TY - JOUR A1 - Ibrahim, B. A1 - Arkhipova, K. A1 - Andeweg, A.C. A1 - Posada-Céspedes, S. A1 - Enault, F. A1 - Gruber, A. A1 - Koonin, E.V. A1 - Kupczok, A. A1 - Lemey, P. A1 - McHardy, A.C. A1 - McMahon, Dino Peter A1 - Pickett, B.E. A1 - Robertson, D.L. A1 - Scheuermann, R.H. A1 - Zhernakova, A. A1 - Zwart, M.P. A1 - Schönhuth, A. A1 - Dutilh, B.E. A1 - Marz, M. T1 - Bioinformatics meets virology: The European virus bioinformatics center's second annual meeting N2 - The Second Annual Meeting of the European Virus Bioinformatics Center (EVBC), held in Utrecht, Netherlands, focused on computational approaches in virology, with topics including (but not limited to) virus discovery, diagnostics, (meta-)genomics, modeling, epidemiology, molecular structure, evolution, and viral ecology. The goals of the Second Annual Meeting were threefold: (i) to bring together virologists and bioinformaticians from across the academic, industrial, professional, and training sectors to share best practice; (ii) to provide a meaningful and interactive scientific environment to promote discussion and collaboration between students, postdoctoral fellows, and both new and established investigators; (iii) to inspire and suggest new research directions and questions. Approximately 120 researchers from around the world attended the Second Annual Meeting of the EVBC this year, including 15 renowned international speakers. This report presents an overview of new developments and novel research findings that emerged during the meeting. KW - Bioinformatics KW - Software KW - Virology KW - Viruses PY - 2018 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:b43-458814 SN - 1999-4915 VL - 10 IS - 5 SP - 256, 1 EP - 19 PB - MDPI AN - OPUS4-45881 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hudson, A.D. A1 - Jamieson, O. A1 - Crapnell, R.D. A1 - Rurack, Knut A1 - Soares, T.C.C. A1 - Mecozzi, F. A1 - Laude, A. A1 - Gruber, J. A1 - Novakovic, K. A1 - Peeters, M. T1 - Dual detection of nafcillin using a molecularly imprinted polymer-based platform coupled to thermal and fluorescence read-out N2 - Reported here is the production of molecularly imprinted polymer (MIP) films, integrating a fluorescent moiety that serves as both an element for template interaction and signalling, for the thermal and optical detection of the beta-lactam antibiotic nafcillin. Fluorescein methacrylate (FluMa) was synthesized and introduced during the molecular imprinting process as the sole monomer and in a 1 : 1 mixture with methacrylic acid (MAA), allowing to draw first conclusions on the MIP formation potential of such a rather large and rigid monomer. At first, MIP microparticles containing FluMa were prepared by free radical polymerisation. Optical batch rebinding experiments revealed that FluMa can act as a functional monomer for selective detection of nafcillin; however, the addition of MAA as co-monomer significantly improved performance. Subsequently, thin MIP films containing FluMa were deposited onto functionalised glass slides and the influence of porogen, drying time, and monomer composition was studied. These MIP-functionalised glass electrodes were mounted into a customised 3D-printed flow cell, where changes in the liquid were either evaluated with a thermal device or using fluorescence bright field microscopy. Thermal analysis demonstrated that multiple MIP layers enhanced sensor specificity, with detection in the environmentally relevant range. The fluorescence bright field microscope investigations validated these results, showing an increase in the fluorescence intensity upon exposure of the MIP-functionalised glass slides to nafcillin solutions. These are promising results for developing a portable sensor device that can be deployed for antibiotics outside of a dedicated laboratory environment, especially if sensor design and fluorophore architecture are optimised. KW - Molecularly Imprinted Polymers KW - Fluorescence KW - Antibiotics KW - Heat-transfer Measurements KW - Thin films PY - 2021 U6 - http://nbn-resolving.de/urn/resolver.pl?urn:nbn:de:kobv:b43-540044 VL - 2 IS - 15 SP - 5105 EP - 5115 PB - Royal Society of Chemistry CY - Cambridge AN - OPUS4-54004 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Kolar, J. A1 - Strlic, M. A1 - Müller-Hess, D. A1 - Gruber, A. A1 - Troschke, K. A1 - Pentzien, Simone A1 - Kautek, Wolfgang T1 - Near-UV and visible pulsed laser interaction with paper N2 - The applicability of excimer laser at 308 nm and Nd:YAG laser at 532 nm with fluences below 0.86 J/cm2 for cleaning of cellulose and paper materials was evaluated. The extent of degradation of purified cotton cellulose and Fabriano paper after laser treatment as well as after a period of accelerated humid oven ageing was determined by following the changes in the degree of polymerization. While irradiation of paper with the excimer laser at 308 nm results in depolymerization of cellulose accompanied by a decrease in ISO brightness, no detrimental effects of Nd:YAG laser treatments were observed. PY - 2000 U6 - https://doi.org/10.1016/S1296-2074(00)00149-7 SN - 1296-2074 SN - 1778-3674 VL - 1 IS - sup.1 SP - 221 EP - 224 PB - Elsevier CY - Paris AN - OPUS4-5979 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Körner, W. A1 - Walker, G. A1 - Horn, Wolfgang A1 - Woppowa, L. A1 - Gruber, L. A1 - Hansen, D. A1 - Haring, C. A1 - Hartmann, R. A1 - Heitmann, D. A1 - Karn, C. A1 - Uhde, E. A1 - Winkens, A. T1 - Messen von Phthalaten in der Innenraumluft mit GC/MS N2 - Im Rahmen der Richtlinienarbeit der Kommission Reinhaltung der Luft im VDI und DIN - Normenausschuss KRdL wurde ein Ringversuch zur Validierung des Analysenverfahrens für Phthalate in der Innenraumluft durchgeführt. Dabei wurden die beiden in der künftigen Richtlinie beschriebenen Analysenverfahren der Thermodesorption von Adsorptionsröhrchen sowie der Lösemittelextraktion von Florisilröhrchen mit jeweils anschließender Gaschromatographie und Massenspektrometrie (GC/MS) erprobt. Die Ergebnisse des Ringversuchs belegen die Vergleichbarkeit der beiden Verfahren. Auch die Richtigkeit der Ergebnisse im Rahmen einer akzeptablen Streuung sowie die Praktikabilität in der Praxis konnten bestätigt werden. Weiterhin wurden wichtige Erkenntnisse zur Minimierung der Blindwerte erarbeitet. KW - Emissionen KW - Richtlinie KW - Phthalate KW - Ringversuch PY - 2010 SN - 0949-8036 SN - 0039-0771 SN - 1436-4891 VL - 70 IS - 3 SP - 89 EP - 92 PB - Springer-VDI-Verl. CY - Düsseldorf AN - OPUS4-20998 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hiebl, B. A1 - Ascher, Lena A1 - Luetzow, K. A1 - Kratz, K. A1 - Gruber, C. A1 - Mrowietz, C. A1 - Nehring, M. E. A1 - Lendlein, A. A1 - Franke, R.- P. A1 - Jung, F. T1 - Albumin solder covalently bound to a polymer membrane: New approach to improve binding strength in laser tissue soldering in-vitro N2 - Laser tissue soldering (LTS) based on indocyanine green (ICG)-mediated heat- denaturation of proteins might be a promising alternative technique for micro-suturing, but up to now the Problem of too weak shear strength of the solder welds in comparison to sutures is not solved. Earlier reports gave promising results showing that solder supported by carrier materials can enhance the cohesive strength of the liquid solder. In these studies, the solder was applied to the carriers by dip coating. Higher reliability of the connection between the solder and the carrier material is expected when the solder is bound covalently to the carrier material. In the present study a poly(ether imide) (PEI) membrane served as carrier material and ICG- supplemented albumin as solder substrate. The latter was covalently coupled to the carrier membrane under physiological conditions to prevent structural protein changes. As laser source a diode continuous-wave laser emitting at 808 nm with intensities between 250mW and 1500mW was utilized. The Albumin functionalized carrier membrane was placed onto the tunica media of explanted pig thoracic aortae forming an overlapping area of approximately 0.5×0.5 cm2. All tests were performed in a dry state to prevent laser light absorption by water. Infrared spectroscopy, spectro-photometrical determination of the secondary and Primary amine groups after acid orange II staining, contact angle measurements, and atomic force microscopy proved the successful functionalization of the PEI membrane with albumin. A laser power of 450mW LTS could generate a membrane-blood vessel connection which was characterized by a shear strength of 0.08±0.002MPa, corresponding to 15% of the tensile strength of the native blood vessel. Theoretically, an overlapping zone of 4.1mmaround the entire circumference of the blood vessel could have provided shear strength of the PEI membrane-blood vessel compound identical to the tensile strength of the native blood vessel. These in-vitro results confirmed the beneficial effects of solder reinforcement by carrier membranes, and suggest LTS with covalently bound solders on PEI substrates for further studies in animal models. KW - Tissue soldering KW - Albumin KW - Polymer membrane KW - Laser PY - 2018 U6 - https://doi.org/10.3233/CH-189108 SN - 1386-0291 SN - 1875-8622 VL - 69 IS - 1-2 SP - 317 EP - 326 PB - IOS Press AN - OPUS4-45149 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -