TY - GEN A1 - Pauw, Brian Richard T1 - Trinamic TMCL IOC for exposing Trinamics motor controllers to EPICS CA N2 - Trinamic TMCL IOC is a Python package designed for controlling stepper motors connected to a Trinamic board using the TMCL language (all boards supported by PyTrinamic should now work, has been tested on the TMCM 6110 and the TMCM 6214). Since it is implementing the TMCL protocol, it should be easy to adapt to other Trinamic motor controller boards. This package assumes the motor controller is connected over a machine network via a network-to-serial converter, but the underlying PyTrinamic package allows for other connections too. This allows the control of attached motors via the EPICS Channel-Access virtual communications bus. If EPICS is not desired, plain Pythonic control via motion_control should also be possible. An example for this will be provided in the example.ipynb Jupyter notebook. This package leverages Caproto for EPICS IOCs and a modified PyTrinamic library for the motor board control, and interfaces between the two via an internal set of dataclasses. Configuration for the motors and boards are loaded from YAML files (see tests/testdata/example_config.yaml). The modifications to PyTrinamic involved extending their library with a socket interface. This was a minor modification that should eventually find its way into the official package (a pull request has been submitted). KW - Instrumentation KW - Motor controller KW - EPICS KW - Channel access KW - Instrument control KW - Laboratory automation PY - 2024 DO - https://doi.org/10.5281/zenodo.10792593 PB - Zenodo CY - Geneva AN - OPUS4-59624 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - The Dark Side of Science (2024.v2 edition) N2 - This talk introduces the dark side of science (the ever increasing levels of fraudulent activities in science and scientific publishing). It furthermore explores why the focus on inherently limited metrics drives this phenomenon, and how one can arm themselves against going down this gradient. Tools and tips are presented to enable assessment of other works, and what can be done in general to move away from this. T2 - Informationsmanagement“ im Master Lebensmitteltechnologie CY - Berlin, Germany DA - 26.11.2024 KW - Research fraud KW - Scientific misconduct KW - Literature research KW - Materials science PY - 2024 AN - OPUS4-61792 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - The Dark Side of Science (2024 edition) N2 - This presentation highlights ongoing scientific misconduct as found in academic literature. This includes data- and image manipulation, and paper mills. Starting with an expose of examples, it delves deeper into the causes and metrics driving this phenomenon. Finally a range of possible tools is presented, that the young researcher can use to prevent themselves from sliding into the dark scientific methods. T2 - Winter School on Metrology and Nanomaterials for Clean Energy CY - Claviere, Italy DA - 28.01.2024 KW - Scientific misconduct KW - Data manipulation KW - Image manipulation KW - Paper mills KW - Causes leading to scientific misconduct KW - Tools to combat scientific misconduct KW - Metrics PY - 2024 AN - OPUS4-59622 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - Glimpses of the future: Systematic investigations of 1200 mofs using a highly automated, full-stack materials research laboratory N2 - By automatically recording as much information as possible in automated laboratory setups, reproducibility and traceability of experiments are vastly improved. This presentation shows what such an approach means for the quality of experiments in an X-ray scattering laboratory and an automated synthesis set-up. T2 - Winter School on Metrology and Nanomaterials for Clean Energy CY - Claviere, Italy DA - 28.01.2024 KW - Digitalization KW - Automation KW - Digital laboratory KW - Scattering KW - Synthesis KW - Nanomaterials KW - Holistic science PY - 2024 AN - OPUS4-59621 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - Small-angle scattering for everyone: How to unlock the power of this ancient technique N2 - The obscure, yet fundamental technique of scattering can unlock essential information on the fine structure of materials. For you, it can help you understand how your batteries charge, how squid backbones work, or how hundreds of small variations in your syntheses affect your samples. As a nondestructive technique, it also measures your materials *in situ* or operando, as you pull it, heat it, electrify it, or align it one way or another. Scattering can be done using light, X-rays, neutrons, and even electrons, giving you the choice on which probe is best for you. The only downside? Scattering will always remain a complicated technique to do right. The technique gives you only one piece of information: the length distribution of density in your sample. How you interpret this (rather abstract) piece of information is up to you and your samples. Unlike microscopy, where the real-space image can be interpreted almost intuitively and artefacts are easier to spot, in scattering you cannot always easily identify artefacts. Therefore, the only way to do scattering experiments correctly is through rigour and care. For those of us with that particular eccentricity, seeing the rigour and care pay off is exhilarating, and opens the door to a life of happiness and excitement. This lecture will introduce scattering (in particular using X-rays and neutrons), what it is, what you can (and cannot) get out of it, and how to approach your scattering experiment. Regarding the experimental section, it will discuss the five parts that make up a successful scattering experiment based on real-life examples: Preparation: which and how you prepare your samples affects what you can get out of the interpretation Measurement: The machine design and your measurement choices dictates the final quality of your data Correction: Obtaining trustworthy scattering curves will greatly improve the speed and quality of your analysis. Analysis: Do you linearize, use generic scattering models, perform classical least-squares fitting, play with Monte-Carlo analysis or transform your data.. Some tips to help you make a choice. Interpretation: what does the analysis of all your samples tell you? Can you fit the puzzle pieces together to form a piece of knowledge? For further information, please feel free to explore the https://lookingatnothing.com/ weblog, the https://youtube.com/drheaddamage video channel, or by asking me in person or by email for specific questions at brian.pauw@bam.de . Some introductory reading can be found in the following papers: Pauw, B. R. (2013): Everything SAXS: small-angle scattering pattern collection and correction. _J. Phys.: Condens. Matter_ 25: 383201. DOI: [10.1088/0953-8984/25/38/383201](http://dx.doi.org/10.1088/0953-8984/25/38/383201) B. R. Pauw, A. J. Smith, T. Snow, N. J. Terrill, A. F. Thünemann, (2017): The modular SAXS data correction sequence for solids and dispersions, _Journal of Applied Crystallography_, 50: 1800–1811, DOI: [10.1107/S1600576717015096](https://doi.org/10.1107/S1600576717015096) G. J. Smales, B. R. Pauw (2021): The MOUSE project: a meticulous approach for obtaining traceable, wide-range X-ray scattering information. _Journal of instrumentation_ 16 (6) P06034. DOI: [10.1088/1748-0221/16/06/P06034](https://doi.org/10.1088/1748-0221/16/06/P06034) T2 - SAS School at the XIX International Small Angle Scattering Conference CY - Taipei, Taiwan DA - 02.11.2024 KW - X-ray scattering KW - Neutron scattering KW - Scattering KW - X-ray KW - Neutron KW - Introduction KW - Methodology PY - 2024 AN - OPUS4-61623 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - Chasing perfection: A holistic approach to materials science scattering experiments N2 - The materials scientists we work with do not want (or need) to learn the ways of the scatterer; they are primarily interested in obtaining trustworthy answers. In particular, they need structural understanding in light of the wider framework of their experiment(s). Our interest, therefore, lies in helping them attain this this interconnected understanding, while using such investigations to further hone our methodology to approximate perfection. While perfection is by definition an unattainable goal, we have spent the last 15+ years exploring and expanding on many of its constituent aspects (often together with likeminded people) [1]. These aspects include: - developing various visualization and simulation tools, - deconstructing data corrections and uncertainty estimation, - advancing analysis methods, - quantifying questions on traceability, documentation, - reproducible automation of synthesis-, measurement- and data pipelines, - data visualization, exploration and education, - and many more… T2 - XIX International Small Angle Scattering Conference CY - Taipei, Taiwan DA - 04.11.2024 KW - Methodology KW - X-ray scattering KW - Data quality KW - Data provenance KW - Data stewardship KW - Lab automation KW - Perfection PY - 2024 AN - OPUS4-61625 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - Laboratory x-ray scattering instruments as agile test-beds towards holistic experimentation N2 - Laboratory sources offer a unique advantage compared to synchrotron sources, largely in terms of freedom of operation. This freedom from user obligations, technology and software stacks and legacy decisions make the laboratory a very flexible place to develop and explore new ideas. The unparalleled availability furthermore allows for iterative improvement of instrumentation, sample environments and measurement methodologies to maximise the quality of the data obtained. This talk will highlight the use of the laboratory as an agile test-bed and development space, by giving examples of some complete and incomplete investigations undertaken in our laboratory over the last years. Furthermore, it will introduce the concept of holistic experimentation, where the laboratory provides broad-ranging support for materials science investigations. This means that we assist in the experimental preparation, perform the measurements, correction and analysis, and follow-up with assistance in interpretation of our analyses in light of the results from other techniques applied to the investigation. T2 - Invited talk at Diamond Light Source CY - Didcot, UK DA - 22.05.2024 KW - X-ray scattering KW - Methodology development KW - Laboratory management KW - Holistic experimentation KW - Laboratory automation KW - Nanostructural analysis PY - 2024 AN - OPUS4-60582 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Pauw, Brian Richard T1 - Getting down to business: pragmatic solutions for laboratory automation N2 - A chemical engineer by training, Brian drifted towards physics and now focuses on a broad spectrum of activities with the aim to improve scientific reproducibility. This includes studies on holistically improving data quality, data collection efficiency and traceability, as well as concomitant laboratory automation for the preparation of consistent, well-documented sample series. The need for pragmatism led to an inexpensive, flexible laboratory automation platform that can be implemented in a modest amount of time. This talk presents that effort. T2 - Future Labs Live 2024 CY - Basel, Switzerland DA - 25.06.2024 KW - Laboratory automation KW - Experiment tracking KW - Holistic experimentation KW - Experimental traceability KW - Data visualisation KW - Parameter correlation. PY - 2024 AN - OPUS4-60583 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Smales, Glen Jacob A1 - Pauw, Brian Richard T1 - DACHS/MOFs/AutoMOFs_2/Synthesis N2 - The DACHS (Database for Automation, Characterization and Holistic Synthesis) project aims to create completely traceable experimental data, covering syntheses, measurements, analyses, and interpretations. DACHS_MOFs focuses on the synthesis and characterisation of metal-organic frameworks, across multiple, automation-assisted experimental series (AutoMOFs), with the overall goal of producing reproducible MOF samples through tracking of the synthesis parameters. DACHS_MOFs is simultaneously used to test the DACHS principles. This upload contain synthesis data from AutoMOFs_2 in HDF5 format (.h5). Each .h5 file contains detailed information on the chemical, experimenal, and synthesis parameters used during the synthesis of a single AutoMOF sample. KW - Automation KW - Procedure KW - Synthesis KW - Traceability PY - 2024 DO - https://doi.org/10.5281/zenodo.11236074 PB - Zenodo CY - Geneva AN - OPUS4-60611 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Smales, Glen Jacob A1 - Pauw, Brian Richard T1 - DACHS/MOFs/AutoMOFs_3/Synthesis N2 - The DACHS (Database for Automation, Characterization and Holistic Synthesis) project aims to create completely traceable experimental data, covering syntheses, measurements, analyses, and interpretations. DACHS_MOFs focuses on the synthesis and characterisation of metal-organic frameworks, across multiple, automation-assisted experimental series (AutoMOFs), with the overall goal of producing reproducible MOF samples through tracking of the synthesis parameters. DACHS_MOFs is simultaneously used to test the DACHS principles. This upload contain synthesis data from AutoMOFs_3 in HDF5 format (.h5). Each .h5 file contains detailed information on the chemical, experimenal, and synthesis parameters used during the synthesis of a single AutoMOF sample. KW - Synthesis KW - Automation KW - Traceability KW - Procedure PY - 2024 DO - https://doi.org/10.5281/zenodo.11237815 PB - Zenodo CY - Geneva AN - OPUS4-60633 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -