TY - JOUR A1 - Schoetz, U. A1 - Deliolanis, N.C. A1 - Ng, D. A1 - Pauli, Jutta A1 - Resch-Genger, Ute A1 - Kühn, E. A1 - Heuer, S. A1 - Beisker, W. A1 - Köster, R.W. A1 - Zitzelsberger, H. A1 - Caldwell, R.B. T1 - Usefulness of a Darwinian system in a biotechnological application: evolution of optical window fluorescent protein variants under selective pressure N2 - With rare exceptions, natural evolution is an extremely slow process. One particularly striking exception in the case of protein evolution is in the natural production of antibodies. Developing B cells activate and diversify their immunoglobulin (Ig) genes by recombination, gene conversion (GC) and somatic hypermutation (SHM). Iterative cycles of hypermutation and selection continue until antibodies of high antigen binding specificity emerge (affinity maturation). The avian B cell line DT40, a cell line which is highly amenable to genetic manipulation and exhibits a high rate of targeted integration, utilizes both GC and SHM. Targeting the DT40's diversification machinery onto transgenes of interest inserted into the Ig loci and coupling selective pressure based on the desired outcome mimics evolution. Here we further demonstrate the usefulness of this platform technology by selectively pressuring a large shift in the spectral properties of the fluorescent protein eqFP615 into the highly stable and advanced optical imaging expediting fluorescent protein Amrose. The method is advantageous as it is time and cost effective and no prior knowledge of the outcome protein's structure is necessary. Amrose was evolved to have high excitation at 633 nm and excitation/emission into the far-red, which is optimal for whole-body and deep tissue imaging as we demonstrate in the zebrafish and mouse model. KW - Fluorescent protein KW - Quantum yield PY - 2014 DO - https://doi.org/10.1371/journal.pone.0107069 SN - 1932-6203 VL - 9 IS - 9 SP - e107069-1 EP - e107069-12 PB - PubMed Central AN - OPUS4-31976 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Pauli, Jutta A1 - Licha, K. A1 - Berkemeyer, Janis Manuel A1 - Grabolle, Markus A1 - Spieles, Monika A1 - Wegner, N. A1 - Welker, P. A1 - Resch-Genger, Ute T1 - New fluorescent labels with tunable hydrophilicity for the rational design of bright optical probes for molecular imaging N2 - The rational design of bright optical probes and dye–biomolecule conjugates in the NIR-region requires fluorescent labels that retain their high fluorescence quantum yields when bound to a recognition unit or upon interaction with a target. Because hydrophilicity-controlled dye aggregation in conjunction with homo-FRET presents one of the major fluorescence deactivation pathways in dye–protein conjugates, fluorescent labels are required that enable higher labeling degrees with minimum dye aggregation. Aiming at a better understanding of the factors governing dye–dye interactions, we systematically studied the signal-relevant spectroscopic properties, hydrophilicity, and aggregation behavior of the novel xS-IDCC series of symmetric pentamethines equipped with two, four, and six sulfonic acid groups and selected conjugates of these dyes with IgG and the antibody cetuximab (ctx) directed against the cancer-related epidermal growth factor (EGF) receptor in comparison to the gold standard Cy5.5. With 6S-IDCC, which displays a molar absorption coefficient of 190 000 M–1 cm–1 and a fluorescence quantum yield (Φf) of 0.18 in aqueous media like PBS and nearly no aggregation, we could identify a fluorophore with a similarly good performance as Cy5.5. Bioconjugation of 6S-IDCC and Cy5.5 yielded highly emissive targeted probes with comparable Φf values of 0.29 for a dye-to-protein (D/P) ratio <1 and a reduced number of protein-bound dye aggregates in the case of 6S-IDCC. Binding studies of the ctx conjugates of both dyes performed by fluorescence microscopy and FACS revealed that the binding strength between the targeted probes and the EGF receptor at the cell membrane is independent of D/P ratio. These results underline the importance of an application-specific tuning of dye hydrophilicity for the design of bright fluorescent reporters and efficient optical probes. Moreover, we could demonstrate the potential of fluorescence spectroscopy to predict the size of fluorescence signals resulting for other fluorescence techniques such as FACS. KW - Cyanine KW - Cetuximab KW - IgG KW - Protein labeling KW - Fluorescence quantum yield KW - Hydrophilicity KW - Dimerization constant PY - 2013 DO - https://doi.org/10.1021/bc4000349 SN - 1043-1802 SN - 1520-4812 VL - 24 IS - 7 SP - 1174 EP - 1185 CY - Washington, DC AN - OPUS4-29076 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauli, Jutta T1 - Brilliant and Functional Herceptin Conjugates with a Remarkably High Number of Bound Fluorophores T2 - MOBI 2013 CY - Heidelberg, Germany DA - 2013-10-28 PY - 2013 AN - OPUS4-29576 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Würth, Christian A1 - Grabolle, Markus A1 - Pauli, Jutta A1 - Spieles, Monika A1 - Resch-Genger, Ute T1 - Relative and absolute determination of fluorescence quantum yields of transparent samples N2 - Luminescence techniques are among the most widely used detection methods in the life and material sciences. At the core of these methods is an ever-increasing variety of fluorescent reporters (i.e., simple dyes, fluorescent labels, probes, sensors and switches) from different fluorophore classes ranging from small organic dyes and metal ion complexes, quantum dots and upconversion nanocrystals to differently sized fluorophore-doped or fluorophore-labeled polymeric particles. A key parameter for fluorophore comparison is the fluorescence quantum yield (Φf), which is the direct measure for the efficiency of the conversion of absorbed light into emitted light. In this protocol, we describe procedures for relative and absolute determinations of Φf values of fluorophores in transparent solution using optical methods, and we address typical sources of uncertainty and fluorophore class-specific challenges. For relative determinations of Φf, the sample is analyzed using a conventional fluorescence spectrometer. For absolute determinations of Φf, a calibrated stand-alone integrating sphere setup is used. To reduce standard-related uncertainties for relative measurements, we introduce a series of eight candidate quantum yield standards for the wavelength region of ~350–950 nm, which we have assessed with commercial and custom-designed instrumentation. With these protocols and standards, uncertainties of 5–10% can be achieved within 2 h. PY - 2013 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-294202 DO - https://doi.org/10.1038/nprot.2013.087 SN - 1754-2189 SN - 1750-2799 VL - 8 IS - 8 SP - 1535 EP - 1550 PB - Nature Publishing Group CY - Basingstoke AN - OPUS4-29420 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Würth, Christian A1 - Lochmann, Cornelia A1 - Spieles, Monika A1 - Pauli, Jutta A1 - Hoffmann, Katrin A1 - Schüttrigkeit, T. A1 - Franzl, T. A1 - Resch-Genger, Ute T1 - Evaluation of a commercial integrating sphere setup for the determination of absolute photoluminescence quantum yields of dilute dye solutions N2 - The commercial availability of stand-alone setups for the determination of absolute photoluminescence quantum yields (φf) in conjunction with the increasing use of integrating sphere accessories for spectrofluorometers is expected to have a considerable influence not only on the characterization of chromophore systems for use in optical and opto-electronic devices, but also on the determination of this key parameter for (bio)analytically relevant dyes and functional luminophores. Despite the huge potential of systems measuring absolute φf values and the renewed interest in dependable data, evaluated protocols for even the most elementary case, the determination of the fluorescence quantum yield of transparent dilute solutions of small organic dyes with integrating sphere methods, are still missing. This encouraged us to evaluate the performance and sources of uncertainty of a simple commercial integrating sphere setup with dilute solutions of two of the best characterized fluorescence quantum yield standards, quinine sulfate dihydrate and rhodamine 101, strongly differing in spectral overlap between absorption and emission. Special attention is dedicated to illustrate common pitfalls of this approach, thereby deriving simple procedures to minimize measurement uncertainties and improve the comparability of data for the broad community of users of fluorescence techniques. KW - Lifetime KW - Fluorescence KW - Luminescence KW - Quantum yield KW - Quantum efficiency KW - Integrating sphere KW - Reabsorption KW - Rhodamine 101 KW - Quinine sulfate dihydrate KW - Method KW - Photoluminescence KW - Standard KW - Emission KW - Spectral correction KW - Excitation KW - Anisotropy PY - 2010 DO - https://doi.org/10.1366/000370210791666390 SN - 0003-7028 SN - 1943-3530 VL - 64 IS - 7 SP - 733 EP - 741 PB - Society for Applied Spectroscopy CY - Frederick, Md. AN - OPUS4-22089 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Pauli, Jutta A1 - Brehm, Robert A1 - Spieles, Monika A1 - Kaiser, W.A. A1 - Hilger, I. A1 - Resch-Genger, Ute T1 - Novel fluorophores as building blocks for optical probes for in vivo near infrared fluorescence (NIRF) imaging N2 - Aiming at the identification of new fluorescent reporters for targeted optical probes, we assessed the application-relevant features of a novel asymmetric cyanine, DY-681, in comparison to the only clinically approved dye indocyanine green (ICG), the golden imaging standard Cy5.5, and the asymmetric cyanine DY-676 successfully exploited by us for the design of different contrast agents. This comparison included the analysis of the spectroscopic properties of the free fluorophores and their thermal stability in aqueous solution as well as their cytotoxic potential. In addition, the absorption and emission features of IgG-conjugated DY-681 were examined. The trimethine DY-681 exhibited spectral features closely resembling that of the pentamethine Cy5.5. Its high thermal stability in phosphate buffer saline (PBS) solution in conjunction with its low cytotoxicity, reaching similar values as determined for Cy5.5 and DY-676, renders this dye more attractive as ICG and, due to its improved fluorescence quantum yield in PBS, also superior to DY-676. Although in PBS, Cy5.5 was still more fluorescent, the fluorescence quantum yields (Φf) of DY-681 and Cy5.5 in PBS containing 5 mass-% bovine serum albumin (BSA) were comparable. Labeling experiments with DY-681 and the model antibody IgG revealed promisingly high Φf values of the bioconjugated dye. KW - Fluorescence KW - Cyanine dye KW - Cytotoxicity KW - Stability KW - In vivo fluorescence imaging KW - Quantum yield KW - Contrast agent KW - Optical probe PY - 2010 DO - https://doi.org/10.1007/s10895-010-0603-7 SN - 1053-0509 SN - 1573-4994 VL - 20 IS - 3 SP - 681 EP - 693 PB - Plenum Publ. Corp. CY - New York, NY AN - OPUS4-21401 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Heckmann, A. A1 - Dümmler, S. A1 - Pauli, Jutta A1 - Margraf, M. A1 - Köhler, J. A1 - Stich, D. A1 - Lambert, C. A1 - Fischer, I. A1 - Resch-Genger, Ute T1 - Highly fluorescent open-shell NIR dyes: the time-dependence of back electron transfer in triarylamine-perchlorotriphenylmethyl radicals KW - Triarylamine-perchlorotriphenylmethyl radical KW - Dono-acceptor compounds KW - CT state KW - Fluorescence quantum KW - Yield KW - Life time PY - 2009 DO - https://doi.org/10.1021/jp908425w SN - 1932-7447 SN - 1089-5639 VL - 113 SP - 20958 EP - 20966 PB - Soc. CY - Washington, DC AN - OPUS4-20757 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Pauli, Jutta A1 - Wycisk, V. A1 - Welker, P. A1 - Justies, A. A1 - Resch-Genger, Ute A1 - Haag, R. A1 - Licha, K. T1 - Glycerol-Based Contrast Agents: A Novel Series of Dendronized Pentamethine Dyes N2 - The synthesis of water-soluble dyes, which absorb and emit in the range between 650 and 950 nm and display high extinction coefficients (ε) as well as high fluorescence quantum yields (Φf), is still a demand for optical imaging. We now present a synthetic route for the preparation of a new group of glycerol-substituted cyanine dyes from dendronized indole precursors that have been functionalized as Nhydroxysuccinimide (NHS) esters. High Φf values of up to 0.15 and extinction coefficients of up to 189 000 L mol−1 cm−1 were obtained for the pure dyes. Furthermore, conjugates of the new dendronized dyes with the antibody cetuximab (ctx) that were directed against the epidermal growth factor receptor (EGFR) of tumor cells could be prepared with dye to protein ratios between 0.3 and 2.2 to assess their potential as imaging probes. For the first time, ctx conjugates could be achieved without showing a decrease in Φf and with an increasing labeling degree that exceeded the value of the pure dye even at a labeling degree above 2. The incorporation of hydrophilically and sterically demanding dendrimers into cyanines prevented dimer formation after covalent conjugation to the antibody. The binding functionality of the resulting ctx conjugates to the EGFR was successfully demonstrated by cell microscopy studies using EGFR expressing cell lines. In summary, the combination of hydrophilic glycerol dendrons with reactive dye labels has been established for the first time and is a promising Approach toward more powerful fluorescent labels with less dimerization. KW - Dye KW - Quantum yield KW - Fluorescence KW - Contrast agent KW - Extinction coefficient PY - 2015 DO - https://doi.org/10.1021/acs.bioconjchem.5b00097 SN - 1043-1802 VL - 26 SP - 773 EP - 781 PB - ACS Publications CY - Washington AN - OPUS4-38880 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Mathejczyk, J. A1 - Pauli, Jutta A1 - Dullin, C. A1 - Napp, J. A1 - Tietze, L.-F. A1 - Kessler, H. A1 - Resch-Genger, Ute A1 - Alves, F. T1 - Spectroscopically well-characterized RGD optical probe as a prerequisite for lifetime-gated tumor imaging N2 - Labeling of RGD peptides with near-infrared fluorophores yields optical probes for noninvasive imaging of tumors overexpressing ανβ3 integrins. An important prerequisite for optimum detection sensitivity in vivo is strongly absorbing and highly emissive probes with a known fluorescence lifetime. The RGD-Cy5.5 optical probe was derived by coupling Cy5.5 to a cyclic arginine–glycine–aspartic acid–D-phenylalanine–lysine (RGDfK) peptide via an aminohexanoic acid spacer. Spectroscopic properties of the probe were studied in different matrices in comparison to Cy5.5. For in vivo imaging, human glioblastoma cells were subcutaneously implanted into nude mice, and in vivo fluorescence intensity and lifetime were measured. The fluorescence quantum yield and lifetime of Cy5.5 were found to be barely affected on RGD conjugation but dramatically changed in the presence of proteins. By time domain fluorescence imaging, we demonstrated specific binding of RGD-Cy5.5 to glioblastoma xenografts in nude mice. Discrimination of unspecific fluorescence by lifetime-gated analysis further enhanced the detection sensitivity of RGD-Cy5.5-derived signals. We characterized RGD-Cy5.5 as a strongly emissive and stable probe adequate for selective targeting of ανβ3 integrins. The specificity and thus the overall detection sensitivity in vivo were optimized with lifetime gating, based on the previous determination of the probés fluorescence lifetime under application-relevant conditions. KW - Time domain near-infrared fluorescence (NIRF) imaging KW - Fluorescence KW - Lifetime KW - Quantum yield KW - RGD-Cy5.5 KW - Spectroscopic analysis PY - 2011 DO - https://doi.org/10.2310/7290.2011.00018 SN - 1535-3508 SN - 1536-0121 VL - 10 IS - 6 SP - 469 EP - 480 PB - Decker CY - Hamilton, Ont. AN - OPUS4-25711 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Pauli, Jutta A1 - Ramírez, A. A1 - Crasselt, C. A1 - Schmidt, W. A1 - Resch-Genger, Ute T1 - Utilizing optical spectroscopy and 2',7'-difluorofluorescein to characterize the early stages of cement hydration N2 - The increasingly sophisticated nature of modern, more environmentally friendly cementitious binders requires a better understanding and control particularly of the complex, dynamic processes involved in the early phase of cement hydration. In-situ monitoring of properties of a constantly changing system over a defined period of time calls for simple, sensitive, fast, and preferably also non-invasive methods like optical spectroscopy KW - Flourescence KW - Optical probe KW - Sensor KW - Dye KW - Flourescin KW - Photophysics KW - PH KW - Quantum yield KW - Quality assurance KW - Mechanism KW - Cement KW - Concrete KW - Building material KW - Hydration KW - Process monitoring PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-537176 DO - https://doi.org/10.1088/2050-6120/ac2da0 SN - 2050-6120 VL - 10 IS - 1 SP - 2 EP - 13 PB - IOP Science AN - OPUS4-53717 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Resch-Genger, Ute A1 - Behnke, Thomas A1 - Brehm, Robert A1 - Grabolle, Markus A1 - Hennig, Andreas A1 - Hoffmann, Angelika A1 - Hoffmann, Katrin A1 - Linck, Lena A1 - Lochmann, Cornelia A1 - Pauli, Jutta A1 - Spieles, Monika A1 - Würth, Christian T1 - Funktionelle Chromophor-Systeme, innovative Validierungskonzepte und rückführbare Standards für die fluoreszenzbasierte multiparametrische Bioanalytik N2 - Unter dem Motto „Innovation und Qualitätssicherung in der (Bio)Analytik“ werden in der Arbeitsgruppe Fluoreszenzspektroskopie der BAM, Bundesanstalt für Materialforschung und -prüfung, funktionelle Chromophor-Systeme, einfache Signalverstärkungs- und Multiplexingstrategien sowie innovative Validierungs- und rückführbare Standardisierungskonzepte für verschiedene fluorometrische Messgrößen und Methoden entwickelt. Im Mittelpunkt stehen dabei molekulare Fluorophore, Nanokristalle mit größenabhängigen optischen Eigenschaften (sogenannte Quantenpunkte, QDs) und fluoreszierende Partikel variabler Größe sowie Sonden und Sensormoleküle für neutrale und ionische Analyte und für die Charakterisierung von funktionellen Gruppen. Dabei erfolgen auch methodische Entwicklungen für die Fluoreszenzspektroskopie, die Fluoreszenzmikroskopie, die Milcrofluorometrie, die Sensorik und die Mikroarraytechnologie. Ziele sind u. a. das Design und die Untersuchung von multiplexfähigen selektiven und sensitiven Sonden für die Biomarkeranalytik, die Entwicklung von Methoden zur Charakterisierung der signalrelevanten Eigenschaften dieser Chromophor-Systeme und zur Charakterisierung von funktionellen Gruppen an Oberflächen und ihre Validierung sowie die Entwicklung und Bereitstellung von formatadaptierbaren, flexibel ersetzbaren Standards für die fluoreszenzbasierte Multiparameteranalytik. T2 - 5. Senftenberger Innovationsforum Multiparameteranalytik CY - Senftenberg, Deutschland DA - 10.03.2011 KW - Multiparametric KW - Multiplexing KW - Fluorescence KW - Nanoparticles KW - NIR dyes KW - Surface analysis KW - Quantum yield KW - Quantum dot KW - Lifetime PY - 2011 SP - 86 EP - 108 CY - Senftenberg AN - OPUS4-23635 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Würth, Christian A1 - Pauli, Jutta A1 - Lochmann, Cornelia A1 - Spieles, Monika A1 - Resch-Genger, Ute T1 - Integrating sphere setup for the traceable measurement of absolute photoluminescence quantum yields in the near infrared N2 - There is an increasing interest in chromophores absorbing and emitting in the near-infrared (NIR) spectral region, e.g., for applications as fluorescent reporters for optical imaging techniques and hence, in reliable methods for the characterization of their signal-relevant properties like the fluorescence quantum yield (Φf) and brightness. The lack of well established Φf standards for the NIR region in conjunction with the need for accurate Φf measurements in transparent and scattering media encouraged us to built up an integrating sphere setup for spectrally resolved measurements of absolute fluorescence traceable to radiometric scales. Here, we present the design of this setup and its characterization and validation including an uncertainty budget for the determination of absolute Φf in the visible and NIR. To provide the basis for better measurements of Φf in the spectral window from ca. 600 to 1000 nm used, e.g., for optical imaging, the absolute Φf of a set of NIR chromophores covering this spectral region are measured and compared to relative values obtained using rhodamine 101 as Φf standard. Additionally, the absolute Φf values of some red dyes that are among the most commonly used labels in the life sciences are presented as well as the absolute quantum yield of an optical probe for tumor imaging. KW - Fluorescence KW - Photoluminescence KW - Quantum yield KW - Dye KW - Uncertainty KW - Absolute quantum yield KW - Method comparison KW - Integrating sphere KW - NIR KW - Standards KW - Quantum yield standards PY - 2012 DO - https://doi.org/10.1021/ac2021954 SN - 0003-2700 SN - 1520-6882 VL - 84 IS - 3 SP - 1345 EP - 1352 PB - American Chemical Society CY - Washington, DC AN - OPUS4-25504 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Richter, Maria A1 - Güttler, Arne A1 - Pauli, Jutta A1 - Vogel, K. A1 - Homann, Christian A1 - Würth, Christian A1 - Resch-Genger, Ute T1 - Extending certified spectral fluorescence standards for the calibration and performance validation of fluorescence instruments to the NIR—closing the gap from 750 to 940 nm with two novel NIR dyes N2 - Fluorescence techniques such as fluorescence spectroscopy, microfluorometry, and fluorescence microscopy, providing spectral, intensity, polarization, and lifetime information, are amongst the most broadly utilized analytical methods in the life and materials sciences. However, the measured fluorescence data contain sample- and instrument-specific contributions, which hamper their comparability across instruments and laboratories. Comparable, instrument-independent fluorescence data require the determination of the fluorescence instrument’s wavelength-dependent spectral responsivity, also termed emission correction curve, for the same instrument settings as those used for the fluorescence measurements as a prerequisite for the subsequent correction of the measured instrument-specific data. Such a spectral correction is essential for the performance comparison of different fluorescent labels and reporters, quantitative fluorescence measurements, the determination of the fluorescence quantum yield, and the spectroscopic measure for the fluorescence efficiency of a fluorophore. Simple-to-use tools for obtaining emission correction curves are chromophore-based reference materials (RMs), referred to as fluorescence standards, with precisely known, preferably certified instrument-independent fluorescence spectra. However, for the increasingly used near-infrared (NIR) wavelength region >700 nm, at present, no spectral fluorescence standards are available. To close this gap, we developed two novel spectral fluorescence standards, BAM F007 and BAM-F009, with broad emission bands from about 580 to 940 nm in ethanolic solution. These liquid fluorescence standards currently under certification, which will be released in 2025, will expand the wavelength range of the already available certified Calibration Kit BAM F001b-F005b from about 300–730 to 940 nm. In this research article, we will detail the criteria utilized for dye and matrix selection and the homogeneity and stability tests accompanying dye certification as well as the calculation of the wavelength-dependent uncertainty budgets of the emission spectra BAM F007 and BAM-F009, determined with the traceably calibrated BAM reference spectrofluorometer. These fluorescence standards can provide the basis for comparable fluorescence measurements in the ultraviolet, visible, and NIR for the fluorescence community. KW - Quality assurance KW - Reference material KW - Fluorescence KW - Dye KW - Traceability KW - Metrology KW - Calibration KW - Reference data KW - Reference product KW - Digital certificate KW - NIR KW - Instrument performance validation PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-626317 DO - https://doi.org/10.1007/s00216-024-05723-w SN - 1618-2650 SP - 1 EP - 15 PB - Springer AN - OPUS4-62631 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauli, Jutta A1 - Brehm, Robert A1 - Grabolle, Markus A1 - Behnke, Thomas A1 - Mathejczyk, J. A1 - Hamann, F. A1 - Alves, F. A1 - Hilger, I. A1 - Resch-Genger, Ute ED - Achilefu, S. ED - Raghavachari, R. T1 - Dye-biomolecule conjugates and NIR-fluorescent particles for targeting of disease-related biomarkers N2 - Indispensable for fluorescence imaging are highly specific and sensitive molecular probes that absorb and emit in the near infrared (NIR) spectral region and respond to or target molecular species or processes. Here, we present approaches to targeted fluorescent probes for in vivo imaging in the intensity and lifetime domain exploiting NIR dyes. Screening schemes for the fast identification of suitable fluorophores are derived and design criteria for highly emissive optical probes. In addition, as a signal amplification strategy that enables also the use of hydrophobic NIR fluorophores as fluorescent reporters, first steps towards versatile strategies for the preparation of NIR-fluorescent polymeric particles are presented that can be utilized also for the design of targeted and analyte-responsive probes. KW - Fluorescence KW - Fluorescence lifetime imaging KW - Near-infrared KW - NIR KW - Cyanine dye KW - Cancer KW - In vivo imaging KW - Aggregation KW - Nanoparticle PY - 2011 DO - https://doi.org/10.1117/12.876828 SN - 1605-7422 N1 - Serientitel: Proceedings of SPIE – Series title: Proceedings of SPIE IS - 7910 SP - 791014-1 EP - 791014-15 AN - OPUS4-24353 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hamann, F. A1 - Brehm, Robert A1 - Pauli, Jutta A1 - Grabolle, Markus A1 - Frank, W. A1 - Kaiser, W.A. A1 - Fischer, D. A1 - Resch-Genger, Ute A1 - Hilger, I. T1 - Controlled modulation of serum protein binding and biodistribution of asymmetric cyanine dyes by variation of the number of sulfonate groups N2 - To assess the suitability of asymmetric cyanine dyes for in vivo fluoro-optical molecular imaging, a comprehensive study on the influence of the number of negatively charged sulfonate groups governing the hydrophilicity of the DY-67x family of asymmetric cyanines was performed. Special attention was devoted to the plasma protein binding capacity and related pharmacokinetic properties. Four members of the DY-67x cyanine family composed of the same main chromophore, but substituted with a sequentially increasing number of sulfonate groups (n = 1−4; DY-675, DY-676, DY-677, DY-678, respectively), were incubated with plasma proteins dissolved in phosphate-buffered saline. Protein binding was assessed by absorption spectroscopy, gel electrophoresis, ultrafiltration, and dialysis. Distribution of dye in organs was studied by intraveneous injection of 62 nmol dye/kg body weight into mice (n = 12; up to 180 minutes postinjection) using whole-body near-infrared fluorescence imaging. Spectroscopic studies, gel electrophoresis, and dialysis demonstrated reduced protein binding with increasing number of sulfonate groups. The bovine serum albumin binding constant of the most hydrophobic dye, DY-675, is 18 times higher than that of the most hydrophilic fluorophore, DY-678. In vivo biodistribution analysis underlined a considerable influence of dye hydrophilicity on biodistribution and excretion pathways, with the more hydrophobic dyes, DY-675 and DY-676, accumulating in the liver, followed by strong fluorescence signals in bile and gut owing to accumulation in feces and comparatively hydrophilic DY-678-COOH accumulating in the bladder. Our results demonstrate the possibility of selectively controlling dye-protein interactions and, thus, biodistribution and excretion pathways via proper choice of the fluorophore's substitution pattern. This underlines the importance of structure-property relationships for fluorescent labels. Moreover, our data could provide the basis for the rationalization of future contrast agent developments. PY - 2011 DO - https://doi.org/10.2310/7290.2011.00005 SN - 1535-3508 SN - 1536-0121 VL - 10 IS - 4 SP - 258 EP - 269 PB - Decker CY - Hamilton, Ont. AN - OPUS4-24311 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Würth, Christian A1 - Grabolle, Markus A1 - Pauli, Jutta A1 - Spieles, Monika A1 - Resch-Genger, Ute T1 - Comparison of methods and achievable uncertainties for the relative and absolute measurement of photoluminescence quantum yields N2 - The photoluminescence quantum yield (Φf) that presents a direct measure for the efficiency of the conversion of absorbed photons into emitted photons is one of the spectroscopic key parameters of functional fluorophores. It determines the suitability of such materials for applications in, for example, (bio)analysis, biosensing, and fluorescence imaging as well as as active components in optical devices. The reborn interest in accurate Φf measurements in conjunction with the controversial reliability of reported Φf values of many common organic dyes encouraged us to compare two relative and one absolute fluorometric method for the determination of the fluorescence quantum yields of quinine sulfate dihydrate, coumarin 153, fluorescein, rhodamine 6G, and rhodamine 101. The relative methods include the use of a chain of Φf transfer standards consisting of several 'standard dye' versus 'reference dye' pairs linked to a golden Φf standard that covers the ultraviolet and visible spectral region, and the use of different excitation wavelengths for standard and sample, respectively. Based upon these measurements and the calibration of the instruments employed, complete uncertainty budgets for the resulting Φf values are derived for each method, thereby providing evaluated standard operation procedures for Φf measurements and, simultaneously, a set of assessed Φf standards. KW - Fluorescence KW - Photoluminescence KW - Quantum yield KW - Dye KW - Uncertainty KW - Absolute quantum yield KW - Method comparison KW - Integrating sphere PY - 2011 DO - https://doi.org/10.1021/ac2000303 SN - 0003-2700 SN - 1520-6882 VL - 83 IS - 9 SP - 3431 EP - 3439 PB - American Chemical Society CY - Washington, DC AN - OPUS4-23632 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CHAP A1 - Resch-Genger, Ute A1 - Hoffmann, Katrin A1 - Pauli, Jutta ED - Brahme, A. T1 - Signal-relevant properties of fluorescent labels and optical probes and their determination N2 - Luminescence techniques are among the most populär analytical and detection tools in the life Sciences (Das et al., 2012; Kobayashi et al., 2010; Lakowicz, 2006; Weissleder and Pittet, 2008). The ever-growing interest in these methods that yield fluorophore-specific quantities such as emission and excitation spectra, fluorescence quantum yields, fluorescence lifetimes, and emission anisotropies is due to their comparable ease of use; noninvasive character; potential for combining spectrally, temporally, and spatially resolved ineasurements; and suitability for multiplexing and remote sensing (Resch-Genger et al., 2005a). Moreover, fluorescence detection techniques can provide sensitivity down to the single-molecule level. As the vast majority of analytes or targets of interest are nonfluorescent and most endogenous chromophores typically display rather low fluorescence quantum yields, the tremendous analytical potential of photoluminescence techniques initiated also the development of an ever-growing number of fluorescent labels and probes as readily available tools for a broad variety of analytes and applications and the labeling of biomolecules such as oligonucleotides, antibodies, or peptides as detailed in the chapter "Fluorescent Reporters and Optical Probes: Dye Conjugation Chemistry, Spectroscopic Properties, and Design Concepts" (Berezin and Achilefu, 2010; Escobedo et al., 2010; Luo et al., 2011; Resch-Genger and Licha, 2011; Resch-Genger et al., 2008). Prominent examples of such dye-biomolecule conjugates are fluorophore-labeled secondary antibodies, for example, for immunohistochemistry or flow cytometry, and conventional contrast agents, consisting of a fluorescent reporter and a biomarker-specific biomolecule like a peptide, antibody, or antibody fragment for in vivo near-infrared (NIR) fluorescence imaging of pathological changes in the spectral window of 650-950 nm. These contrast agents are often referred to as targeted optical probes. In addition, more sophisticated Systems are increasingly emerging, the optical properties of which can be modulated selectively by Chemical or biological inputs (Elias et al., 2008; Kobayashi et al., 2011; Resch-Genger and Licha, 2011). PY - 2014 SN - 978-0-444-53632-7 DO - https://doi.org/10.1016//B978-0-444-53632-7.00408-1 VL - 4 SP - Chapter 4.02, 15 EP - 26 PB - Elsevier CY - Amsterdam AN - OPUS4-31433 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Pauli, Jutta A1 - Vag, T. A1 - Haag, R. A1 - Spieles, Monika A1 - Wenzel, M. A1 - Kaiser, W.A. A1 - Resch-Genger, Ute A1 - Hilger, I. T1 - An in vitro characterization study of new near infrared dyes for molecular imaging N2 - The spectroscopic properties, stability, and cytotoxicity of series of cyanine labels, the dyes DY-681, DY-731, DY-751, and DY-776, were studied to identify new tools for in vivo fluorescence imaging and to find substitutes for DY-676 recently used by us as fluorescent label in a target-specific probe directed against carcinoembryonic antigen (CEA). This probe enables the selective monitoring of CEA-expressing tumor cells in mice, yet displays only a low fluorescence quantum yield and thus, a non-optimum sensitivity. All the DY dyes revealed enhanced fluorescence quantum yields, a superior stability, and a lower cytotoxicity in comparison to clinically approved indocyanine green (ICG). With DY-681 and far-red excitable DY-731 and DY-751, we identified three dyes with improved properties compared to DY-676 and ICG. KW - In vivo fluorescence imaging KW - NIR fluorophore KW - Cytotoxicity KW - Stability KW - Fluorescence quantum yield KW - Cyanine PY - 2009 DO - https://doi.org/10.1016/j.ejmech.2009.01.019 SN - 0009-4374 SN - 0223-5234 VL - 44 IS - 9 SP - 3496 EP - 3503 PB - EDIFOR CY - Paris AN - OPUS4-19712 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hatami, Soheil A1 - Würth, Christian A1 - Kaiser, Martin A1 - Leubner, S. A1 - Gabriel, S. A1 - Bahrig, L. A1 - Lesnyak, V. A1 - Pauli, Jutta A1 - Gaponik, N. A1 - Eychmüller, A. A1 - Resch-Genger, Ute T1 - Absolute photoluminescence quantum yields of IR26 and IR-emissive Cd1-xHgxTe and PbS quantum dots - method- and material-inherent challenges N2 - Bright emitters with photoluminescence in the spectral region of 800–1600 nm are increasingly important as optical reporters for molecular imaging, sensing, and telecommunication and as active components in electrooptical and photovoltaic devices. Their rational design is directly linked to suitable methods for the characterization of their signal-relevant properties, especially their photoluminescence quantum yield (Φf). Aiming at the development of bright semiconductor nanocrystals with emission >1000 nm, we designed a new NIR/IR integrating sphere setup for the wavelength region of 600–1600 nm. We assessed the performance of this setup by acquiring the corrected emission spectra and Φf of the organic dyes Itrybe, IR140, and IR26 and several infrared (IR)-emissive Cd1-xHgxTe and PbS semiconductor nanocrystals and comparing them to data obtained with two independently calibrated fluorescence instruments absolutely or relative to previously evaluated reference dyes. Our results highlight special challenges of photoluminescence studies in the IR ranging from solvent absorption to the lack of spectral and intensity standards together with quantum dot-specific challenges like photobrightening and photodarkening and the size-dependent air stability and photostability of differently sized oleate-capped PbS colloids. These effects can be representative of lead chalcogenides. Moreover, we redetermined the Φf of IR26, the most frequently used IR reference dye, to 1.1 × 10-3 in 1,2-dichloroethane DCE with a thorough sample reabsorption and solvent absorption correction. Our results indicate the need for a critical reevaluation of Φf values of IR-emissive nanomaterials and offer guidelines for improved Φf measurements. PY - 2015 DO - https://doi.org/10.1039/c4nr04608k SN - 2040-3364 SN - 2040-3372 VL - 7 IS - 1 SP - 133 EP - 143 PB - RSC Publ. CY - Cambridge AN - OPUS4-32408 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauli, Jutta T1 - Suitable Labels for Molecular Imaging - Influence of Dye Hydrophilicity on the Spectroscopic Properties of lgG Conjugates T2 - 23rd Lecture Conference on Photochemistry CY - Potsdam, Germany DA - 2012-10-08 PY - 2012 AN - OPUS4-26967 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -