TY - CONF A1 - Oberbeckmann, Sonja T1 - Hunting for pigments in plastic biofilms from the Great Pacific Garbage Patch N2 - Each year, an immense amount of plastic debris enters marine ecosystems, much of which ends up in the Great Pacific Garbage Patch (GPGP). The plastic fragments are home to a diverse community of microorganisms, and while researchers have gained a better understanding of these marine plastic biofilms, we lack insights into the physiology and genomic potential of the bacteria that colonize them. Examining the lifestyle of plastic colonizers from the GPGP is particularly intriguing, as the high concentration of plastics in this accumulation zone might allow for a microbial adaptation to this unique man-made habitat. A range of pigmentation was observed in 67 isolated strains obtained directly from plastic pieces sampled from the GPGP surface water. Sequence comparison between the cultivated bacterial strains and the 16S rRNA gene amplicon dataset confirmed that most of the cultivates could also be captured through DNA-only methods. Whole genome analysis of four taxonomically diverse representatives revealed multiple carotenoid pathways, including those to produce less common glycosylated carotenoids, like sarcinaxanthin glucoside. Further, we identified a potentially new Rhodobacteraceae species containing a photosynthetic gene cluster (PGC). Absorption analysis confirmed the actual production of the carotenoids and bacteriochlorophyll a. Floating plastics represent a habitat with strong UV-light exposure, making the protection with antioxidant carotenoids as well as the ability to use light as an energy source highly beneficial traits for plastic colonizers. Our findings indicate, that the production of pigments is a common adaption mechanism for plastic-associated bacteria, and that plastic biofilms present a so far overlooked source of rare carotenoids and light-harvesting mechanisms. T2 - Annual Conference of The Association for General and Applied Microbiology (VAAM) CY - Göttingen, Germany DA - 10.09.2023 KW - Plastic biofilm KW - Phototrophic bacteria KW - Plastic pollution PY - 2023 AN - OPUS4-58443 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Oberbeckmann, Sonja T1 - The Microplastic Microbiome N2 - Microplastics represent man-made and newly emerging surfaces in our ecosystems, where they interact with microorganisms. The ecosystem in focus of this presentation will be the aquatic environment. It will be portrayed, which microorganisms use microplastics as a habitat, how environmental factors shape this colonization, and why the biodegradation of plastics in the ocean is an overall unlikely process. We will also discuss whether potentially pathogenic microorganisms use microplastics as a raft. Finally, possible adaptation mechanisms of plastic-colonizing microorganisms will be presented, such as the production of photoreactive molecules. The microplastic microbiome has a large potential to harbor so far unknown species with curious traits, representing an exciting research topic for the future. T2 - Geomicrobiological and Geochemical Colloquium, GFZ CY - Potsdam, Germany DA - 20.02.2024 KW - Microplastics KW - Microbiome KW - Biofilm PY - 2024 AN - OPUS4-60203 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Oberbeckmann, Sonja T1 - Microplastic-microbiome interactions in aquatic ecosystems: a complex story N2 - As pervasive and persistent pollutants, microplastics exist alongside diverse microbial communities in nature. These hardy substrates accumulate rich polymeric matrices from their surroundings that in turn offer nutrition and protection to diverse communities and their theatre of activity, representing a new ecological niche. With our work, we aim to establish a holistic understanding of the interactions between microplastics and microorganisms within aquatic systems, and how these interactions shape their surrounding environment. In our research, we combine field sampling with in situ experiments, and apply high-throughput sequencing technologies to 16S genes and whole bacterial genomes. We demonstrate through our studies that biofilm communities exhibit no specificity to plastic polymer type but appear rather to be opportunistic colonizers more strongly shaped by spatial and temporal factors. While the polymer surface does not appear to elicit a selective effect on associated biofilms, our studies show that microplastics might shape communities in a different way. Based on our detection of carotenoid synthesis pathways and photosynthetic gene clusters among plastic biofilms, we postulate this new niche to shape a specific functional toolkit, adaptive among its members as a product of prolonged exposure to UV radiation at the sea’s surface. To fully assess the interactions between microplastics and microorganisms, however, one cannot consider plastics singularly but as a component within a more complex and interconnected system. It is known, for instance, that plastics can sorb significant concentrations of polycyclic aromatic hydrocarbons (PAH) in the environment. We show, in our work, that the PAH sorption patterns of microplastics correlate significantly with the structure of associated biofilm communities. Elevated concentrations of specific PAHs on microplastics coincided with the enrichment of selected taxa reportedly capable of hydrocarbon utilisation as well as a reduced diversity among associated biofilm communities. Here, we present a synthesis of our collective research on microplastic biofilms in the aquatic environment, the factors that shape them, and their interactions with nature. To fully comprehend how microplastics impact ecosystems, the entire substrate must be considered, including all chemicals integrated into the polymeric matrix as well as associated biofilms. T2 - SETAC Europe 35th Annual Meeting CY - Vienna, Austria DA - 11.05.2025 KW - Microplastics KW - Biofilms KW - PAH PY - 2025 AN - OPUS4-63154 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Oberbeckmann, Sonja T1 - The microplastic microbiome – an example for the intersection of biology and material research N2 - Biofilms live on the interface between human-made materials and the environment. Using aquatic plastics as an example, we explore their composition, their interactions with the plastic substrate, and their potentially useful functional roles. The presentation will further discuss the importance of considering plastic-associated pollutants in the investigation of such biofilms. T2 - Microbiological Colloquium ICBM CY - Oldenburg, Germany DA - 10.07.2025 KW - Microplastics KW - Microbiome KW - Biofilm PY - 2025 AN - OPUS4-63836 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Oberbeckmann, Sonja T1 - On the intersection of microbiome and material research: what can be achieved? N2 - Any surface in the environment acts as hotspot for microbial attachment and activity. These biofilms represent the interface between humans and the environment. While in the past biofilms were often seen as disturbance, we now start to understand the enormous potential of beneficial biofilms. They can be used in a broad range of applications and are sources for new microorganisms and traits. After all, biofilms represent a great example for a collaborative lifestyle. T2 - Bioeconomy Changemakers Festival, Hereon CY - Teltow, Germany DA - 14.03.2024 KW - Biofilm KW - Microbiome KW - Sustainability KW - Biosphere KW - Microplastics PY - 2024 AN - OPUS4-60202 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -