TY - JOUR A1 - Hellemans, S. A1 - Rocha, M. M. A1 - Wang, M. A1 - Romero Arias, J. A1 - Aanen, D. K. A1 - Bagnères, A.-G. A1 - Buček, A. A1 - Carrijo, T. F. A1 - Chouvenc, T. A1 - Cuezzo, C. A1 - Constantini, J. P. A1 - Constantino, R. A1 - Dedeine, F. A1 - Deligne, J. A1 - Eggleton, P. A1 - Evans, T. A. A1 - Hanus, R. A1 - Harrison, Mark C. A1 - Harry, M. A1 - Josens, G. A1 - Jouault, C. A1 - Kalleshwaraswamy, C. M. A1 - Kaymak, E. A1 - Korb, J. A1 - Lee, C.-Y. A1 - Legendre, F. A1 - Li, H.-F. A1 - Lo, N. A1 - Lu, T. A1 - Matsuura, K. A1 - Maekawa, K. A1 - McMahon, Dino Peter A1 - Mizumoto, N. A1 - Oliveira, D. E. A1 - Poulsen, M. A1 - Sillam-Dussès, D. A1 - Su, N.-Y. A1 - Tokuda, G. A1 - Vargo, E. L. A1 - Ware, J. L. A1 - Šobotník, J. A1 - Scheffrahn, R. H. A1 - Cancello, E. A1 - Roisin, Y. A1 - Engel, M. S. A1 - Bourguignon, T. T1 - Genomic data provide insights into the classification of extant termites N2 - The higher classification of termites requires substantial revision as the Neoisoptera, the most diverse termite lineage, comprise many paraphyletic and polyphyletic higher taxa. Here, we produce an updated termite classification using genomic-scale analyses. We reconstruct phylogenies under diverse substitution models with ultraconserved elements analyzed as concatenated matrices or within the multi-species coalescence framework. Our classification is further supported by analyses controlling for rogue loci and taxa, and topological tests. We show that the Neoisoptera are composed of seven family-level monophyletic lineages, including the Heterotermitidae Froggatt, Psammotermitidae Holmgren, and Termitogetonidae Holmgren, raised from subfamilial rank. The species-rich Termitidae are composed of 18 subfamily-level monophyletic lineages, including the new subfamilies Crepititermitinae, Cylindrotermitinae, Forficulitermitinae, Neocapritermitinae, Protohamitermitinae, and Promirotermitinae; and the revived Amitermitinae Kemner, Microcerotermitinae Holmgren, and Mirocapritermitinae Kemner. Building an updated taxonomic classification on the foundation of unambiguously supported monophyletic lineages makes it highly resilient to potential destabilization caused by the future availability of novel phylogenetic markers and methods. The taxonomic stability is further guaranteed by the modularity of the new termite classification, designed to accommodate as-yet undescribed species with uncertain affinities to the herein delimited monophyletic lineages in the form of new families or subfamilies. KW - Termite KW - Taxonomy KW - Evolution PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-608276 DO - https://doi.org/10.1038/s41467-024-51028-y VL - 15 IS - 1 SP - 1 EP - 17 PB - Springer Science and Business Media LLC AN - OPUS4-60827 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Schneider, Beate A1 - Pfeiffer, Friedhelm A1 - Remus, Daniela A1 - Dyall-Smith, Mike A1 - Kunte, Hans-Jörg ED - Klepac-Ceraj, Vanja T1 - Genome sequence of Pseudomonas silesiensis strain G3, a member of a bacterial consortium capable of polyethylene degradation N2 - A consortium of landfill bacteria including strain G3 can break down polyethylene, a long-lasting plastic that accumulates in the environment. The complete genome sequence of strain G3 was determined by PacBio and Nanopore sequencing and consists of three circular replicons. Genome-based classification assigned strain G3 to the species Pseudomonas silesiensis. KW - PE degradation KW - Polyethylene PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-611618 DO - https://doi.org/10.1128/mra.00138-24 SN - 2576-098X VL - 13 IS - 11 SP - 1 EP - 3 PB - American Society for Microbiology AN - OPUS4-61161 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Zweigle, J. A1 - Schmidt, A. A1 - Bugsel, B. A1 - Vogel, Christian A1 - Simon, Fabian A1 - Zwiener, C. T1 - Perfluoroalkyl acid precursor or weakly fluorinated organic compound? A proof of concept for oxidative fractionation of PFAS and organofluorines N2 - Organofluorine mass balance approaches are increasingly applied to investigate the occurrence of per- and polyfluoroalkyl substances (PFAS) and other organofluorines in environmental samples more comprehensively. Usually, complex samples prevent the identification and quantification of every fluorine-containing molecule. Consequently, large unidentified fractions between fluorine sum parameters such as extractable organic fluorine (EOF) and the sum of quantified analytes are frequently reported. We propose using oxidative conversion to separate (unidentified) weakly fluorinated compounds (e.g., pesticides, pharmaceuticals) from PFAA-precursors (perfluoroalkyl chain lengths ≥ C6). We show with three organofluorine model substances (flufenamic acid, diflufenican, pantoprazole) that CF3-groups or aromatic fluorine can be quantitatively converted to inorganic fluoride and trifluoroacetic acid (TFA) by applying PhotoTOP oxidation (UV/TiO2). The principle of fluorine separation in mixtures is demonstrated by the oxidation of the three weakly fluorinated compounds together with the PFAA-precursor 6:2/6:2 fluorotelomer mercaptoalkyl phosphate diester (FTMAP). After oxidation, the products F− and TFA were separated from PFCAs ( C4) by SPE, and the fractions were analyzed individually. Closed mass balances both with and without the addition of organic matrix were achieved. Eventually, the fluorine balance was verified by total fluorine measurements with combustion ion chromatography (CIC). The proposed methods should be considered a proof of concept to potentially explain unidentified fractions of the EOF, especially if compounds with low fluorine content such as pesticides, pharmaceuticals, and their transformation products contribute largely to the EOF. Future studies are needed to show the applicability to the complexity of environmental samples. Graphical Abstract KW - Combustion Ion Chromatography KW - Per- and Polyfluoroalkyl substances (PFAS) PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-613429 DO - https://doi.org/10.1007/s00216-024-05590-5 SP - 1 EP - 10 PB - Springer Science and Business Media LLC AN - OPUS4-61342 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Braymer, Joseph J. A1 - Stehling, Oliver A1 - Stümpfig, Martin A1 - Rösser, Ralf A1 - Spantgar, Farah A1 - Blinn, Catharina M. A1 - Mühlenhoff, Ulrich A1 - Pierik, Antonio J. A1 - Lill, Roland T1 - Requirements for the biogenesis of [2Fe-2S] proteins in the human and yeast cytosol N2 - The biogenesis of iron–sulfur (Fe/S) proteins entails the synthesis and trafficking of Fe/S clusters, followed by their insertion into target apoproteins. In eukaryotes, the multiple steps of biogenesis are accomplished by complex protein machineries in both mitochondria and cytosol. The underlying biochemical pathways have been elucidated over the past decades, yet the mechanisms of cytosolic [2Fe-2S] protein assembly have remained ill-defined. Similarly, the precise site of glutathione (GSH) requirement in cytosolic and nuclear Fe/S protein biogenesis is unclear, as is the molecular role of the GSH-dependent cytosolic monothiol glutaredoxins (cGrxs). Here, we investigated these questions in human and yeast cells by various in vivo approaches. [2Fe-2S] cluster assembly of cytosolic target apoproteins required the mitochondrial ISC machinery, the mitochondrial transporter Atm1/ABCB7 and GSH, yet occurred independently of both the CIA system and cGrxs. This mechanism was strikingly different from the ISC-, Atm1/ABCB7-, GSH-, and CIA-dependent assembly of cytosolic–nuclear [4Fe-4S] proteins. One notable exception to this cytosolic [2Fe-2S] protein maturation pathway defined here was yeast Apd1 which used the CIA system via binding to the CIA targeting complex through its C-terminal tryptophan. cGrxs, although attributed as [2Fe-2S] cluster chaperones or trafficking proteins, were not essential in vivo for delivering [2Fe-2S] clusters to either CIA components or target apoproteins. Finally, the most critical GSH requirement was assigned to Atm1-dependent export, i.e. a step before GSH-dependent cGrxs function. Our findings extend the general model of eukaryotic Fe/S protein biogenesis by adding the molecular requirements for cytosolic [2Fe-2S] protein maturation. KW - Biokorrosion KW - Hydrogenasen KW - Microbially Induced Corrosion PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602328 DO - https://doi.org/10.1073/pnas.2400740121 SN - 0027-8424 VL - 121 IS - 21 SP - 1 EP - 12 PB - Proceedings of the National Academy of Sciences CY - Washington D.C. AN - OPUS4-60232 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Maulas, Kryzzyl M. A1 - Paredes, Charla S. A1 - Tabelin, Carlito Baltazar A1 - Jose, Mark Anthony A1 - Opiso, Einstine M. A1 - Arima, Takahiko A1 - Park, Ilhwan A1 - Mufalo, Walubita A1 - Ito, Mayumi A1 - Igarashi, Toshifumi A1 - Phengsaart, Theerayut A1 - Villas, Edrhea A1 - Dagondon, Sheila L. A1 - Metillo, Ephrime B. A1 - Uy, Mylene M. A1 - Manua, Al James A. A1 - Villacorte-Tabelin, Mylah T1 - Isolation and Characterization of Indigenous Ureolytic Bacteria from Mindanao, Philippines: Prospects for Microbially Induced Carbonate Precipitation (MICP) N2 - Microbially induced carbonate precipitation (MICP), a widespread phenomenon in nature, is gaining attention as a low-carbon alternative to ordinary Portland cement (OPC) in geotechnical engineering and the construction industry for sustainable development. In the Philippines, however, very few works have been conducted to isolate and identify indigenous, urease-producing (ureolytic) bacteria suitable for MICP. In this study, we isolated seven, ureolytic and potentially useful bacteria for MICP from marine sediments in Iligan City. DNA barcoding using 16s rDNA identified six of them as Pseudomonas stutzeri, Pseudomonas pseudoalcaligenes, Bacillus paralicheniformis, Bacillus altitudinis, Bacillus aryabhattai, and Stutzerimonas stutzeri but the seventh was not identified since it was a bacterial consortium. Bio-cementation assay experiments showed negligible precipitation in the control (without bacteria) at pH 7, 8, and 9. However, precipitates were formed in all seven bacterial isolates, especially between pH 7 and 8 (0.7–4 g). Among the six identified bacterial species, more extensive precipitation (2.3–4 g) and higher final pH were observed in S. stutzeri, and B. aryabhattai, which indicate better urease production and decomposition, higher CO2 generation, and more favorable CaCO3 formation. Characterization of the precipitates by scanning electron microscopy with energy dispersive X-ray spectroscopy (SEM-EDS) and attenuated total reflectance Fourier transform spectroscopy (ATR-FTIR) confirmed the formation of three carbonate minerals: calcite, aragonite, and vaterite. Based on these results, all six identified indigenous, ureolytic bacterial species from Iligan City are suitable for MICP provided that the pH is controlled between 7 and 8. To the best of our knowledge, this is the first report of the urease-producing ability and potential for MICP of P. stutzeri, P. pseudoalcaligenes, S. stutzeri, and B. aryabhattai. KW - Calcium carbonate KW - Microbially induced carbonate precipitation (MICP) KW - Ureolytic bacteria PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-600888 DO - https://doi.org/10.3390/min14040339 VL - 14 IS - 4 SP - 1 EP - 15 PB - MDPI AN - OPUS4-60088 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Mishra, Biswajit A1 - Kumar Singh, Amit A1 - Shankar Mahobia, Girija T1 - Hydrogen reduction studies of low-grade multimetallic magnetite ore pellets N2 - The hydrogen reducibility of pellets made from a low-grade multimetallic magnetite ore (Fe content ∼ 45 %) was investigated in the present study. Pellets were reduced in a horizontal tube furnace at temperatures ranging from 973 K to 1173 K for 1 to 60 min. Pure Hydrogen (H2) gas (99.9 %) at three flow rates of 0.25 L/min, 0.5 L/min, and 1 L/min were blown during the reduction process. A maximum reduction degree of 94.07 %, metallization ratio of 0.925, and H2 gas utilization of 9.01 % were obtained at a temperature and a reduction time of 1173 K and 60 min, respectively. In order to optimize the hydrogen utilization, a reduction temperature of 1173 K, a reduction time of 45 min, and a gas flow rate of 0.25 L/min were selected, resulting in a reduction degree and metallization ratio of 90 % and 0.89, respectively. The cold crushing strength (CCS) of the reduced pellets initially decreased and then increased slightly, exhibiting behavior similar to high-grade ores. Imputities like SiO2, Al2O3, and MgO, present in the low grade ores are found to control the porosity of the pellets, directly affecting the CCS and reducibility of the pellets. KW - Cold Crushing Strength KW - Low-grade iron ores KW - Hydrogen Reduction KW - Metallization ratio KW - Gangue elements PY - 2024 DO - https://doi.org/10.1016/j.mineng.2024.108823 SN - 0892-6875 VL - 215 SP - 1 EP - 14 PB - Elsevier B.V. AN - OPUS4-62539 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - da Silva, Luiza Helena Bueno A1 - Goes, Aryel C. A1 - Rodrigues, Andre A1 - Fourcassié, Vincent A1 - McMahon, Dino Peter A1 - Haifig, Ives T1 - Social immune response reflects infection progression in a soldierless termite N2 - Social interactions represent a double-edged sword. On one hand, sociality can facilitate sanitary collective behaviours; on the other hand, it creates opportunities for pathogen transmission. In termites, sanitary behaviours can entail a rescuing strategy at early stages of infection, followed by the elimination at later stages. We explored whether the neotropical soldierless species Anoplotermes pacificus employs a progressive approach towards infected nestmates, with different behavioural displays depending on the infection stage. We infected A. pacificus workers with the fungus Metarhizium anisopliae and incubated them for 2, 12, 15 and 20 h, corresponding to infection progression and, therefore, severity. Infected termites were placed with naïve nestmates and their behaviours were recorded for 3 h. Fungus-infected termites triggered up to fourfold higher levels of sanitary behaviour than in non-infected termites. Antennation behaviour decreased during the observation period, whereas sanitary behaviour, which we defined as directed behaviour towards the focal termite involving mouthparts, increased in frequency as incubation duration increased. Sanitary behaviour therefore appears to be a strategy for colony disinfection, which varies in intensity according to infection status, ultimately resulting in the immobilisation of infected individuals at later stages of infection. Alarm responses were also up to three times more frequent in treatment than in control groups and did not vary with incubation duration. A. pacificus workers therefore identify, communicate and respond to pathogen-treated individuals in a progressive manner, indicating that collective responses in this species are also significantly shaped by the stage of infection. By progressively modulating their social immune responses, termites may be able to optimize resource allocation within the colony by balancing the risk of individual infection versus protection of the group. KW - Anoplotermes pacificus KW - Isoptera KW - Infection KW - Metarhizium KW - Social immunity PY - 2024 DO - https://doi.org/10.1007/s00265-024-03556-2 VL - 79 IS - 1 SP - 1 PB - Springer Science and Business Media LLC AN - OPUS4-62397 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Vogel, Christian A1 - Roesch, Philipp A1 - Wittwer, Philipp A1 - Sommerfeld, Thomas A1 - Riedel, Maren A1 - Leube, Peter A1 - Kalbe, Ute A1 - Schoknecht, Ute A1 - Simon, Franz-Georg T1 - Per- and Polyfluoroalkyl Substances (PFAS) in Ski Waxes and Snow from Cross-Country Skiing in Germany - Comparative study of Sum Parameter and Target Analysis N2 - Per- and polyfluoroalkyl substances (PFAS) are often environmentally exposed via discharge through human consumer products, such as ski waxes. In our study we analyzed various ski waxes from the 1980s and 2020s, to determine both the sum parameter values total fluorine (TF), extractable organically bound fluorine (EOF), hydrolysable organically bound fluorine (HOF) as well as targeted PFAS analysis. This showed that modern high-performance waxes contain up to 6 % TF, but also PFAS-free labelled ski waxes contain traces of PFAS with EOF/HOF values in the low mg kg-1 range. With the ban of all fluorine-based waxes with the start of the 2023/2024 winter season this will probably change soon. Moreover, we applied our analysis methods to snow samples from a frequently used cross country ski trail (Kammloipe) in the Ore Mountain region in Germany, assessing the potential PFAS entry/discharge through ski waxes. Melted snow samples from different spots were analyzed by the adsorbable organically bound fluorine (AOF) sum parameter and PFAS target analysis and confirmed the abrasion of the ski waxes into the snow. Moreover, on a PFAS hotspot also soil samples were analyzed, which indicate that PFAS from the ski waxes adsorb after snow melting into the soil. KW - Combustion Ion Chromatography KW - Per- and Polyfluoroalkyl substances (PFAS) KW - Consumer Products PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-612760 DO - https://doi.org/10.1016/j.hazadv.2024.100484 VL - 16 SP - 1 EP - 5 PB - Elsevier B.V. AN - OPUS4-61276 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Roesch, Philipp A1 - Schinnen, Andrea A1 - Riedel, Maren A1 - Sommerfeld, Thomas A1 - Sawal, G. A1 - Bandow, N. A1 - Vogel, Christian A1 - Kalbe, Ute A1 - Simon, Franz-Georg T1 - Investigation of pH-dependent extraction methods for PFAS in (fluoropolymer-based) consumer products: A comparative study between targeted and sum parameter analysis N2 - Here, we report a comparative study of different sum parameter analysis methods for the extraction of per- and polyfluoroalkyl substances (PFAS) from manufactured consumer products, which can be measured by combustion ion chromatography (CIC). Therefore, a hydrolysis-based extraction method was further developed, which accounts for the addition of hydrolyzable covalently bound polyfluoroalkylated side-chain polymers (SFPs) to the extractable organic fluorine portion of the mass balance proposed as "hydrolyzable organically bound fluorine" (HOF). To test this hypothesis, the method was applied to 39 different consumer products containing fluoropolymers or monomeric PFAS taken from four different categories: outdoor textiles, paper packaging, carpeting, and permanent baking sheets. We also evaluated the method's efficiency by extracting four synthesized fluorotelomer polyacrylate reference compounds. The total fluorine (TF) and extractable organically bound fluorine (EOF) values were measured through CIC using established protocols. The TF values ranged from sub-ppb to %-levels, depending on the compound class. All samples showed results for hydrolyzed organofluorine (HOF) between 0.03 and 76.3 μg/g, while most EOF values were lower (0.9 and <0.4 mmol/g for both types of chitosan and activated carbon, respectively). Milled activated carbon proved to be the better adsorption material, considering the fixed volume of the adsorber (>99.9% PFOS adsorbed). Overall, the cross-linking agent concentration in chitosan is a crucial factor influencing its PFOS absorption potential. Our results feature cross-linked chitosan as an effective economic and ecologic alternative for PFOS adsorption in aqueous solutions. KW - Combustion Ion Chromatography KW - Per- and Polyfluoroalkyl substances (PFAS) KW - Remediation PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-618406 DO - https://doi.org/10.3390/app142311145 VL - 14 IS - 23 SP - 1 EP - 13 PB - MDPI AN - OPUS4-61840 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Wen, Keqing A1 - Gorbushina, Anna A1 - Schwibbert, Karin A1 - Bell, Jérémy T1 - Microfluidic platform with precisely controlled hydrodynamic parameters and integrated features for generation of microvortices to accurately form and monitor biofilms in flow N2 - Microorganisms often live in habitats characterized by fluid flow, and their adhesion to surfaces in industrial systems or clinical settings may lead to pipe clogging, microbially influenced corrosion, material deterioration, food spoilage, infections, and human illness. Here, a novel microfluidic platform was developed to investigate biofilm formation under precisely controlled (i) cell concentration, (ii) temperature, and (iii) flow conditions. The developed platform central unit is a single-channel microfluidic flow cell designed to ensure ultrahomogeneous flow and condition in its central area, where features, e.g., with trapping properties, can be incorporated. In comparison to static and macroflow chamber assays for biofilm studies, microfluidic chips allow in situ monitoring of biofilm formation under various flow regimes and have better environment control and smaller sample requirements. Flow simulations and experiments with fluorescent particles were used to simulate bacteria flow in the platform cell for calculating flow velocity and direction at the microscale level. The combination of flow analysis and fluorescent strain injection in the cell showed that microtraps placed at the center of the channel were efficient in capturing bacteria at determined positions and to study how flow conditions, especially microvortices, can affect biofilm formation. The microfluidic platform exhibited improved performances in terms of homogeneity and robustness for in vitro biofilm formation. We anticipate the presented platform to be suitable for broad, versatile, and high-throughput biofilm studies at the microscale level. KW - Topographical pattern KW - E. coli KW - Fluorescence KW - Bacteria trapping KW - Particle velocimetry PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-610450 DO - https://doi.org/10.1021/acsbiomaterials.4c00101 SN - 2373-9878 VL - 10 IS - 7 SP - 4626 EP - 4634 PB - ACS Publ. CY - Washington, DC AN - OPUS4-61045 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -