TY - CONF A1 - Schneider, Rudolf T1 - Bestimmung von anthropogenen Markerkonzentrationen für die SARS-CoV-2 Quantifizierung mittels eines Hochdurchsatzverfahrens (ELISA) N2 - ESI-CorA ist ein nationales Verbundprojekt mit dem Ziel des Nachweises von SARS-CoV-2 im Abwasser. Das UBA hat als Teilprojekt das Projekt MARKERIA (VH1802) an die BAM vergeben. Ziel des Projektes ist es, die Eignung der Bestimmung eines oder mehrerer der genannten anthropogenen Marker im Abwasser zur Volumenkorrektur („Kalibration“) im SARS-CoV-2-Monitoring von Abwässern auf der Basis eines von der BAM zu erhebenden Messdatensatzes zu evaluieren. T2 - 12. Sitzung des Begleitkreises des nationalen Verbundprojektes ESI-CorA CY - Online meeting DA - 13.06.2022 KW - Biosensoren KW - Immunoassay KW - SARS-CoV-2 PY - 2022 AN - OPUS4-57110 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf T1 - Bestimmung von anthropogenen Markerkonzentrationen für die SARS-CoV-2 Quantifizierung mittels eines Hochdurchsatzverfahrens (ELISA) N2 - 1. Projektreffen mit dem Umweltbundesamt für das Projekt MARKERIA (VH1802). Ziel des Projektes ist es, die Eignung der Bestimmung eines oder mehrerer der genannten anthropogenen Marker im Abwasser zur Volumenkorrektur („Kalibration“) im SARS-CoV-2-Monitoring von Abwässern auf der Basis eines von der BAM zu erhebenden Messdatensatzes zu evaluieren. T2 - 1. Projekttreffen mit dem UBA zum Projekt MARERIA (VH1802) CY - Berlin, Germany DA - 15.09.2022 KW - Biosensoren KW - Immunoassay KW - SARS-CoV-2 PY - 2022 AN - OPUS4-57111 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Schneider, Rudolf T1 - Bestimmung von anthropogenen Markerkonzentrationen für die SARS-CoV-2 Quantifizierung mittels eines Hochdurchsatzverfahrens (ELISA) N2 - 2. Projekttreffen mit dem Umweltbundesamt zum Projekt MARKERIA (VH1802). Ziel des Projektes ist es, die Eignung der Bestimmung eines oder mehrerer der genannten anthropogenen Marker im Abwasser zur Volumenkorrektur („Kalibration“) im SARS-CoV-2-Monitoring von Abwässern auf der Basis eines von der BAM zu erhebenden Messdatensatzes zu evaluieren. T2 - 2. Projekttreffen mit dem UBA zum Projekt MARKERIA (VH1802) CY - Berlin, Germany DA - 25.11.2022 KW - Biosensoren KW - Immunoassay KW - SARS-CoV-2 PY - 2022 AN - OPUS4-57112 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Wulfes, Birte S. T1 - Rekombinante Herstellung und explorative Anwendung immobilisierter, thermostabiler Trypsin-Varianten für die Bottom-Up-Proteomik N2 - Die Erforschung des Proteoms, der Gesamtheit der Proteine eines Lebewesens, ist von großer Bedeutung für das Verständnis biologischer Systeme. Aufgrund dessen ist die Proteomik ist eines der bedeutendsten aktuellen Forschungsfelder der Biowissenschaften. In der Bottom-Up-Proteomik werden die Proteine einer Probe vor ihrer Analyse einem enzymatischen Verdau mit Proteasen unterzogen, was eine erleichterte Analyse mit hohem Durchsatz ermöglicht. Aufgrund seiner hohen Aktivität und Effektivität hat sich die Serinprotease Trypsin als Standard-Enzym der Proteomik etabliert. Die weitere Verbesserung ihrer Enzymcharakteristika, wie Thermostabilität und Aktivität, ist unter anderem durch Immobilisierung an ein Trägermaterial oder genetische Modifikation möglich. In der vorliegenden Arbeit wurde eine von Xiao et al. 2023 entwickelte thermostabile Trypsin-Variante mit erhöhter Oberflächen-Hydrophobizität rekombinant in E. coli hergestellt und sowohl immobilisiert als auch in Lösung hinsichtlich ihrer Enzymaktivität und Thermostabilität im Vergleich zum Wildtyp charakterisiert. Die vorliegende Arbeit stellt dabei eine Erstbeschreibung der Immobilisierung einer thermostabilen Trypsin-Spezies an ein Trägermaterial dar und untersucht somit erstmalig das Zusammenspiel der beiden Optimierungsstrategien Immobilisierung und genetische Modifikation. Das thermostabile Trypsin und sein Wildtyp wurden rekombinant als Zymogene hergestellt, wobei trotz verschiedener Strategien zum Erhalt der nativen Konformation, wie der Fusion mit dem Chaperon-ähnlichen Maltose-bindenden Protein (MBP), eine starke Aggregation in Einschlusskörperchen (inclusion bodies, IB) erfolgte. Im Zuge der Rückfaltung der fehlgefalteten Proteine wurden verschiedene Rückfaltungsbedingungen untersucht, wobei die Vorteile einer langsamen Absenkung des Gehalts der Denaturierungsreagenz in Kombination mit einem Cystein-Cystine- Redoxsystem dargelegt werden konnten. Es konnte keine Verbesserung der Aktivität und Thermostabilität des genetisch modifizierten Enzyms in freier Form festgestellt werden, jedoch eine erhöhte Substrataffinität. Durch Immobilisierung an Magnetbeads mit tosylfunktionalisierter Oberfläche konnte die Enzymaktivität der genetisch modifizierten Trypsin-Variante bei 80 °C vollständig erhalten werden, während die Aktivität des Wildtyps verringert wurde. Dies legt nahe, dass die erhöhte Oberflächen-Hydrophobizität der modifizierten Trypsin-Variante zu einer erhöhten Bindung an das Trägermaterial beiträgt, was eine Verbesserung der Stabilität bei thermischer Erhitzung bewirkt. KW - Rekombinante Proteine KW - Proteomik KW - Thermostabile Enzyme KW - Immobilisierung PY - 2024 SP - 1 EP - 149 PB - Technische Universität Berlin CY - Berlin AN - OPUS4-60885 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Peña-Diaz, Priscila A1 - Braymer, Joseph A1 - Vacek, Vojtěch A1 - Zelená, Marie A1 - Lometto, Stefano A1 - Mais, Christopher-Nils A1 - Hrdý, Ivan A1 - Treitli, Sebastian C. A1 - Hochberg, Georg K.A. A1 - Py, Béatrice A1 - Lill, Roland A1 - Hampl, Vladimír T1 - Characterization of the SUF FeS cluster synthesis machinery in the amitochondriate eukaryote Monocercomonoides exilis N2 - Monocercomonoides exilis is the first known amitochondriate eukaryote. Loss of mitochondria in M. exilis ocurred after the replacement of the essential mitochondrial iron-sulfur cluster (ISC) assembly machinery by a unique, bacteria-derived, cytosolic SUF system. It has been hypothesized that the MeSuf pathway, in cooperation with proteins of the cytosolic iron-sulfur protein assembly (CIA) system, is responsible for the biogenesis of FeS clusters in M. exilis, yet biochemical evidence is pending. Here, we address the M. exilis MeSuf system and show that SUF genes, individually or in tandem, support the loading of iron-sulfur (FeS) clusters into the reporter protein IscR in Escherichia coli. The Suf proteins MeSufB, MeSufC, and MeSufDSU interact in vivo with one another and with Suf proteins of E. coli. In vitro, the M. exilis Suf proteins form large complexes of varying composition and hence may function as a dynamic biosynthetic system in the protist. The putative FeS cluster scaffold MeSufB-MeSufC (MeSufBC) forms multiple oligomeric complexes, some of which bind FeS clusters and form selectively only in the presence of adenosine nucleotides. The multi-domain fusion protein MeSufDSU binds a PLP cofactor and can form higher-order complexes with MeSufB and MeSufC. Our work demonstrates the biochemical property of M. exilis Suf proteins to act as a functional FeS cluster assembly system and provides insights into the molecular mechanism of this unique eukaryotic SUF system. KW - Biocorrosion KW - Hydrogenases KW - Iron-sulfur clusters KW - Metalloproteins PY - 2024 DO - https://doi.org/10.1016/j.cub.2024.07.018 SP - 1 EP - 37 PB - Elsevier Inc. AN - OPUS4-60755 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - August, Dennis T1 - Understanding interfacial chemistry: probing surface modifications by differential phage display N2 - Phage surface display combined with next-generation sequencing allows for the in-depth analysis of millions of sequences and enables the discovery of specific target binding peptides. The vast amount of valuable data from next-generation phage display experiments on material surfaces can be used to gain insight into peptide-based molecular interactions to reveal the local interfacial chemistry. The talk will discuss a developed differential strategy for data-driven probing of 3D printed electrodes before and after electrochemical activation. T2 - SALSA Make and Measure 2024 CY - Berlin, Germany DA - 11.09.2024 KW - Phage display KW - Data science KW - Machine learning KW - Composite electrodes PY - 2024 AN - OPUS4-61050 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Ali, Syrine T1 - Antibiotics in wastewater: Optimisation of an ELISA Assay for the Detection of Clarithromycin in Wastewater N2 - Since they were first discovered, antibiotics have been used extensively to treat diseases caused by bacteria. This increasing and uncontrollable use is causing a number of environmental problems. Unfortunately, traces of various antibiotics can be found in drinking water also in wastewater. In this study was focused on the detection of clarithromycin (CLA) in wastewater using the immunofluorescence ELISA assay which is a highly selective and sensitive technique. ELISA is a multi-type of technique and the one used in this study was the indirect competitive ELISA. For the detection of CLA, a checkerboard was performed to obtain a dilution factor until 1:1,000,000 for the antigen (CLA-BSA) with a concentration of 5 ng/mL and a dilution factor until 1:5,120,00 for the primary antibody (anti-CLA mAb) with a concentration of 1. 035 ng/mL. Standardization was performed to obtain a better profile of the 4-parameter curve A, B, C and D which determines the maximum, minimum and inflection concentration. In addition, a pure synthetic water experiment was used to determine the stability of the assay and the matrix effect due to some interactions from chemicals or components used during the assays. The detection of CLA in pure water in Germany showed that the concentration of CLA differs from province to province and differs from time of year, however, the commonly detected concentration of CLA in pure water was ng/L. KW - Immunoassay KW - Clarithromycin KW - Abwasser KW - Anthropogener Marker KW - Antibiotikum PY - 2024 SP - 1 EP - 51 PB - Berliner Hochschule für Technik CY - Berlin AN - OPUS4-61027 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Ecke, Alexander A1 - Westphalen, Tanja A1 - Retzmann, Anika A1 - Schneider, Rudolf T1 - Factors affecting the hydrolysis of the antibiotic amoxicillin in the aquatic environment N2 - The environmental fate of the frequently used broad-spectrum β-lactam antibiotic amoxicillin (AMX) is of high concern regarding the potential evolution of antimicrobial resistance (AMR). Moreover, it is known that AMX is prone to hydrolysis, yielding a variety of hydrolysis products (HPs) with yet unknown effects. Studies to identify those HPs and investigate their formation mechanisms have been reported but a long-term study on their stability in real water samples was missing. In this regard, we investigated the hydrolysis of AMX at two concentration levels in four distinct water types under three different storage conditions over two months. Concentrations of AMX and four relevant HPs were monitored by an LC-MS/MS method revealing pronounced differences in the hydrolysis rate of AMX in tap water and mineral water on the one hand (fast) and surface water on the other(slow). In this context, the occurrence, relative intensities, and stability of certain HPs are more dependent on the water type than on the storage condition. As clarified by ICP-MS, the main difference between the water types was the content of the metals copper and zinc which are supposed to catalyze AMX hydrolysis demonstrating an effective method to degrade AMX at ambient conditions. KW - β-lactam KW - Stability KW - Degradation KW - Hydrolysis products KW - LC-MS/MS KW - ICP-MS PY - 2023 DO - https://doi.org/10.1016/j.chemosphere.2022.136921 SN - 0045-6535 VL - 311 SP - 136921 PB - Elsevier Ltd. AN - OPUS4-56124 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Philipp, Rosemarie A1 - Lalere, B. A1 - Gantois, F. A1 - Sánchez, C. A1 - Sáez, A. A1 - Bebić, J. A1 - Banjanac, K. A1 - Alexopoulos, Ch. A1 - Kakoulides, E. A1 - Claramunt, A. V. A1 - Janko, P. A1 - Jotanovic, A. A1 - Hafner-Vuk, K. A1 - Buzoianu, M. A1 - Mihail, R. A1 - Fernández, M. M. A1 - Etcheverry, J. A1 - Mbithi Muendo, B. A1 - Muriira Karau, G. A1 - Silva, A. A1 - Almirón, F. A1 - Marajh, D. A1 - Makgatho, P. A1 - Visser, R. A1 - Alaskar, A. R. A1 - Alosaimi, A. A1 - Alrashed, M. A1 - Yılmaz, H. A1 - Ün, İ. A1 - Gündüz, S. A1 - Topal, K. A1 - Bilsel, M. A1 - Karasinski, J. A1 - Torres, J. T1 - Supplementary comparison study - measurement capabilities for the quantification of ethanol in water N2 - The accurate quantification of ethanol in water is essential for forensic applications such as blood and breath alcohol testing and for commercial applications such as the assessment of alcoholic beverages. The intercomparison EURAMET.QM-S14 is part of a capacity building project named ALCOREF “Certified forensic alcohol reference materials” that is running within the European Metrology Programme for Innovation and Research (EMPIR). The intercomparison should allow project partners and other interested National Metrology Institutes (NMIs) and Designated Institutes (DIs) to benchmark their analytical methods for the quantification of ethanol in water. The study plan was agreed by the European Association of National Metrology Institutes (EURAMET) Subcommittee Bio- and Organic Analysis (SCBOA) and the Organic Analysis Working Group (OAWG) of the Comité Consultatif pour la Quantité de Matière (CCQM) in February and April 2019, respectively. The intercomparison was coordinated by BAM. Two concentration levels relevant for the calibration and verification of evidential breath alcohol analysers were distributed to study participants. Fifteen institutes from 15 countries registered for the intercomparison and returned results. Participants mostly applied gas chromatography with flame ionisation detection (GC-FID) or mass spectroscopy (GC-MS), one participant used titrimetry and one participant employed a test bench for breath analyser calibration (“bubble train”). Participants did either in-house purity assessment of their commercial ethanol calibrants by Karl-Fischer titration, chromatographic methods, quantitative nuclear magnetic resonance spectroscopy (qNMR) and/or density measurements; or they used ethanol/water Certified Reference Materials (CRMs) from NMIs/DIs for calibration. CCQM OAWG agreed to use a consensus value from participants results that utilizes the reported uncertainties as Key Comparison Reference Value (KCRV). The Gaussian Random effects model with Hierarchical Bayesian solution (HB-REM) is a reasonable approach in this case. The KCRVs and Degrees of Equivalence (DoEs) were calculated with the NIST consensus builder version 1.2 Hierarchical Bayes procedure. Successful participation in the interlaboratory comparison has demonstrated the capabilities in determining the mass fraction of ethanol in aqueous matrices in the range 0.1 mg/g to 8 mg/g. Fourteen out of 15 participants have successfully quantified both samples, one participant successfully quantified only the lower-level (0.6 mg/g) sample. KW - Certified reference material KW - EURAMET KW - EMPIR KW - ALCOREF KW - Ethanol in water KW - Supplementary comparison PY - 2022 DO - https://doi.org/10.1088/0026-1394/59/1A/08015 VL - 59 IS - 1A SP - 08015 PB - IOP Publishing AN - OPUS4-55889 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Steinhäuser, Lorin A1 - Piechotta, Christian A1 - Westphalen, Tanja A1 - Kaminski, Katja T1 - Evaluation, comparison and combination of molecularly imprinted polymer solid phase extraction and classical solid phase extraction for the preconcentration of endocrine disrupting chemicals from representative whole water samples N2 - Estrogens are endocrine disrupting chemicals and of high concerns due to demonstrated harmful effects on the environment and low effect levels. For monitoring and risk assessment, several estrogens were included in the "watch list" of the EU Water Framework Directive which sets very low environmental quality standard (EQS) levels for Estrone (E1) and 17β-Estradiol (E2) of 0.4 ng L−1 and for 17α-Ethinylestradiol (EE2) of 0.035 ng L−1 requiring sensitive detection methods, as well as extensive sample preparation. A sensitive, derivatization-free, isotope dilution calibration HPLC-MS/MS method for a panel of 5 selected estrogens (including the 3 estrogens of the EU WFD watchlist), and a procedure for the reproducible preparation of a representative whole water matrix including mineral water, humic acids and solid particulate matter are presented. These are used in a diligent comparison of classical solid phase extraction (SPE) on hydrophilic-lipophilic balanced (HLB) phase to SPE on an estrogen-specific molecularly imprinted polymer phase (MISPE) for ultra-trace levels of the analytes (1–10 ng L−1). Additionally, a two-step procedure combining HLB SPE disks followed by MISPE is evaluated. The tow-step procedure provides superior enrichment, matrix removal and sample throughput while maintaining comparable recovery rates to simple cartridge SPE. Estimated method quantification limits (MQLs) range from 0.109–0.184 ng L−1 and thus meet EQS-levels for E1 and E2, but not EE2. The representative whole water matrix provides a reproducible comparison of sample preparation methods and lays the foundation for a certified reference material for estrogen analysis. The presented method will serve as the basis for an extended validation study to assess its use for estrogen monitoring in the environment. KW - Estrogens KW - Whole water samples KW - Molecular imprinted polymers KW - EU-WFD PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-563547 DO - https://doi.org/10.1016/j.talo.2022.100163 SN - 2666-8319 VL - 6 SP - 1 EP - 5 PB - Elsevier B.V. CY - Amsterdam, Niederlande AN - OPUS4-56354 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Riedel, Soraya T1 - Tracing toxic fumonisins - Fumonisin sensing by Aspergillus niger Fumonisin Amine Oxidase (AnFAO) and amperometric hydrogen peroxide detection N2 - Fumonisins are a class of toxic secondary metabolites produced by various Fusarium species. The two most important producers of fumonisins are F. verticillioides and F. proliferatum but also Aspergillus niger is known to produce fumonisins. Most frequently they occur on maize, but also other grains can be contaminated with this group of mycotoxins. Exposure to fumonisins by dietary intake can have serious health effects on farm animals such as equine leukoencephalomalacia and porcine pulmonary oedema and is associated with neural tube defects and esophageal cancer in humans. Thus, the European Commission sets legal limits for fumonisins in foodstuffs. The detection of fumonisins is frequently performed in laboratories by chromatographic methods, which are costly and require trained personnel. Simplifying the analysis is therefore a major goal using portable detection systems. Electrochemical enzymatic biosensors offer great promise to meet this demand. Here we report for the first time an enzymatic fumonisin sensing approach with amperometric detection. For this purpose, an Aspergillus niger fumonisin amine oxidase (AnFAO) catalyzing the oxidative deamination of fumonisins, producing hydrogen peroxide, was recombinantly produced in E. coli. For the first time, the specific enzyme activity of AnFAO was determined using a horseradish peroxidase-based fluorescence assay. It was found that the specific activity of AnFAO using 20 μM Fumonisin B1 as substrate is higher than for 20 μM Fumonisin B2 with 0.122 U mg-1 and 0.058 U mg-1, respectively. It was possible to show a dependence of enzyme activity with enzyme – and substrate-concentration. For fumonisin B1 detection, the enzyme was coupled covalently to magnetic particles and the enzymatically produced H2O2 was detected amperometrically in a flow injection system using Prussian blue carbon electrodes. The developed method allows to quantify fumonisin B1 concentrations down to 1.5 µM and demonstrates that the recombinantly produced AnFAO was able to deaminate different concentrations of fumonisin even in immobilized form. Thus, this enzyme is well suited to develop an enzyme based electrochemical biosensor for fumonisin contaminated food and feed. T2 - Posterschau Adlershofer Forschungsforum CY - Berlin, Germany DA - 11.11.2022 KW - Biosensor KW - Amperometry KW - Mycotoxins KW - Electrochemical sensor KW - Recombinant protein expression PY - 2022 N1 - Geburtsname von Riedel, Soraya: Höfs, S. - Birth name of Riedel, Soraya: Höfs, S. AN - OPUS4-56248 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Döring, Sarah T1 - Cost-effective method for full-length sequencing of monoclonal antibodies N2 - With the development of hybridoma technology, monoclonal antibodies are increasingly important in therapeutic and analytical applications. For recombinant expression in mammalian cells, knowledge of the variable regions of both, heavy (VH) and light (VL) chain, is a necessary prerequisite for generating expression plasmids. Furthermore, cloning antibody sequences including constant regions CH1 to CH3 and CL reduces impact of hybridoma cell loss and associated full natural antibody sequence leakage. Here, we show a cost-effective workflow for amplification of IgG antibody variable regions in combination with advanced methods for full-length cloning of monoclonal antibodies. T2 - Adlershofer Forschungsforum CY - Berlin, Germany DA - 11.11.2022 KW - Monoclonal Antibodies KW - DNA-Sequencing KW - PCR PY - 2022 AN - OPUS4-56275 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Frenzel, Olivia T1 - Identification of Metabolites and Transformation Products of Bisphenols N2 - Bisphenol A (BPA) is widely used in Polycarbonate (PC), Polyacrylic resins (PAR), Polysulfones (PSU), Epoxy resins (ER), and Polyetherimides (PEI). It is also used in recycled Polyvinyl chloride (PVC) [1–3]. These BPA-containing materials have a wide area of application, especially outside. All outdoor applications are exposed to a variety of environmental impacts, like temperature, solar radiation (physical influences), chemical influences (rain or ozone), biological influences (microorganisms), and mechanical influences (hail, sand). These impacts are damaging and aging the material which can be followed by leaching or migration of pollutants like Bisphenol A into the environment. Understanding the fate and behavior of the released pollutants is very important. Therefore, different transformation products of selected Bisphenols will be generated and analyzed. T2 - 33rd International Symposium on Chromatography – ISC 2022 CY - Budapest, Hungary DA - 18.09.2022 KW - Environment KW - Transformation products KW - Bisphenols KW - Metabolites KW - Wastewater PY - 2022 AN - OPUS4-56202 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Frenzel, Olivia T1 - Identification of transformation products and metabolites of selected Bisphenols N2 - Bisphenol A (BPA) is widely used in many Polymers. Many outdoor applications are made from BPA-based materials which are exposed to a variety of environmental impacts, like temperature, solar radiation, rain, and others. This could lead to damaging and aging of the material which might cause leaching or migration of pollutants into the environment. To understand the fate and behavior different transformation products of selected Bisphenols will be generated and analyzed. T2 - Umwelt2022 CY - Emden, Germany DA - 05.09.2022 KW - Environment KW - Bisphenols KW - Transformation products KW - Metabolites KW - Wastewater PY - 2022 AN - OPUS4-56203 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Braymer, Joseph J. T1 - Cytosolic Fe/S Protein Biogenesis -a focus on [2Fe-2S] proteins- N2 - Iron-Sulfur (Fe/S) protein biogenesis in the cytosol is an essential process for the proper maturation of many proteins and enzymes required for cellular function. Between the two types of Fe/S cofactors, recent work has been uncovering the dependencies of [2Fe-2S] cluster on the known Fe/S protein biogenesis machineries and how they may be trafficked in the cytosol. New insights will here be discussed in addition to the discovery of a newly identified cytosolic [2Fe-2S] binding protein. T2 - DFG SPP1927 Final Meeting CY - Potsdam, Germany DA - 29.09.2024 KW - Metalloproteins KW - Iron-sulfur clusters KW - Spectroscopy KW - Yeast PY - 2024 AN - OPUS4-61516 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Wittwer, Philipp T1 - Results of ILC Data Treatment N2 - Results of the interlaboratory comparison study for data treatment were presented. They show, that nearly all participants found all the problems in the data. However, only a few corrected the problems, therefore making it one possible point to focus on in the knowledge sharing program. T2 - AGM POLMO Meeting 2024 CY - Paris, France DA - 21.05.2024 KW - JNP POLMO KW - ILC KW - Ringversuch PY - 2024 AN - OPUS4-60166 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Guigues, Nathalie A1 - Uysal, Emrah A1 - Raveau, Sandrine A1 - Magar, Jérémie A1 - Billon, Gabriel A1 - Kahiluoto, Joonas A1 - Schneider, Rudolf A1 - Liv, Lokman A1 - Gençtürk Tosun, Serap A1 - Canteau, Gaëlle A1 - Lalere, Béatrice T1 - Insights on the validation of alternative tools for water quality monitoring: the case of on-site test kits, portable devices and continuous measuring devices N2 - Alternative Tools (AT) such as on-site test kits, on-site portable devices and continuous measuring devices, are useful to improve water quality assessment under EU directives, and water treatment processes, thus contributing to improving water management, as well as get insights on the dynamic of pollutants within water bodies. Although these tools have clear advantages (e.g. fast response allowing for real-time monitoring, ease-of-use, lower cost), they are perceived as less reliable than conventional analytical methods. Their alternative nature, innovative status, and non-standard operation mode require specific validation strategies that differ significantly from those of conventional analytical methods. Nevertheless, the validation of ATs, especially on-site test kits, portable devices and continuous measuring devices for water quality monitoring is crucial to support their acceptance, promote their use and make their application sustainable. In this paper, a validation procedure in 4 steps is proposed: (1) Comprehensive description of the AT; (2) Assessment of intrinsic metrological performance and operational factors within a single laboratory; (3) Assessment of inter-laboratory performances through an inter-laboratory comparison and, (4) Demonstration of the equivalence of results between the AT and a reference method. This paper discusses each step of the validation procedure, and examples to illustrate critical issues are provided. KW - Biosensoren KW - Schnelltests KW - Validierung PY - 2024 DO - https://doi.org/10.1007/s00769-023-01570-x SN - 0949-1775 VL - 29 IS - 7 SP - 163 EP - 173 PB - Springer Science and Business Media LLC CY - Berlin AN - OPUS4-60230 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Gregório, Bruno J.R. A1 - Ramos, Inês I. A1 - Marques, Sara S. A1 - Barreiros, Luísa A1 - Magalhães, Luís M. A1 - Schneider, Rudolf A1 - Segundo, Marcela A. T1 - Microcarrier-based fluorescent yeast estrogen screen assay for fast determination of endocrine disrupting compounds N2 - The presence of endocrine-disrupting compounds (EDCs) in water poses a significant threat to human and animal health, as recognized by regulatory agencies throughout the world. The Yeast Estrogen Screen (YES) assay is an excellent method to evaluate the presence of these compounds in water due to its simplicity and capacity to assess the bioaccessible forms/fractions of these compounds. In the presence of a compound with estrogenic activity, Saccharomyces cerevisiae cells, containing a lacZ reporter gene encoding the enzyme β-galactosidase, are induced, the enzyme is synthesised, and released to the extracellular medium. In this work, a YES-based approach encompassing the use of a lacZ reporter gene modified strain of S. cerevisiae, microcarriers as solid support, and a fluorescent substrate, fluorescein di-β-D-galactopyranoside, is proposed, allowing for the assessment of EDCs’ presence after only 2 h of incubation. The proposed method provided an EC50 of 0.17 ± 0.03 nM and an LLOQ of 0.03 nM, expressed as 17β-estradiol. The assessment of different EDCs provided EC50 values between 0.16 and 1.2 × 103 nM. After application to wastewaters, similar results were obtained for EDCs screening, much faster, compared to the conventional 45 h spectrophotometric procedure using a commercial kit, showing potential for onsite high-throughput screening of environmental contamination. KW - Biosensoren KW - YES assay KW - Endokrine Disruptoren PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602315 DO - https://doi.org/10.1016/j.talanta.2024.125665 VL - 271 SP - 1 EP - 7 PB - Elsevier B.V. CY - Amsterdam AN - OPUS4-60231 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Braymer, Joseph J. A1 - Stehling, Oliver A1 - Stümpfig, Martin A1 - Rösser, Ralf A1 - Spantgar, Farah A1 - Blinn, Catharina M. A1 - Mühlenhoff, Ulrich A1 - Pierik, Antonio J. A1 - Lill, Roland T1 - Requirements for the biogenesis of [2Fe-2S] proteins in the human and yeast cytosol N2 - The biogenesis of iron–sulfur (Fe/S) proteins entails the synthesis and trafficking of Fe/S clusters, followed by their insertion into target apoproteins. In eukaryotes, the multiple steps of biogenesis are accomplished by complex protein machineries in both mitochondria and cytosol. The underlying biochemical pathways have been elucidated over the past decades, yet the mechanisms of cytosolic [2Fe-2S] protein assembly have remained ill-defined. Similarly, the precise site of glutathione (GSH) requirement in cytosolic and nuclear Fe/S protein biogenesis is unclear, as is the molecular role of the GSH-dependent cytosolic monothiol glutaredoxins (cGrxs). Here, we investigated these questions in human and yeast cells by various in vivo approaches. [2Fe-2S] cluster assembly of cytosolic target apoproteins required the mitochondrial ISC machinery, the mitochondrial transporter Atm1/ABCB7 and GSH, yet occurred independently of both the CIA system and cGrxs. This mechanism was strikingly different from the ISC-, Atm1/ABCB7-, GSH-, and CIA-dependent assembly of cytosolic–nuclear [4Fe-4S] proteins. One notable exception to this cytosolic [2Fe-2S] protein maturation pathway defined here was yeast Apd1 which used the CIA system via binding to the CIA targeting complex through its C-terminal tryptophan. cGrxs, although attributed as [2Fe-2S] cluster chaperones or trafficking proteins, were not essential in vivo for delivering [2Fe-2S] clusters to either CIA components or target apoproteins. Finally, the most critical GSH requirement was assigned to Atm1-dependent export, i.e. a step before GSH-dependent cGrxs function. Our findings extend the general model of eukaryotic Fe/S protein biogenesis by adding the molecular requirements for cytosolic [2Fe-2S] protein maturation. KW - Biokorrosion KW - Hydrogenasen KW - Microbially Induced Corrosion PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602328 DO - https://doi.org/10.1073/pnas.2400740121 SN - 0027-8424 VL - 121 IS - 21 SP - 1 EP - 12 PB - Proceedings of the National Academy of Sciences CY - Washington D.C. AN - OPUS4-60232 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Proll, Günther A1 - Seidel, Michael A1 - Schneider, Rudolf T1 - Moderne bioanalytische Methoden für die schnelle Quantifizierung von Mikroschadstoffen und Pathogenen in Wasser N2 - Analytische Methoden für die Quantifizierung von Mikroschadstoffen (Synonym für Spurenstoffe) und Pathogenen im Wasser sind eine Grundvoraussetzung für die Umsetzung des Ziels Nr. 6 für Nachhaltige Entwicklung der UN, weltweit sauberes Wasser zur Verfügung zu stellen. Dafür sind schnelle, einfach zu bedienende und kostengünstige Überwachungssysteme notwendig. Antikörperbasierte Biosensoren haben das Potential, z.B. die Eliminationsleistung bezüglich kleiner organischer Moleküle durch die vierte Reinigungsstufe von Kläranlagen vor Ort zu überwachen. Darüber hinaus kommt modernen bioanalytischen Verfahren bei der Quantifizierung von Pathogenen eine immer wichtigere Rolle zu. Neben einer Bestandsaufnahme zu diesen Themen ist es das Ziel dieses Beitrags, die Anwendungsbarrieren von Biosensoren für die Wasseranalytik von Mikroschadstoffen abbauen zu helfen und die Vorzüge moderner bioanalytischer Methoden für die Quantifizierung von Pathogenen aufzuzeigen. KW - Biosensoren KW - Antikörper KW - Abwasser PY - 2024 SN - 1618-3258 VL - 30 IS - 2 SP - 66 EP - 70 PB - GDCh CY - Weinheim AN - OPUS4-60233 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Schmidt, Stephan A1 - Hoffmann, Holger A1 - Garbe, Leif-Alexander A1 - Harrer, Andrea A1 - Steiner, Markus A1 - Himly, Martin A1 - Schneider, Rudolf T1 - Re-assessment of monoclonal antibodies against diclofenac for their application in the analysis of environmental waters N2 - The non-steroidal anti-inflammatory drug (NSAID) diclofenac (DCF) is an important environmental contaminant occurring in surface waters all over the world, because, after excretion, it is not adequately removed from wastewater in sewage treatment plants. To be able to monitor this pollutant, highly efficient analytical methods are needed, including immunoassays. In a medical research project, monoclonal antibodies against diclofenac and its metabolites had been produced. Based on this monoclonal anti-DCF antibody, a new indirect competitive enzyme-linked immunosorbent assay (ELISA) was developed and applied for environmental samples. The introduction of a spacer between diclofenac and the carrier protein in the coating conjugate led to higher sensitivity. With a test midpoint of 3 mg L−1 and a measurement range of 1–30 mg L−1, the system is not sensitive enough for direct analysis of surface water. However, this assay is quite robust against matrix influences and can be used for wastewater. Without adjustment of the calibration, organic solvents up to 5%, natural organic matter (NOM) up to 10 mg L−1, humic acids up to 2.5 mg L−1, and salt concentrations up to 6 g L−1 NaCl and 75 mg L−1 CaCl2 are tolerated. The antibody is also stable in a pH range from 3 to 12. Cross-reactivity (CR) of 1% or less was determined for the metabolites 40-hydroxydiclofenac (40-OH-DCF), 5-hydroxydiclofenac (5-OH-DCF), DCF lactam, and other NSAIDs. Relevant cross-reactivity occurred only with an amide derivative of DCF, 6-aminohexanoic acid (DCF-Ahx), aceclofenac (ACF) and DCF methyl ester (DCF-Me) with 150%, 61% and 44%, respectively. These substances, however, have not been found in samples. Only DCF-acyl glucuronide with a cross-reactivity of 57% is of some relevance. For the first time, photodegradation products were tested for cross-reactivity. With the ELISA based on this antibody, water samples were analysed. In sewage treatment plant effluents, concentrations in the range of 1.9–5.2 mg L−1 were determined directly, with recoveries compared to HPLC-MS/MS averaging 136%. Concentrations in lakes ranged from 3 to 4.4 ng L−1 and were, after pre-concentration, determined with an average recovery of 100% KW - Antikörper KW - Immunoassay KW - Wasser PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602280 DO - https://doi.org/10.1039/d3ay01333b VL - 16 IS - 21 SP - 3349 EP - 3363 PB - Royal Society of Chemistry (RSC) CY - London AN - OPUS4-60228 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -