TY - JOUR A1 - Arıkan, Muzaffer A1 - Demir, Tuğçe Kahraman A1 - Yıldız, Zeynep A1 - Nalbantoğlu, Özkan Ufuk A1 - Korkmaz, Nur Damla A1 - Yılmaz, Nesrin H. A1 - Şen, Aysu A1 - Özcan, Mutlu A1 - Muth, Thilo A1 - Hanoğlu, Lütfü A1 - Yıldırım, Süleyman T1 - Metaproteogenomic analysis of saliva samples from Parkinson's disease patients with cognitive impairment N2 - Cognitive impairment (CI) is very common in patients with Parkinson’s Disease (PD) and progressively develops on a spectrum from mild cognitive impairment (PD-MCI) to full dementia (PDD). Identification of PD patients at risk of developing cognitive decline, therefore, is unmet need in the clinic to manage the disease. Previous studies reported that oral microbiota of PD patients was altered even at early stages and poor oral hygiene is associated with dementia. However, data from single modalities are often unable to explain complex chronic diseases in the brain and cannot reliably predict the risk of disease progression. Here, we performed integrative metaproteogenomic characterization of salivary microbiota and tested the hypothesis that biological molecules of saliva and saliva microbiota dynamically shift in association with the progression of cognitive decline and harbor discriminatory key signatures across the spectrum of CI in PD. We recruited a cohort of 115 participants in a multi-center study and employed multi-omics factor analysis (MOFA) to integrate amplicon sequencing and metaproteomic analysis to identify signature taxa and proteins in saliva. Our baseline analyses revealed contrasting interplay between the genus Neisseria and Lactobacillus and Ligilactobacillus genera across the spectrum of CI. The group specific signature profiles enabled us to identify bacterial genera and protein groups associated with CI stages in PD. Our study describes compositional dynamics of saliva across the spectrum of CI in PD and paves the way for developing non-invasive biomarker strategies to predict the risk of CI progression in PD. KW - Cognitive impairment (CI) KW - Parkinson’s disease (PD) KW - Metaproteogenomic analysis KW - Saliva sample PY - 2023 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-624228 DO - https://doi.org/10.1038/s41522-023-00452-x SN - 2055-5008 VL - 9 IS - 1 SP - 1 EP - 10 PB - Nature Publ. Group CY - London AN - OPUS4-62422 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -