TY - CONF A1 - Pauw, Brian Richard T1 - Getting down to business: pragmatic solutions for laboratory automation N2 - A chemical engineer by training, Brian drifted towards physics and now focuses on a broad spectrum of activities with the aim to improve scientific reproducibility. This includes studies on holistically improving data quality, data collection efficiency and traceability, as well as concomitant laboratory automation for the preparation of consistent, well-documented sample series. The need for pragmatism led to an inexpensive, flexible laboratory automation platform that can be implemented in a modest amount of time. This talk presents that effort. T2 - Future Labs Live 2024 CY - Basel, Switzerland DA - 25.06.2024 KW - Laboratory automation KW - Experiment tracking KW - Holistic experimentation KW - Experimental traceability KW - Data visualisation KW - Parameter correlation. PY - 2024 AN - OPUS4-60583 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - Glimpses of the future: a “full stack”, highly automated materials research laboratory N2 - In our (dramatically understaffed) X-ray scattering laboratory, developing a systematic, holistic methodology let us provide scattering and diffraction information for more than 2100 samples for 200+ projects led by 120+ collaborators. Combined with automated data correction pipelines, and our analysis and simulation software, this led to more than 40 papers in the last 5 years with just over 2 full-time staff members. This year, our new, modular synthesis platform has made more than 1000 additional samples for us to analyse and catalogue. By virtue of the automation, the synthesis of these samples is automatically documented in excruciating detail, preparing them for upload and exploitation in large-scale materials databases. Having developed these proof-of-concepts, we find that materials research itself is changed dramatically by automating dull tasks in a laboratory. This talk is intended to spark ideas and collaborations by providing an overview of: 1) the current improvements in our scattering laboratory methodology, 2) introducing our open, modular robotic platform that is used for systematic sample preparation, and 3) demonstrating the data structure of the synthesis logs and measurements. Finally, the remaining bottlenecks and points of attention across all three are highlighted. T2 - FAIRmat seminar CY - Berlin, Germany DA - 28.09.2023 KW - Data stewartship KW - Metadata collection KW - Laboratory methodology KW - MOUSE KW - Robotics KW - Lab automation KW - Holistic science PY - 2023 UR - https://www.fairmat-nfdi.eu/events/brian-pauw AN - OPUS4-58464 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Sieg, Holger A1 - Heilscher, Jasmin A1 - Ott, Franziska A1 - Böhmert, Linda A1 - Drusch, Stephan A1 - Thünemann, Andreas A1 - Rohn, Sascha A1 - Braeuning, Albert A1 - Kieserling, Helena T1 - Direct Interactions of Micro- and Nanoplastics with Proteins – A Key to Mechanistic Understanding? N2 - Micro-/Nanoplastics (MNP) have gained widespread scientific and public attention within the last two decades. While knowledge about measuring techniques, occurrence and exposure was improved substantially, questions on toxicological impact of MNP remained unclear. A major reason for that are the continued remaining knowledge gaps with regard to mechanistical understanding of MNP effects. Our work aimed at investigating MNP properties, protein interactions, and cellular effects in combination. Therefore, we characterized MNP-protein- adsorption, changes in protein structure, cellular uptake and cellular modes of action. In a first study, we studied the molecular interactions of β-lactoglobulin, a serum and storage protein, with different MNP materials1. We identified structural changes, depending on physicochemical MNP properties, using FTIR- and fluorescence spectroscopy. Furthermore, we investigated cellular uptake of MNP individually and as a complex with β-lactoglobulin and studied the effects on cell growth and viability, using colorimetric MTT testing, flow cytometry, and cell impedance measurements. MNP material properties, especially hydrophobicity, had an impact on protein folding and consequently also on cellular interactions. In a second study, we applied α-amylase, an extracellular digestive protein with enzymatic activity. Here, in addition, we investigated the influence of MNP binding on enzyme activity, using a colorimetric starch degradation assay. We observed for the most MNP, that adsorption processes resulted in a decrease of enzyme activity. Furthermore, we used Alexa633 staining to visualize MNP uptake with and without the presence of α-amylase. Taken together, this work aims to close data gaps regarding mechanistical effects of MNP on cells by investigating direct MNP-protein-interactions. Mechanistic knowledge is crucial for understanding toxicological effects of MNP, and therefore, also for the risk assessment of possible hazards on human health. T2 - 92. Jahrestagung der Deutschen Gesellschaft für Experimentelle und Klinische Pharmakologie und Toxikologie (DGPT) CY - Düsseldorf, Germany DA - 17.03.2026 KW - Microplastics KW - Nanoplastics PY - 2026 AN - OPUS4-65667 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - Chasing perfection: A holistic approach to materials science scattering experiments N2 - The materials scientists we work with do not want (or need) to learn the ways of the scatterer; they are primarily interested in obtaining trustworthy answers. In particular, they need structural understanding in light of the wider framework of their experiment(s). Our interest, therefore, lies in helping them attain this this interconnected understanding, while using such investigations to further hone our methodology to approximate perfection. While perfection is by definition an unattainable goal, we have spent the last 15+ years exploring and expanding on many of its constituent aspects (often together with likeminded people) [1]. These aspects include: - developing various visualization and simulation tools, - deconstructing data corrections and uncertainty estimation, - advancing analysis methods, - quantifying questions on traceability, documentation, - reproducible automation of synthesis-, measurement- and data pipelines, - data visualization, exploration and education, - and many more… T2 - XIX International Small Angle Scattering Conference CY - Taipei, Taiwan DA - 04.11.2024 KW - Methodology KW - X-ray scattering KW - Data quality KW - Data provenance KW - Data stewardship KW - Lab automation KW - Perfection PY - 2024 AN - OPUS4-61625 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Smales, Glen Jacob A1 - Pauw, Brian Richard T1 - DACHS/MOFs/AutoMOFs_2/Synthesis N2 - The DACHS (Database for Automation, Characterization and Holistic Synthesis) project aims to create completely traceable experimental data, covering syntheses, measurements, analyses, and interpretations. DACHS_MOFs focuses on the synthesis and characterisation of metal-organic frameworks, across multiple, automation-assisted experimental series (AutoMOFs), with the overall goal of producing reproducible MOF samples through tracking of the synthesis parameters. DACHS_MOFs is simultaneously used to test the DACHS principles. This upload contain synthesis data from AutoMOFs_2 in HDF5 format (.h5). Each .h5 file contains detailed information on the chemical, experimenal, and synthesis parameters used during the synthesis of a single AutoMOF sample. KW - Automation KW - Procedure KW - Synthesis KW - Traceability PY - 2024 DO - https://doi.org/10.5281/zenodo.11236074 PB - Zenodo CY - Geneva AN - OPUS4-60611 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - A holistic experiment chain for scattering-powered materials science investigations N2 - In our (dramatically understaffed) X-ray scattering laboratory, developing a systematic, holistic methodology1 let us provide scattering and diffraction information for more than 2100 samples for 200+ projects led by 120+ collaborators over the last five years. Combined with universal, automat-ed data correction pipelines, as well as our analysis and simulation software, this led to more than 40 papers2 in the last 5 years with just over 2 full-time staff members. While this approach greatly improved the consistency of the results, the consistency of the samples and sample series provided by the users was less reliable nor necessarily reproducible. To address this issue, we built an EPICS-controlled, modular synthesis platform to add to our laboratory. To date, this has prepared over 1200 additional (Metal-Organic Framework) samples for us to meas-ure, analyse and catalogue. By virtue of the automation, the synthesis of these samples is automat-ically documented in excruciating detail, preparing them for upload and exploitation in large-scale materials databases alongside the morphological results obtained from the automated X-ray scat-tering analysis. Having developed these proof-of-concepts, we find that the consistency of results are greatly im-proved by virtue of their reproducibility, hopefully adding to the reliability of the scientific findings as well. Additionally, the nature of the experiments has changed greatly, with much more emphasis on preparation and careful planning. This talk will discuss the advantages and disadvantages of this highly integrated approach and will touch upon upcoming developments. T2 - canSAS-XIII CY - Grenoble, France DA - 16.10.2023 KW - Methodology KW - Lab automation KW - X-ray scattering KW - Automated synthesis KW - Data stewardship KW - Holistic experimental procedures KW - Scicat PY - 2023 AN - OPUS4-58643 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Diehn, S. A1 - Zimmermann, B. A1 - Tafintseva, V. A1 - Seifert, S. A1 - Bagcioglu, M. A1 - Ohlson, M. A1 - Weidner, Steffen A1 - Fjellheim, S. A1 - Kohler, A. A1 - Kneipp, Janina T1 - Combining Chemical Information From Grass Pollen in Multimodal Characterization N2 - The analysis of pollen chemical composition is important to many fields, including agriculture, plant physiology, ecology, allergology, and climate studies. Here, the potential of a combination of different spectroscopic and spectrometric methods regarding the characterization of small biochemical differences between pollen samples was evaluated using multivariate statistical approaches. Pollen samples, collected from three populations of the grass Poa alpina, were analyzed using Fourier-transform infrared (FTIR) spectroscopy, Raman spectroscopy, surface enhanced Raman scattering (SERS), and matrix assisted laser desorption/ionization mass spectrometry (MALDI-TOF MS). The variation in the sample set can be described in a hierarchical framework comprising three populations of the same grass species and four different growth conditions of the parent plants for each of the populations. Therefore, the data set can work here as a model system to evaluate the classification and characterization ability of the different spectroscopic and spectrometric methods. ANOVA Simultaneous Component Analysis (ASCA) was applied to achieve a separation of different sources of variance in the complex sample set. Since the chosen methods and sample preparations probe different parts and/or molecular constituents of the pollen grains, complementary information about the chemical composition of the pollen can be obtained. By using consensus principal component analysis (CPCA), data from the different methods are linked together. This enables an investigation of the underlying global information, since complementary chemical data are combined. The molecular information from four spectroscopies was combined with phenotypical information gathered from the parent plants, thereby helping to potentially link pollen chemistry to other biotic and abiotic parameters. KW - Pollen KW - MALDI-TOF MS KW - FTIR KW - Raman KW - Multivariate analyses PY - 2020 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-504822 DO - https://doi.org/10.3389/fpls.2019.01788 VL - 10 SP - 1788 AN - OPUS4-50482 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Kricheldorf, H. R. A1 - Weidner, Steffen T1 - The Ring-Opening Polymerisation-Polycondensation (ROPPOC) Approach to cyclic Polymers N2 - A new concept called “Ring-Opening Polymerization (ROP) combined with simultaneous POlyCondensation” (ROPPOC) is presented and discussed. This synthetic strategy is based on the intermediate formation of chains having two end groups that can react with each other. The ROPPOC syntheses are subdivided into three groups according to the nature of the chain ends: two ionic end groups, one ionic and one covalent chain end and a combination of two reactive covalent end groups may be involved, depending on the catalyst. The usefulness for the preparation of cyclic polymers is discussed with a review of numerous previously published examples. These examples concern to following classes of cyclic polymers: polypeptides, polyamides, polyesters, including polycarbonates, and cyclic polysiloxanes. It is demonstrated, that the results of certain ROPPOC syntheses are in contradiction to the Jacobson-Stockmayer theory. Finally, the usefulness of ROPPOCs for the detection of polydisperse catenanes is discussed. KW - Ring-opening Polymerisation KW - MALDI-TOF MS KW - ROPPOC KW - Cyclic PY - 2020 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-508509 DO - https://doi.org/10.1002/marc.202000152 SP - 2000152 PB - Wiley AN - OPUS4-50850 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Kricheldorf, H. R. A1 - Weidner, Steffen A1 - Meyer, A. T1 - High Tm poly(L-lactide)s via REP or ROPPOC of L-lactide N2 - A new kind of high melting (HTm) pol(L-lactide) was discovered when cyclic poly(L-lactide)s were prepared by ring-expansion polymerization with cyclic tin catalysts at 130–160 °C in bulk. By DSC measurements with 10 K min−1 melting temperatures (Tm) in the range of 190–196 °C were found. The WAXS and SAXS measurements evidenced that not a new crystal lattice but a well-ordered morphology and a higher perfection of the crystallites are responsible for the high Tm values and high crystallinities. Under identical reaction conditions SnOct2-catalyzed and alcohol-initiated ROPs do not yield these crystallites. Furthermore, it was found that the standard crystallites are kinetically favored upon rapid crystallization, whereas the high melting form of poly(L-lactide) is thermodynamically more stable. KW - Polylactide KW - MALDI-TOF MS KW - ROPPOC PY - 2020 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-507477 DO - https://doi.org/10.1039/c9py01908a VL - 11 IS - 12 SP - 2182 EP - 2193 PB - Royal Society of Chemistry AN - OPUS4-50747 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Weidner, Steffen A1 - Meyer, A. A1 - Chatti, S. A1 - Kricheldorf, H. R. T1 - About the transformation of low Tm into high Tm poly(L-lactide)s by annealing under the influence of transesterification catalysts N2 - Cyclic polylactides were prepared in bulk at 170 °C, crystallized at 120 °C and then annealed at temperatures between 130 and 170 C with variation of catalyst, catalyst concentration and annealing time. The transformation of the initially formed low melting (LTm) crystallites, having melting temperatures (Tm) <180 °C into high melting (HTm) crystallites having Tm values > 189 °C was monitored by means of DSC measurements and characterized in selected cases by SAXS measurements. It was confirmed that the formation of HTm crystallites involves a significant growth of the thickness of the lamellar crystallites along with smoothing of their surface. Annealing at 170 °C for 1 d or longer causes thermal degradation with lowering of the molecular weights, a gradual transition of cyclic into linear chains and a moderate decrease of lamellar thickness. An unexpected result revealed by MALDI TOF mass spectrometry is a partial reorganization of the molecular weight distribution driven by a gain of crystallization enthalpy. KW - Polylactide KW - MALDI-TOF MS KW - Crystallization KW - Annealing PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-521062 DO - https://doi.org/10.1039/d0ra10012a VL - 11 IS - 5 SP - 2872 EP - 2883 PB - Royal Society of Chemistry AN - OPUS4-52106 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -