TY - JOUR A1 - Steinhäuser, Lorin A1 - Piechotta, Christian A1 - Westphalen, Tanja A1 - Kaminski, Katja T1 - Evaluation, comparison and combination of molecularly imprinted polymer solid phase extraction and classical solid phase extraction for the preconcentration of endocrine disrupting chemicals from representative whole water samples N2 - Estrogens are endocrine disrupting chemicals and of high concerns due to demonstrated harmful effects on the environment and low effect levels. For monitoring and risk assessment, several estrogens were included in the "watch list" of the EU Water Framework Directive which sets very low environmental quality standard (EQS) levels for Estrone (E1) and 17β-Estradiol (E2) of 0.4 ng L−1 and for 17α-Ethinylestradiol (EE2) of 0.035 ng L−1 requiring sensitive detection methods, as well as extensive sample preparation. A sensitive, derivatization-free, isotope dilution calibration HPLC-MS/MS method for a panel of 5 selected estrogens (including the 3 estrogens of the EU WFD watchlist), and a procedure for the reproducible preparation of a representative whole water matrix including mineral water, humic acids and solid particulate matter are presented. These are used in a diligent comparison of classical solid phase extraction (SPE) on hydrophilic-lipophilic balanced (HLB) phase to SPE on an estrogen-specific molecularly imprinted polymer phase (MISPE) for ultra-trace levels of the analytes (1–10 ng L−1). Additionally, a two-step procedure combining HLB SPE disks followed by MISPE is evaluated. The tow-step procedure provides superior enrichment, matrix removal and sample throughput while maintaining comparable recovery rates to simple cartridge SPE. Estimated method quantification limits (MQLs) range from 0.109–0.184 ng L−1 and thus meet EQS-levels for E1 and E2, but not EE2. The representative whole water matrix provides a reproducible comparison of sample preparation methods and lays the foundation for a certified reference material for estrogen analysis. The presented method will serve as the basis for an extended validation study to assess its use for estrogen monitoring in the environment. KW - Estrogens KW - Whole water samples KW - Molecular imprinted polymers KW - EU-WFD PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-563547 DO - https://doi.org/10.1016/j.talo.2022.100163 SN - 2666-8319 VL - 6 SP - 1 EP - 5 PB - Elsevier B.V. CY - Amsterdam, Niederlande AN - OPUS4-56354 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Riedel, Soraya T1 - Tracing toxic fumonisins - Fumonisin sensing by Aspergillus niger Fumonisin Amine Oxidase (AnFAO) and amperometric hydrogen peroxide detection N2 - Fumonisins are a class of toxic secondary metabolites produced by various Fusarium species. The two most important producers of fumonisins are F. verticillioides and F. proliferatum but also Aspergillus niger is known to produce fumonisins. Most frequently they occur on maize, but also other grains can be contaminated with this group of mycotoxins. Exposure to fumonisins by dietary intake can have serious health effects on farm animals such as equine leukoencephalomalacia and porcine pulmonary oedema and is associated with neural tube defects and esophageal cancer in humans. Thus, the European Commission sets legal limits for fumonisins in foodstuffs. The detection of fumonisins is frequently performed in laboratories by chromatographic methods, which are costly and require trained personnel. Simplifying the analysis is therefore a major goal using portable detection systems. Electrochemical enzymatic biosensors offer great promise to meet this demand. Here we report for the first time an enzymatic fumonisin sensing approach with amperometric detection. For this purpose, an Aspergillus niger fumonisin amine oxidase (AnFAO) catalyzing the oxidative deamination of fumonisins, producing hydrogen peroxide, was recombinantly produced in E. coli. For the first time, the specific enzyme activity of AnFAO was determined using a horseradish peroxidase-based fluorescence assay. It was found that the specific activity of AnFAO using 20 μM Fumonisin B1 as substrate is higher than for 20 μM Fumonisin B2 with 0.122 U mg-1 and 0.058 U mg-1, respectively. It was possible to show a dependence of enzyme activity with enzyme – and substrate-concentration. For fumonisin B1 detection, the enzyme was coupled covalently to magnetic particles and the enzymatically produced H2O2 was detected amperometrically in a flow injection system using Prussian blue carbon electrodes. The developed method allows to quantify fumonisin B1 concentrations down to 1.5 µM and demonstrates that the recombinantly produced AnFAO was able to deaminate different concentrations of fumonisin even in immobilized form. Thus, this enzyme is well suited to develop an enzyme based electrochemical biosensor for fumonisin contaminated food and feed. T2 - Posterschau Adlershofer Forschungsforum CY - Berlin, Germany DA - 11.11.2022 KW - Biosensor KW - Amperometry KW - Mycotoxins KW - Electrochemical sensor KW - Recombinant protein expression PY - 2022 N1 - Geburtsname von Riedel, Soraya: Höfs, S. - Birth name of Riedel, Soraya: Höfs, S. AN - OPUS4-56248 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Döring, Sarah T1 - Cost-effective method for full-length sequencing of monoclonal antibodies N2 - With the development of hybridoma technology, monoclonal antibodies are increasingly important in therapeutic and analytical applications. For recombinant expression in mammalian cells, knowledge of the variable regions of both, heavy (VH) and light (VL) chain, is a necessary prerequisite for generating expression plasmids. Furthermore, cloning antibody sequences including constant regions CH1 to CH3 and CL reduces impact of hybridoma cell loss and associated full natural antibody sequence leakage. Here, we show a cost-effective workflow for amplification of IgG antibody variable regions in combination with advanced methods for full-length cloning of monoclonal antibodies. T2 - Adlershofer Forschungsforum CY - Berlin, Germany DA - 11.11.2022 KW - Monoclonal Antibodies KW - DNA-Sequencing KW - PCR PY - 2022 AN - OPUS4-56275 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Frenzel, Olivia T1 - Identification of Metabolites and Transformation Products of Bisphenols N2 - Bisphenol A (BPA) is widely used in Polycarbonate (PC), Polyacrylic resins (PAR), Polysulfones (PSU), Epoxy resins (ER), and Polyetherimides (PEI). It is also used in recycled Polyvinyl chloride (PVC) [1–3]. These BPA-containing materials have a wide area of application, especially outside. All outdoor applications are exposed to a variety of environmental impacts, like temperature, solar radiation (physical influences), chemical influences (rain or ozone), biological influences (microorganisms), and mechanical influences (hail, sand). These impacts are damaging and aging the material which can be followed by leaching or migration of pollutants like Bisphenol A into the environment. Understanding the fate and behavior of the released pollutants is very important. Therefore, different transformation products of selected Bisphenols will be generated and analyzed. T2 - 33rd International Symposium on Chromatography – ISC 2022 CY - Budapest, Hungary DA - 18.09.2022 KW - Environment KW - Transformation products KW - Bisphenols KW - Metabolites KW - Wastewater PY - 2022 AN - OPUS4-56202 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Frenzel, Olivia T1 - Identification of transformation products and metabolites of selected Bisphenols N2 - Bisphenol A (BPA) is widely used in many Polymers. Many outdoor applications are made from BPA-based materials which are exposed to a variety of environmental impacts, like temperature, solar radiation, rain, and others. This could lead to damaging and aging of the material which might cause leaching or migration of pollutants into the environment. To understand the fate and behavior different transformation products of selected Bisphenols will be generated and analyzed. T2 - Umwelt2022 CY - Emden, Germany DA - 05.09.2022 KW - Environment KW - Bisphenols KW - Transformation products KW - Metabolites KW - Wastewater PY - 2022 AN - OPUS4-56203 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Braymer, Joseph J. T1 - Cytosolic Fe/S Protein Biogenesis -a focus on [2Fe-2S] proteins- N2 - Iron-Sulfur (Fe/S) protein biogenesis in the cytosol is an essential process for the proper maturation of many proteins and enzymes required for cellular function. Between the two types of Fe/S cofactors, recent work has been uncovering the dependencies of [2Fe-2S] cluster on the known Fe/S protein biogenesis machineries and how they may be trafficked in the cytosol. New insights will here be discussed in addition to the discovery of a newly identified cytosolic [2Fe-2S] binding protein. T2 - DFG SPP1927 Final Meeting CY - Potsdam, Germany DA - 29.09.2024 KW - Metalloproteins KW - Iron-sulfur clusters KW - Spectroscopy KW - Yeast PY - 2024 AN - OPUS4-61516 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Wittwer, Philipp T1 - Results of ILC Data Treatment N2 - Results of the interlaboratory comparison study for data treatment were presented. They show, that nearly all participants found all the problems in the data. However, only a few corrected the problems, therefore making it one possible point to focus on in the knowledge sharing program. T2 - AGM POLMO Meeting 2024 CY - Paris, France DA - 21.05.2024 KW - JNP POLMO KW - ILC KW - Ringversuch PY - 2024 AN - OPUS4-60166 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Guigues, Nathalie A1 - Uysal, Emrah A1 - Raveau, Sandrine A1 - Magar, Jérémie A1 - Billon, Gabriel A1 - Kahiluoto, Joonas A1 - Schneider, Rudolf A1 - Liv, Lokman A1 - Gençtürk Tosun, Serap A1 - Canteau, Gaëlle A1 - Lalere, Béatrice T1 - Insights on the validation of alternative tools for water quality monitoring: the case of on-site test kits, portable devices and continuous measuring devices N2 - Alternative Tools (AT) such as on-site test kits, on-site portable devices and continuous measuring devices, are useful to improve water quality assessment under EU directives, and water treatment processes, thus contributing to improving water management, as well as get insights on the dynamic of pollutants within water bodies. Although these tools have clear advantages (e.g. fast response allowing for real-time monitoring, ease-of-use, lower cost), they are perceived as less reliable than conventional analytical methods. Their alternative nature, innovative status, and non-standard operation mode require specific validation strategies that differ significantly from those of conventional analytical methods. Nevertheless, the validation of ATs, especially on-site test kits, portable devices and continuous measuring devices for water quality monitoring is crucial to support their acceptance, promote their use and make their application sustainable. In this paper, a validation procedure in 4 steps is proposed: (1) Comprehensive description of the AT; (2) Assessment of intrinsic metrological performance and operational factors within a single laboratory; (3) Assessment of inter-laboratory performances through an inter-laboratory comparison and, (4) Demonstration of the equivalence of results between the AT and a reference method. This paper discusses each step of the validation procedure, and examples to illustrate critical issues are provided. KW - Biosensoren KW - Schnelltests KW - Validierung PY - 2024 DO - https://doi.org/10.1007/s00769-023-01570-x SN - 0949-1775 VL - 29 IS - 7 SP - 163 EP - 173 PB - Springer Science and Business Media LLC CY - Berlin AN - OPUS4-60230 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Gregório, Bruno J.R. A1 - Ramos, Inês I. A1 - Marques, Sara S. A1 - Barreiros, Luísa A1 - Magalhães, Luís M. A1 - Schneider, Rudolf A1 - Segundo, Marcela A. T1 - Microcarrier-based fluorescent yeast estrogen screen assay for fast determination of endocrine disrupting compounds N2 - The presence of endocrine-disrupting compounds (EDCs) in water poses a significant threat to human and animal health, as recognized by regulatory agencies throughout the world. The Yeast Estrogen Screen (YES) assay is an excellent method to evaluate the presence of these compounds in water due to its simplicity and capacity to assess the bioaccessible forms/fractions of these compounds. In the presence of a compound with estrogenic activity, Saccharomyces cerevisiae cells, containing a lacZ reporter gene encoding the enzyme β-galactosidase, are induced, the enzyme is synthesised, and released to the extracellular medium. In this work, a YES-based approach encompassing the use of a lacZ reporter gene modified strain of S. cerevisiae, microcarriers as solid support, and a fluorescent substrate, fluorescein di-β-D-galactopyranoside, is proposed, allowing for the assessment of EDCs’ presence after only 2 h of incubation. The proposed method provided an EC50 of 0.17 ± 0.03 nM and an LLOQ of 0.03 nM, expressed as 17β-estradiol. The assessment of different EDCs provided EC50 values between 0.16 and 1.2 × 103 nM. After application to wastewaters, similar results were obtained for EDCs screening, much faster, compared to the conventional 45 h spectrophotometric procedure using a commercial kit, showing potential for onsite high-throughput screening of environmental contamination. KW - Biosensoren KW - YES assay KW - Endokrine Disruptoren PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602315 DO - https://doi.org/10.1016/j.talanta.2024.125665 VL - 271 SP - 1 EP - 7 PB - Elsevier B.V. CY - Amsterdam AN - OPUS4-60231 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Braymer, Joseph J. A1 - Stehling, Oliver A1 - Stümpfig, Martin A1 - Rösser, Ralf A1 - Spantgar, Farah A1 - Blinn, Catharina M. A1 - Mühlenhoff, Ulrich A1 - Pierik, Antonio J. A1 - Lill, Roland T1 - Requirements for the biogenesis of [2Fe-2S] proteins in the human and yeast cytosol N2 - The biogenesis of iron–sulfur (Fe/S) proteins entails the synthesis and trafficking of Fe/S clusters, followed by their insertion into target apoproteins. In eukaryotes, the multiple steps of biogenesis are accomplished by complex protein machineries in both mitochondria and cytosol. The underlying biochemical pathways have been elucidated over the past decades, yet the mechanisms of cytosolic [2Fe-2S] protein assembly have remained ill-defined. Similarly, the precise site of glutathione (GSH) requirement in cytosolic and nuclear Fe/S protein biogenesis is unclear, as is the molecular role of the GSH-dependent cytosolic monothiol glutaredoxins (cGrxs). Here, we investigated these questions in human and yeast cells by various in vivo approaches. [2Fe-2S] cluster assembly of cytosolic target apoproteins required the mitochondrial ISC machinery, the mitochondrial transporter Atm1/ABCB7 and GSH, yet occurred independently of both the CIA system and cGrxs. This mechanism was strikingly different from the ISC-, Atm1/ABCB7-, GSH-, and CIA-dependent assembly of cytosolic–nuclear [4Fe-4S] proteins. One notable exception to this cytosolic [2Fe-2S] protein maturation pathway defined here was yeast Apd1 which used the CIA system via binding to the CIA targeting complex through its C-terminal tryptophan. cGrxs, although attributed as [2Fe-2S] cluster chaperones or trafficking proteins, were not essential in vivo for delivering [2Fe-2S] clusters to either CIA components or target apoproteins. Finally, the most critical GSH requirement was assigned to Atm1-dependent export, i.e. a step before GSH-dependent cGrxs function. Our findings extend the general model of eukaryotic Fe/S protein biogenesis by adding the molecular requirements for cytosolic [2Fe-2S] protein maturation. KW - Biokorrosion KW - Hydrogenasen KW - Microbially Induced Corrosion PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602328 DO - https://doi.org/10.1073/pnas.2400740121 SN - 0027-8424 VL - 121 IS - 21 SP - 1 EP - 12 PB - Proceedings of the National Academy of Sciences CY - Washington D.C. AN - OPUS4-60232 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Proll, Günther A1 - Seidel, Michael A1 - Schneider, Rudolf T1 - Moderne bioanalytische Methoden für die schnelle Quantifizierung von Mikroschadstoffen und Pathogenen in Wasser N2 - Analytische Methoden für die Quantifizierung von Mikroschadstoffen (Synonym für Spurenstoffe) und Pathogenen im Wasser sind eine Grundvoraussetzung für die Umsetzung des Ziels Nr. 6 für Nachhaltige Entwicklung der UN, weltweit sauberes Wasser zur Verfügung zu stellen. Dafür sind schnelle, einfach zu bedienende und kostengünstige Überwachungssysteme notwendig. Antikörperbasierte Biosensoren haben das Potential, z.B. die Eliminationsleistung bezüglich kleiner organischer Moleküle durch die vierte Reinigungsstufe von Kläranlagen vor Ort zu überwachen. Darüber hinaus kommt modernen bioanalytischen Verfahren bei der Quantifizierung von Pathogenen eine immer wichtigere Rolle zu. Neben einer Bestandsaufnahme zu diesen Themen ist es das Ziel dieses Beitrags, die Anwendungsbarrieren von Biosensoren für die Wasseranalytik von Mikroschadstoffen abbauen zu helfen und die Vorzüge moderner bioanalytischer Methoden für die Quantifizierung von Pathogenen aufzuzeigen. KW - Biosensoren KW - Antikörper KW - Abwasser PY - 2024 SN - 1618-3258 VL - 30 IS - 2 SP - 66 EP - 70 PB - GDCh CY - Weinheim AN - OPUS4-60233 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Schmidt, Stephan A1 - Hoffmann, Holger A1 - Garbe, Leif-Alexander A1 - Harrer, Andrea A1 - Steiner, Markus A1 - Himly, Martin A1 - Schneider, Rudolf T1 - Re-assessment of monoclonal antibodies against diclofenac for their application in the analysis of environmental waters N2 - The non-steroidal anti-inflammatory drug (NSAID) diclofenac (DCF) is an important environmental contaminant occurring in surface waters all over the world, because, after excretion, it is not adequately removed from wastewater in sewage treatment plants. To be able to monitor this pollutant, highly efficient analytical methods are needed, including immunoassays. In a medical research project, monoclonal antibodies against diclofenac and its metabolites had been produced. Based on this monoclonal anti-DCF antibody, a new indirect competitive enzyme-linked immunosorbent assay (ELISA) was developed and applied for environmental samples. The introduction of a spacer between diclofenac and the carrier protein in the coating conjugate led to higher sensitivity. With a test midpoint of 3 mg L−1 and a measurement range of 1–30 mg L−1, the system is not sensitive enough for direct analysis of surface water. However, this assay is quite robust against matrix influences and can be used for wastewater. Without adjustment of the calibration, organic solvents up to 5%, natural organic matter (NOM) up to 10 mg L−1, humic acids up to 2.5 mg L−1, and salt concentrations up to 6 g L−1 NaCl and 75 mg L−1 CaCl2 are tolerated. The antibody is also stable in a pH range from 3 to 12. Cross-reactivity (CR) of 1% or less was determined for the metabolites 40-hydroxydiclofenac (40-OH-DCF), 5-hydroxydiclofenac (5-OH-DCF), DCF lactam, and other NSAIDs. Relevant cross-reactivity occurred only with an amide derivative of DCF, 6-aminohexanoic acid (DCF-Ahx), aceclofenac (ACF) and DCF methyl ester (DCF-Me) with 150%, 61% and 44%, respectively. These substances, however, have not been found in samples. Only DCF-acyl glucuronide with a cross-reactivity of 57% is of some relevance. For the first time, photodegradation products were tested for cross-reactivity. With the ELISA based on this antibody, water samples were analysed. In sewage treatment plant effluents, concentrations in the range of 1.9–5.2 mg L−1 were determined directly, with recoveries compared to HPLC-MS/MS averaging 136%. Concentrations in lakes ranged from 3 to 4.4 ng L−1 and were, after pre-concentration, determined with an average recovery of 100% KW - Antikörper KW - Immunoassay KW - Wasser PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602280 DO - https://doi.org/10.1039/d3ay01333b VL - 16 IS - 21 SP - 3349 EP - 3363 PB - Royal Society of Chemistry (RSC) CY - London AN - OPUS4-60228 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Piechotta, Christian T1 - Structural Investigations of Transformation Products of the Anticoagulant Drug and Rodenticide Warfarin N2 - Warfarin (Coumadin) is one of the most popular anticoagulant drugs used as a therapeutic in humans to prevent thrombosis, atrial fibrosis, and fibrillation since the 1950s. Because of its ability to hinder blood coagulation by blocking vitamin K-depending carboxylation of blood clotting precursors, it is also used as a rodenticide worldwide. Until today it has been partially substituted by far more potent anticoagulant rodenticides (ARs), so-called superwarfarins. Numerous studies are confirming secondary and tertiary poisoning with ARs in non-target-animals and wildlife. Up to now, relatively little is known about persistence and toxicity of ARs and naturally, nor technically formed transformation products (TPs) in the environment, food chain, and transformations occurring during wastewater treatment. Herein, we present liquid and gas chromatographic methods coupled to (high-resolution) mass spectrometry for the analysis of warfarin’s transformation products. Methodologies such as UV-irradiation, ozonation, and chlorination were utilised to simulate technical water treatment. Resulting compounds were elucidated and examined by numerous analytical methods. Moreover, the oxidative phase I metabolism was mimicked by an electrochemical flow cell to synthesise and confirm major metabolites. The further aim is the toxicological assessment of all substances formed, as well as, the quantification of warfarin and its TPs under environmentally relevant conditions employing the introduced methods. T2 - SETAC 2024 CY - Sevilla, Spain DA - 05.06.2024 KW - Warfarin PY - 2024 AN - OPUS4-61898 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Piechotta, Christian T1 - Mass spectrometric elucidation of electron ionization induced fragmentation pathways of methylated warfarin and selected hydroxylated species N2 - Warfarin (Coumadin) is one of the most popular anticoagulant drugs used as a therapeutic in humans to prevent thrombosis, atrial fibrosis, and fibrillation since the 1950s. Because of its ability to hinder blood coagulation by blocking vitamin K-depending carboxylation of blood clotting precursors, it is also used as a rodenticide worldwide. Until today it has been partially substituted by far more potent anticoagulant rodenticides (ARs), so-called superwarfarins. Numerous studies are confirming secondary and tertiary poisoning with ARs in non-target-animals and wildlife. Up to now, relatively little is known about persistence and toxicity of ARs and naturally, nor technically formed transformation products (TPs) in the environment, food chain, and transformations occurring during wastewater treatment. Herein, we present liquid and gas chromatographic methods coupled to (high-resolution) mass spectrometry for the analysis of warfarin’s transformation products. Methodologies such as UV-irradiation, ozonation, and chlorination were utilised to simulate technical water treatment. Resulting compounds were elucidated and examined by numerous analytical methods. Moreover, the oxidative phase I metabolism was mimicked by an electrochemical flow cell to synthesise and confirm major metabolites. The further aim is the toxicological assessment of all substances formed, as well as, the quantification of warfarin and its TPs under environmentally relevant conditions employing the introduced methods. T2 - SETAC 2024 CY - Sevilla, Spain DA - 05.06.2024 KW - Mass spectrometry KW - Warfarin PY - 2024 AN - OPUS4-61902 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Braymer, Joseph T1 - Cytosolic Fe/S Protein Biogenesis -a new [2Fe-2S] protein- N2 - Iron-Sulfur (Fe/S) protein biogenesis in the cytosol is an essential process for the proper maturation of many proteins and enzymes required for cellular function. Between the two types of Fe/S cofactors, recent work has been uncovering the dependencies of [2Fe-2S] cluster on the known Fe/S protein biogenesis machineries and how they may be trafficked in the cytosol. New insights will here be discussed in addition to the discovery of a newly identified cytosolic [2Fe-2S] binding protein. T2 - Invited talk at University of Potsdam, Institute of Biochemistry and Biology CY - Potsdam, Germany DA - 29.11.2024 KW - Metalloproteins KW - Iron-sulfur clusters PY - 2024 AN - OPUS4-62144 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Braymer, Joseph J. A1 - Knauer, L. A1 - Crack, J. C. A1 - Oltmanns, J. A1 - Heghmanns, M. A1 - Soares, J. C. A1 - Le Brun, N. E. A1 - Schünemann, V. A1 - Kasanmascheff, M. T1 - Yeast [FeFe]-hydrogenase-like protein Nar1 can bind not only two [4Fe-4S] clusters but also a [2Fe-2S] cluster N2 - Nar1 is an essential eukaryotic protein proposed to function as an iron-sulfur (Fe/S) cluster trafficking factor in the cytosolic iron-sulfur assembly (CIA) machinery. However, such a role has remained unclear due to difficulties in purifying adequate amounts of cofactor-bound protein. The [FeFe]-hydrogenase-like protein has two conserved binding sites for [4Fe-4S] clusters, one of which is predicted to be a labile site for cluster transfer to downstream targets. Here, we report a new preparation procedure for Nar1 that facilitated studies by UV-Vis, EPR, and Mössbauer spectroscopies, along with native mass spectrometry. Nar1 recombinantly produced in E. coli contained a [4Fe-4S] cluster, bound presumably at site 1, along with an unexpected [2Fe-2S] cluster bound at an unknown site. Fe/S reconstitution reactions installed a second [4Fe-4S] cluster at site 2, leading to protein with three Fe/S cofactors. Strikingly, one [4Fe-4S] cluster was rapidly destroyed by molecular oxygen, potentially linking Nar1 oxygen sensitivity to phenotypes observed previously in vivo. These advances now allow for the pursuit of in vitro Fe/S cluster transfer assays, which will shed light on Fe/S trafficking by CIA components and how they may facilitate the insertion of [4Fe-4S] and potentially [2Fe-2S] clusters into target proteins in the cytosol. KW - Iron sulfur cluster KW - Hydrogenase-like proteins KW - Metalloprotein PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-628217 DO - https://doi.org/10.1101/2025.03.25.644927 SP - 1 EP - 14 AN - OPUS4-62821 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Singh, Chandan A1 - Thiele, M. A1 - Dathe, A. A1 - Thamm, S. A1 - Henkel, T. A1 - Sumana, G. A1 - Fritzsche, W. A1 - Czáki, A. T1 - Tri-sodium citrate stabilized gold nanocubes for plasmonic glucose sensing N2 - We report a two-step process for the immobilization of gold nanocubes (Au-NCs) on a glass surface using a combination of extraction and exchange reaction using poly (sodium 4-styrenesulfonate) (PSS) and trisodium citrate (TSC). Cetyltrimethylammonium chloride (CTAC) stabilized gold nanocubes (CTAC/Au-NCs) synthesized by a microfluidic synthesis procedure were successfully deposited on silane-modified glass substrate after extraction of excess CTAC using chloroform followed by exchange of CTAC to TSC on the surface of Au-NCs. Further, TSC/Au-NCs were found to be highly stable and suitable for microfluidic sensing of different glucose concentrations using localized surface plasmon resonance (LSPR) spectroscopy offering an improved sensitivity (126.37 nm/RIU). KW - Gold nanocubes KW - Surfactant KW - Immobilization PY - 2021 DO - https://doi.org/10.1016/j.matlet.2021.130655 SN - 0167-577X SN - 1873-4979 VL - 304 SP - 1 EP - 4 PB - Elsevier CY - New York, NY AN - OPUS4-53216 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Ecke, Alexander A1 - Bell, Jérémy A1 - Schneider, Rudolf T1 - A three-dimensional microfluidic flow cell and system integration for improved electrochemical substrate detection in HRP/TMB-based immunoassays N2 - Immunoassays, based on the recognition and capture of analytes by highly selective antibodies, are now used extensively in all areas of diagnostics, but the challenge is to further integrate them into online sensors. To improve the transition from laboratory immunoassays to immunosensors, we have developed a complete flow system, based on a microfluidic core flow cell to enable automated detection of one of the most commonly used immunoassay substrates, TMB, by chronoamperometry. The architecture and fluidic optimisation of the system showed that a specially designed 3D flow cell allows higher flow rates (500 μL min−1) than a standard enlarged microfluidic channel (50 μL min−1) resulting in a significantly shorter detection time of 30 seconds per sample and making the system more robust against interferences due to bubble formation in the chip. The electrochemical measurements showed an improved signal-to-noise ratio (SNR) and thus higher sensitivity for a model immunoassay for diclofenac (SNR = 59), compared to the analytical performance of a conventional laboratory microplate-based assay with optical detection (SNR = 19). In general, this system facilitates the conversion of any conventional immunoassay into an immunosensor with automatic and continuous detection. KW - Microfluidic KW - Immunoassay KW - Electrochemical KW - Mikrofluidik KW - Immunassay KW - Elektrochemie PY - 2023 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-580159 DO - https://doi.org/10.1039/d3sd00095h VL - 2 SP - 887 EP - 892 PB - Royal Society of Chemistry CY - London, United Kingdom AN - OPUS4-58015 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf T1 - Electrochemical immunosensing with a 3-dimensional microfluidic flow cell N2 - Immunoassays, based on analyte recognition and capture by highly selective antibodies with high affinity, are intensively used in all fields of laboratory diagnostics and in screen-ings of food and environmental samples. Yet, for many purposes, online sensors are desir-able, and, in principle, all immunoassay tech-niques can be integrated into lab-on-chip set-ups that can work as continuous monitoring devices. Yet, the challenge remains to devel-op platforms and elements that are fit for a quick transition of laboratory microplate as-says to immunosensors. T2 - European Biosensor Symposium CY - Aachen, Germany DA - 28.08.2023 KW - Biosensor KW - Antibodies KW - Microfluidics KW - Electrochemical detection PY - 2023 AN - OPUS4-59240 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Ecke, Alexander T1 - An Immunosensor for Pharmaceutical Contaminants in Water Supply N2 - Contamination of drinking water with pharmaceuticals is an emerging problem and a potential health threat. Immunochemical methods based on the binding of the analyte to specific antibodies enable fast & cost-effective on-site analyses. Magnetic bead-based immunoassays (MBBAs) allow for implementation into an immunosensor for online testing. Particles are prepared by either coupling the analyte molecule (diclofenac) or the respective antibody (amoxicillin) to the surface. For miniaturization, detection is performed electrochemically (chronoamperometry) on a microfluidic chip. The developed immunosensor will enable detection of pharmaceuticals directly in water supply pipes. T2 - Analytica Conference CY - München, Germany DA - 21.06.2022 KW - Immunosensor KW - Magnetic Particles KW - Microfluidics KW - Amperometry KW - Diclofenac KW - Amoxicillin PY - 2022 AN - OPUS4-55381 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Roesch, Philipp A1 - Vogel, Christian A1 - Wittwer, Philipp A1 - Huthwelker, T. A1 - Borca, C. A1 - Sommerfeld, Thomas A1 - Kluge, Stephanie A1 - Piechotta, Christian A1 - Kalbe, Ute A1 - Simon, Franz-Georg T1 - Taking a Look at the Surface: µ-XRF Mapping and Fluorine K-edge µ-XANES Spectroscopy of Organofluorinated Compounds in Environmental Samples and Consumer Products N2 - For the first time, µ-X-ray fluorescence (µ-XRF) mapping combined with fluorine K-edge µ-X-ray absorption near-edge structure (µ-XANES) spectroscopy was applied to depict per- and polyfluoroalkyl substances (PFAS) contamination and inorganic fluoride in samples concentrations down to 100 µg/kg fluoride. To demonstrate the matrix tolerance of the method, several PFAS contaminated soil and sludge samples as well as selected consumer product samples (textiles, food contact paper and permanent baking sheet) were investigated. µ-XRF mapping allows for a unique element-specific visualisation at the sample surface and enables localisation of fluorine containing compounds to a depth of 1 µm. Manually selected fluorine rich spots were subsequently analysed via fluorine K-edge µ-XANES spectroscopy. To support spectral interpretation with respect to inorganic and organic chemical distribution and compound class determination, linear combination (LC) fitting was applied to all recorded µ-XANES spectra. Complementarily, solvent extracts of all samples were target-analysed via LC-MS/MS spectrometry. The detected PFAS sum values range from 20 to 1136 µg/kg dry weight (dw). All environmentally exposed samples revealed higher concentration of PFAS with a chain length >C8 (e.g. 580 µg/kg dw PFOS for Soil1), whereas the consumer product samples showed a more uniform distribution with regard to chain lengths from C4 to C8. Independent from quantified PFAS amounts via target analysis, µ-XRF mapping combined with µ-XANES spectroscopy was successfully applied to detect both point-specific concentration maxima and evenly distributed surface coatings of fluorinated organic contaminants in the corresponding samples. KW - PFAS KW - XRF KW - LC-MS/MS KW - XANES KW - Fluoride KW - Soil PY - 2023 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-576109 DO - https://doi.org/10.1039/D3EM00107E SN - 2050-7887 SP - 1 EP - 12 PB - Royal Society of Chemistry AN - OPUS4-57610 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Kalbe, Ute A1 - Piechotta, Christian A1 - Bandow, Nicole T1 - Comparing PFAS analysis in batch leaching and column leaching tests N2 - Laboratory leaching tests are tools to assess the mobility of environmental contaminants released from granular materials. Comparative leaching tests were performed using four PFAS-contaminated soils whose concentration patterns of 10 selected perfluoroalkyl and polyfluoroalkyl substances (PFAS) differed due to the two types of contamination sources. This study aimed to evaluate the equivalence of two usual laboratory-scale leaching test procedures, batch and column percolation tests, at liquid-to-solid ratios (L/S) of 2 l/kg, which is the current practice within the German assessment framework, and 10 l/kg (relevant for some EU regulations such as the landfill directive). The differences between the replicates of leaching tests investigating PFAS were smaller for column percolation tests than for batch tests, probably mainly due to the greater sample size and the better representativeness of the sample portion analyzed. It was observed that batch tests overestimate the release of shorter-chain PFAS, whereby the effect was greater with carboxylic than with sulfonic acids. Currently, the limits of detection of analyses given by the DIN standard with regard to PFCA and PFSA in soils are partly not sufficient to detect very low contents, whereas the detection of selected PFCA and PFSA in eluates is more sensitive, in accordance with the available standards. This results in limitations when calculating mass balances. KW - PFAS KW - Leaching KW - Column percolation test KW - Batch test KW - Soil PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-618187 DO - https://doi.org/10.1007/s11356-024-35510-0 SN - 1614-7499 VL - 31 IS - 57 SP - 65233 EP - 65251 PB - Springer Science and Business Media LLC AN - OPUS4-61818 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf T1 - Electrochemical immunosensing with a 3-dimensional microfluidic cell N2 - The flash presentation give a quick overview of the work performed. T2 - European Biosensor Symposium CY - Aachen, Germany DA - 28.08.2023 KW - Biosensors KW - microfluidics KW - antibodies KW - Electrochemical detection PY - 2023 AN - OPUS4-59202 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Konthur, Zoltán T1 - Tracking Human-Derived Contaminants in Wastewater: ELISA-Based Detection of Anthropogenic Markers in Samples from German Treatment Plants N2 - Wastewater-based epidemiology (WBE) plays a key role in pandemic management as an early warning system and a tool for guiding interventions. In Germany, combined sewer systems are prevalent, leading to fluctuations in wastewater volume and composition due to rainwater inflow, especially through street drains. This variability complicates the quantitative measurement of pathogens and pollutants in wastewater. While human excretion provides constant inputs, these parameters are often non-specific, lost, or degraded during transport. In contrast, pharmaceuticals excreted by humans, such as carbamazepine and diclofenac, as well as consumed caffeine, are fairly stable and serve as "anthropogenic markers." The simultaneous detection of these markers aids in normalizing WBE studies. Antibody-based methods, particularly Enzyme-Linked Immunosorbent Assays (ELISA), offer a cost-effective alternative to complex chromatographic techniques for monitoring anthropogenic markers. They demonstrate superior normalization quality compared to the frequently used quantitative PCR-based marker Pepper mild mottle virus (PMMoV). T2 - ANAKON 2025 CY - Leipzig, Germany DA - 10.03.2025 KW - Immunoassay KW - Spurenstoffe KW - Carbamazepin KW - anthropogener Marker KW - Koffein PY - 2025 AN - OPUS4-63494 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Konthur, Zoltán T1 - Enzyme-Based Electrochemical Detection of Fumonisins Applying Amperometric Sensing N2 - Fumonisins represent a class of toxic secondary metabolites produced primarily by Fusarium species, notably F. verticillioides and F. proliferatum, though Aspergillus niger can also produce these mycotoxins. They are most commonly found contaminating maize, but other grains are also at risk. Dietary exposure to fumonisins poses serious health risks to both humans and livestock, prompting the European Commission to set regulatory limits on their presence in food and animal feed. Traditional detection methods, such as chromatography, are often costly, are laboratory based and require specialized expertise. To address the need for simpler, more accessible detection methods, portable electrochemical biosensors present a promising solution. In this study, we introduce a novel enzymatic approach for fumonisin detection using amperometric sensing. Here, a recently discovered fumonisin amine oxidase (AnFAO) from Aspergillus niger, which catalyses the oxidative deamination of fumonisins and generates hydrogen peroxide, was produced recombinantly in Escherichia coli. In our hands, the enzyme exhibited higher specific activity toward Fumonisin B1 compared to Fumonisin B2 at the same substrate concentration (0.0037 U/mg and 0.0014 U/mg at 25 µM substrate, respectively). We demonstrated that enzyme activity correlates with both enzyme and substrate concentrations. To detect Fumonisin B1, the enzyme was covalently attached to magnetic particles, and hydrogen peroxide production was measured amperometrically in a flow injection system with Prussian blue carbon electrodes. This method enabled the quantification of Fumonisin B1 concentrations as low as 1.5 µM and proved that recombinant AnFAO effectively deaminated fumonisins even in its immobilized form. These results highlight AnFAO’s potential for developing an enzyme-based electrochemical biosensor to detect fumonisin contamination in food and feed products. T2 - ANAKON 2025 CY - Leipzig, Germany DA - 10.03.2025 KW - Immunoassay KW - Mycotoxin KW - Electrochemistry KW - Antibody KW - Biosensor PY - 2025 AN - OPUS4-63496 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf A1 - Konthur, Zoltán T1 - Bestimmung von anthropogenen Markerkonzentrationen im Abwasser mittels eines antikörperbasierten Verfahrens (ELISA) N2 - Im Rahmen des AMELAG Projektes wurden im Auftrag des Umweltbundesamtes (VH1804) unterschiedliche anthropogene Marker in Abwasserproben aus Brandenburg und Mecklenburg-Vorpommern gemessen. In dieser Präsentation wurden einige Ergebnisse vorgestellt. T2 - AMELAG Abschlussveranstaltung am Robort-Koch-Institut CY - Berlin, Germany DA - 13.12.2024 KW - Östron KW - Koffein KW - Carbamazepin KW - Clarithromycin PY - 2024 AN - OPUS4-62194 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Konthur, Zoltán T1 - Bundesweite Bestimmung anthropogener Marker im Rohabwasser mittels Immunoassays N2 - Die von der Europäischen Kommission im Jahr 2021 empfohlene, systematische Abwasserüberwachung mittels PCR-Techniken wird als ein wirksames Frühwarnsystem für künftige Pandemien durch Viren und andere Krankheitserreger betrachtet. Ein generelles Problem bei jeder quantitativen Messung von Parametern im Abwasser ist die starke Schwankung des Abwasservolumens und seiner Zusammensetzung im Tages- und Jahreszeitenverlauf. Um die Konzentrationsbestimmungen von Krankheitserregern im Abwasser in Korrelation mit menschlichen Einträgen setzen zu können, könnten sog. "anthropogene Marker" eine herausragende Rolle spielen, deren Eintrag ins Abwasser menschlichen Ursprungs sind. Im Projekt werden mittels ELISA die Konzentrationen ausgewählter anthropogener Marker in deutschlandweit gesammelten Abwasserproben erhoben und analysiert. Die Messergebnisse zeigen eindeutige Standortunterschiede auch in Abhängigkeit der Kläranlagengröße und vorhandener Indirekteinleiter. Die Untersuchungen zeigen, dass nicht alle anthropogene Marker an allen Standorten für eine Normalisierung von PCR-Daten für epidemiologische Untersuchungen verwendbar sind. T2 - Wasser 2024 (Jahrestagung der Wasserchemischen Gesellschaft der GDCh) CY - Limburg an der Lahn, Germany DA - 06.05.2024 KW - Diclofenac KW - Koffein KW - Carbamazepin KW - Isolithocholsäure KW - Immunoassay PY - 2024 AN - OPUS4-60991 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Exner, T. T1 - Evaluation anthropogener Marker als Normalisierungsfaktoren für die SARS-CoV-2 Abwassersurveillance zur epidemiologischen Lagebewertung N2 - Im Rahmen der weltweiten Corona-Pandemie fordert die EU-Kommission seit März 2021 die systematische Erfassung und Überwachung von SARS-CoV-2 über das Abwasser, welche der Entscheidungsfindung bezüglich bevölkerungsbezogener Maßnahmen dienen soll. Hierbei können Trendanalysen für die epidemiologische Lagebewertung abgeleitet werden, sofern ein großer Anteil des kommunalen Abwassers der Bevölkerung durch das Monitoring abdeckt wird. Die Datenerhebung erfolgt somit unabhängig vom individuellen Test- und Meldeverhalten der Bevölkerung. Eine bedeutende Herausforderung bei der Bestimmung der Gensequenzen mittels polymerase chain reaction (PCR) stellen standortabhängige Faktoren des Einzugsgebietes sowie Schwankungen der Durchflussrate und der Abwasserzusammensetzung dar. Zu den möglichen Ursachen zählen Verdünnungseffekte durch Regen- und Schmelzwasser, Größenunterschiede des kommunalen Entwässerungssystems, Veränderungen der Demografie und Zuflüsse von Indirekteinleitern. Um eine verbesserte Korrelation quantitativ ermittelter Genkopien des SARS-CoV-2 aus der jeweiligen Abwasserprobe mit dem Anteil der infizierten Bevölkerung zu erzeugen, ist eine Normalisierung der PCR Daten vorzunehmen. Neben relativ einfach zu ermittelnden physikalischen Größen, wie der mittleren Durchflussrate oder der Leitfähigkeit, die Aufschlüsse über den Anteil von Fremd- und Regenwasser ermöglichen, können auch anthropogene Marker, wie Spurenstoffe und Surrogatviren im Abwasser, als direkte Indikatoren für menschliche Fäkalien aus dem häuslichen Abwasser dienen. Im Folgenden soll eine vergleichende Untersuchung von vier Spurenstoffen ‒ Koffein (CAF), Carbamazepin (CBZ), Diclofenac (DCF), Isolithocholsäure (ILA) ‒ sowie einem Surrogatvirus (SV) (Pepper mild mottle virus (PMMoV) oder CrAssphage), die Eignung der jeweiligen Paramater als Normalisierungsfaktoren analysieren. Die Untersuchung fand an 19 Standorten über drei Monate im Rahmen einer Studie aus dem Projekt ESI-CorA statt. T2 - Wasser 2024 (Jahrestagung der Wasserchemischen Gesellschaft der GDCh) CY - Limburg an der Lahn, Germany DA - 06.05.2024 KW - ELISA KW - Immunoassay PY - 2024 AN - OPUS4-60992 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf T1 - Spurenstoffe im Rohabwasser: Möglichkeiten und Perspektiven für den One-Health-Ansatz N2 - Der One-Health-Ansatz hat die Gesundheit von Mensch, Tier und Umwelt im Fokus. Dazu ist eine interdisziplinäre Zusammenarbeit von Akteuren aus Human- und Veterinärmedizin sowie den Umweltwissenschaften notwendig. Ein Ineinandergreifen von methodischen Ansätzen und der Analytik wird angestrebt. Im Zuge der anstehenden Novellierung (2924) der EU-Kommunalabwasserrichtlinie (91/271/EWG) wird die Umsetzung eines One-Health-Ansatzes bereits adressiert. Dazu gehört zum einen der Ausbau und die Prozessüberwachung einer vierten Reinigungsstufe in Klärwerken. Zum anderen ist europaweit die Infrastruktur einer Abwassersurveillance zur Überwachung von Krankheitserregern zu gewährleisten. Dies wird aktuell in Deutschland mit dem Projekt AMELAG ("Abwassermonitoring zur epidemiologischen Lagebewertung") mit zwei Probennahmen pro Woche auf ca. 170 Kläranlagen umgesetzt. T2 - 6. Mülheimer Wasseranalytisches Seminar (MWAS 2024) CY - Mülheim an der Ruhr, Germany DA - 10.09.2024 KW - ELISA KW - Spurenstoffe KW - Koffein KW - Carbamazepin KW - Diclofenac KW - Immunoassay PY - 2024 AN - OPUS4-60993 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Ecke, Alexander A1 - Bell, Jérémy A1 - Schneider, Rudolf T1 - From Laboratory Immunoassays to Immunosensors with an Integrated Microfluidic Flow System N2 - This research summary describe efforts to the development of a three-dimensional microfluidic flow cell for improved electrochemical substrate detection in HRP/TMB-based immunoassays. This work provides a valuable advancement in the sensitivity and integration of immunoassay technologies, aiding in the refinement of diagnostic tools. KW - Antikörper KW - Immunoassay KW - Microfluidics KW - Electrochemical detection KW - Biosensor PY - 2025 UR - https://www.elveflow.com/microfluidics-research-summaries/from-laboratory-immunoassays-to-immunosensors-with-an-integrated-microfluidic-flow-system/ SP - 1 EP - 4 CY - Paris AN - OPUS4-62674 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Feord, Helen K. A1 - Trautwein-Schult, Anke A1 - Keuschnig, Christoph A1 - Ostrzinski, Anne A1 - Peter, Elisa K. A1 - Jaeger, Carsten A1 - Lisec, Jan A1 - Mourot, Rey A1 - Peters, Ravi Sven A1 - Çiftçi, Ozan A1 - Tranter, Martyn A1 - Anesio, Alexandre M. A1 - Becher, Dörte A1 - Benning, Liane G. T1 - Algae-dominated metaproteomes uncover cellular adaptations to life on the Greenland Ice Sheet N2 - Eukaryotic algae-dominated microbiomes thrive on the Greenland Ice Sheet (GrIS) in harsh environmental conditions, including low temperatures, high light, and low nutrient availability. Chlorophyte algae bloom on snow, while streptophyte algae dominate bare ice surfaces. Empirical data about the cellular mechanisms responsible for their survival in these extreme conditions are scarce. This knowledge gap was addressed by quantifying proteins for both algal taxa from samples on the southern margin of the GrIS. We show that the streptophyte glacier ice algae have a relative enrichment in proteins involved in environmental signaling and nutrient transport, indicative of cellular readiness to dynamically respond to extreme GriS environmental cues, linked, for example, to photoprotection and the rapid update of scarce nutrients. In contrast, the chlorophyte snow algae have a high abundance of proteins linked to lipid and nitrogen metabolisms, providing evidence for the biological processes sustaining the cellular carbon and nitrogen stores necessary for survival in an oligotrophic environment. We also identify proteins in both taxa linked to the synthesis and breakdown of key cellular pigments. Our study gives novel insights into the cellular biology of these algae and their adaptation to extreme environments. KW - Metabolic profiling KW - Mass spectrometry KW - Ice algae PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-641037 DO - https://doi.org/10.1038/s41522-025-00770-2 SN - 2055-5008 VL - 11 IS - 1 SP - 1 EP - 11 PB - Springer Science and Business Media LLC AN - OPUS4-64103 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Westwood, S. A1 - Martos, G. A1 - Josephs, R. A1 - Choteau, T. A1 - Wielgosz, R. A1 - Davies, S. A1 - Moawad, M. A1 - Tarrant, G. A1 - Chan, B. A1 - Alamgir, M. A1 - de Rego, E. A1 - Wollinger, W. A1 - Garrido, B. A1 - Fernandes, J. A1 - de Sena, R. A1 - Oliveira, R. A1 - Melanson, J. A1 - Bates, J. A1 - Mai Le, P. A1 - Meija, J. A1 - Quan, C. A1 - Huang, T. A1 - Zhang, W. A1 - Ma, R. A1 - Zhang, S. A1 - Hao, Y. A1 - He, Y. A1 - Song, S. A1 - Wang, H. A1 - Su, F. A1 - Zhang, T. A1 - Li, H. A1 - Lam, W. A1 - Wong, W. A1 - Fung, W. A1 - Philipp, Rosemarie A1 - Dorgerloh, Ute A1 - Meyer, Klas A1 - Piechotta, Christian A1 - Riedel, Juliane A1 - Westphalen, Tanja A1 - Giannikopoulou, P. A1 - Alexopoulos, Ch. A1 - Kakoulides, E. A1 - Kitamaki, Y. A1 - Yamazaki, T. A1 - Shimizu, Y. A1 - Kuroe, M. A1 - Numata, M. A1 - Pérez-Castorena, A. A1 - Balderas-Escamilla, M. A1 - Garcia-Escalante, J. A1 - Krylov, A. A1 - Mikheeva, A. A1 - Beliakov, M. A1 - Palagina, M. A1 - Tkachenko, I. A1 - Spirin, S. A1 - Smirnov, V. A1 - Tang Lin, T. A1 - Pui Sze, C. A1 - Juan, W. A1 - Lingkai, W. A1 - Ting, L. A1 - Quinde, L. A1 - Yizhao, C. A1 - Lay Peng, S. A1 - Fernandes-Whaley, M. A1 - Prevoo-Franzsen, D. A1 - Quinn, L. A1 - Nhlapo, N. A1 - Mkhize, D. A1 - Marajh, D. A1 - Chamane, S. A1 - Ahn, S. A1 - Choi, K. A1 - Lee, S. A1 - Han, J. A1 - Baek, S. A1 - Kim, B. A1 - Marbumrung, S. A1 - Jongmesuk, P. A1 - Shearman, K. A1 - Boonyakong, C. A1 - Bilsel, M. A1 - Gündüz, S. A1 - Ün, I. A1 - Yilmaz, H. A1 - Bilsel, G. A1 - Gökçen, T. A1 - Clarkson, C. A1 - Warren, J. A1 - Achtar, E. T1 - Mass fraction assignment of Bisphenol-A high purity material N2 - The CCQM-K148.a comparison was coordinated by the BIPM on behalf of the CCQM Organic Analysis Working Group for NMIs and DIs which provide measurement services in organic analysis under the CIPM MRA. It was undertaken as a "Track A" comparison within the OAWG strategic plan. CCQM-K148.a demonstrates capabilities for assigning the mass fraction content of a solid organic compound having moderate molecular complexity, where the compound has a molar mass in the range (75 - 500) g/mol and is non-polar (pKow < −2), when present as the primary organic component in a neat organic solid and where the mass fraction content of the primary component in the material is in excess of 950 mg/g. Participants were required to report the mass fraction of Bisphenol A present in one supplied unit of the comparison material. Participants using a mass balance method for the assignment were also required to report their assignments of the impurity components present in the material. Methods used by the seventeen participating NMIs or DIs were predominantly based on either stand-alone mass balance (summation of impurities) or qNMR approaches, or the combination of data obtained using both methods. The results obtained using thermal methods based on freezing-point depression methods were also reported by a limited number of participants. There was excellent agreement between assignments obtained using all three approaches to assign the BPA content. The assignment of the values for the mass fraction content of BPA consistent with the KCRV was achieved by most of the comparison participants with an associated relative standard uncertainty in the assigned value in the range (0.1 - 0.5)%. KW - Bisphenol-A KW - Purity assessment KW - Interlaboratory key comparison KW - Metrology PY - 2021 DO - https://doi.org/10.1088/0026-1394/58/1A/08015 VL - 58 IS - 1A SP - 08015 PB - IOP Publishing AN - OPUS4-54188 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Blumrich, A. A1 - Vogler, G. A1 - Dresen, S. A1 - Diop, S. B. A1 - Jaeger, Carsten A1 - Leberer, S. A1 - Grune, J. A1 - Wirth, E. K. A1 - Hoeft, B. A1 - Renko, K. A1 - Foryst-Ludwig, A. A1 - Spranger, J. A1 - Sigrist, S. A1 - Bodmer, R. A1 - Kintscher, U. T1 - Fat-body brummer lipase determines survival and cardiac function during starvation in Drosophila melanogaster N2 - The cross talk between adipose tissue and the heart has an increasing importance for cardiac function under physiological and pathological conditions. This study characterizes the role of fat body lipolysis for cardiac function in Drosophila melanogaster. Perturbation of the function of the key lipolytic enzyme, brummer (bmm), an ortholog of themammalian ATGL (adipose triglyceride lipase) exclusively in the fly’s fat body, protected the heart against starvation-induced dysfunction. We further provide evidence that this protection is caused by the preservation of glycerolipid stores, resulting in a starvation-resistant maintenance of energy supply and adequate cardiac ATP synthesis. Finally, we suggest that alterations of lipolysis are tightly coupled to lipogenic processes, participating in the preservation of Lipid energy substrates during starvation. Thus, we identified the inhibition of adipose tissue lipolysis and subsequent energy preservation as a protective mechanism against cardiac dysfunction during catabolic stress. KW - High-resolution mass spectrometry KW - Nontarget analysis PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-528756 DO - https://doi.org/10.1016/j.isci.2021.102288 VL - 24 IS - 4 SP - 102288 AN - OPUS4-52875 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Jaeger, Carsten A1 - Ritter, D. A1 - Goeritzer, M. A1 - Thiele, A. A1 - Blumrich, A. A1 - Beyhoff, N. A1 - Luettges, K. A1 - Smeir, E. A1 - Kasch, J. A1 - Grune, J. A1 - Müller, O. A1 - Klopfleisch, R. A1 - Foryst-Ludwig, A. A1 - Kintscher, U. T1 - Liver X Receptor Agonist AZ876 Induces Beneficial Endogenous Cardiac Lipid Reprogramming and Protects Against Isoproterenol-Induced Cardiac Damage N2 - Background - It is known that dietary intake of polyunsaturated fatty acids may improve cardiac function. However, relatively high daily doses are required to achieve sufficient cardiac concentrations of beneficial omega‐3 fatty acids. The liver X receptor (LXR) is a nuclear hormone receptor and a crucial regulator of lipid homeostasis in mammals. LXR activation has been shown to endogenously reprogram cellular lipid profiles toward increased polyunsaturated fatty acids levels. Here we studied whether LXR lipid reprogramming occurs in cardiac tissue and exerts cardioprotective actions. Methods and Results - Male 129SV mice were treated with the LXR agonist AZ876 (20 µmol/kg per day) for 11 days. From day 6, the mice were injected with the nonselective β‐agonist isoproterenol for 4 consecutive days to induce diastolic dysfunction and subendocardial fibrosis while maintaining systolic function. Treatment with isoproterenol led to a marked impairment of global longitudinal strain and the E/e' ratio of transmitral flow to mitral annular velocity, which were both significantly improved by the LXR agonist. Histological examination showed a significant reduction in isoproterenol‐induced subendocardial fibrosis by AZ876. Analysis of the cardiac lipid composition by liquid chromatography‐high resolution mass spectrometry revealed a significant increase in cardiac polyunsaturated fatty acids levels and a significant reduction in saturated fatty acids by AZ876. Conclusions - The present study provides evidence that the LXR agonist AZ876 prevents subendocardial damage, improves global longitudinal strain and E/e' in a mouse model of isoproterenol‐induced cardiac damage, accompanied by an upregulation of cardiac polyunsaturated fatty acids levels. Cardiac LXR activation and beneficial endogenous cardiac lipid reprogramming may provide a new therapeutic strategy in cardiac disease with diastolic dysfunction. KW - Heart failure KW - Lipids KW - Liver X receptor KW - Diastolic dysfunction KW - Nuclear receptor PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-529352 DO - https://doi.org/10.1161/JAHA.120.019473 VL - 10 IS - 14 SP - e019473 AN - OPUS4-52935 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Langenhan, Jennifer A1 - Jaeger, Carsten A1 - Baum, K. A1 - Simon, M. A1 - Lisec, Jan T1 - A Flexible Tool to Correct Superimposed Mass Isotopologue Distributions in GC‐APCI‐MS Flux Experiments N2 - The investigation of metabolic fluxes and metabolite distributions within cells by means of tracer molecules is a valuable tool to unravel the complexity of biological systems. Technological advances in mass spectrometry (MS) technology such as atmospheric pressure chemical ionization (APCI) coupled with high resolution (HR), not only allows for highly sensitive analyses but also broadens the usefulness of tracer‐based experiments, as interesting signals can be annotated de novo when not yet present in a compound library. However, several effects in the APCI ion source, i.e., fragmentation and rearrangement, lead to superimposed mass isotopologue distributions (MID) within the mass spectra, which need to be corrected during data evaluation as they will impair enrichment calculation otherwise. Here, we present and evaluate a novel software tool to automatically perform such corrections. We discuss the different effects, explain the implemented algorithm, and show its application on several experimental datasets. This adjustable tool is available as an R package from CRAN. KW - Mass Spectrometry KW - Isotopologue Distribution KW - Metabolic Flux KW - R package PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-547318 DO - https://doi.org/10.3390/metabo12050408 VL - 12 IS - 5 SP - 1 EP - 10 PB - MDPI AN - OPUS4-54731 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Jaeger, Carsten A1 - Lisec, Jan T1 - Towards Unbiased Evaluation of Ionization Performance in LC-HRMS Metabolomics Method Development N2 - As metabolomics increasingly finds its way from basic science into applied and regulatory environments, analytical demands on nontargeted mass spectrometric detection methods continue to rise. In addition to improved chemical comprehensiveness, current developments aim at enhanced robustness and repeatability to allow long-term, inter-study, and meta-analyses. Comprehensive metabolomics relies on electrospray ionization (ESI) as the most versatile ionization technique, and recent liquid chromatography-high resolution mass spectrometry (LC-HRMS) instrumentation continues to overcome technical limitations that have hindered the adoption of ESI for applications in the past. Still, developing and standardizing nontargeted ESI methods and instrumental setups remains costly in terms of time and required chemicals, as large panels of metabolite standards are needed to reflect biochemical diversity. In this paper, we investigated in how far a nontargeted pilot experiment, consisting only of a few measurements of a test sample dilution series and comprehensive statistical analysis, can replace conventional targeted evaluation procedures. To examine this potential, two instrumental ESI ion source setups were compared, reflecting a common scenario in practical method development. Two types of feature evaluations were performed, (a) summary statistics solely involving feature intensity values, and (b) analyses additionally including chemical interpretation. Results were compared in detail to a targeted evaluation of a large metabolite standard panel. We reflect on the advantages and shortcomings of both strategies in the context of current harmonization initiatives in the metabolomics field. KW - Mass Spectrometry KW - Non-targeted analysis KW - Method development PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-548065 DO - https://doi.org/10.3390/metabo12050426 VL - 12 IS - 5 SP - 1 EP - 13 PB - MDPI AN - OPUS4-54806 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Munir, R. A1 - Lisec, Jan A1 - Jaeger, Carsten A1 - Zaidi, N. T1 - Abundance, fatty acid composition and saturation index of neutral lipids in colorectal cancer cell lines N2 - Lipid droplets, the dynamic organelles that store Triglycerides (TG) and cholesterol esters (CE), are highly accumulated in colon cancer cells. This work studies the TG and CE subspecies profile in colon carcinoma cell lines, SW480 derived from primary tumor, and SW620 derived from a metastasis of the same tumor. It was previously reported that the total TG and CE content is dramatically higher in SW620 cells; however, TG and CE subspecies profile has not been investigated in detail. The work presented here confirms that the total TG and CE Content is significantly higher in the SW620 cells. Moreover, the fatty acid (FA) composition of TG is significantly altered in the SW620 cells, with significant decrease in the abundance of saturated triglycerides. This resulted in a significantly decreased TG saturation index in the SW620 cells. The saturation index of CE was also significantly decreased in the SW620 cells. KW - Mass Spectroscopy KW - Metabolomics KW - Cancer PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-533504 DO - https://doi.org/10.18388/abp.2020_5465 VL - 68 IS - 1 SP - 1 EP - 4 PB - ABP Acta Biochimica Polonica AN - OPUS4-53350 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Vogel, Christian A1 - Roesch, Philipp A1 - Wittwer, Philipp A1 - Piechotta, Christian A1 - Lisec, Jan A1 - Sommerfeld, Thomas A1 - Kluge, Stephanie A1 - Herzel, Hannes A1 - Huthwelker, T. A1 - Borca, C. A1 - Simon, Franz-Georg T1 - Levels of per- and polyfluoroalkyl substances (PFAS) in various wastewater-derived fertilizers - Analytical investigations from different perspectives N2 - Solid wastewater-based fertilizers were screened for per- and polyfluoroalkyl substances (PFAS) by the extractable organic fluorine (EOF) sum parameter method. The EOF values for ten sewage sludges from Germany and Switzerland range from 154 to 7209 mg kg−1. For thermal treated sewage sludge and struvite the EOF were lower with values up to 121 mg kg−1. Moreover, the application of PFAS targeted and suspect screening analysis of selected sewage sludge samples showed that only a small part of the EOF sum parameter values can be explained by the usually screened legacy PFAS. The hitherto unknown part of EOF sum parameter contains also fluorinated pesticides, pharmaceutical and aromatic compounds. Because these partly fluorinated compounds can degrade to (ultra-)short PFAS in wastewater treatment plants they should be considered as significant sources of organic fluorine in the environment. The combined results of sum parameter analysis and suspect screening reveal the need to update current regulations, such as the German fertilizer ordinance, to focus not solely on a few selected PFAS such as perfluorooctane sulfonic acid (PFOS) and perfluorooctanoic acid (PFOA) but consider an additional sum parameter approach as a more holistic alternative. Moreover, diffusion gradient in thin-films (DGT) passive samplers were utilized as an alternative simplified extraction method for PFAS in solid wastewater-based fertilizers and subsequently quantified via combustion ion chromatography. However, the DGT method was less sensitive and only comparable to the EOF values of the fertilizers in samples with >150 mg kg−1, because of different diffusion properties for various PFAS, but also kinetic exchange limitations. KW - Combustion ion chromatography KW - Per- and polyfluoroalkyl substances (PFAS) KW - Sewage sludge KW - Fertilizer PY - 2023 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-583429 DO - https://doi.org/10.1039/d3va00178d SN - 2754-7000 VL - 2 IS - 10 SP - 1436 EP - 1445 PB - Royal Society of Chemistry (RSC) CY - London AN - OPUS4-58342 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Russo, Francesco F. A1 - Nowatzky, Yannek A1 - Jaeger, Carsten A1 - Parr, Maria K. A1 - Benner, Philipp A1 - Muth, Thilo A1 - Lisec, Jan T1 - Machine learning methods for compound annotation in non‐targeted mass spectrometry—A brief overview of fingerprinting, in silico fragmentation and de novo methods N2 - Non‐targeted screenings (NTS) are essential tools in different fields, such as forensics, health and environmental sciences. NTSs often employ mass spectrometry (MS) methods due to their high throughput and sensitivity in comparison to, for example, nuclear magnetic resonance–based methods. As the identification of mass spectral signals, called annotation, is labour intensive, it has been used for developing supporting tools based on machine learning (ML). However, both the diversity of mass spectral signals and the sheer quantity of different ML tools developed for compound annotation present a challenge for researchers in maintaining a comprehensive overview of the field.In this work, we illustrate which ML‐based methods are available for compound annotation in non‐targeted MS experiments and provide a nuanced comparison of the ML models used in MS data analysis, unravelling their unique features and performance metrics. Through this overview we support researchers to judiciously apply these tools in their daily research. This review also offers a detailed exploration of methods and datasets to show gaps in current methods, and promising target areas, offering a starting point for developers intending to improve existing methodologies. KW - Mass Spectrometry KW - Spectra annotation KW - Machine learning PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-608732 DO - https://doi.org/10.1002/rcm.9876 VL - 38 IS - 20 SP - 1 EP - 15 PB - Wiley AN - OPUS4-60873 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Peter, Elisa K. A1 - Jaeger, Carsten A1 - Lisec, Jan A1 - Peters, R. Sven A1 - Mourot, Rey A1 - Rossel, Pamela E. A1 - Tranter, Martyn A1 - Anesio, Alexandre M. A1 - Benning, Liane G. T1 - Endometabolic profiling of pigmented glacier ice algae: the impact of sample processing N2 - Introduction Glacier ice algae, mainly Ancylonema alaskanum and Ancylonema nordenskiöldi, bloom on Greenland Ice Sheet bare ice surfaces. They significantly decrease surface albedo due to their purple-brown pigmentation, thus increasing melt. Little is known about their metabolic adaptation and factors controlling algal growth dynamics and pigment formation. A challenge in obtaining such data is the necessity of melting samples, which delays preservation and introduces bias to metabolomic analysis. There is a need to evaluate the physiological response of algae to melting and establish consistent sample processing strategies for metabolomics of ice microbial communities. Objectives To address the impact of sample melting procedure on metabolic characterization and establish a processing and analytical workflow for endometabolic profiling of glacier ice algae. Methods We employed untargeted, high-resolution mass spectrometry and tested the effect of sample melt temperature (10, 15, 20 °C) and processing delay (up to 49 h) on the metabolome and lipidome, and complemented this approach with cell counts (FlowCam), photophysiological analysis (PAM) and diversity characterization. Results and Conclusion We putatively identified 804 metabolites, with glycerolipids, glycerophospholipids and fatty acyls being the most prominent superclasses ( 50% of identified metabolites). Among the polar metabolome, carbohydrates and amino acid-derivatives were the most abundant. We show that 8% of the metabolome is affected by melt duration, with a pronounced decrease in betaine membrane lipids and pigment precursors, and an increase in phospholipids. Controlled fast melting at 10 °C resulted in the highest consistency, and is our recommendation for future supraglacial metabolomics studies. KW - Metabolic profiling KW - Mass Spectrometry KW - Ice algae PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-607921 DO - https://doi.org/10.1007/s11306-024-02147-6 VL - 20 IS - 5 SP - 1 EP - 15 PB - Springer Science and Business Media LLC AN - OPUS4-60792 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf A1 - Konthur, Zoltán A1 - Jaeger, Carsten T1 - Reference Material (IgG) for CCQM-PAWG Key Comparison N2 - BAM proposes a recombinant human IgG (anti-tetanus monoclonal antibody SA13) as candidate material for the 2027 CCQM-PAWG key comparison on antibody purity. The antibody is produced via hybridoma and recombinant expression systems, with detailed sequence and glycosylation profiling. Analytical methods include MALDI-TOF-MS, SEC, DLS, and UV-vis spectroscopy to assess purity, aggregation, and stability. Preliminary results show high purity, low heterogeneity, and consistent size distribution. A minimum of 40 mg IgG is required, with 100 mg preferred for deeper characterization. Production is expected to be completed by the end of 2026, with potential for a joint technical project. T2 - Spring Meeting of CCQM-PAWG CY - Sèvres, France DA - 06.04.2025 KW - Antibodies KW - Research Grade Test Material KW - Mass spectrometry KW - Affinity PY - 2025 AN - OPUS4-63503 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Susset, Bernd A1 - Kalbe, Ute T1 - Spezifische Herausforderungen bei der PFAS-Elution N2 - Im Teil des Workshops, der sich mit Praxiserfahrungen zu den Elutionsverfahren DIN 19528 und DIN 19529 befasste, wurden spezifische Herausforderungen bei Elutionsuntersuchungen von Bodenproben mit einer PFAS-Kontamination vorgestellt. Aus durchgeführten Robustheitsuntersuchungen im ZAG der Universität Tübingen sowie in der BAM wurden praxisrelevante Schlussfolgerungen erläutert und für einzelne PFAS-Verbindungen und Vorläufersubstanzen konkretisiert. Dabei wurde auch auf die Vergleichbarkeit von Schüttel- und Säulenversuchen beim bewertungsrelevanten Wasser/Feststoff-Verhältnis von 2 l/kg und die Bedeutung des Fest/Flüssigtrennschrittes beim Schüttelverfahren eingegangen. Die Untersuchung von Böden auf PFAS mit Elutionsversuchen ist generell möglich, aber es besteht eine komplexe Abhängigkeit der Konzentrationen im Eluat vom Gesamtgehalt, der Löslichkeit und des Verteilungsmusters der einzelnen PFAS, der Art der Bodenmatrix und dem Einfluss der Probenaufbereitung vor der Analytik. Die geringere Sensitivität der Feststoffanalytik für PFAS im Vergleich zur Eluatanalytik erschwert die Berechnung von Massenbilanzen. T2 - Workshop / Anwendertreffen Elutionsverfahren im Regelungsbereich der Mantelverordnung (ErsatzbaustoffV / BBodSchV) und der EU-BauPVO CY - Berlin, Germany DA - 07.05.2024 KW - Elution KW - PFAS KW - Prekursoren KW - Boden KW - Säulenversuch KW - Schüttelversuch PY - 2024 AN - OPUS4-62065 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf T1 - Monitoring trace substances in wastewater and surface water by immunoanalytical assays and sensors N2 - Monitoring the elimination of trace substances in wastewater treatment plants, as required in the recast of the EU Urban Wastewater Treatment Directive and the new Kommunalabwasserrichtlinie (KARL), creates a need for on-site analyses in wastewater treatment plants. Immunoanalytical methods can be carried out on site, e.g. in the form of rapid tests, but continuously operating (immuno-bio)sensors would be ideal. And antibody-based methods have the inherent disadvantage that one antibody must be used per analyte and therefore only a small number of substances can be analysed. A set of indicators has been integrated in the directives in accordance with the list of the Kompetenzzentrum Spurenstoffe BW (KomS) and offer points of reference here. Yet, in order to be able to use immunoanalytical methods for their monitoring, (DIN/ISO) standards are required that define the necessary quality requirements and quality management measures for the sensors. In addition, for the larger part of the indicators, the required antibodies have yet to be developed and made commercially available in the long term. The talk will highlight our previous work on high-throughput methods, such as ELISA, regarding the presence of anthropogenic markers and some indicators as well as research approaches for sensor technology that could be used on-site, and will provide an overview of deficits and future efforts. T2 - Kolloquium der Abteilung Technische Umweltchemie und Sensortechnik CY - Stuttgart, Germany DA - 21.05.2025 KW - Antibodies KW - Immunoassay KW - Microfluidics KW - Biosensor KW - Trace substances PY - 2025 AN - OPUS4-63501 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Schneider, Rudolf T1 - Wasserdiagnose durch die Verwendung von Markern N2 - Die Überwachung des gesamten Wasserkreislaufs auf Mikroverunreinigungen ist aus gesundheitlicher und ökologischer Hinsicht wünschenswert und gewinnt durch den Klimawandel und das zunehmende Erfordernis der Wiederverwendung des Brauchwassers weiter an Bedeutung. Die schnellen und kostengünstigen antikörperbasierten Methoden („Immunoassays“) können helfen, Informationslücken zu schließen und kürzere Reaktionszeiten zu ermöglichen. Von Labormethoden über tragbare Analysengeräte bis hin zu Online-Sensoren sind viele Formate möglich (u. a. ELISA, Abb. 1). Es muss zudem die Bereitstellung der notwendigen, hochqualitativen Antikörper gewährleistet werden. Da aber gilt „1 Analyt – 1 Antikörper“, ist die Herstellung eines Konsenses bezüglich der vordringlich zu bestimmenden Indikatoren/Marker notwendig. Auch die Normung der Verfahren ist parallel in Angriff zu nehmen. KW - Antikörper KW - Immunoassay KW - Abwasser KW - ELISA PY - 2025 UR - https://analyticalscience.wiley.com/content/article-do/wasserdiagnose-durch-die-verwendung-von-markern VL - 2025 IS - 1 SP - 1 EP - 4 PB - WILEY CY - Hoboken, NJ, USA AN - OPUS4-63508 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf T1 - Keeping the Y N2 - The talk traces my career path and presents BAM as an attractive employer. It also offers advice on shaping one's own career after PhD. T2 - IWC Alumni Day 2025 CY - Garching bei München, Germany DA - 04.07.2025 KW - Antibodies KW - ELISA KW - Career PY - 2025 AN - OPUS4-63640 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Lisec, Jan T1 - CorMID - Correct Mass Isotopologue Distribution Vectors N2 - The investigation of metabolic fluxes and metabolite distributions within cells by means of tracer molecules is a valuable tool to unravel the complexity of biological systems. Technological advances in mass spectrometry (MS) technology such as atmospheric pressure chemical ionization (APCI) coupled with high resolution (HR), not only allows for highly sensitive analyses but also broadens the usefulness of tracer-based experiments, as interesting signals can be annotated de novo when not yet present in a compound library. However, several effects in the APCI ion source, i.e., fragmentation and rearrangement, lead to superimposed mass isotopologue distributions (MID) within the mass spectra, which need to be corrected during data evaluation as they will impair enrichment calculation otherwise. Here, we present and evaluate a novel software tool to automatically perform such corrections. We discuss the different effects, explain the implemented algorithm, and show its application on several experimental datasets. This adjustable tool is available as an R package from CRAN. KW - Mass Spectrometry KW - Software KW - R package KW - Mass Isotopomer Distribution KW - Flux Analysis PY - 2022 UR - https://github.com/cran/CorMID/ PB - GitHub CY - San Francisco, CA, USA AN - OPUS4-56442 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Lisec, Jan A1 - Kobelt, D. A1 - Walther, W. A1 - Mokrizkij, M. A1 - Grötzinger, C. A1 - Jaeger, Carsten A1 - Baum, K. A1 - Simon, M. A1 - Wolf, J. A1 - Beindorf, N. A1 - Brenner, W. A1 - Stein, U. T1 - Systematic Identification of MACC1-Driven Metabolic Networks in Colorectal Cancer N2 - MACC1 is a prognostic and predictive metastasis biomarker for more than 20 solid Cancer entities. However, its role in cancer metabolism is not sufficiently explored. Here, we report on how MACC1 impacts the use of glucose, glutamine, lactate, pyruvate and fatty acids and show the comprehensive analysis of MACC1-driven metabolic networks. We analyzed concentrationdependent changes in nutrient use, nutrient depletion, metabolic tracing employing 13C-labeled substrates, and in vivo studies. We found that MACC1 permits numerous effects on cancer metabolism. Most of those effects increased nutrient uptake. Furthermore, MACC1 alters metabolic pathways by affecting metabolite production or turnover from metabolic substrates. MACC1 supports use of glucose, glutamine and pyruvate via their increased depletion or altered distribution within metabolic pathways. In summary, we demonstrate that MACC1 is an important regulator of metabolism in cancer cells. KW - Mass Spectroscopy KW - Metabolomics KW - Cancer PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-533526 DO - https://doi.org/10.3390/cancers13050978 VL - 13 IS - 5 SP - 1 EP - 22 PB - MDPI Journal Cancers AN - OPUS4-53352 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Russo, Francesco Friedrich T1 - Low energy-electron ionisation mass spectrometry in non-targeted analysis N2 - The high throughput and sensitivity of mass spectrometry has resulted in a broad application in non-targeted screenings (NTS). Gas chromatography electron ionisation mass spectrometry (GC-EI-MS) methods show high reproducibility of fragmentation patterns, good separation, and vast spectral libraries. A significant disadvantage of standard 70 eV EI is the high degree of fragmentation with a possible loss of the molecular ion signal. The loss of molecular ion signal results in an increased difficulty in identifying compounds absent from spectral libraries as it precludes a straightforward molecular formula assignment. The high degree of fragmentation, and the resulting depletion of high m/z signals, also results in a reduced discriminatory power. The disadvantages of EI-MS are approached by soft ionisation techniques and, more recently, low energy (LE) EI-MS. LE-EI is a softer version of EI, which keeps high similarity with the standard 70 eV EI spectra and the good chromatographic properties of GC, while reducing the depletion of higher m/z ion signals. LE-EI-MS has been applied doping analytics[1], metabolomics[2], and fingerprinting of foods[3]. Our objective is the comparison of LE-EI-MS to alternative soft ionisation methods, e.g. APCI-MS, and the development of a NTS workflow for LE-EI-MS, including a highly automated data processing and annotation pipeline. In a first phase 13 compound libraries (705 compounds) will be measured at 14, 18, and 70 eV. Molecular ion abundance and similarity to standard 70 eV spectra are going to be evaluated. Furthermore, common neutral losses and fragments will be identified and included into an annotation tool. If the tool shows satisfying performance, it will be published (either as a standalone package or as an expansion to the InterpretMSSpectrum[4, 5] R package). T2 - ANAKON 2025 CY - Leipzig, Germany DA - 10.03.2025 KW - Mass Spectrometry (MS) KW - Low Energy Electron Ionisation Mass Spectrometry (LE-EI-MS) KW - Non-tagreted analysis PY - 2025 AN - OPUS4-62781 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Piechotta, Christian T1 - Development, Validation and Application of an Accelerated Weathering Protocol for Assessing Bisphenol A Release from Polycarbonate Materials into the environment N2 - Bisphenol A (BPA) is under continuous regulatory scrutiny and listed as substance of very high concern (SVHC). Particular concern is related to its frequent detection in surface waters, despite being readily biodegradable. Several studies have been conducted to investigate sources and pathways of BPA in the environment, concluding that its main use as monomer in polycarbonate (PC) contributes only marginally to environmental BPA releases over its life cycle. To better understand the actual releases of BPA from PC under environmental conditions, a newly developed methodology (Federal Institute for Materials Research and Testing, BAM) was applied, which comprises a novel accelerated weathering protocol for polycarbonate (PC) materials, combined with an advanced analytical setup allowing for improved detection of BPA at trace level concentrations. The weathering protocol achieves a 13.6-fold acceleration compared to Central European outdoor conditions and simulates environmental stressors (global radiation, rain, temperature variations) in a laboratory weathering chamber, with simultaneous BPA release measurements using an organic isotope dilution calibration LC-MS/MS approach. Validation was performed in parallel outdoor exposure tests, by using haze and yellowness index measurements as reference parameters. PC sample types representative of major polycarbonate applications were examined: Samples with different levels of UV-protection as used in transparent sheets used outdoor in construction or housings in Electro- and Electronic applications as well as samples with a protective coating as used in automotive applications (headlamps, glazing and construction). Results demonstrated consistently low total BPA releases of around 0.3 mg m⁻² for samples with exposed PC surfaces, while releases from coated samples were significantly reduced by around two orders of magnitude. In all cases examined, the BPA release ceased to zero after a period of four to six weeks, equivalent to approximately 1 to 1.5 years of outdoor exposure. This suggests that potential BPA releases diminish to virtually zero after that timespan. While the newly developed test method is not suitable for routine laboratory implementation, it provides crucial quantitative data on BPA release from PC materials during accelerated environmental weathering. T2 - Umwelt 2025 CY - Dessau, Germany DA - 22.09.2025 KW - Bisphenol A KW - Polycarbonate KW - Weathering PY - 2025 AN - OPUS4-64664 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Piechotta, Christian T1 - The European Metrology Network for Pollution Monitoring – EMN POLMO N2 - The EU’s Green Deal acknowledges that « the EU needs to better monitoring, report, prevent and remedy pollution from air, water, soil and consumer products and to look more systematically at all policies and regulations ». In order to address these challenges, the Commission launched a new Strategy for Sustainability in October 2020, and adopted a Zero-pollution Action Plan for air, water and soil, in 2021. The comparability and trueness of measurements are often compromised by the lack of intact traceability chains and appropriate quality controls, for example attained by the use of matrix-matched certified reference materials, participation in interlaboratory comparisons and other validation schemes . Noticeable improvements are apprehended after practical demonstrations and scientific discussions on the importance of traceability to the SI with stakeholders and end-users . The European Metrology Network for Pollution Monitoring (EMN POLMO) was created in 2022 to provide metrology support to the environmental community and industry involved in the monitoring of variety of pollutants, including chemical pollutants, radionuclides, biological & microbiological, and nano and micro particles, in the three environmental compartments (air, water and soil). Recently, light pollution and noise pollution have been included in the scope of the network. One of the main goals of POLMO is to bridge the interests of the different stakeholder and end-user, and to contribute to environmental sustainability through the provision of tools and resources, required to perform accurate, comparable measurements. The POLMO Strategic Research Agenda identifies the key measurement challenges and opportunities in pollution monitoring and sets out a roadmap for future research and development. T2 - BIPM - 150 years of meter convention CY - Versailles, France DA - 20.05.2025 KW - POLMO KW - EMN PY - 2025 AN - OPUS4-64662 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Piechotta, Christian T1 - Development, Validation and Application of an Accelerated Weathering Protocol for Assessing Bisphenol A Release from Polycarbonate Materials into the environment N2 - Bisphenol A (BPA) is under continuous regulatory scrutiny and listed as substance of very high concern (SVHC). Particular concern is related to its frequent detection in surface waters, despite being readily biodegradable. Several studies have been conducted to investigate sources and pathways of BPA in the environment, concluding that its main use as monomer in polycarbonate (PC) contributes only marginally to environmental BPA releases over its life cycle. To better understand the actual releases of BPA from PC under environmental conditions, a newly developed methodology (Federal Institute for Materials Research and Testing, BAM) was applied, which comprises a novel accelerated weathering protocol for polycarbonate (PC) materials, combined with an advanced analytical setup allowing for improved detection of BPA at trace level concentrations. The weathering protocol achieves a 13.6-fold acceleration compared to Central European outdoor conditions and simulates environmental stressors (global radiation, rain, temperature variations) in a laboratory weathering chamber, with simultaneous BPA release measurements using an organic isotope dilution calibration LC-MS/MS approach. Validation was performed in parallel outdoor exposure tests, by using haze and yellowness index measurements as reference parameters. PC sample types representative of major polycarbonate applications were examined: Samples with different levels of UV-protection as used in transparent sheets used outdoor in construction or housings in Electro- and Electronic applications as well as samples with a protective coating as used in automotive applications (headlamps, glazing and construction). Results demonstrated consistently low total BPA releases of around 0.3 mg m⁻² for samples with exposed PC surfaces, while releases from coated samples were significantly reduced by around two orders of magnitude. In all cases examined, the BPA release ceased to zero after a period of four to six weeks, equivalent to approximately 1 to 1.5 years of outdoor exposure. This suggests that potential BPA releases diminish to virtually zero after that timespan. While the newly developed test method is not suitable for routine laboratory implementation, it provides crucial quantitative data on BPA release from PC materials during accelerated environmental weathering. T2 - Umwelt 2025 CY - Dessau, Germany DA - 22.09.2025 KW - Bisphenol A KW - Polycarbonate KW - Weathering PY - 2025 AN - OPUS4-64665 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Piechotta, Christian T1 - Comparison of three different TOP Assay approaches for the determination of PFAS concentration in soil N2 - Within a project by the German Environmental Agency (Umweltbundesamt – UBA) soil samples are taken at different sites all over Germany. The concentration of 30 PFAS - 13 carboxylic acids (C4-C18), 5 sulfonic acids (C4-C10) and 12 precursor substances) - was determined in these soil samples using three different sample preparation approaches: 1) ultrasonic extraction of the soil samples with Methanol; 2) preparation of eluates to test the leaching behaviour of the PFAS and 3) TOP assays following the method published by Houtz & Sedlak. Targeted LC-MS/MS is used to determine PFAS concentration after all three preparation steps. For the TOP assay, the concentration of all 30 PFAS is compared prior to and after the oxidation reaction. Besides the ‘classic’ TOP assay, two other TOP assay approaches, the dTOP assay and the photoTOP assay, are tested and compared. First, all three TOP assay approaches will be tested on a reference soil spiked with a solution including all 30 PFAS measured in the project. Later, soil samples taken within the the priorly described project will were tested. This work is financed by the UBA via the ReFoPlan2021 project, FKZ372171. T2 - Euroanalysis 2025 CY - Barcelona, Spain DA - 31.08.2025 KW - PFAS KW - TOP-Assay KW - Soil PY - 2025 AN - OPUS4-64666 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -