TY - CONF A1 - Hoffmann, Katrin T1 - Characterization of highly fluorescence candidate glass references standards T2 - 12th Conference on Methods and Applicaions of Fluorescence: Spectroscopy, Imaging and Probes (MAF-12) CY - Strasbourg, France DA - 2011-09-11 PY - 2011 AN - OPUS4-24522 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Hoffmann, Katrin A1 - Resch-Genger, Ute A1 - Nitschke, R. ED - O.S. Wolfbeis, ED - Resch-Genger, Ute T1 - Comparability of fluorescence microscopy data and need for instrument characterization of spectral scanning microscopes N2 - The aim of this article is to illustrate the need for an improved quality assurance in fluorescence microscopy. From the instrument-side, this can be achieved by a better understanding, consideration, and regular control of the instrument-specific parameters and quantities affecting measured fluorescence signals. Particularly, the need for requirements on physical- and chemical-type instrument standards for the characterization and performance validation of spectral fluorescence microscopes (SFMs) is discussed and suitable systems are presented. Special emphasis is given to spectral fluorescence standards and to day-to-day intensity standards for SFMs. Fluorescence standards and well-characterized fluorescence microscopes are the first and essential steps towards the comparability and the understanding of the variability in fluorescence microscopy data in medical and life sciences. In addition, standards enable the distinction between instrument-specific variations and fluorescent label- or probe-related uncertainties as well as generally sample-related effects. KW - Fluorescence spectroscopy KW - Fluorescence microscopy KW - Quality assurance KW - Calibration KW - Standard KW - Comparability KW - Quantification PY - 2008 SN - 978-3-540-70570-3 DO - https://doi.org/10.1007/4243_2008_028 SN - 1617-1306 N1 - Serientitel: Springer Series on Fluorescence – Series title: Springer Series on Fluorescence VL - 6 IS - Part A SP - 89 EP - 116 PB - Springer CY - Berlin, Heidelberg AN - OPUS4-18995 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hoffmann, Katrin T1 - New NIR fluorescence reference materials and quantum yield standards for standardization of fluorescence-based measurements N2 - Luminescence techniques are amongst the most commonly used analytical methods in the life and the material sciences due to their sensitivity and nondestructive character. All photoluminescence signals are, however, affected by wavelength-, polarization- and time-dependent instrument-related effects. Furthermore, substantial challenges to measure absolute luminescence intensities complicate the comparison of data recorded with different instruments and on the same instrument at different times. These problems can be easily resolved with fluorescence standards used for instrument performance validation (IPV) and determination of instrument-to-instrument variations, which allow to measure, quantify, and monitor the wavelength-dependent spectral responsivity for typically used instrument settings. For example, a set of liquid fluorescence standards, the BAM Kit F001-F005, and a ready-to-use glass-based fluorescence standard BAM F-012 developed and certified by BAM enable the characterization of many fluorescence parameters in the UV/vis wavelength range. For the increasingly used near infrared (NIR) region, standards and calibration tools are still very rare. Reliable spectral fluorescence standards and intensity or quantum yield standards are currently not available for the NIR, even though in biology, molecular imaging, and clinical diagnostics fluorescence labels absorbing and emitting in the long wavelength region beyond 650 nm are being increasingly used. This limitation hampers the reliability and comparability of fluorescence measurements in the NIR and calls for simple fluorescence standards for instrument characterization and for the quantification of fluorescence intensities and efficiencies to improve the comparability of the emission measurements in the NIR. This encouraged us to assess the potential of several NIR-emitting materials as spectral fluorescence standards, thereby extending the BAM Kit from the UV/vis into the NIR up to 950 nm. Moreover, we currently certify quantum yield standards for the UV/vis/NIR to improve the reliability of relative measurements of this spectroscopic key quantity particularly > 650 nm. These tools enable an instrument characterization, signal referencing, quality assurance, traceability, and method validation now also for wavelengths > 650 nm, thereby improving the reliability of fluorescence data in pharmaceutical research, medical and clinical diagnostics, material analysis, and environmental monitoring. T2 - 15th Conference on Methods and Applications in Fluorescence (MAF) CY - Brugge, Belgium DA - 10.09.2017 KW - Fluorescence reference materials KW - Quantum yield standard KW - Glass-based fluorescence standard PY - 2017 AN - OPUS4-41990 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hoffmann, Katrin T1 - Reference standards for the performance validation of fluorescence measurement systems T2 - 11th International Conference on Methods and Applications of Fluorescence: Spectroscopy, Imaging and Probes CY - Budapest, Hungary DA - 2009-09-06 PY - 2009 AN - OPUS4-20424 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hoffmann, A. A1 - Lischeid, G. A1 - Koch, Matthias A1 - Lentzsch, P. A1 - Sommerfeld, Thomas A1 - Müller, M.H. T1 - Co-Cultivation of Fusarium, Alternaria, and Pseudomonas on Wheat-Ears Affects Microbial Growth and Mycotoxin Production N2 - Mycotoxigenic fungal pathogens Fusarium and Alternaria are a leading cause of loss in cereal production. On wheat-ears, they are confronted by bacterial antagonists such as pseudomonads. Studies on these groups’ interactions often neglect the infection process’s temporal aspects and the associated priority effects. In the present study, the focus was on how the first colonizer affects the subsequent ones. In a climate chamber experiment, wheat-ears were successively inoculated with two different strains (Alternaria enuissima At625, Fusarium graminearum Fg23, or Pseudomonas simiae Ps9). Over three weeks, microbial abundances and mycotoxin concentrations were analyzed and visualized via Self Organizing Maps with Sammon Mapping (SOM-SM). All three strains revealed different characteristics and strategies to deal with co-inoculation: Fg23, as the first colonizer, suppressed the establishment of At625 and Ps9. Nevertheless, primary inoculation of At625 reduced all of the Fusarium toxins and stopped Ps9 from establishing. Ps9 showed priority effects in delaying and blocking the production of the fungal mycotoxins. The SOM-SM analysis visualized the competitive strengths: Fg23 ranked first, At625 second, Ps9 third. Our findings of species-specific priority effects in a natural environment and the role of the mycotoxins involved are relevant for developing biocontrol strategies. KW - Antagonists KW - Microbe interactions KW - Mycotoxins KW - Priority effect KW - SOM-SM PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-521554 DO - https://doi.org/10.3390/microorganisms9020443 VL - 9 IS - 2 SP - 443 PB - MDPI AN - OPUS4-52155 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Behnke, Thomas A1 - Würth, Christian A1 - Hoffmann, Katrin A1 - Hübner, Martin A1 - Panne, Ulrich A1 - Resch-Genger, Ute T1 - Encapsulation of hydrophobic dyes in polystyrene micro- and nanoparticles via swelling procedures N2 - Aiming at the derivation of a generalized procedure for the straightforward preparation of particles fluorescing in the visible and near-infrared (NIR) spectral region, different swelling procedures for the loading of the hydrophobic polarity-probe Nile Red into nano- and micrometer sized polystyrene particles were studied and compared with respect to the optical properties of the resulting particles. The effect of the amount of incorporated dye on the spectroscopic properties of the particles was investigated for differently sized beads with different surface chemistries, i.e., non-functionalized, aminomodified and PEG-grafted surfaces. Moreover, photostability and leaking studies were performed. The main criterion for the optimization of the dye loading procedures was a high and thermally and photochemically stable fluorescence output of the particles for the future application of these systems as fluorescent labels. KW - Fluorescence KW - Nile red KW - Polystyrene KW - Nanoparticles KW - Microparticles KW - Encapsulation KW - Swelling PY - 2011 DO - https://doi.org/10.1007/s10895-010-0632-2 SN - 1053-0509 SN - 1573-4994 VL - 21 IS - 3 SP - 937 EP - 944 PB - Plenum Publ. Corp. CY - New York, NY AN - OPUS4-22692 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Noble, J.E. A1 - Wang, L. A1 - Cerasoli, E. A1 - Knight, A.E. A1 - Porter, R.A. A1 - Gray, E. A1 - Howe, C. A1 - Hannes, E. A1 - Corbisier, P. A1 - Wang, J. A1 - Wu, L. A1 - Altieri, I. A1 - Patriarca, M. A1 - Hoffmann, Angelika A1 - Resch-Genger, Ute A1 - Ebert, B. A1 - Voigt, Jan A1 - Shigeri, Y. A1 - Vonsky, M.S. A1 - Konopelko, L.A. A1 - Gaigalas, A.K. A1 - Bailey, M. J. A. T1 - An international comparability study to determine the sources of uncertainty associated with a non-competitive sandwich fluorescent ELISA KW - ELISA KW - Fluorescence KW - Interferon KW - Uncertainty KW - Round Robin KW - Immunoassay KW - Quality assurance KW - Fluorescein PY - 2008 SN - 1434-6621 SN - 1437-8523 VL - 46 IS - 7 SP - 1033 EP - 1045 PB - De Gruyter CY - Berlin AN - OPUS4-18283 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Würth, Christian A1 - Hoffmann, Katrin A1 - Behnke, Thomas A1 - Ohnesorge, Marius A1 - Resch-Genger, Ute T1 - Polymer- and glass-based fluorescence standards for the near infrared (NIR) spectral region N2 - The widespread use and acceptance of fluorescence techniques especially in regulated areas like medical diagnostics is closely linked to standardization concepts that guarantee and improve the comparability and reliability of fluorescence measurements. At the core of such concepts are dependable fluorescence standards that are preferably certified. The ever rising interest in fluorescence measurements in the near-infrared (NIR) spectral region renders the availability of spectral and intensity standards for this wavelength region increasingly important. This encouraged us to develop approaches to solid NIR standards based upon dye-doped polymers and assess their applicationrelevant properties in comparison to metal ion-doped glasses. The overall goal is here to provide inexpensive, easily fabricated, and robust internal and external calibration tools for a broad variety of fluorescence instruments ranging e.g. from spectrofluorometers over fluorescence microscopes to miniaturized fluorescence sensors. KW - Fluorescence standard KW - PMMA KW - Photostability KW - Perylene KW - Rhodamine 800 KW - Dye-doped polymers KW - Glass KW - Laser dye PY - 2011 DO - https://doi.org/10.1007/s10895-010-0650-0 SN - 1053-0509 SN - 1573-4994 VL - 21 IS - 3 SP - 953 EP - 961 PB - Plenum Publ. Corp. CY - New York, NY AN - OPUS4-22184 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Xu, R. A1 - Teich, W. A1 - Frenzel, Florian A1 - Hoffmann, Katrin A1 - Radke, J. A1 - Rösler, J. A1 - Faust, K. A1 - Blank, A. A1 - Brandenburg, S. A1 - Misch, M. A1 - Vajkoczy, P. A1 - Onken, J. S. A1 - Resch-Genger, Ute T1 - Optical characterization of sodium fluorescein in vitro and ex vivo N2 - Objective: The utilization of fluorescein-guided biopsies and resection has been recently discussed as a suitable strategy to improve and expedite operative techniques for the resection of central nervous system (CNS) tumors. However, little is known about the optical properties of sodium fluorescein (NaFl) in human tumor tissue and their potential impact on ex vivo analyses involving fluorescence-based methods. Methods: Tumor tissue was obtained from a study cohort of an observational study on the utilization of fluorescein-guided biopsy and resection (n=5). The optical properties of fluorescein-stained tissue were compared to the optical features of the dye in vitro and in control samples consisting of tumor tissue of high-grade glioma patients (n=3) without intravenous (i.v.) application of NaFl. The dye-exposed tumor tissues were used for optical measurements to confirm the detectability of NaFl emission ex vivo. The tissue samples were fixed in 4%PFA, immersed in 30% sucrose, embedded in Tissue-Tek OCT compound, and cut to 10 mm cryosections. Spatially resolved emission spectra from tumor samples were recorded on representative slides with a Confocal Laser Scanning Microscope FV1000 (Olympus GmbH, Hamburg, Germany) upon excitation with lexc = 488 nm. Results: Optical measurements of fluorescein in 0.9% sodium chloride (NaCl) under in vitro conditions showed an absorption maximum of lmax abs = 479 nm as detected with spectrophotometer Specord 200 and an emission peak at lmax em = 538 nm recorded with the emCCD detection system of a custom-made microscope-based single particle setup using a 500 nm long-pass filter. Further measurements revealed pH- and concentration-dependent emission spectra of NaFl. Under ex vivo conditions, confocal laser scanning microscopy of fluorescein tumor samples revealed a slight bathochromic shift and a broadening of the emission band. Conclusion: Tumor uptake of NaFl leads to changes in the optical properties – a bathochromic shift and broadening of the emission band – possibly caused by the dye’s high pH sensitivity and concentration-dependent reabsorption acting as an innerfilter of the dye’s emission, particularly in the short wavelength region of the Emission spectrum where absorption and fluorescence overlap. Understanding the ex vivo optical properties of fluorescein is crucial for testing and validating its further applicability as an optical probe for intravital microscopy, immunofluorescence localization studies, and flow cytometry analysis. KW - Fluorescence KW - Optical probe KW - Sensor KW - Fluorescein KW - PH KW - Imaging KW - Tissue KW - Cancer KW - Medical diagnostics KW - Tumor KW - In vivo KW - Ex vivo KW - Quantum yield KW - Dye KW - Quality assurance KW - Microscopy PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-527843 DO - https://doi.org/10.3389/fonc.2021.654300 SN - 2234-943X VL - 11 SP - 1 EP - 8 PB - Frontiers Media CY - Lausanne AN - OPUS4-52784 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Friedrich, Jörg Florian A1 - Kühn, Gerhard A1 - Mix, Renate A1 - Hoffmann, Katrin A1 - Resch-Genger, Ute T1 - Tailoring of polymer surfaces with monotype functional groups of variable density using chemical and plasma chemical processes N2 - Polymer surfaces were modified in low-pressure glow discharge plasmas for introduction of monotype functional groups of different type and density. For this purpose three ways are selected, (i) oxygen plasma treatment followed by wet-chemical reduction of O functional groups to OH groups, (ii) plasma bromination for introducing C - Br groups and (iii) coating by deposition of thin plasma (co-) polymerized layers of functional groups-bearing monomers with OH, NH2, COOH, epoxy etc. functionalities. Subsequently, these groups were used as anchoring points for chemical grafting of spacer molecules, oligomers, prepolymers, fluorescent labels, ionic and nucleic acid residues, employing different chemical routes. The yield in monosort functional groups at polymer surfaces ranged from 10–14 (process i), 20–40 (process ii) and 18–31 groups per 100 C atoms (process iii) as measured by XPS after derivatization. The consumption of functional groups amounted to 40–90% of all functionalities present at the surface and depended on the dimensions of grafted molecules. For infinitely variably tuning the number of functional groups process iii was performed as copolymerization of a functional group-carrying comonomer with a non-functionalized (“chain-extending”) comonomer. KW - Introduction of functional groups KW - Plasma modification KW - Reactions at Polymer surfaces PY - 2006 SN - 0340-255x SN - 1437-8027 VL - 132 SP - 62 EP - 71 PB - Springer CY - Berlin AN - OPUS4-12515 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Hoffmann, Katrin T1 - Reference Standard for the performance validation of fluroescence measuring systems T2 - Life Science Day 2011 CY - Berlin, Germany DA - 2011-08-26 PY - 2011 AN - OPUS4-24520 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -