TY - CONF A1 - Oberbeckmann, Sonja T1 - Hunting for pigments in plastic biofilms from the Great Pacific Garbage Patch N2 - Each year, an immense amount of plastic debris enters marine ecosystems, much of which ends up in the Great Pacific Garbage Patch (GPGP). The plastic fragments are home to a diverse community of microorganisms, and while researchers have gained a better understanding of these marine plastic biofilms, we lack insights into the physiology and genomic potential of the bacteria that colonize them. Examining the lifestyle of plastic colonizers from the GPGP is particularly intriguing, as the high concentration of plastics in this accumulation zone might allow for a microbial adaptation to this unique man-made habitat. A range of pigmentation was observed in 67 isolated strains obtained directly from plastic pieces sampled from the GPGP surface water. Sequence comparison between the cultivated bacterial strains and the 16S rRNA gene amplicon dataset confirmed that most of the cultivates could also be captured through DNA-only methods. Whole genome analysis of four taxonomically diverse representatives revealed multiple carotenoid pathways, including those to produce less common glycosylated carotenoids, like sarcinaxanthin glucoside. Further, we identified a potentially new Rhodobacteraceae species containing a photosynthetic gene cluster (PGC). Absorption analysis confirmed the actual production of the carotenoids and bacteriochlorophyll a. Floating plastics represent a habitat with strong UV-light exposure, making the protection with antioxidant carotenoids as well as the ability to use light as an energy source highly beneficial traits for plastic colonizers. Our findings indicate, that the production of pigments is a common adaption mechanism for plastic-associated bacteria, and that plastic biofilms present a so far overlooked source of rare carotenoids and light-harvesting mechanisms. T2 - Annual Conference of The Association for General and Applied Microbiology (VAAM) CY - Göttingen, Germany DA - 10.09.2023 KW - Plastic biofilm KW - Phototrophic bacteria KW - Plastic pollution PY - 2023 AN - OPUS4-58443 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Scales, B. S. A1 - Hasenrück, C. A1 - Moldaenke, L. A1 - Hassa, J. A1 - Rückert-Reed, C. A1 - Rummel, C. A1 - Völkner, C. A1 - Rynek, R. A1 - Busche, T. A1 - Kalinowski, J. A1 - Jahnke, A. A1 - Schmitt-Jansen, M. A1 - Wendt-Potthoff, K. A1 - Oberbeckmann, Sonja T1 - Hunting for pigments in bacterial settlers of the Great Pacific Garbage Patch N2 - The Great Pacific Garbage Patch, a significant collection of plastic introduced by human activities, provides an ideal environment to study bacterial lifestyles on plastic substrates. We proposed that bacteria colonizing the floating plastic debris would develop strategies to deal with the ultravioletexposed substrate, such as the production of antioxidant pigments. We observed a variety of pigmentation in 67 strains that were directly cultivated from plastic pieces sampled from the Garbage Patch. The genomic analysis of four representative strains, each distinct in taxonomy, revealed multiple pathways for carotenoid production. These pathways include those that produce less common carotenoids and a cluster of photosynthetic genes. This cluster appears to originate from a potentially new species of the Rhodobacteraceae family. This represents the first report of an aerobic anoxygenic photoheterotrophic bacterium from plastic biofilms. Spectral analysis showed that the bacteria actively produce carotenoids, such as betacarotene and beta-cryptoxanthin, and bacteriochlorophyll a. Furthermore, we discovered that the genetic ability to synthesize carotenoids is more common in plastic biofilms than in the surrounding water communities. Our findings suggest that plastic biofilms could be an overlooked source of bacteria-produced carotenoids, including rare forms. It also suggests that photoreactive molecules might play a crucial role in bacterial biofilm communities in surface water. KW - Microplastics KW - Biofilm KW - Pigment KW - Microorganisms PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-605725 DO - https://doi.org/10.1111/1462-2920.16639 SN - 1462-2912 VL - 26 IS - 6 SP - e16639 PB - John Wiley & Sons Ltd. AN - OPUS4-60572 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Oberbeckmann, Sonja T1 - The Microplastic Microbiome N2 - Microplastics represent man-made and newly emerging surfaces in our ecosystems, where they interact with microorganisms. The ecosystem in focus of this presentation will be the aquatic environment. It will be portrayed, which microorganisms use microplastics as a habitat, how environmental factors shape this colonization, and why the biodegradation of plastics in the ocean is an overall unlikely process. We will also discuss whether potentially pathogenic microorganisms use microplastics as a raft. Finally, possible adaptation mechanisms of plastic-colonizing microorganisms will be presented, such as the production of photoreactive molecules. The microplastic microbiome has a large potential to harbor so far unknown species with curious traits, representing an exciting research topic for the future. T2 - Geomicrobiological and Geochemical Colloquium, GFZ CY - Potsdam, Germany DA - 20.02.2024 KW - Microplastics KW - Microbiome KW - Biofilm PY - 2024 AN - OPUS4-60203 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Song, Jessica X. A1 - Scales, Brittan A1 - Nguyen, Minh A1 - Westberg, Emelie A1 - Witalis, Bartosz A1 - Urban-Malinga, Barbara A1 - Oberbeckmann, Sonja T1 - Close encounters on a micro scale: microplastic sorption of polycyclic aromatic hydrocarbons and their potential effects on associated biofilm communities N2 - Background: Within systems as dynamic as the aquatic environment, it is crucial to address the impacts of an ever-growing network of emerging pollutants at their intersection. With previous research having demonstrated the capacity of microplastics (MPs) to sorb persistent organic pollutants, we ask in our study how different plastic polymers that are found throughout aquatic systems interact with polycyclic aromatic hydrocarbons (PAHs) and how this intersection of pollutants might impact the bacterial communities that form on MP surfaces. We performed an in situ incubation experiment at different sites along the Baltic Sea coast and through a PAH and 16S amplicon analysis, we investigated the sorption patterns of different substrates and their potential impacts on associated biofilm communities. Results: PAH sorption patterns of polyethylene (PE), polystyrene (PS), and aquaria stone were found to be dictated predominantly by substrate type and secondly by incubation site. While PE showed a general positive trend of sorption, stone rather leached PAHs into the environment, whereas the PAH levels of PS remained relatively unchanged following incubation. These sorption patterns correlated significantly with the composition of biofilm communities observed on all three substrate types after a 6-week incubation period. Strong correlations between specific PAHs and bacterial taxa indicate a direct relationship between these factors. Elevated levels of specific 3- and 4-ring PAHs on PE and PS coincided with higher proportions of specific taxa reportedly capable of hydrocarbon utilisation as well as a reduced diversity among biofilm communities. Conclusion: The findings in our study highlight the importance of investigating contaminants such as MPs holistically, including any associated substances, to fully understand how they impact surrounding ecological systems as they traverse the different compartments of the aquatic ecosystem. KW - Aquatic biofilms KW - Plastic pollution KW - PAH KW - Microbiome KW - Emerging contaminants PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-636658 DO - https://doi.org/10.1186/s40793-025-00747-w SN - 2524-6372 VL - 20 IS - 84 SP - 1 EP - 15 PB - BMC Part of Springer Nature AN - OPUS4-63665 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Oberbeckmann, Sonja T1 - Microplastic-microbiome interactions in aquatic ecosystems: a complex story N2 - As pervasive and persistent pollutants, microplastics exist alongside diverse microbial communities in nature. These hardy substrates accumulate rich polymeric matrices from their surroundings that in turn offer nutrition and protection to diverse communities and their theatre of activity, representing a new ecological niche. With our work, we aim to establish a holistic understanding of the interactions between microplastics and microorganisms within aquatic systems, and how these interactions shape their surrounding environment. In our research, we combine field sampling with in situ experiments, and apply high-throughput sequencing technologies to 16S genes and whole bacterial genomes. We demonstrate through our studies that biofilm communities exhibit no specificity to plastic polymer type but appear rather to be opportunistic colonizers more strongly shaped by spatial and temporal factors. While the polymer surface does not appear to elicit a selective effect on associated biofilms, our studies show that microplastics might shape communities in a different way. Based on our detection of carotenoid synthesis pathways and photosynthetic gene clusters among plastic biofilms, we postulate this new niche to shape a specific functional toolkit, adaptive among its members as a product of prolonged exposure to UV radiation at the sea’s surface. To fully assess the interactions between microplastics and microorganisms, however, one cannot consider plastics singularly but as a component within a more complex and interconnected system. It is known, for instance, that plastics can sorb significant concentrations of polycyclic aromatic hydrocarbons (PAH) in the environment. We show, in our work, that the PAH sorption patterns of microplastics correlate significantly with the structure of associated biofilm communities. Elevated concentrations of specific PAHs on microplastics coincided with the enrichment of selected taxa reportedly capable of hydrocarbon utilisation as well as a reduced diversity among associated biofilm communities. Here, we present a synthesis of our collective research on microplastic biofilms in the aquatic environment, the factors that shape them, and their interactions with nature. To fully comprehend how microplastics impact ecosystems, the entire substrate must be considered, including all chemicals integrated into the polymeric matrix as well as associated biofilms. T2 - SETAC Europe 35th Annual Meeting CY - Vienna, Austria DA - 11.05.2025 KW - Microplastics KW - Biofilms KW - PAH PY - 2025 AN - OPUS4-63154 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Oberbeckmann, Sonja T1 - The microplastic microbiome – an example for the intersection of biology and material research N2 - Biofilms live on the interface between human-made materials and the environment. Using aquatic plastics as an example, we explore their composition, their interactions with the plastic substrate, and their potentially useful functional roles. The presentation will further discuss the importance of considering plastic-associated pollutants in the investigation of such biofilms. T2 - Microbiological Colloquium ICBM CY - Oldenburg, Germany DA - 10.07.2025 KW - Microplastics KW - Microbiome KW - Biofilm PY - 2025 AN - OPUS4-63836 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Jahnke, Annika A1 - Beck, Aaron J. A1 - Becker, Richard L. A1 - Bedulina, Daria A1 - Braun, Ulrike A1 - Gerdts, Gunnar A1 - Hildebrandt, Lars A1 - Joerss, Hanna A1 - Klein, Ole A1 - Korduan, Janine A1 - Laforsch, Christian A1 - Lannig, Gisela A1 - Leslie, Heather A. A1 - Lips, Stefan A1 - Menger, Frank A1 - Nabi, Deedar A1 - Oberbeckmann, Sonja A1 - Primpke, Sebastian A1 - Pröfrock, Daniel A1 - Ramsperger, Anja F.R.M. A1 - Römerscheid, Mara A1 - Schmitt-Jansen, Mechthild A1 - Scholz-Böttcher, Barbara M. A1 - Tröppner, Oliver A1 - Wendt-Potthoff, Katrin A1 - Kühnel, Dana T1 - Perspective article: Multisectoral considerations to enable a circular economy for plastics N2 - Plastics are widely used but improper disposal and release lead to increasing global pollution, threatening environmental and human health. To address this issue, we suggest intersectoral collaboration to achieve zero plastic pollution. The outcomes of the project P-LEACH demonstrated the enormous complexity and range of potential toxic effects of plastic-associated chemicals and micro-/nanoplastics released into water from UV-weathered plastics. We initiated an intersectoral dialogue amongst scientists, manufacturers, regulators and representatives of civil society about how to alleviate the negative impacts of plastic pollution. Circular economy offers a framework for selecting non-toxic chemicals, extending product (re)use, and waste reduction, which act to alleviate pollution when applied to plastics. We suggest three measures to advance a circular economy of plastics: 1.) Increase simplicity of chemicals in virgin plastics combined with transparent information on the contents; 2.) Consider recyclability already in plastic material and product design; 3.) Foster communication through intersectoral dialogue. Major cornerstones are the provision of standardized, easy-to-use tools to characterize plastics and plastic leachates chemically and (eco)toxicologically, the enhancement of citizen awareness enabling them to make informed choices, the creation of economic incentives for manufacturers, and sector-specific regulations to provide products that safeguard environmental and human health. KW - Plastics KW - Circular economy KW - Cross-sectoral dialogue KW - Recyclability KW - Plastic-associated chemicals PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-638280 DO - https://doi.org/10.1016/j.jhazmat.2025.139326 SN - 0304-3894 VL - 496 SP - 1 EP - 9 PB - Elsevier B.V. AN - OPUS4-63828 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Li, Changchao A1 - Jin, Ling N. A1 - Bank, Michael S. A1 - Fan, Chunlan A1 - Gillings, Michael R. A1 - Zhao, Tingting A1 - Han, Yong A1 - Chen, Tian A1 - Gao, Meng A1 - Zhu, Dong A1 - Chen, Qinglin A1 - Zhu, Guibing A1 - Wang, Jie A1 - Wang, Lei A1 - Liu, Jian A1 - Yuan, Xianzheng A1 - Huang, Qishen A1 - Wang, Xiaofei A1 - Jahnke, Annika A1 - Brahney, Janice A1 - Allen, Steve A1 - Arp, Hans Peter H. A1 - Oberbeckmann, Sonja A1 - Bergmann, Melanie A1 - Pointing, Stephen B. A1 - Zhang, Daizhou A1 - Rillig, Matthias C. T1 - Potential planetary health impacts of the airborne plastisphere N2 - Microplastics are a ubiquitous yet long-overlooked component of airborne particulate matter. The surface of these plastic particles provides a unique niche for microorganisms, collectively known as the plastisphere. The plastisphere in aquatic and terrestrial ecosystems harbors microbial communities with distinct compositions, structures, and functional profiles, posing potential planetary health risks. The characteristics, fate, and impacts of the microbiome associated with airborne microplastics, however, remain largely unknown. In this review, we fill the knowledge gaps by exploring how airborne microplastics serve as key habitats for microorganisms and the potential planetary health implications. We show that microplastics are expected to carry and sustain microorganisms over long distances and timescales in air, potentially dispersing pathogens, antibiotic-resistance genes, and other bioactive agents across ecosystems. These interactions may perturb ecological processes and biological health on a planetary scale. Interdisciplinary research and innovative methodologies are urgently required to better understand and mitigate the airborne plastisphere risks. KW - Microplastics KW - Microbiome KW - Plastisphere PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-645551 DO - https://doi.org/10.1016/j.oneear.2025.101446 SN - 2590-3322 VL - 8 IS - 10 SP - 1 EP - 17 PB - Elsevier B.V. AN - OPUS4-64555 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Oberbeckmann, Sonja T1 - On the intersection of microbiome and material research: what can be achieved? N2 - Any surface in the environment acts as hotspot for microbial attachment and activity. These biofilms represent the interface between humans and the environment. While in the past biofilms were often seen as disturbance, we now start to understand the enormous potential of beneficial biofilms. They can be used in a broad range of applications and are sources for new microorganisms and traits. After all, biofilms represent a great example for a collaborative lifestyle. T2 - Bioeconomy Changemakers Festival, Hereon CY - Teltow, Germany DA - 14.03.2024 KW - Biofilm KW - Microbiome KW - Sustainability KW - Biosphere KW - Microplastics PY - 2024 AN - OPUS4-60202 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -