nanobiophotonics. In the following, procedures for the determination of the spectroscopic key parameter photoluminescence quantum yield, i.e., the number of emitted per absorbed photons, in the UV/vis/NIR/SWIR are presented including pitfalls and achievable uncertainties and material-specific effects related to certain emitter classes are addressed. T2 - Kolloqium National Center for Nanoscience and Technology CY - Peking, People's Republic of China DA - 18.10.2019 KW - Fluorescence KW - Quantum yield KW - Integrating sphere spectroscopy KW - Dye KW - Nanocrystal KW - NIR KW - SWIR KW - Quantum dot KW - Fluorescence standard KW - Uncertainty KW - Calibration PY - 2019 AN - OPUS4-49362 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Kuner, Maximilian A1 - Koch, Matthias A1 - Kühn, S. A1 - Haase, H. T1 - Measuring the sum – A novel screening method for ergot alkaloids in food N2 - Ergot alkaloids play a significant role in human history for more than 1000 years and are part of the most common contaminants of food and feed worldwide. Their high toxicity against humans and livestock even at low concentrations causes a high demand for quick and reliable analytics even though no European limits for ergot alkaloids have been determined yet. Currently the most common methods for the quantitation of the six major ergot alkaloids and their corresponding stereoisomers are HPLC based, using either fluorescence or mass spectrometric detection. Whereas these conventional detection methods measure each compound individually, a novel approach is to transfer all ergot alkaloids to one basic structure, which could be measured as a sum parameter. Since all ergots contain a lysergic acid amide moiety and a differing peptide component, cleaving the molecule into a simple lysergic acid derivative, which could be quantified via either HPLC-FLD or MS/MS, is intended. To clean up the cleavage reaction mixture molecularly imprinted polymers (MIPs) are a simple and effective way to separate the desired structure. Due to the selectivity of MIPs, an improved matrix separation is expected, which results in fewer interferences in the FLD and the possibility to measure samples with more complex matrices. When fully developed, the novel method could overcome some major drawbacks of the conventional detection methods. Higher throughput and the need for less well-trained personnel are just two advantages, that should lead to a quick and cheap quantitation of ergot alkaloids. First results of this project will be presented, funded by the German ZIM program (Zentrales Innovationsprogramm Mittelstand) of the Federal Ministry for Economic Affairs and Energy. T2 - WMFmeetsIUPAC 2019 CY - Belfast, UK DA - 14.10.2019 KW - Ergot KW - Mycotoxins KW - Molecularly imprinted polymers PY - 2019 AN - OPUS4-49436 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Kuner, Maximilian A1 - Koch, Matthias A1 - Haase, H. A1 - Kühn, S. T1 - Measuring the sum – A novel screening method for ergot alkaloids in food N2 - Ergot alkaloids play a significant role in human history for more than 1000 years and are part of the most common contaminants of food and feed worldwide. Their high toxicity against humans and livestock even at low concentrations causes a high demand for quick and reliable analytics even though no European limits for ergot alkaloids have been determined yet. Currently the most common methods for the quantitation of the six major ergot alkaloids and their corresponding stereoisomers are HPLC based, using either fluorescence or mass spectrometric detection. Whereas these conventional detection methods measure each compound individually, a novel approach is to transfer all ergot alkaloids to one basic structure, which could be measured as a sum parameter. Since all ergots contain a lysergic acid amide moiety and a differing peptide component, cleaving the molecule into a simple lysergic acid derivative, which could be quantified via either HPLC-FLD or MS/MS, is intended. To clean up the cleavage reaction mixture molecularly imprinted polymers (MIPs) are a simple and effective way to separate the desired structure. Due to the selectivity of MIPs, an improved matrix separation is expected, which results in fewer interferences in the FLD and the possibility to measure samples with more complex matrices. When fully developed, the novel method could overcome some major drawbacks of the conventional detection methods. Higher throughput and the need for less well-trained personnel are just two advantages, that should lead to a quick and cheap quantitation of ergot alkaloids. First results of this project will be presented, funded by the German ZIM program (Zentrales Innovationsprogramm Mittelstand) of the Federal Ministry for Economic Affairs and Energy. T2 - WMFmeetsIUPAC 2019 CY - Belfast, UK DA - 14.10.2019 KW - Ergot KW - Mycotoxins KW - Molecularly imprinted polymers PY - 2019 AN - OPUS4-49437 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Pisonero, J. A1 - Fandino, J. A1 - Nordlien, J. H A1 - Richter, Silke A1 - Pfeifer, Jens A1 - Quarles, C. D. A1 - Gonzalez, J. A1 - Jakubowski, Norbert A1 - Bordel, N. T1 - Improving the analytical performance of pulsed-GD-SFMS for multi-elemental depth profile analysis of heat-treated Zn coatings on extruded aluminium N2 - The formation of diffusion layers on Zn layers deposited on Al substrates is mainly used to prevent corrosion effects. Evaluation of the influence exerted by different coating methodologies and heat treatments on the formation of these diffusion layers is of great interest for the aluminium industry. Particularly, multi-elemental in-depth distributions of major, minor and trace elements in Zn-coatings is highly demanded before and after heat treatments. A fast characterization of these materials require a direct solid analytical technique able to provide high sensitivity and high depth resolution. For this purpose, an improved analytical method based on the use of pulsed glow discharge sector field mass spectrometry (pulsed-GD-SFMS) is investigated. Glow discharge operating parameters (e.g. pulse duration, pulse frequency), glow discharge source design (e.g. flow tube lengths), and SFMS mass spectra acquisition conditions (e.g. integration time) are evaluated to achieve low sputtering rates, high mass spectra acquisition rates and improved depth resolution. At the optimize conditions Zn coatings deposited by arc-spray and electrodeposition are analysed before and after heat treatments to evaluate the diffusion of different key elements. Moreover, results are validated using femtosecond laser ablation (fs-LA)-ICP-MS, which provides additional information about the heterogeneous distribution of some elements in the Zn coatings. KW - GDMS KW - Pulsed-GD-SFMS KW - Depht profiling KW - Zn KW - Aluminium PY - 2019 DO - https://doi.org/10.1039/c9ja00189a VL - 34 IS - 11 SP - 2252 EP - 2260 PB - Royal Society of Chemistry CY - London AN - OPUS4-49451 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Vogl, Jochen T1 - Cu project on calibration approaches for absolute isotope ratios N2 - This presentations summarizes the difficulties in the purification of enriched copper isotopes by high vacuum subimation. It shows as well thelimitations for a CCQM key comparison on this topic. T2 - CCQM Isotope Ratio Work Group Meeting CY - Bern, Switzerland DA - 09.10.2019 KW - Absolute isotope ratio KW - Isotope purification KW - Metal sublimation KW - Gravimtric isotope mixtures PY - 2019 AN - OPUS4-49518 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hübner, Oskar A1 - Kage, Daniel A1 - Hoffmann, Katrin A1 - Wegner, Karl David A1 - Dhamo, Lorena A1 - Göhde, W. A1 - Resch-Genger, Ute T1 - Luminescence lifetime encoding for flow cytometry with quantum-dot-encoded beads N2 - Spectral encoding of cells or particles and the discrimination of multiple spectral codes are a critical process in flow cytometry (FCM). Typical issues in spectral encoding are, e.g., the spectral overlap of codes, or the increasing complexity of instruments . The exploitation of the photoluminescence lifetime (LT) as an encoding parameter could be used to circumvent both of these issues, as it adds another dimension to the parameter space, or, when used as a stand-alone parameter, requiring only one excitation light source and one detector. While LT encoding was considered already decades ago it is still not implemented as a routine technique in FCM yet, mainly due to the challenge of very few photons being available within the limited transition time of a cell or particle through the laser spot. Recently, we demonstrated LT-FCM based on luminophores with ns LTs in a compact and low-cost flow cytometer. Measurements on polymer microbeads containing luminophores with distinctly different excited state LTs enabled the complete discrimination of three LT codes and five codes in total could be identified. Now, we have extended our approach towards considerably longer LTs by custom-made polymer microbeads loaded with different ratios of InP/ZnS and AgInS2 quantum dots. The use of these materials significantly expands the usable time range for LT encoding to up to several hundred ns. Our studies demonstrate the possibility to further increase the number of viable LT codes for multiplexing in LT-FCM without the need for extensive hardware modifications. T2 - Visions in Cytometry - 29th Annual Conference of the German Society for Cytometry CY - Berlin, Germany DA - 25.07.2019 KW - Multiplexing KW - Lifetime KW - Bead KW - Flow cytometry KW - Fluorescence KW - Quantum dot KW - InP KW - AIS KW - Dye KW - Encoding KW - Barcoding KW - Assay KW - Method PY - 2019 AN - OPUS4-49390 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -