TY - JOUR A1 - Martin-Sanchez, Pedro Maria A1 - Miller, A. Z. A1 - Garcia-Sanchez, A. M. A1 - Martin-Sanchez, Pedro Maria A1 - F.C. Pereira, M. A1 - Afonso, M. J. A1 - Saiz-Jimenez, C. A1 - Spangenberg, J. E. A1 - Jurado, V. A1 - Dionísio, A. A1 - Chaminé, H. I. A1 - Hermosin, B. T1 - Origin of abundant moonmilk deposits in a subsurface granitic environment N2 - Subsurface granitic environments are scarce and poorly investigated. A multi-disciplinary approach was used to characterize the abundant moonmilk deposits and associated microbial communities coating the granite walls of the 16th Century Paranhos spring water tunnel in Porto city (north-west Portugal). It is possible that this study is the first record of moonmilk in an urban subsurface granitic environment. The morphology and texture, mineralogical composition, stable isotope composition and microbial diversity of moonmilk deposits have been studied to infer the processes of moonmilk formation. These whitish secondary mineral deposits are composed of very fine needle fibre calcite crystals with different morphologies and density. Calcified filaments of fungal hyphae or bacteria were distinguished by field emission scanning electron microscopy. Stable isotope analysis revealed a meteoric origin of the needle fibre calcite, with an important contribution of atmospheric CO2, soil respiration and HCO3 − from weathering of Ca-bearing minerals. The DNA-based analyses revealed the presence of micro-organisms related to urban contamination, including Actinobacteria, mainly represented by Pseudonocardia hispaniensis, Thaumarchaeota and Ascomycota, dominated by Cladosporium. This microbial composition is consistent with groundwater pollution and contamination sources of the overlying urban area, including garages, petrol stations and wastewater pipeline leakage, showing that the Paranhos tunnel is greatly perturbed by anthropogenic activities. Whether the identified micro-organisms are involved in the formation of the needle fibre calcite or not is difficult to demonstrate, but this study evidenced both abiotic and biogenic genesis for the calcite moonmilk in this subsurface granitic environment. KW - Biomineralization KW - Carbonate precipitation KW - Granite KW - Moonmilk KW - Needle fibre calcite PY - 2017 UR - https://onlinelibrary.wiley.com/doi/full/10.1111/sed.12431 DO - https://doi.org/10.1111/sed.12431 SN - 1365-3091 VL - 65 IS - 2 SP - 1482 EP - 1503 PB - Wiley AN - OPUS4-43622 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Nilsson, R. H. A1 - Taylor, A. F. S. A1 - Adams, R. I. A1 - Baschien, C. A1 - Bengtsson-Palme, J. A1 - Cangren, P. A1 - Coleine, C. A1 - Iršėnaitė, R. A1 - Martin-Sanchez, Pedro Maria A1 - Meyer, W. A1 - Oh, S.-Y. A1 - Sampaio, J. P. A1 - Seifert, K. A. A1 - Sklenář, F. A1 - Stubbe, D. A1 - Suh, S.-O. A1 - Summerbell, R. A1 - Svantesson, S. A1 - Unterseher, M. A1 - Visagie, C. M. A1 - Weiss, M. A1 - Woudenberg, J. HC. A1 - Wurzbacher, C. A1 - Van den Wyngaert, S. A1 - Yilmaz, N. A1 - Yurkov, A. A1 - Kõljalg, U. A1 - Abarenkov, K. A1 - Daniel, H.-M. A1 - Glassman, S. I. A1 - Hirooka, H. A1 - Irinyi, L. T1 - Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK) N2 - Recent DNA-based studies have shown that the built environment is surprisingly rich in fungi. These indoor fungi – whether transient visitors or more persistent residents – may hold clues to the rising levels of human allergies and other medical and building-related health problems observed globally. The taxo¬nomic identity of these fungi is crucial in such pursuits. Molecular identification of the built mycobiome is no trivial undertaking, however, given the large number of unidentified, misidentified, and technically compromised fungal sequences in public sequence databases. In addition, the sequence metadata required to make informed taxonomic decisions – such as country and host/substrate of collection – are often lacking even from reference and ex-type sequences. Here we report on a taxonomic annotation workshop (April 10–11, 2017) organized at the James Hutton Institute/University of Aberdeen (UK) to facilitate reproducible studies of the built mycobiome. The 32 participants went through public fungal ITS bar¬code sequences related to the built mycobiome for taxonomic and nomenclatural correctness, technical quality, and metadata availability. A total of 19,508 changes – including 4,783 name changes, 14,121 metadata annotations, and the removal of 99 technically compromised sequences – were implemented in the UNITE database for molecular identification of fungi (https://unite.ut.ee/) and shared with a range of other databases and downstream resources. Among the genera that saw the largest number of changes were Penicillium, Talaromyces, Cladosporium, Acremonium, and Alternaria, all of them of significant importance in both culture-based and culture-independent surveys of the built environment. KW - Indoor mycobiome KW - Built environment KW - Molecular identification KW - Fungi KW - Taxonomy KW - Systematics KW - Sequence annotation KW - Metadata KW - Open data PY - 2018 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-438949 DO - https://doi.org/10.3897/mycokeys.28.20887 SN - 1314-4049 SN - 1314-4057 VL - 28 SP - 65 EP - 82 PB - Pensoft Publishers CY - Washington, DC AN - OPUS4-43894 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Angst, U.M. A1 - Geiker, M.R. A1 - Alonso, M.C. A1 - Polder, R. A1 - Isgor, O.B. A1 - Elsener, B. A1 - Wong, H. A1 - Michel, A. A1 - Hornbostel, K. A1 - Gehlen, C. A1 - François, R. A1 - Sanchez, M. A1 - Criado, M. A1 - Sørensen, H. A1 - Hansson, C. A1 - Pillai, R. A1 - Mundra, Shishir A1 - Gulikers, J. A1 - Raupach, M. A1 - Pacheco, J. A1 - Sagüés, A. T1 - The effect of the steel-concrete interface on chloride-induced corrosion initiation in concrete: a critical review by RILEM TC 262-SCI N2 - The steel–concrete interface (SCI) is known to influence corrosion of steel in concrete. However, due to the numerous factors affecting the SCI—including steel properties, concrete properties, execution, and exposure conditions—it remains unclear which factors have the most dominant impact on the susceptibility of reinforced concrete to corrosion. In this literature review, prepared by members of RILEM technical committee 262-SCI, an attempt is made to elucidate the effect of numerous SCI characteristics on chloride-induced corrosion initiation of steel in concrete. We use a method to quantify and normalize the effect of individual SCI characteristics based on different literature results, which allows comparing them in a comprehensive context. It is found that the different SCI characteristics have received highly unbalanced research attention. Parameters such as w/b ratio and cement type have been studied most extensively. Interestingly, however, literature consistently indicates that those parameters have merely a moderate effect on the corrosion susceptibility of steel in concrete. Considerably more pronounced effects were identified for (1) steel properties, including metallurgy, presence of mill scale or rust layers, and surface roughness, and (2) the moisture state. Unfortunately, however, these aspects have received comparatively little research attention. Due to their apparently strong influence, future corrosion studies as well as developments towards predicting corrosion initiation in concrete would benefit from considering those aspects. Particularly the working mechanisms related to the moisture conditions in microscopic and macroscopic voids at the SCI is complex and presents major opportunities for further research in corrosion of steel in concrete. KW - Steel-concrete interface KW - Interfacial transition zone KW - Durability KW - Corrosion KW - Inhomogeneity KW - Variability PY - 2019 DO - https://doi.org/10.1617/s11527-019-1387-0 VL - 52 IS - 4 SP - 88-1 EP - 88-25 PB - Springer Nature AN - OPUS4-48689 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Kang, Y. A1 - Nack, L. M. A1 - Liu, Y. A1 - Qi, B. A1 - Huang, Y. A1 - Liu, Z. A1 - Chakraborty, I. A1 - Schulz, F. A1 - Ahmed, A. A. A. A1 - Poveda, M. C. A1 - Hafizi, F. A1 - Roy, S. A1 - Mutas, M. A1 - Holzapfel, M. A1 - Sanchez-Cano, C. A1 - Wegner, Karl David A1 - Feliu, N. A1 - Parak, W. J. T1 - Quantitative considerations about the size dependence of cellular entry and excretion of colloidal nanoparticles for different cell types N2 - Most studies about the interaction of nanoparticles (NPs) with cells have focused on how the physicochemical properties of NPs will influence their uptake by cells. However, much less is known about their potential excretion from cells. However, to control and manipulate the number of NPs in a cell, both cellular uptake and excretion must be studied quantitatively. Monitoring the intracellular and extracellular amount of NPs over time (after residual noninternalized NPs have been removed) enables one to disentangle the influences of cell proliferation and exocytosis, the major pathways for the reduction of NPs per cell. Proliferation depends on the type of cells, while exocytosis depends in addition on properties of the NPs, such as their size. Examples are given herein on the role of these two different processes for different cells and NPs. KW - Cell proliferation KW - Exocytosis KW - Gold nanoparticles KW - Quantum dots KW - Fluorescence KW - Uptake studies PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-543476 DO - https://doi.org/10.1007/s40828-021-00159-6 SN - 2199-3793 VL - 8 IS - 1 SP - 1 EP - 8 PB - Springer CY - Berlin AN - OPUS4-54347 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Kang, Y. A1 - Nack, L. A1 - Liu, Y. A1 - Qi, B. A1 - Huang, Y. A1 - Liu, Z. A1 - Chakraborty, I. A1 - Schulz, F. A1 - Ahmed, A. A. A1 - Poveda, M. C. A1 - Hafizi, F. A1 - Roy, S. A1 - Mutas, M. A1 - Holzapfel, M. A1 - Sanchez-Cano, C. A1 - Wegner, Karl David A1 - Feliu, N. A1 - Parak, W. J. T1 - Correction to: Quantitative considerations about the size dependency for cellular entry and excretion of colloidal nanoparticles for different cell types N2 - We regret to inform that the labels "NPs which remain in endosomes/lysosomes" and "exocytosed NPs" had been erroneously swapped in the sketch on the right side in Figure 2. The corrected Fig. 2 is displayed below. WJP apologizes for this error. KW - Cell proliferation KW - Exocytosis KW - Gold nanoparticles KW - Quantum dots KW - Uptake studies PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-554519 DO - https://doi.org/10.1007/s40828-022-00168-z VL - 8 IS - 17 SP - 1 EP - 2 PB - Springer CY - Berlin AN - OPUS4-55451 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Churiaque, C. A1 - Sanchez-Amaya, J.M. A1 - Üstündag, Ömer A1 - Porrua-Lara, M. A1 - Gumenyuk, Andrey A1 - Rethmeier, Michael T1 - Improvements of hybrid laser arc welding for shipbuilding T-joints with 2F position of 8 mm thick steel N2 - the joints throughout the structure. The flat units are constituted by butt welded flat plates, on which longitudinal T-welded reinforcements are placed to rigidize the structure. Among the different welding technologies, Hybrid Laser Arc Welding (HLAW) is becoming a mature process, profitable and highly productive. In addition, more innovative welding equipment are being developed nowadays, offering greater work flexibility, and raising expectations of achieving better quality, and economic viability. Another key point of HLAW to keep in mind is that structural distortions are reduced, resulting in decreasing the cost and time of straightening work. In the present contribution, the influence of HLAW parameters on the quality of fillet joints of naval steel has been analysed. Experimental HLAW tests were performed with a high power disk laser to join EH36 naval steel plates, with a T configuration. The influence of different processing parameters has been analysed, as the laser power, welding speed, wire feed rate and the configuration of the HLAW processes (including head angle and laser/arc leading process). In addition, FEM simulations were carried out in order to estimate residual stresses and distortion of welded part. The distortion values provided by FEM presented excellent agreement with the measured experimental results. To evaluate the welds, non destructive tests including X-ray tests, metallographic analysis of cross sections, and microhardness mapping tests were performed. Full penetration 8 mm T welds were obtained for the first time at an industrially applicable 2F position with a reasonable HLAW head angle, in one single step without sealing root, and using zero gap square groove Edge preparation. The present contribution presents welding rates up to 2.2 m/min for 2F T-joints of this steel thickness, a much higher processing velocity than previously reported for industrial applications. KW - Hybrid laser arc welding PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-528410 DO - https://doi.org/10.1016/j.optlastec.2021.107284 VL - 143 SP - 1 EP - 20 PB - Elsevier Ltd. AN - OPUS4-52841 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Philipp, Rosemarie A1 - Lalere, B. A1 - Gantois, F. A1 - Sánchez, C. A1 - Sáez, A. A1 - Bebić, J. A1 - Banjanac, K. A1 - Alexopoulos, Ch. A1 - Kakoulides, E. A1 - Claramunt, A. V. A1 - Janko, P. A1 - Jotanovic, A. A1 - Hafner-Vuk, K. A1 - Buzoianu, M. A1 - Mihail, R. A1 - Fernández, M. M. A1 - Etcheverry, J. A1 - Mbithi Muendo, B. A1 - Muriira Karau, G. A1 - Silva, A. A1 - Almirón, F. A1 - Marajh, D. A1 - Makgatho, P. A1 - Visser, R. A1 - Alaskar, A. R. A1 - Alosaimi, A. A1 - Alrashed, M. A1 - Yılmaz, H. A1 - Ün, İ. A1 - Gündüz, S. A1 - Topal, K. A1 - Bilsel, M. A1 - Karasinski, J. A1 - Torres, J. T1 - Supplementary comparison study - measurement capabilities for the quantification of ethanol in water N2 - The accurate quantification of ethanol in water is essential for forensic applications such as blood and breath alcohol testing and for commercial applications such as the assessment of alcoholic beverages. The intercomparison EURAMET.QM-S14 is part of a capacity building project named ALCOREF “Certified forensic alcohol reference materials” that is running within the European Metrology Programme for Innovation and Research (EMPIR). The intercomparison should allow project partners and other interested National Metrology Institutes (NMIs) and Designated Institutes (DIs) to benchmark their analytical methods for the quantification of ethanol in water. The study plan was agreed by the European Association of National Metrology Institutes (EURAMET) Subcommittee Bio- and Organic Analysis (SCBOA) and the Organic Analysis Working Group (OAWG) of the Comité Consultatif pour la Quantité de Matière (CCQM) in February and April 2019, respectively. The intercomparison was coordinated by BAM. Two concentration levels relevant for the calibration and verification of evidential breath alcohol analysers were distributed to study participants. Fifteen institutes from 15 countries registered for the intercomparison and returned results. Participants mostly applied gas chromatography with flame ionisation detection (GC-FID) or mass spectroscopy (GC-MS), one participant used titrimetry and one participant employed a test bench for breath analyser calibration (“bubble train”). Participants did either in-house purity assessment of their commercial ethanol calibrants by Karl-Fischer titration, chromatographic methods, quantitative nuclear magnetic resonance spectroscopy (qNMR) and/or density measurements; or they used ethanol/water Certified Reference Materials (CRMs) from NMIs/DIs for calibration. CCQM OAWG agreed to use a consensus value from participants results that utilizes the reported uncertainties as Key Comparison Reference Value (KCRV). The Gaussian Random effects model with Hierarchical Bayesian solution (HB-REM) is a reasonable approach in this case. The KCRVs and Degrees of Equivalence (DoEs) were calculated with the NIST consensus builder version 1.2 Hierarchical Bayes procedure. Successful participation in the interlaboratory comparison has demonstrated the capabilities in determining the mass fraction of ethanol in aqueous matrices in the range 0.1 mg/g to 8 mg/g. Fourteen out of 15 participants have successfully quantified both samples, one participant successfully quantified only the lower-level (0.6 mg/g) sample. KW - Certified reference material KW - EURAMET KW - EMPIR KW - ALCOREF KW - Ethanol in water KW - Supplementary comparison PY - 2022 DO - https://doi.org/10.1088/0026-1394/59/1A/08015 VL - 59 IS - 1A SP - 08015 PB - IOP Publishing AN - OPUS4-55889 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Coutinho, M.L. A1 - Miller, A. Z. A1 - Martin-Sanchez, Pedro Maria A1 - Mirao, J. A1 - Gomez-Bolea, A. A1 - Machado-Moreira, B. A1 - Cerqueira-Alves, L. A1 - Jurado, V. A1 - Saiz-Jimenez,, C. A1 - Lima, A. A1 - Phillips, A. J. L. A1 - Pina, F. A1 - Macedo, M. F. T1 - A multiproxy approach to evaluate biocidal treatments on biodeteriorated majolica glazed tiles N2 - The Fishing House located on the grounds of the Marquis of Pombal Palace, Oeiras, Portugal, was built in the 18th century. During this epoch, Portuguese gardens, such as the one surrounding the Fishing House, were commonly ornamented with glazed wall tile claddings. Currently, some of these outdoor tile panels are covered with dark colored biofilms, contributing to undesirable aesthetic changes and eventually inducing chemical and physical damage to the tile surfaces. Phylogenetic analyses revealed that the investigated biofilms are mainly composed of green algae, cyanobacteria and dematiaceous fungi. With the aim of mitigating biodeterioration, four different biocides (TiO2 nanoparticles, Biotin® T, Preventol® RI 80 and Albilex Biostat®) were applied in situ to the glazed wall tiles. Their efficacy was monitored by visual examination, epifluorescence microscopy and DNA-based analysis. Significant changes in the microbial community composition were observed 4 months after treatment with Preventol® RI 80 and Biotin® T. Although the original community was inactivated after these treatments, an early stage of re-colonization was detected 6 months after the biocide application. TiO2 nanoparticles showed promising results due to their self-cleaning effect, causing the detachment of the biofilm from the tile surface, which remained clean 6 and even 24 months after biocide application. KW - Biofilm KW - Glazed tiles KW - Fungi PY - 2016 DO - https://doi.org/10.1111/1462-2920.13380 SN - 1462-2912 SN - 1462-2920 VL - 18 IS - 12 SP - 4794 EP - 4816 PB - Society for Applied Microbiology and John Wiley & Sons Ltd AN - OPUS4-37380 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Schoonjans, Tom A1 - Brunetti, A. A1 - Golosio, B. A1 - Sanchez del Rio, M. A1 - Solé, V. A. A1 - Ferrero, C. A1 - Vincze, L. T1 - xraylib 3.1.0 N2 - Quantitative estimate of elemental composition by spectroscopic and imaging techniques using X-ray fluorescence requires the availability of accurate data of X-ray interaction with matter. Although a wide number of computer codes and data sets are reported in literature, none of them is presented in the form of freely available library functions which can be easily included in software applications for X-ray fluorescence. This work presents a compilation of data sets from different published works and an xraylib interface in the form of callable functions. Although the target applications are on X-ray fluorescence, cross sections of interactions like photoionization, coherent scattering and Compton scattering, as well as form factors and anomalous scattering functions, are also available. xraylib provides access to some of the most respected databases of physical data in the field of x-rays. The core of xraylib is a library, written in ANSI C, containing over 40 functions to be used to retrieve data from these databases. This C library can be directly linked with any program written in C, C++ or Objective-C. Furthermore, the xraylib package contains bindings to several popular programming languages: Fortran 2003, Perl, Python, Java, IDL, Lua, Ruby, PHP and .NET, as well as a command-line utility which can be used as a pocket-calculator. Although not officially supported, xraylib has been reported to be useable from within Matlab and LabView. The source code is known to compile and run on the following platforms: Linux, Mac OS X, Solaris, FreeBSD and Windows. Development occurs on Github: http://github.com/tschoonj/xraylib Downloads are hosted by the X-ray Micro-spectroscopy and Imaging research group of Ghent University: http://lvserver.ugent.be/xraylib Version 3.1.0 release notes: - Database of commonly used radionuclides for X-ray sources added (new API: GetRadioNuclideDataByName, GetRadioNuclideDataByIndex, GetRadioNuclideDataList and FreeRadioNuclideData) - numpy Python bindings added, generated with Cython. Performance basically the same as the core C library. (suggested by Matt Newville) - docstring support added to Python bindings (suggested by Matt Newville) - Windows SDKs now have support for Python 3.4. - Windows 64-bit SDK now comes with IDL bindings - Confirmed support for LabView (thanks to Dariush Hampai!) - Universal Intel 32/64 bit Framework built for Mac OS X - Perl support for Debian/Ubuntu - Several bugfixes: thanks to those that reported them! KW - Quantitative estimation KW - Elemental composition KW - Spectroscopic techniques KW - Imaging techniques PY - 2014 DO - https://doi.org/10.5281/zenodo.12378 PB - Zenodo CY - Geneva AN - OPUS4-51924 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Schoonjans, Tom A1 - Vincze, L. A1 - Solé, V. A. A1 - Sanchez del Rio, M. A1 - Brondeel, P. A1 - Silversmit, G. A1 - Appel, K. A1 - Ferrero, C. T1 - XMI-MSIM 5.0 N2 - XMI-MSIM is an open source tool designed for predicting the spectral response of energy-dispersive X-ray fluorescence spectrometers using Monte-Carlo simulations. It comes with a fully functional graphical user interface in order to make it as user friendly as possible. Considerable effort has been taken to ensure easy installation on all major platforms. Development of this package was part of my PhD thesis. The algorithms were inspired by the work of my promotor Prof. Laszlo Vincze of Ghent University. Links to his and my own publications can be found in our manual. A manuscript has been published in Spectrochimica Acta Part B that covers the algorithms that power XMI-MSIM. Please include a reference to this publication in your own work if you decide to use XMI-MSIM for academic purposes. A second manuscript was published that covers our XMI-MSIM based quantification plug-in for PyMca. Soon information on using this plug-in will be added to the manual. XMI-MSIM is released under the terms of the GPLv3. Development occurs at Github: http://github.com/tschoonj/xmimsim Downloads are hosted by the X-ray Micro-spectroscopy and Imaging research group of Ghent University: http://lvserver.ugent.be/xmi-msim Version 5.0 release notes: Changes: 1. Custom detector response function: build a own plug-in containing your own detector response function and load it at run-time to override the builtin routines. Instructions can be found in the manual. 2. Escape peak improvements: new algorithm is used to calculate the escape peak ratios based on a combined brute-force and variance-reduction approach. Ensures high accuracy even at high incoming photon energies and thin detector crystals. Downside: it's slower… 3. Removed maximum convolution energy option. Was a bit confusing anyway. 4. Number of channels: moved from simulation controls into input-file 5. Radionuclide support added: Now you can select one or more commonly used radionuclide sources from the X-ray sources widget. 6. Advanced Compton scattering simulation: a new alternative implementation of the Compton scattering has been implemented based on the work of Fernandez and Scot (http://dx.doi.org/10.1016/j.nimb.2007.04.203), which takes into account unpopulated atomic orbitals. Provides an improved simulation of the Compton profile, as well as fluorescence contributions due to Compton effect (extremely low!), but slows the code down considerably. Advanced users only. Default: OFF 7. Plot spectra before convolution in results 8. Windows: new Inno Setup installers. Contains the headers and import libraries 9. Windows: compilers changed to GCC 4.8.1 (TDM-GCC) 10. Windows: rand_s used to generate seeds on 64-bit version (requires Vista or later) 11. Windows: new gtk runtime for the 64-bit version (see also https://github.com/tschoonj/GTK-for-Windows-Runtime-Environment-Installer) 12. Mac OS X: compilers changed to clang 5.1 (Xcode) and gfortran 4.9.1 (MacPorts) 13. Original input-files from our 2012 publication (http://dx.doi.org/10.1016/j.sab.2012.03.011) added to examples 14. Updater performs checksum verification after download 15. X-ray sources last used values stored in preferences.ini 16. xmimsimdata.h5 modified: even bigger now... Bugfixes: 1. Windows: support for usernames with unicode characters. Fixed using customized builds of HDF5. Thanks to Takashi Omori of Techno-X for the report! 2. Spectrum import from file fixes. Was never properly tested apparently Note: For those that compiled XMI-MSIM from source: you will need to regenerate the xmimsimdata.h5 file with xmimsim-db. Old versions of this file will not work with XMI-MSIM 5.0. KW - Spectral response KW - Energy-dispersive X-ray fluorescence spectrometers KW - Monte-Carlo simulations PY - 2014 DO - https://doi.org/10.5281/zenodo.12381 PB - Zenodo CY - Geneva AN - OPUS4-51925 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Churiaque Bermejo, C. A1 - Sánchez-Amaya, J. M. A1 - Porrúa-Lara, M. A1 - Gumenyuk, Andrey A1 - Rethmeier, Michael T1 - The Effects of HLAW Parameters for One Side T-Joints in 15 mm Thickness Naval Steel N2 - The present contribution is the first research reporting full penetration HLAW joints in 15 mm thick EH36 steel butt T-welds with square grooves on 2F welding position by single-sided welding. The effects of welding parameters were investigated to increase the quality of the joints. Conditions leading to defect-free full penetration welds fulfilling naval regulations includes a laser power of 12.5 kW, a welding speed of 1.6 m/min and the vertical laser offset distance from the flange of 1 mm. Advanced characterization of selected welds included a microstructural identification by optical microscopy, SEM, and XRD, revealing the presence of acicular, polygonal and Widmanstätten ferrite, lath martensite, and some retained austenite at FZ. Hardness and microhardness mapping tests showed values of 155 HV at base metal and 200 to 380 HV at the fusion zone connecting the web to the flange. KW - Ship building KW - Laser beam welding KW - Hybrid laser arc welding PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-523931 DO - https://doi.org/10.3390/met11040600 VL - 11 IS - 4 SP - 600 PB - MDPI CY - Basel, Switzerland AN - OPUS4-52393 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - De la Rosa, J. M. A1 - Martin-Sanchez, Pedro Maria A1 - Santiago-Cortes, S. A1 - Hermosin, B. A1 - Knicker, H. A1 - Saiz-Jimenez, C. ED - De la Rosa, J. M. T1 - Structure of melanins from the fungi Ochroconis lascauxensis and Ochroconis anomala contaminating rock art in the Lascaux Cave N2 - Two novel species of the fungal genus Ochroconis, O. lascauxensis and O. anomala have been isolated from the walls of the Lascaux Cave, France. The interest in these fungi and their melanins lies in the formation of black stains on the walls and rock art which threatens the integrity of the paintings. Here we report solid-state cross polarization magic-angle spinning 13C and 15N nuclear magnetic resonance (NMR) spectroscopy and surface-enhanced Raman spectroscopy (SERS) of the melanins extracted from the mycelia of O. lascauxensis and O. anomala in order to known their chemical structure. The melanins from these two species were compared with those from other fungi. The melanins from the Ochroconis species have similar SERS and 13C and 15N NMR spectra. Their chemical structures as suggested by the data are not related to 3,4-dihydroxyphenylalanine, 5,6-dihydroxyindole or 1,8-dihydroxynaphthalene precursors and likely the building blocks from the melanins have to be based on other phenols that react with the N-terminal amino acid of proteins. The analytical pyrolysis of the acid hydrolysed melanin from O. lascauxensis supports this assumption. KW - Microbiology KW - Biodeterioration KW - Melanins KW - Fungi PY - 2017 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-435345 DO - https://doi.org/10.1038/s41598-017-13862-7 SN - 2045-2322 VL - 7 SP - 13441, 1 EP - 13441, 11 PB - Nature AN - OPUS4-43534 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Garcia-Fernandez, J. A1 - Turiel, D. A1 - Bettmer, J. A1 - Jakubowski, Norbert A1 - Panne, Ulrich A1 - Rivas Garcia, L. A1 - Llopis, J. A1 - Sanchez-Gonzalez, C. A1 - Montes-Bayon, M. T1 - In vitro and in situ experiments to evaluate the biodistribution and cellular toxicity of ultrasmall iron oxide nanoparticles potentially used as oral iron supplements N2 - Well-absorbed iron-based nanoparticulated materials are a promise for the oral management of iron deficient anemia. In this work, a battery of in vitro and in situ experiments are combined for the evaluation of the uptake, distribution and toxicity of new synthesized ultrasmall (4 nm core) Fe2O3 nanoparticles coated with tartaric/adipic acid with potential to be used as oral Fe supplements. First, the in vitro simulated gastric acid solubility studies by TEM and HPLC-ICP-MS reveal a partial reduction of the core size of about 40% after 90 min at pH3. Such scenario confirms the arrival of the nanoparticulate material in the small intestine. In the next step, the in vivo absorption through the small intestine by intestinal perfusion experiments is conducted using the sought nanoparticles in Wistar rats. The quantification of Fe in the NPs Suspension before and after perfusion shows Fe absorption levels above 79%, never reported for other Fe treatments. Such high absorption levels do not seem to compromise cell viability, evaluated in enterocytes-like models (Caco-2 and HT-29) using cytotoxicity, ROS production, genotoxicity and lipid peroxidation tests. Moreover, regional differences in terms of Fe concentration are obtained among different parts of the small intestine as duodenum>jejunum>ileum. Complementary transmission electron microscopy (TEM) images show the presence of the intact particles around the intestinal microvilli without significant tissue damage. These studies show the high potential of these NP preparations for their use as oral management of anemia. KW - Iron nanoparticles KW - Anemia KW - ICP-MS KW - In vitro KW - In situ PY - 2020 DO - https://doi.org/10.1080/17435390.2019.1710613 VL - 14 IS - 3 SP - 388 EP - 403 PB - Taylor & Francis Online CY - London AN - OPUS4-50314 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - García Fernández, J. A1 - Sánchez-González, C. A1 - Bettmer, J. A1 - Llopi, J. A1 - Jakubowski, Norbert A1 - Panne, Ulrich A1 - Montes-Bayón, M. T1 - Quantitative assessment of the metabolic products of iron oxide nanoparticles to be used as iron supplements in cell cultures N2 - Iron nanoparticles (NPs) metabolism is directly associated to human health due to their use as anemia treatment and should be studied in detail in cells. Here we present a speciation strategy for the determination of the metabolic products of iron oxide nanoparticles coated by tartaric and adipic acids in enterocytes-like cell models (Caco-2 and HT-29). Such methodology is based on the use of SDS-modified reversed phase high performance liquid chromatography (HPLC) separation using inductively coupled plasma-mass spectrometry (ICP-MS) as Fe selective detector. Post-column isotope dilution analysis is used as quantification tool by adding Fe-57 as isotopically enriched standard. To assess the separation capability of the method, two different iron nanostructures: iron sucrose nanoparticles -Venofer®- used as model suspension and iron tartrate/adipate-modified nanoparticles, both of about 4 nm (core size) were evaluated. The two nanostructures were injected into the system showing good peak profiles and quantitative elution recoveries (>80%) in both cases. In addition, both nanoparticulate fractions could be based-line separated from ionic iron species, which needed to be complexed with 1mM citrate to elute from the column. Exposed cells up to 0.5mM of iron tartrate/adipate-modified nanoparticles were specifically treated to extract the internalized NPs and the extracts examined using the proposed strategy. The obtained results revealed the presence of three different fractions corresponding to nanoparticle aggregates, dispersed nanoparticles and soluble iron respectively in a single chromatographic run. Quantitative experiments (column recoveries ranging from 60 to 80%) revealed the presence of the majority of the Fe in the nanoparticulated form (>75%) by summing up the dispersed and aggregate particles. Such experiments point out the high uptake and low solubilization rate of the tartrate/adipate NPs making these structures highly suitable as Fe supplements in oral anemia treatments. KW - Fe nanoparticles metabolism KW - Cells KW - HPLC-ICP-MS KW - Species-unspecific on-line isotope dilution PY - 2018 DO - https://doi.org/10.1016/j.aca.2018.08.003 SN - 0003-2670 VL - 1039 SP - 24 EP - 30 PB - Elsevier CY - Amsterdam AN - OPUS4-46817 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - C., Ruibal A1 - L., Selbmann A1 - Serap, Avci A1 - Martin-Sanchez, Pedro Maria A1 - Gorbushina, Anna ED - Gorbushina, Anna T1 - Roof-Inhabiting Cousins of Rock-Inhabiting Fungi: Novel Melanized Microcolonial Fungal Species from Photocatalytically Reactive Subaerial Surfaces N2 - Subaerial biofilms (SAB) are an important factor in weathering, biofouling, and biodeterioration of bare rocks, building materials, and solar panel surfaces. The realm of SAB is continually widened by modern materials, and the settlers on these exposed solid surfaces always include melanized, stress-tolerant microcolonial ascomycetes. After their first discovery on desert rock surfaces, these melanized chaetothyrialean and dothidealean ascomycetes have been found on Mediterranean monuments after biocidal treatments, Antarctic rocks and solar panels. New man-made modifications of surfaces (e.g., treatment with biocides or photocatalytically active layers) accommodate the exceptional stress-tolerance of microcolonial fungi and thus further select for this well-protected ecological group. Melanized fungal strains were isolated from a microbial community that developed on highly photocatalytic roof tiles after a long-term environmental exposure in a maritime-influenced region in northwestern Germany. Four of the isolated strains are described here as a novel species, Constantinomyces oldenburgensis, based on multilocus ITS, LSU, RPB2 gene phylogeny. Their closest relative is a still-unnamed rock-inhabiting strain TRN431, here described as C. patonensis. Both species cluster in Capnodiales, among typical melanized microcolonial rock fungi from different stress habitats, including Antarctica. These novel strains flourish in hostile conditions of highly oxidizing material surfaces, and shall be used in reference procedures in material testing. KW - Microcolonial fungi KW - Multilocus phylogeny KW - Photocatalytic surfaces KW - Subaerial biofilms KW - Stress tolerance KW - Constantinomyces PY - 2018 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-455182 DO - https://doi.org/10.3390/life8030030 VL - 8 IS - 3 SP - 30 EP - 44 PB - MDPI CY - Basel, Schweiz AN - OPUS4-45518 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -