TY - CONF A1 - Rurack, Knut T1 - Advanced Onsite Analysis for Point-of-Need Applications: Innovations for Robust, Reliable, and User-Friendly Detection N2 - The advancement of portable analytical assays has transformed onsite analysis in several areas, including food safety, environmental monitoring and forensics. The SARS-CoV-2 pandemic has fueled a need for rapid, onsite solutions that enable immediate decision making without the need for and use of laboratory infrastructure. The integration of mobile devices with advanced cameras and significant computing power improves the accessibility and usability of these tests. However, many current methods are limited to the detection of single parameters. The next challenge is to develop robust multiplexed assays that can analyze multiple parameters simultaneously with high sensitivity. In this lecture, innovative approaches developed at BAM will be presented with a focus on supramolecular chemistry, luminescence detection, nanomaterials and miniaturization of devices. Examples will include mesoporous nanomaterials, gated indicator systems, imprinted polymers, microfluidic devices, test strips and smartphone-based analytical tools, focusing on two use cases, i.e., the detection of contaminants in surface waters and immunoanalytical explosives detection. T2 - International Conference on Emergin Trends in Materials Chemistry CY - Coimbatore, India DA - 03.04.2025 KW - Onsite analysis KW - Rapid tests KW - Mobile devices KW - Supramolecular chemistry KW - Fluorescence PY - 2025 AN - OPUS4-65434 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Rurack, Knut T1 - Functional polymeric coatings for sensory applications N2 - The growing demand for the detection of relevant chemical compounds as close as possible to their point of origin—whether in industrial processes, for (civilian or military) security, or for environmental monitoring—has increased the importance of functional polymers with molecular recognition capabilities. These materials must meet practical requirements arising from very different real-world scenarios in which simple, robust, and field-deployable approaches are needed and in which bioanalytical binders often suffer significant performance losses. Polymer recognition matrices therefore serve as an essential complement to established laboratory-based analytical technologies. The realization of rapid and reliable onsite detection places specific demands on material design: polymeric recognition layers must be produced with minimal thickness, integrated onto suitable carrier media, and designed for both selectivity and operational robustness. This presentation will introduce our work on molecularly imprinted polymers (MIPs) that have been specifically developed for the detection of relevant contaminants such as pesticides and perfluorinated compounds. Beyond these target analytes, the presentation will show how such polymer layers can support robust, sustainable diagnostic concepts, and it will outline generalizable design principles that enable their extension to a broad spectrum of analytical challenges. T2 - Institutskolloquium des Instituts für Chemie, Humboldt Universität zu Berlin CY - Berlin, Germany DA - 28.01.2026 KW - Functional organic materials KW - Responsive polymers KW - Sensing KW - Molecularly imprinted polymers PY - 2026 AN - OPUS4-65435 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Prakash, Swayam A1 - Bell, Jérémy A1 - Rurack, Knut T1 - Rapid Onsite Detection of Fecal Contamination in Water Using a Portable Fluorometric Assay N2 - Fecal pollution in water poses significant health risks, especially when contaminated sources are used for drinking and food production. Traditional water quality testing methods are expensive, slow, and require skilled personnel, limiting their accessibility. This work addresses these issues by developing a portable fluorometric assay for the detection of the fecal indicator pigment urobilin (UB). The assay uses silane-functionalized glass fiber strips impregnated with zinc chloride, providing a ‘drop-&-detect’ approach with enhanced fluorescence response mediated by the unique complexation properties of ZnCl2 and UB. This approach allows for the detection of UB at sub-nanomolar concentrations in less than 1 min using a 3D-printed setup with miniaturized optical components powered by a smartphone with its camera as a detector. The results validated with a benchtop fluorometer show the effectiveness of this method. The successful application of this userfriendly, rapid, and sensitive assay to real water samples from three rivers and the influx and efflux of a wastewater treatment plant advances field-based water quality monitoring, meets the WHO’s ASSURED criteria, and supports progress toward the global clean water and sanitation goals. KW - Fecal pigment KW - Fluorescence KW - Signal amplification KW - Surface chemistry KW - Water quality testing PY - 2026 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-655543 DO - https://doi.org/10.1021/acssensors.5c03922 SN - 2379-3694 VL - 11 SP - 1 EP - 9 PB - American Chemical Society CY - Washington, D.C. AN - OPUS4-65554 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hernández-García, María Amparo A1 - Rurack, Knut A1 - Bell, Jérémy T1 - Rapid fabrication of optical elements for sensing applications using a standard SLA printer N2 - The demand for compact, high-performance optical components has driven the development of increasingly sophisticated and miniaturized optical elements, often requiring complex and costly fabrication methods. In this study, we propose a cost-effective and accessible methodology for the fabrication of lenses and free-form optics using a commercially available stereolithography (SLA) 3D printer. A systematic characterisation of six transparent photopolymer resins was conducted in terms of their spectroscopic, optical, and morphological properties, i.e., surface and dimensional properties. The evaluation encompassed parameters such as transmittance, autofluorescence, refractive index, and surface roughness. A straightforward yet resilient printing and post-treatment protocol was formulated, facilitating the fabrication of optical components with over 80% transmittance, minimal intrinsic fluorescence, and surface quality that is compatible with exacting optical applications. The fabricated components demonstrated excellent dimensional fidelity to digital designs and high reproducibility. To demonstrate the versatility of this approach, aspherical, miniaturized, and freeform lenses were designed and integrated into three fluorogenic sensing systems, including oil (strip-based) and chlorine (microfluidic-based) detection platforms, as well as a smartphone-based SARS-CoV-2 biosensor. The integration of customized 3D-printed optics has been demonstrated to enhance signal collection and readout performance, thereby highlighting the potential of this approach to democratize the rapid prototyping and deployment of miniaturized optical systems. This work represents a significant advancement in the field of additive manufacturing, particularly in relation to the development of functional photonic devices. Furthermore, it opens new prospects for sensor applications in biosensing, microfluidics, imaging, and integrated optics. KW - 3D-printing KW - Free-form KW - Prototyping KW - Optical resin KW - Surface finishing KW - Fluorescence KW - Sensor PY - 2026 DO - https://doi.org/10.37188/lam.2026.024 VL - 7 SP - 1 EP - 19 PB - Light Publishing Group CY - Changchun AN - OPUS4-65555 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Descalzo, Ana B. A1 - Ashokkumar, Pichandi A1 - Shen, Z. A1 - Rurack, Knut T1 - On the Aggregation Behaviour and Spectroscopic Properties of Alkylated and Annelated BoronDipyrromethene (BODIPY) Dyes in Aqueous Solution N2 - The tendency of boron-dipyrromethene (BODIPY) dyes to associate in water is well known, and usually a cause for inferior fluorescence properties. Synthetic efforts to chemically improve BODIPYs’ water solubility and minimize this problem have been numerous in the past. However, a deeper understanding of the phenomena responsible for fluorescence quenching is still required. Commonly, the spectroscopic behaviour in aqueous media has been attributed to aggregate or excimer formation, with such works often centring on a single BODIPY family. Herein, we provide an integrating discussion including very diverse types of BODIPY dyes. Our studies revealed that even subtle structural changes can distinctly affect the association behaviour of the fluorophores in water, involving different photophysical processes. The palette of behaviour found ranges from unperturbed emission, to the formation of H or J aggregates and excimers, to the involvement of tightly bound, preformed excimers. These results are a first step to a more generalized understanding of spectroscopic properties vs. structure, facilitating future molecular design of BODIPYs, especially as probes for biological applications. KW - Aggregates KW - BODIPY KW - Excimers KW - Fluorescence KW - Photophysics PY - 2019 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-497771 DO - https://doi.org/10.1002/cptc.201900235 SN - 2367-0932 VL - 4 IS - 2 SP - 120 EP - 131 PB - WILEY-VCH CY - Weinheim AN - OPUS4-49777 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Liu, H. A1 - Song, W. A1 - Gröninger, Delia A1 - Zhang, L. A1 - Lu, Y. A1 - Chan, K. S. A1 - Zhou, Z. A1 - Rurack, Knut A1 - Shen, Z. T1 - Real-time monitoring of newly acidified organelles during autophagy enabled by reaction-based BODIPY dyes N2 - Real-time monitoring of newly acidified organelles during autophagy in living cells is highly desirable for a better understanding of intracellular degradative processes. Herein, we describe a reaction-based boron dipyrromethene (BODIPY) dye containing strongly electron-withdrawing diethyl 2-cyanoacrylate groups at the α-positions. The probe exhibits intense red fluorescence in acidic organelles or the acidified cytosol while negligible fluorescence in other regions of the cell. The underlying mechanism is a nucleophilic reaction at the central meso-carbon of the indacene core, resulting in the loss of π-conjugation entailed by dramatic spectroscopic changes of more than 200 nm between its colorless, non-fluorescent leuco-BODIPY form and its red and brightly emitting form. The reversible transformation between red fluorescent BODIPY and leuco-BODIPY along with negligible cytotoxicity qualifies such dyes for rapid and direct intracellular lysosome imaging and cytosolic acidosis detection simultaneously without any washing step, enabling the real-time monitoring of newly acidified organelles during autophagy. KW - Autophagy KW - BODIPY KW - Fluorescence KW - Lysosome KW - Real-time imaging PY - 2019 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-498358 UR - https://www.nature.com/articles/s42003-019-0682-1 DO - https://doi.org/10.1038/s42003-019-0682-1 SN - 23993642 VL - 2 SP - 442 PB - Nature Research CY - London AN - OPUS4-49835 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Gojani, Ardian A1 - Tobias, Charlie A1 - Hülagü, Deniz A1 - Rurack, Knut A1 - Hodoroaba, Vasile-Dan T1 - Toward determination of the surface roughness of particles from a SEM image N2 - In this communication, we address the issue of roughness measurement by investigating if the grayscale values from SEM images can be used for surface roughness determination of spherical particles. KW - MamaLoCA KW - Core-shell particles KW - Electron microscopy KW - Image processing KW - Particle characterisation KW - Roughness PY - 2021 DO - https://doi.org/10.1017/S1431927621011375 SN - 1431-9276 SN - 1435-8115 VL - 27 IS - Suplement S1 SP - 3302 EP - 3305 PB - Cambridge University Press CY - New York, NY AN - OPUS4-53283 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hülagü, Deniz A1 - Tobias, Charlie A1 - Dao, Radek A1 - Komarov, Pavel A1 - Rurack, Knut A1 - Hodoroaba, Vasile-Dan T1 - Towards 3D determination of the surface roughness of core–shell microparticles as a routine quality control procedure by scanning electron microscopy N2 - AbstractRecently, we have developed an algorithm to quantitatively evaluate the roughness of spherical microparticles using scanning electron microscopy (SEM) images. The algorithm calculates the root-mean-squared profile roughness (RMS-RQ) of a single particle by analyzing the particle’s boundary. The information extracted from a single SEM image yields however only two-dimensional (2D) profile roughness data from the horizontal plane of a particle. The present study offers a practical procedure and the necessary software tools to gain quasi three-dimensional (3D) information from 2D particle contours recorded at different particle inclinations by tilting the sample (stage). This new approach was tested on a set of polystyrene core-iron oxide shell-silica shell particles as few micrometer-sized beads with different (tailored) surface roughness, providing the proof of principle that validates the applicability of the proposed method. SEM images of these particles were analyzed by the latest version of the developed algorithm, which allows to determine the analysis of particles in terms of roughness both within a batch and across the batches as a routine quality control procedure. A separate set of particles has been analyzed by atomic force microscopy (AFM) as a powerful complementary surface analysis technique integrated into SEM, and the roughness results have been compared. KW - Core–shell particles KW - Image analysis KW - Roughness KW - Scanning electron microscopy KW - Atomic force microscopy KW - Tilting KW - Batch analysis PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-607590 DO - https://doi.org/10.1038/s41598-024-68797-7 SN - 2045-2322 VL - 14 IS - 1 SP - 1 EP - 13 PB - Springer Science and Business Media LLC AN - OPUS4-60759 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Sarma, Dominik A1 - Mielke, Johannes A1 - Sahre, Mario A1 - Beck, Uwe A1 - Hodoroaba, Vasile-Dan A1 - Rurack, Knut T1 - TSEM-based contour analysis as a tool for the quantification of the profile roughness of silica shells on polystyrene core particles N2 - Core-shell (CS) particles with a polymeric core and a silica shell play an important role in the materials and (bio)analytical sciences. Besides the establishment of reliable synthesis procedures, comprehensive particle characterization is essential for batch-to-batch reproducibility and objective performance assessment across architectures, protocols, and laboratories. Particle characterization with respect to size, size distribution, shell thickness and texture, surface area and roughness or materials composition is commonly conducted with different analytical methods, often on different samples. Our approach uses a dual-mode TSEM/SEM set-up with an EDX detector to obtain a complementary data set with sufficient statistical confidence of one and the same sample on a single instrument. Our protocol reveals information about size, size distribution and shell thickness of the various particles employed from overview images, while an increased field of view (FOV) and high-resolution EDX analysis yields detailed information on shell texture and elemental composition. An image analysis tool was developed to derive and quantify the profile roughness of CS particles from individual beads. Comparison with surface roughness data from AFM showed a similar trend in roughness across the series of particles. Reliable classification into smooth and rough is proposed and roughness changes within different particle batches were tracked systematically. KW - Core-shell particles KW - Electron microscopy KW - Transmission mode KW - Roughness KW - Image analysis PY - 2017 DO - https://doi.org/10.1016/j.apsusc.2017.07.099 SN - 0169-4332 SN - 1873-5584 VL - 426 IS - 1 SP - 446 EP - 455 PB - Elsevier B.V. CY - Amsterdam AN - OPUS4-42256 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hülagü, Deniz A1 - Tobias, Charlie A1 - Gojani, Ardian B. A1 - Rurack, Knut A1 - Hodoroaba, Vasile-Dan T1 - Towards automated scanning electron microscopy image analysis of core-shell microparticles for quasi-3D determination of the surface roughness N2 - Core-shell (CS) particles have been increasingly used for a wide range of applications due to their unique properties by merging individual characteristics of the core and the shell materials. The functionality of the designed particles is strongly influenced by their surface roughness. Quantitative evaluation of the roughness of CS microparticles is, however, a challenging task for Scanning Electron Microscopy (SEM). The SEM images contain two-dimensional (2D) information providing contour roughness data only from the projection of the particle in the horizontal plane. This study presents a practical procedure to achieve more information by tilting the sample holder, hence allowing images of different areas of a single particle to be recorded at different orientations under the same view angle. From the analysis of these images, quasi three-dimensional (3D) information is obtained. Three types of home-made particles were investigated: i) bare polystyrene (PS) particles, ii) PS particles decorated with a first magnetic iron oxide (Fe3O4) nanoparticle shell forming CS microbeads, iii) PS/Fe3O4 particles closed with a second silica (SiO2) shell forming core-shell-shell (CSS) microbeads. A series images of a single particle were taken with stepwise tilted sample holder up to 10° by an SEM with high-resolution and surface sensitive SE-InLens® mode. A reliable analysis tool has been developed by a script in Python to analyze SEM images automatically and to evaluate profile roughness quantitatively, for individual core-shell microparticles. Image analysis consists of segmentation of the images, identifying contour and the centre of the particle, and extracting the root mean squared roughness value (RMS-RQ) of the contour profile from the particle projection within a few seconds. The variation in roughness from batch-to-batch was determined with the purpose to set the method as a routine quality check procedure. Flow cytometry measurements provided complementary data. Measurement uncertainties associated to various particle orientations were also estimated. T2 - ICASS 5th International Conference on Applied Surface Science CY - Palma, Mallorca, Spain DA - 25.04.2022 KW - Core-shell particles KW - Image analysis KW - Roughness KW - Scanning electron microscopy PY - 2022 AN - OPUS4-54774 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -