TY - CONF A1 - Bell, Jérémy A1 - Climent, Estela A1 - Gotor, Raúl A1 - Tobias, Charlie A1 - Martin-Sanchez, Pedro M. A1 - Rurack, Knut T1 - Dipstick coated with polystyrene-silica core-shell particles for the detection of microbiological fuel contamination N2 - Microbial contamination of fuels by fungi or bacteria poses risks such as corrosion and fuel system fouling, which can lead to critical problems in refineries and distribution systems and has a significant economic impact at every stage of the process. Many factors have been cited as being responsible for microbial growth, like the presence of water in the storage tanks. In fact, only 1 % water in a storage system is sufficient for the growth of microorganisms like bacteria or yeasts, as well as for the development of fungal biomass at the oil/water interface. This work presents a rapid test for the accurate determination of genomic DNA from aqueous fuel extracts. The detection is based on the use of polystyrene-mesoporous silica core-shell particles onto which modified fluorescent molecular beacons are covalently grafted. These beacons contain in the hairpin loop a target sequence highly conserved in all bacteria, corresponding to a fragment of the 16S ribosomal RNA subunit. The designed single-stranded molecular beacon contained fluorescein as an internal indicator and a quencher in its proximity when not hybridized. Upon hybridization in presence of the target sequence, the indicator and the quencher are spatially separated, resulting in fluorescence enhancement. To perform the assay the developed particles were deposited on different glass fibre strips to obtain a portable and sensitive rapid test. The assays showed that the presence of genomic DNA extracts from bacteria down to 50–70 μg L–1 induced a fluorescence response. The optical read-out was adapted for on-site monitoring by fitting a 3D-printed case to a conventional smartphone, taking advantages of the sensitivity of the CMOS detector. Such embedded assembly enabled the detection of genomic DNA in aqueous extracts down to the mg L–1 range and represents an interesting step toward on-site monitoring of fuel contamination. T2 - IMA 2023 CY - Chania, Greece DA - 18.09.2023 KW - Teststreifen KW - Test strip KW - Microbial KW - Mikrobiell KW - Smartphone KW - Particles KW - Partikeln PY - 2023 AN - OPUS4-58526 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Descalzo López, Ana Belén A1 - Zhu, Shengchao A1 - Fischer, Tobias A1 - Rurack, Knut ED - Demchenko, A.P. T1 - Optimization of the coupling of target recognition and signal generation N2 - Fluorescent reporters that literally "light up" upon binding of a target species are particularly interesting from an analytical point of view. This contribution introduces the main signaling concepts in fluorescent probe research, discusses strategies toward their optimization in terms of signal output, and highlights the wealth of alternative protocols that has been realized in the past two decades to create signaling systems with luminescence amplification features. KW - Dyes KW - Fluorescence KW - FRET KW - Molecular Recognition KW - Nanoparticles PY - 2010 SN - 978-3-642-04699-5 DO - https://doi.org/10.1007/978-3-642-04701-5_2 N1 - Serientitel: Springer Series on Fluorescence – Series title: Springer Series on Fluorescence VL - 9 IS - 1 SP - 41 EP - 106 PB - Springer AN - OPUS4-21941 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Rurack, Knut T1 - Fluorescent MIP (Molecularly Imprinted Polymer) Sensor Materials T2 - 1st International Caparica Conference on Chromogenic and Emissive Materials CY - Lisbon, Portugal DA - 2014-09-08 PY - 2014 AN - OPUS4-31354 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Rurack, Knut T1 - Novel Modular Sensors: Design of Efficient Probes for Various Analytes Utilizing the Phenoxazinone Chromophore T2 - Tag der Chemie CY - Potsdam, Germany DA - 2004-07-07 PY - 2004 AN - OPUS4-5353 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Rurack, Knut A1 - Monte, Christian T1 - Metallionen auf der Spur KW - Fluoreszenzsonden KW - Schwermetalle KW - Übergangsmetalle KW - Faseroptik PY - 2006 SN - 0344-1733 SN - 1610-8256 IS - 1/2 SP - 20 EP - 22 PB - Vogel CY - Würzburg AN - OPUS4-12179 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Ros-Lis, J.V. A1 - Martínez-Mánez, Ramon A1 - Rurack, Knut A1 - Sancenón, F. A1 - Soto, J. A1 - Spieles, Monika T1 - Highly Selective Chromogenic Signaling of Hg2+ in Aqueous Media at Nanomolar Levels Employing a Squaraine-Based Reporter N2 - A chromogenic chemosensor for Hg2+ detection in aqueous media at the nanomolar level has been developed from squaraine scaffoldings. KW - Quecksilber KW - Absorption KW - Fluoreszenz KW - Squarain-Farbstoffe KW - Aggregate KW - Chromoionophor PY - 2004 DO - https://doi.org/10.1021/ic049422q SN - 0020-1669 SN - 1520-510X VL - 43 IS - 17 SP - 5183 EP - 5185 PB - American Chemical Society CY - Washington, DC AN - OPUS4-4124 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Rurack, Knut A1 - Kollmannsberger, M. A1 - Daub, J. T1 - Molekulares Schalten im nahen Infrarot (NIR) mit einem funktionalisierten Bordipyrromethen-Farbstoff KW - Molekularer Schalter KW - Solvatochromie KW - Donor-Akzeptor-System KW - Elektrochromie PY - 2001 DO - https://doi.org/10.1002/1521-3757(20010119)113:2<396::AID-ANGE396>3.0.CO;2-W SN - 0044-8249 SN - 0932-2140 SN - 1521-3757 VL - 113 IS - 2 SP - 396 EP - 399 PB - Wiley-VCH CY - Weinheim AN - OPUS4-1077 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Climent Terol, Estela A1 - Gotor, Raul A1 - Tobias, Charlie A1 - Bell, Jérémy A1 - Martin-Sanchez, Pedro A1 - Rurack, Knut T1 - Dip Sticks Embedding Molecular Beacon-Functionalized Core−Mesoporous Shell Particles for the Rapid On-Site Detection of Microbiological Fuel Contamination N2 - Microbial contamination of fuels by fungi and bacteria presents risks of corrosion and fuel system fouling. In this work, a rapid test for the determination of microbial genomic DNA from aqueous fuel extracts is presented. It combines test strips coated with polystyrene core/mesoporous silica shell particles, to the surface of which modified fluorescent molecular beacons are covalently grafted, with a smartphone detection system. In the hairpin loop, the beacons incorporate a target sequence highly conserved in all bacteria, corresponding to a fragment of the 16S ribosomal RNA gene, which is also present to a significant extent in the 18S rRNA gene of fungi, allowing for broadband microbial detection. In the developed assay, the presence of genomic DNA extracts from bacteria and fungi down to ca. 20−50 μg L−1 induced a distinct fluorescence response. The optical read-out was adapted for on-site monitoring by combining a 3D-printed case with a conventional smartphone, taking advantage of the sensitivity of contemporary complementary metal oxide semiconductor (CMOS) detectors. Such an embedded assembly allowed to detect microbial genomic DNA in aqueous extracts down to ca. 0.2−0.7 mg L−1 and presents an important step toward the on-site uncovering of fuel contamination in a rapid and simple fashion. KW - Bacteria KW - Fungi KW - Rapid test KW - Fluorescence KW - Smartphone KW - Biofouling PY - 2020 DO - https://doi.org/10.1021/acssensors.0c01178 SN - 2379-3694 VL - 6 IS - 1 SP - 27 EP - 34 PB - American Chemical Society CY - Washington, DC AN - OPUS4-51956 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Rurack, Knut T1 - Sensory Molecularly Imprinted Polymers for the Selective Detection of Carboxylates through Fluorescence Modulation T2 - Europt(r)ode XII CY - Athens, Greece DA - 2014-04-13 PY - 2014 AN - OPUS4-30786 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Shen, Z. A1 - Uno, H. A1 - Ono, N. A1 - Rurack, Knut A1 - Daub, J. T1 - Synthesis, electrochemical and spectroscopic studies on a new class of boron dipyrromethene based fluoroionophores PY - 2002 VL - 18 SP - 100 EP - 102 (Suppl. A) PB - Elsevier CY - Amsterdam AN - OPUS4-2082 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -