TY - CONF A1 - Jakubowski, Norbert T1 - Einführung in die anorganische Massenspektroskopie T2 - 46. Jahrestagung der Deutschen Gesellschaft für Massenspektrometrie CY - Berlin, Germany DA - 2013-03-10 PY - 2013 AN - OPUS4-28032 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Novel challenges for elemental analysis T2 - Bruker European Sales meeting CY - Berlin, Germany DA - 2012-04-25 PY - 2012 AN - OPUS4-25950 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Development of ICP-MS based methods for label free detection of single cells T2 - European Winter Conference on Plasma Spectrochemistry CY - Kraków, Poland DA - 2013-02-09 PY - 2013 AN - OPUS4-27891 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Short Course: ICP-MS with Sector Field Devices T2 - 2012 Winter Conference on Plasma Spectrochemistry CY - Tucson, AZ, USA DA - 2012-01-09 PY - 2012 AN - OPUS4-25367 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Thermo Fisher Scientific Award in Plasma Spectrochemistry T2 - 2012 Winter Conference on Plasma Spectrochemistry CY - Tucson, AZ, USA DA - 2012-01-09 PY - 2012 AN - OPUS4-25368 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Polatajko, A. A1 - Feldmann, I. A1 - Hayen, H. A1 - Jakubowski, Norbert T1 - Combined application of a laser ablation-ICP-MS assay for screening and ESI-FTICR-MS for identification of a Cd-binding protein in Spinacia oleracea L. after exposure to Cd N2 - We have studied the binding of the toxic element Cd to plant proteins and have used for this purpose spinach (Spinacia oleracea L.) plants treated with 50 µM Cd(II) as a model system. Laser ablation ICP-MS has been applied for the screening of Cd-binding proteins after separation by native anodal polyacrylamide gel electrophoresis (AN-PAGE) and electroblotting onto membranes. The main Cd-carrying protein band was isolated and investigated by nano-electrospray ionization–Fourier transform ion cyclotron resonance (FTICR) mass spectrometry after tryptic digestion. By this procedure, the main Cd-binding protein was identified as ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO). The latter enzyme has been discussed in the literature to be affected in its activity by oxidative stress induced by Cd. However, in this paper it is demonstrated for the first time that RuBisCO directly binds Cd and thus may be directly altered by this toxic element. A commercially available protein standard was used to verify direct binding of Cd(II) to the protein, even without metabolisation. The resulting metal–protein complex was shown to be stable enough to survive AN-PAGE separation and electroblotting. By the use of size exclusion chromatography coupled with ICP-MS it was demonstrated that the RuBisCO protein standard shows similar metal binding properties to Cd. Furthermore, essential elements such as Mn(II), Fe(II) and Cu(II), which are known to possibly replace the RuBisCO activator Mg(II), were investigated in addition to Zn(II). Again, similar binding properties in comparison to the plant protein were observed. PY - 2011 DO - https://doi.org/10.1039/c1mt00051a SN - 1756-5901 SN - 1756-591X VL - 3 IS - 10 SP - 1001 EP - 1008 PB - RSC Publ. CY - Cambridge AN - OPUS4-24963 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Giesen, Charlotte A1 - Moreno-Gordaliza, E. A1 - Esteban-Fernández, D. A1 - Lehmann, K. A1 - Canas, B. A1 - Tejedor, A. A1 - Scheler, Ch. A1 - Linscheid, M. A1 - Gómez-Gómez, M. M. A1 - Lázaro-Fernández, A. T1 - Interaction of metals with biomolecules: do we have the proper tools? T2 - "Speciation Seminar" Congress Centre CY - Montpellier, France DA - 2012-05-29 PY - 2012 AN - OPUS4-27353 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Müller, Larissa A1 - Giesen, Charlotte A1 - Hösl, Simone A1 - Techritz, Sandra A1 - Roos, Albrecht A1 - Scheler, Ch. T1 - LA-ICP-MS an new tool for development of methods for imaging of biological and clinical samples T2 - Projektbesprechung Metallproteins CY - Aberdeen, Scotland DA - 2012-11-14 PY - 2012 N1 - Geburtsname von Müller, Larissa: Wäntig, L. - Birth name of Müller, Larissa: Wäntig, L. N1 - Geburtsname von Hösl, Simone: Hardt, S. - Birth name of Hösl, Simone: Hardt, S. AN - OPUS4-27354 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Müller, Larissa A1 - Jakubowski, Norbert A1 - Hösl, Simone A1 - Scheler, C. A1 - Roos, P.H. A1 - Linscheid, M.W. T1 - Comparison of different chelates for lanthanide labeling of antibodies and application in a Western blot immunoassay combined with detection by laser ablation (LA-)ICP-MS N2 - We have developed lanthanide labeling strategies for antibodies to adapt conventional biochemical workflows like Western blot immunoassays for detection by laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) analysis with a special interest to apply the multi-element capabilities of ICP-MS for the design of multiplexed immunoassays. In this paper the lanthanide labeling of antibodies with MeCAT was investigated and the reaction conditions were optimized for application in a Western blot immunoassay analyzed by LA-ICP-MS. Furthermore, the MeCAT labeling strategy was compared with two other commercially available labeling reagents, MAXPAR™ and SCN-DOTA. As a proof-of-principle experiment chemically induced alterations of cytochrome P450 protein expression were investigated and the suitability of the differentially labeled antibodies for Western blot immunoassays of a complex liver microsomal protein fraction was tested. Limits of detection (LODs) in the lower fmol range were reached in the Western blot application using MeCAT and MAXPAR™ as element labeling reagents, whereas even sub-fmol LODs can be achieved in a dot blot experiment for the pure antibodies. PY - 2012 DO - https://doi.org/10.1039/c2ja30068k SN - 0267-9477 SN - 1364-5544 N1 - Geburtsname von Müller, Larissa: Wäntig, L. - Birth name of Müller, Larissa: Wäntig, L. N1 - Geburtsname von Hösl, Simone: Hardt, S. - Birth name of Hösl, Simone: Hardt, S. VL - 27 IS - 8 SP - 1311 EP - 1320 PB - Royal Society of Chemistry CY - London AN - OPUS4-26256 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Richter, Janine A1 - Fettig, Ina A1 - Piechotta, Christian A1 - Philipp, Rosemarie A1 - Jakubowski, Norbert T1 - Tributylzinn in Gesamtwasserproben - Entwicklung eines Referenzverfahrens für die EU-Wasserrahmenrichtlinie PY - 2013 SN - 0016-3538 IS - 9 SP - 2 EP - 4 PB - GIT-Verlag CY - Darmstadt AN - OPUS4-29040 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Müller, Larissa A1 - Techritz, Sandra A1 - Jakubowski, Norbert A1 - Roos, P.H. T1 - A multi-parametric microarray for protein profiling: simultaneous analysis of 8 different cytochromes via differentially element tagged antibodies and laser ablation ICP-MS N2 - The paper presents a new multi-parametric protein microarray embracing the multi-analyte capabilities of laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS). The combination of high throughput reverse phase protein microarrays with element tagged antibodies and LA-ICP-MS makes it possible to detect and quantify many proteins or biomarkers in multiple samples simultaneously. A proof of concept experiment is performed for the analysis of cytochromes particularly of cytochrome P450 enzymes, which play an important role in the metabolism of xenobiotics such as toxicants and drugs. With the aid of the LA-ICP-MS based multi-parametric reverse phase protein microarray it was possible to analyse 8 cytochromes in 14 different proteomes in one run. The methodology shows excellent detection limits in the lower amol range and a very good linearity of R² ≥ 0.9996 which is a prerequisite for the development of further quantification strategies. KW - Multi-parametric KW - Multiplexing KW - Microarray KW - Immunoassay KW - LA-ICP-MS KW - Cytochrome P450 PY - 2013 DO - https://doi.org/10.1039/c3an00468f SN - 0003-2654 SN - 1364-5528 VL - 138 IS - 21 SP - 6309 EP - 6315 PB - Royal Society of Chemistry CY - Cambridge AN - OPUS4-29275 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - The Role of Modern Plasma-based Spectroscopies for Development and Characterization of Reference Materials T2 - Winter Conference on Plasma Spectrochemistry CY - Fort Myers, FL, USA DA - 2010-01-04 PY - 2010 AN - OPUS4-20838 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Roos, P.H. A1 - Jakubowski, Norbert T1 - Methods for the discovery of low-abundance biomarkers for urinary bladder cancer in biological fluids N2 - For the study of bladder cancer and the identification of respective tumor markers, blood and, in particular, urine constitute suitable sources of biological material, while both harboring their specific challenges for analytics concerning low-abundance biomarkers. Dissolved proteins and nucleic acids as well as cells and cell-bound molecules can be the analytes. In urine, exfoliated bladder tumor cells have to be identified and in blood, circulating tumor cells have to be detected among huge amounts of other cells. For the detection of both low-abundance cells and molecules, their specific enrichment prior to analysis is advantageous or even necessary. Adapted methods for the analysis of proteomes and subproteomes by 2D-gel electrophoresis, multidimensional chromatography and antibody arrays are discussed. Analysis of nucleic acid-based markers exploits the high amplification power of PCR and modified PCR combined with previous (subtransciptomes) or subsequent (microarray) enrichment to sensitively and specifically detect markers. DNA mutations, DNA-methylation status and apoptotic DNA fragments, as well as levels of ribonucleic acids including microRNAs, can be analyzed by means of these methods. Finally, the challenge of identifying circulating tumor cells and assigning them to their original tissue is critically discussed. PY - 2010 DO - https://doi.org/10.4155/BIO.09.174 SN - 1757-6180 VL - 2 IS - 2 SP - 295 EP - 309 PB - Future Science Group CY - London AN - OPUS4-20981 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Nießner, R. A1 - Broekaert, J.A. A1 - Bron, M. A1 - Einax, J. A1 - Emons, H. A1 - Haisch, C. A1 - Huber, C. A1 - Jakubowski, Norbert A1 - Knopp, D. A1 - Popp, J. A1 - Schäferling, M. T1 - Analytische Chemie 2008/2009 PY - 2010 DO - https://doi.org/10.1002/nadc.201063123 SN - 1439-9598 SN - 1521-3854 VL - 58 IS - 3 SP - 223 EP - 235 PB - Wiley-VCH Verl. CY - Weinheim AN - OPUS4-21177 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Heritage of Prof. Dr. Ing. Klaus Gustav Heumann: Selected Highlights T2 - 2010 Winter Conference CY - Fort Myers, FL, USA DA - 2010-01-04 PY - 2010 AN - OPUS4-21161 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Jakubowski, Norbert A1 - Prohaska, T. A1 - Roos, P.H. ED - Beauchemin, D. ED - Matthews, D. T1 - Polyatomic ions with double-focusing magnet sector mass spectrometers KW - ICP-MS KW - Sektorfeldgeräte PY - 2010 SN - 978-0-08-043804-7 VL - 5 SP - 132 EP - 150 PB - Elsevier CY - Oxford, UK AN - OPUS4-22237 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Roos, P.H. A1 - Jakubowski, Norbert T1 - Cytochromes - fascinating molecular machines N2 - A huge number of functions and reactions can be performed by proteins merely based on their amino acids and their spatial arrangement which results in a specific geometric and electronic environment. The diversity and efficiency of functions, however, can be increased by protein-bound cofactors which fulfil their task in close interaction with the surrounding amino acid side chains. Among these cofactors, metals play an important role. They can be bound to proteins directly via specific amino acids such as cysteine and histidine, for example in zinc finger proteins or in iron sulfur cluster proteins. Another possibility is their integration into the 3D-structure of a protein via a prosthetic group. Porphyrine or porphyrine-like molecules with copper or iron as central bound metal ions constitute important structures in this respect. PY - 2011 DO - https://doi.org/10.1039/c1mt90012a SN - 1756-5901 SN - 1756-591X VL - 3 SP - 316 EP - 318 PB - RSC Publ. CY - Cambridge AN - OPUS4-23830 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Neue Anwendungen der anorganischen Massenspektrometrie in den Lebens- und Materialwissenschaften T2 - Eingeladener Vortrag, Fakultätskolloquium, Technische Universität Bergakademie Freiberg CY - Freiberg, Germany DA - 2011-02-15 PY - 2011 AN - OPUS4-23809 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Tempez, A. A1 - Chapon, P. A1 - Bordel, N. A1 - Pisonero, J. A1 - Lobo, L. T1 - A new Glow Discharge Time of Fligh Mass Spectrometer for Bulk Analysis and Depth Profiling T2 - PITTCON 2010, eingeladener Vortrag CY - Atlanta, GA, USA DA - 2011-03-13 PY - 2011 AN - OPUS4-23810 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Moreno-Gordaliza, E. A1 - Esteban-Fernández, D. A1 - Giesen, Charlotte A1 - Lehmann, K. A1 - Lázaro, A. A1 - Tejedor, A. A1 - Scheler, C. A1 - Canas, B. A1 - Jakubowski, Norbert A1 - Linscheid, M.W. A1 - Gómez-Gómez, M.M. T1 - LA-ICP-MS and nHPLC-ESI-LTQ-FT-MS/MS for the analysis of cisplatin-protein complexes separated by two dimensional gle elctrophoresis in biological samples N2 - A method for the analysis of Pt–protein complexes in biological samples, previously subjected to cisplatin treatment, has been developed. Proteins were separated by gel electrophoresis, and those bound to Pt were detected with high sensitivity by LA-ICP-(SF)-MS. Pt-containing spots were in-gel digested with trypsin, and the peptides produced identified using nHPLC-ESI-LTQ-FT-MS/MS. The influence of protein separation conditions, staining and gel processing prior to laser ablation on Pt–protein bonds preservation have been evaluated using standard proteins incubated with cisplatin. 2-DE separation under non-reducing conditions followed by either Coomassie blue brilliant or silver staining is appropriate for Pt–protein complexes, achieving a good separating resolution of the proteins in biological samples. Direct LA-ICP-MS analysis of glycerol-treated dried gels for Pt–protein monitoring resulted in better sensitivity, more reliable relative Pt signals and a simpler and less time-consuming approach compared to the analysis of blotted membranes. Ablation of gels allowed tackling protein identification of Pt-spots in the remaining non-ablated material in the gel, making it unnecessary to run several gels in parallel for separate Pt detection and protein identification. By using this approach, Pt coordinated to proteins, such as α-2-macroglobulin, transferrin, albumin or hemoglobin, was detected in the serum from a rat treated in vivo with cisplatin after nrSDS-PAGE separation. Furthermore, the first complete LA-ICP-MS metalloprotein contour map in a 2-DE gel has been produced, in this case for the detection of Pt–protein complexes in renal proximal tubule epithelial cells (RPTECs) incubated with cisplatin. Several proteins were identified in those spots containing Pt, which may have a connection with the drug-induced nephrotoxicity mainly affecting this cell type in the kidney. PY - 2012 DO - https://doi.org/10.1039/c2ja30016h SN - 0267-9477 SN - 1364-5544 VL - 27 IS - 9 SP - 1474 EP - 1483 PB - Royal Society of Chemistry CY - London AN - OPUS4-26562 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Moreno-Gordaliza, E. A1 - Esteban-Fernández, D. A1 - Giesen, Ch. A1 - Lehmann, K. A1 - Lázaro-Fernández, A. A1 - Canas, B. A1 - Tejedor, A. A1 - Scheler, Ch. A1 - Linscheid, M. A1 - Gómez-Gómez, M. T1 - LA-ICP-MS for the detection of (semi)metallo-proteins in biological samples after PAGE / 2-DE separations T2 - Vortrag bei Prof. Ogra, University of Pharmaceutical CY - Tokyo, Japan DA - 2013-10-01 PY - 2013 AN - OPUS4-29198 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Moreno-Gordaliza, E. A1 - Esteban-Fernández, D. A1 - Giesen, Ch. A1 - Lehmann, K. A1 - Lázaro-Fernández, A. A1 - Canas, B. A1 - Tejedor, A. A1 - Scheler, Ch. A1 - Linscheid, M. A1 - Gómez-Gómez, M. T1 - LA-ICP-MS for the detection of (semi)metallo-proteins in biological samples after PAGE / 2-DE separations T2 - Vortrag bei Prof. Zuruta, Chuo University CY - Tokyo, Japan DA - 2013-10-03 PY - 2013 AN - OPUS4-29201 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Development of ICP-MS based methods for label free detection of (semi)metals T2 - Vortrag bei der Discussion Group Plasma Meeting im Institut of Technology CY - Tokyo, Japan DA - 2013-10-04 PY - 2013 AN - OPUS4-29204 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Kipphardt, Heinrich A1 - Richter, Silke A1 - Dette, Angelika A1 - Recknagel, Sebastian A1 - Müller, Larissa T1 - Direct solid analysis ba LA- and ETV-ICP-OES/MS T2 - 4th Asia-Pacific Winter Conference on Spectrochemical Analysis CY - Beijing, China DA - 2010-12-01 PY - 2010 N1 - Geburtsname von Müller, Larissa: Wäntig, L. - Birth name of Müller, Larissa: Wäntig, L. AN - OPUS4-23239 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Kipphardt, Heinrich A1 - Richter, Silke A1 - Dette, Angelika A1 - Recknagel, Sebastian A1 - Müller, Larissa T1 - Direct solid analysis ba LA- and ETV-ICP-OES/MS T2 - FACSS Conference 2010 CY - Gaithersburg, MD, USA DA - 2010-10-22 PY - 2010 N1 - Geburtsname von Müller, Larissa: Wäntig, L. - Birth name of Müller, Larissa: Wäntig, L. AN - OPUS4-23237 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Müller, Larissa A1 - Panne, Ulrich A1 - Roos, P.H. A1 - Drescher, Daniela A1 - Traub, Heike A1 - Kneipp, Janina T1 - Future challenges for ICP-MS T2 - Symposium - 100 Jahre Massenspektrometrie CY - Vienna, Austria DA - 2013-11-26 PY - 2013 AN - OPUS4-29693 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Lindner, Uwe A1 - Lingott, Jana A1 - Panne, Ulrich A1 - Richter, Silke T1 - Speciation and imaging of Gd containing MRI contrast agents in environmental samples by ICP-MS T2 - European Winter Conference on Plasma Spectrochemistry (EWCPS 2015) CY - Münster, Germany DA - 2015-02-22 PY - 2015 AN - OPUS4-32821 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Müller, Larissa A1 - Traub, Heike A1 - Esteban-Fernández, Diego A1 - Panne, Ulrich A1 - Herrmann, Antje A1 - Schellenberger, E. A1 - Kneipp, Janina T1 - Bio- and immuno-imaging by use of laser ablation ICP-MS N2 - Imuno-histochemical staining (IHC) of cancer biomarker on tissue sections is one of the most important analytical techniques for cancer diagnosis although standardization and quality management is tedious and differ significantly from clinic to clinic. Combining established IHC staining strategies with modern quantitative methods would increase it`s potential. We used element mass spectrometry (ICP-MS) and a new ink-jet printed internal standardization approach in combination with IHC staining. The printing strategy was utilized to improve elemental image resolution and reproducibility of paraffin embedded breast cancer tissue sections in laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) after conventional IHC staining as a model system to investigate the new capabilities of this technique. T2 - European Winter Conference on Plasma Spectrochemistry 2016 CY - Tucson, Arizona, USA DA - 10.01.2016 KW - Laser Ablation KW - ICP-MS KW - Bio-Imaging PY - 2016 AN - OPUS4-36492 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Müller, Larissa A1 - Panne, Ulrich A1 - Roos, P.H. A1 - Drescher, Daniela A1 - Traub, Heike A1 - Kneipp, Janina T1 - Future challenges for ICP-MS T2 - Invited Lecture Tour in Tokyo, Vortrag bei der Firma Agilent CY - Tokyo, Japan DA - 2013-10-01 PY - 2013 AN - OPUS4-29199 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Lindner, Uwe A1 - Panne, Ulrich A1 - Chinthalapati, Siva Kesava Raju T1 - Speciation of gadolinium based MRI contrast agents in environmental water samples using hydrophilic interaction chromatography coupled to inductively coupled plasma mass spectrometry T2 - Third International Symposium on Metallomics CY - Münster, Germany DA - 2011-06-15 PY - 2011 AN - OPUS4-24106 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Cruz-Alonso, M. A1 - Fernandez, B. A1 - Álvarez, L. A1 - González-Iglesias, H. A1 - Traub, Heike A1 - Jakubowski, Norbert A1 - Pereiro, R. T1 - Bioimaging of metallothioneins in ocular tissue sections by laser ablation-ICP-MS using bioconjugated gold nanoclusters as specific tags N2 - An immunohistochemical method is described to visualize the distribution of metallothioneins 1/2 (MT 1/2) and metallothionein 3 (MT 3) in human ocular tissue. It is making use of (a) antibodies conjugated to gold nanoclusters (AuNCs) acting as labels, and (b) laser ablation (LA) coupled to inductively coupled plasma – mass spectrometry (ICP-MS).Water-soluble fluorescent AuNCs (with an average size of 2.7 nm) were synthesized and then conjugated to antibody by carbodiimide coupling. The surface of the modified AuNCs was then blocked with hydroxylamine to avoid nonspecific interactions with biological tissue. Immunoassays for MT 1/2 and MT 3 in ocular tissue sections (5 μm thick) from two post mortem human donors were performed. Imaging studies were then performed by fluorescence using confocal microscopy, and LA-ICP-MS was performed in the retina to measure the signal for gold. Signal amplification by the >500 gold atoms in each nanocluster allowed the antigens (MT 1/2 and MT 3) to be imaged by LA-ICP-MS using a laser spot size as small as 4 μm. The image patterns found in retina are in good agreement with those obtained by conventional fluorescence immunohistochemistry which was used as an established reference method. KW - Metal nanoclusters KW - Fluorescence KW - Protein imaging KW - Thin tissue sections KW - Immunohistochemistry KW - Bioconjugation KW - Carbodiimide crosslinking KW - Laser ablation KW - Mass spectrometry PY - 2018 DO - https://doi.org/10.1007/s00604-017-2597-1 VL - 185 IS - 1 SP - 1 EP - 9 PB - Springer AN - OPUS4-44022 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Heritage Lecture N2 - After finishing my diploma thesis in plasma physics in 1981, I dreamt of a future in a research lab to develop novel fusion reactors for energy production or to study universal plasmas and their emission in the cosmos. This dream never became real, however I found my first job in a team to build up a new museum dedicated to “Energy”, and this first part of my career was already finished after a year, because the funding was not extended. So, I found immediately a new job as a young scientist in the institute for analytical sciences (originally ISAS: Institute for Plasmachemistry and Applied Spectroscopy) in 1982 to develop novel plasma ion sources for inorganic mass spectrometry. The first source of interest was based on a glow discharge for direct analysis of conducting solids (technically supported by Finnigan MAT, Bremen). Here I adopted the design of the Grimm type discharge for the first time, which was well known in optical emission spectroscopy, and coupled it to a quadrupole mass analyzer. The advantage of this design was that flat craters are produced by sputtering which made this source very powerful for in-depth analysis of technical layers. This then became the topic of my PhD, which was not originally planned, and I had to learn a lot about surface analysis. However, since the first project was too successful we established a small team (in cooperation with Jose Broekaert - an expert in ICP-OES) which started with the development of our own inductively coupled plasma ion source in 1986 coupled to a quadrupole and in 1989 to a sector field mass spectrometer (funded by the Minister of Science and Technology; again in cooperation with Finnigan MAT). The latter device was launched to the market in 1993 as the Element 1. The second decade of my career was still related to instrumental development but mainly of glow discharge sources. In an EU funded project first an automated glow discharge sector field instrument was developed where the Grimm type geometry was combined with a fast flow concept (in cooperation with Volker Hoffmann at IFW in Dresden). This was done in cooperation with VG (which became later a part of Thermo Fisher Scientific together with Finnigan MAT), so that it is not surprising that this concept for the Element GD. This project was later continued in the third phase of my career, again funded by the EU and in cooperation with the group of Alfredo Sanz-Medel (Rosario Pereiro and Jorge Pisonero), to develop a fast flow, but now rf-powered GD ion source in combination with a time-of-flight mass spectrometer, which was later launched to the market commercially by Horiba Jobin Yvon (France) for in-depth profiling of thin layers even of non-conducting materials. In the first decade of my career I started to study already “analytical chemistry” from the scratch because the instruments developed have been applied now for direct analysis of solid materials, technical layers and environmental samples. In case of environmental applications our ICP-MS (the quadrupole and the sector field instrument) was coupled with separation techniques, so that this period of instrumental development was dominated in the second decade by development of high efficiency sample introduction systems in combination with speciation studies of Pt group elements, arsenic, selenium and phosphorus (in DNA and phosphorylated proteins), Ni and Cr. Additionally, we continued with the analysis of solid ceramic materials (Al2O3, SiC, SiN) and ambient air-born particles. At the end of the second decade we complemented our instrumental pool by a collision and reaction cell instrument in cooperation with Micromass and used this instrument for speciation studies of peptides and proteins and demonstrated that by ICP-HEX-MS quantitative proteomics is feasible. Therefore, we more and more focused in the following years on metalloproteins and published a famous paper on “Metallobiomolecules: The basis of life, the challenge of atomic spectroscopy” (together with Luc Moens and Ryszard Lobinski). For detection of metalloproteins we applied typical workflows of biochemistry and proteomics, for which I had to extend my knowledge about biochemistry and proteomics. As a new analytical tool, we used a homemade laser ablation cell for sample introduction of metalloproteins after their separation by gel electrophoresis and extended this work by applying metal-tagging of antibodies for Western blot assays. For this purpose, proteins were separated in SDS-PAGE and electroblotted onto membranes. Specific detection of proteins even not containing any metal could be performed by laser ablation ICP-MS using the metal tagged antibodies for indirect detection. This research was interrupted in 2009 by a movement from ISAS (where atomic spectroscopy was declining) to BAM (the Federal Institute for Materials Research and Testing, Berlin) where this research direction was fostered. The experience we achieved at ISAS in the previously mentioned projects were now used here at BAM in the fourth decade for materials research and the development of a quantitative elemental microscope with cellular resolution. So, at the end of my career I am trying to apply all my knowledge and expertise to develop analytical methods and to apply multimodal spectroscopies to decipher the construction code of the cellular machinery, which is the most precise and complex machinery I have ever seen. If we were able to understand how this machinery works, we can better diagnose and treat a malfunction in case of the development of a disease. Finally, I can conclude that lifelong learning starts before school but does not end at the end of this lecture. It looks like this heritage lecture will be focused on my career only, but this is not the case because some highlights of my career will be used to illustrate a few universal principles: how to have fun, how to find friends and how this all leads to an increase of joy and joy is the basis of new ideas (which must not always be related to your profession) and novel ideas are essential for a successful and satisfying career. So, this heritage lecture wants to answer the most important question of a life which was dedicated to plasma spectrochemistry: 1) Is it possible - at all - to have fun in this research direction? 2) Can we learn already today what we need tomorrow? 3) How can we still realize our scientific dreams of cutting edge research in times of cutting budgets? Which automatically leads to the next question: 4) Is necessity the mother of invention? All questions will be answered! Controversial discussions (for angry or disappointed colleagues) will be stimulated and my visions of future research (for students and postdocs) and instrumental developments (for manufacturer) will be presented. Finally, conclusions will be drawn by the auditorium (everybody) and thanks will be given to Ramon Barnes (by me) already in advance! T2 - 2018 Winter Conference on Plasma Spectrochemistry CY - Amelia Island, FL, USA DA - 08.01.2018 KW - History of the research work of Norbert Jakubowski KW - Glow Discharge Mass Spectrometry KW - Inductively Coupled Plasma Mass Spectrometry KW - Laser Ablation PY - 2018 AN - OPUS4-44461 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Heritage Lecture N2 - After finishing my diploma thesis in plasma physics in 1981, I dreamt of a future in a research lab to develop novel fusion reactors for energy production or to study universal plasmas and their emission in the cosmos. This dream never became real, however I found my first job in a team to build up a new museum dedicated to “Energy”, and this first part of my career was already finished after a year, because the funding was not extended. So, I found immediately a new job as a young scientist in the institute for analytical sciences (originally ISAS: Institute for Plasmachemistry and Applied Spectroscopy) in 1982 to develop novel plasma ion sources for inorganic mass spectrometry. The first source of interest was based on a glow discharge for direct analysis of conducting solids (technically supported by Finnigan MAT, Bremen). Here I adopted the design of the Grimm type discharge for the first time, which was well known in optical emission spectroscopy, and coupled it to a quadrupole mass analyzer. The advantage of this design was that flat craters are produced by sputtering which made this source very powerful for in-depth analysis of technical layers. This then became the topic of my PhD, which was not originally planned, and I had to learn a lot about surface analysis. However, since the first project was too successful we established a small team (in cooperation with Jose Broekaert - an expert in ICP-OES) which started with the development of our own inductively coupled plasma ion source in 1986 coupled to a quadrupole and in 1989 to a sector field mass spectrometer (funded by the Minister of Science and Technology; again in cooperation with Finnigan MAT). The latter device was launched to the market in 1993 as the Element 1. The second decade of my career was still related to instrumental development but mainly of glow discharge sources. In an EU funded project first an automated glow discharge sector field instrument was developed where the Grimm type geometry was combined with a fast flow concept (in cooperation with Volker Hoffmann at IFW in Dresden). This was done in cooperation with VG (which became later a part of Thermo Fisher Scientific together with Finnigan MAT), so that it is not surprising that this concept for the Element GD. This project was later continued in the third phase of my career, again funded by the EU and in cooperation with the group of Alfredo Sanz-Medel (Rosario Pereiro and Jorge Pisonero), to develop a fast flow, but now rf-powered GD ion source in combination with a time-of-flight mass spectrometer, which was later launched to the market commercially by Horiba Jobin Yvon (France) for in-depth profiling of thin layers even of non-conducting materials. In the first decade of my career I started to study already “analytical chemistry” from the scratch because the instruments developed have been applied now for direct analysis of solid materials, technical layers and environmental samples. In case of environmental applications our ICP-MS (the quadrupole and the sector field instrument) was coupled with separation techniques, so that this period of instrumental development was dominated in the second decade by development of high efficiency sample introduction systems in combination with speciation studies of Pt group elements, arsenic, selenium and phosphorus (in DNA and phosphorylated proteins), Ni and Cr. Additionally, we continued with the analysis of solid ceramic materials (Al2O3, SiC, SiN) and ambient air-born particles. At the end of the second decade we complemented our instrumental pool by a collision and reaction cell instrument in cooperation with Micromass and used this instrument for speciation studies of peptides and proteins and demonstrated that by ICP-HEX-MS quantitative proteomics is feasible. Therefore, we more and more focused in the following years on metalloproteins and published a famous paper on “Metallobiomolecules: The basis of life, the challenge of atomic spectroscopy” (together with Luc Moens and Ryszard Lobinski). For detection of metalloproteins we applied typical workflows of biochemistry and proteomics, for which I had to extend my knowledge about biochemistry and proteomics. As a new analytical tool, we used a homemade laser ablation cell for sample introduction of metalloproteins after their separation by gel electrophoresis and extended this work by applying metal-tagging of antibodies for Western blot assays. For this purpose, proteins were separated in SDS-PAGE and electroblotted onto membranes. Specific detection of proteins even not containing any metal could be performed by laser ablation ICP-MS using the metal tagged antibodies for indirect detection. This research was interrupted in 2009 by a movement from ISAS (where atomic spectroscopy was declining) to BAM (the Federal Institute for Materials Research and Testing, Berlin) where this research direction was fostered. The experience we achieved at ISAS in the previously mentioned projects were now used here at BAM in the fourth decade for materials research and the development of a quantitative elemental microscope with cellular resolution. So, at the end of my career I am trying to apply all my knowledge and expertise to develop analytical methods and to apply multimodal spectroscopies to decipher the construction code of the cellular machinery, which is the most precise and complex machinery I have ever seen. If we were able to understand how this machinery works, we can better diagnose and treat a malfunction in case of the development of a disease. Finally, I can conclude that lifelong learning starts before school but does not end at the end of this lecture. It looks like this heritage lecture will be focused on my career only, but this is not the case because some highlights of my career will be used to illustrate a few universal principles: how to have fun, how to find friends and how this all leads to an increase of joy and joy is the basis of new ideas (which must not always be related to your profession) and novel ideas are essential for a successful and satisfying career. So, this heritage lecture wants to answer the most important question of a life which was dedicated to plasma spectrochemistry: 1) Is it possible - at all - to have fun in this research direction? 2) Can we learn already today what we need tomorrow? 3) How can we still realize our scientific dreams of cutting edge research in times of cutting budgets? Which automatically leads to the next question: 4) Is necessity the mother of invention? All questions will be answered! Controversial discussions (for angry or disappointed colleagues) will be stimulated and my visions of future research (for students and postdocs) and instrumental developments (for manufacturer) will be presented. Finally, conclusions will be drawn by the auditorium (everybody) and thanks will be given to Ramon Barnes (by me) already in advance! T2 - BAM-Doktorandenseminar CY - Berlin, Germany DA - 07.02.2018 KW - History of the research work of Norbert Jakubowski KW - Glow Discharge Mass Spectrometry KW - Inductively Coupled Plasma Mass Spectrometry KW - Laser Ablation PY - 2018 AN - OPUS4-44462 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - López-Serrano Oliver, A. A1 - Peddinghaus, A. A1 - Wittke, D. A1 - Haase, A. A1 - Luch, A. A1 - Grützkau, A. A1 - Baumgart, S. T1 - Quantification of silver nanoparticles at single cell level by mass cytometry N2 - Silver nanoparticles (AgNPs), have a high scientific and commercial impact due to their important antibacterial properties. However, there are serious concerns about their toxicological adverse effects as a consequence of their broad range of applications. Particularly, the impact of AgNPs on cells is not very well understood yet and there is a current demand to develop analytical methodologies providing information about the interaction and distribution of AgNPs at a single cell level. In this research, mass cytometry was used to introduce a new quantitative approach to study the uptake of AgNPs by individual THP-1 macrophages as a cell model system. Here, we show that this methodology provides not only multi-variate phenotypic information of individual cells but enables the quantitative analysis of AgNPs associated to cells in a single measurement by performing an external calibration using AgNPs suspension. Using differentiated THP-1 cells, we monitored and quantified the uptake of 50 nm AgNPs in a time and dose-dependent manner by mass cytometry. 7 to 120 AgNPs per cell (2 to 89 fg Ag/cell) were determined after exposure of differentiated THP-1 cells to low AgNPs concentrations of 0.1 and 1.0 mg L-1, at time points of 4 and 24 h. The results were validated by mass cytometric analysis of digested cells working as a conventional inductively coupled plasma mass spectrometry, ICP-MS. This study demonstrates the power of single cell analysis by mass cytometry even for low doses experiments as a new analytical tool for hitherto unaddressed questions in nanotoxicology. T2 - 1st German Mass Cytometry User Forum CY - Berlin, Germany DA - 01.02.2018 KW - Silver nanoparticles KW - Single cell KW - Mass cytometry PY - 2018 AN - OPUS4-44408 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - López-Serrano Oliver, Ana A1 - Haase, A. A1 - Peddinghaus, A. A1 - Wittke, D. A1 - Luch, A. A1 - Grützkau, A. A1 - Baumgart, S. T1 - Quantification of silver nanoparticles at single cell level by mass cytometry N2 - Silver nanoparticles (AgNPs), have a high scientific and commercial impact due to their important antibacterial properties. However, there are serious concerns about their toxicological adverse effects as a consequence of their broad range of applications. Particularly, the impact of AgNPs on cells is not very well understood yet and there is a current demand to develop analytical methodologies providing information about the interaction and distribution of AgNPs at a single cell level. In this research, mass cytometry was used to introduce a new quantitative approach to study the uptake of AgNPs by individual THP-1 macrophages as a cell model system. Here, we show that this methodology provides not only multi-variate phenotypic information of individual cells but enables the quantitative analysis of AgNPs associated to cells in a single measurement by performing an external calibration using AgNPs suspension. Using differentiated THP-1 cells, we monitored and quantified the uptake of 50 nm AgNPs in a time and dose-dependent manner by mass cytometry. 7 to 120 AgNPs per cell (2 to 89 fg Ag/cell) were determined after exposure of differentiated THP-1 cells to low AgNPs concentrations of 0.1 and 1.0 mg L-1, at time points of 4 and 24 h. The results were validated by mass cytometric analysis of digested cells working as a conventional inductively coupled plasma mass spectrometry, ICP-MS. This study demonstrates the power of single cell analysis by mass cytometry even for low doses experiments as a new analytical tool for hitherto unaddressed questions in nanotoxicology. T2 - BAM-BfR Seminar CY - Berlin, Germany DA - 15.02.2018 KW - Silver nanoparticles KW - Single cell KW - Mass cytometry PY - 2018 AN - OPUS4-44410 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Laux, P. A1 - Tentschert, J. A1 - Riebeling, Ch. A1 - Braeuning, A. A1 - Creutzenberg, O. A1 - Epp, A. A1 - Fessard, V. A1 - Haas, K.-H. A1 - Haase, A. A1 - Hund-Rinke, K. A1 - Jakubowski, Norbert A1 - Kearns, P. A1 - Lampen, A. A1 - Rauscher, H. A1 - Schoonjans, R. A1 - Störmer, A. A1 - Thielmann, A. A1 - Mühle, U. A1 - Luch, A. T1 - Nanomaterials: certain aspects of application, risk assessment and risk communication N2 - Development and market introduction of new nanomaterials trigger the need for an adequate risk assessment of such products alongside suitable risk communication measures. Current application of classical and new nanomaterials is analyzed in context of regulatory requirements and standardization for chemicals, food and consumer products. The challenges of nanomaterial characterization as the main bottleneck of risk assessment and regulation are presented. In some areas, e.g., quantification of nanomaterials within complex matrices, the establishment and adaptation of analytical techniques such as laser ablation inductively coupled plasma mass spectrometry and others are potentially suited to meet the requirements. As an example, we here provide an approach for the reliable characterization of human exposure to nanomaterials resulting from food packaging. Furthermore, results of nanomaterial toxicity and ecotoxicity testing are discussed, with concluding key criteria such as solubility and fiber rigidity as important parameters to be considered in material development and regulation. Although an analysis of the public opinion has revealed a distinguished rating depending on the particular field of application, a rather positive perception of nanotechnology could be ascertained for the German public in general. An improvement of material characterization in both toxicological testing as well as end-product control was concluded as being the main obstacle to ensure not only safe use of materials, but also wide acceptance of this and any novel technology in the general public. KW - Nanomaterials KW - Toxicity KW - Ecotoxicity KW - Standardization KW - Exposure PY - 2018 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-441096 DO - https://doi.org/10.1007/s00204-017-2144-1 VL - 92 IS - 1 SP - 121 EP - 141 PB - Springer AN - OPUS4-44109 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Meyer, S. A1 - López-Serrano, Ana A1 - Mitze, H. A1 - Jakubowski, Norbert A1 - Schwerdtle, T. T1 - Single-cell analysis by ICP-MS/MS as a fast tool for cellular bioavailability studies of arsenite N2 - Single-cell inductively coupled plasma mass spectrometry (SC-ICP-MS) has become a powerful and fast tool to evaluate the elemental composition at a single-cell level. In this study, the cellular bioavailability of arsenite (incubation of 25 and 50 μM for 0-48 h) has been successfully assessed by SC-ICP-MS/MS for the first time directly after re-suspending the cells in water. This procedure avoids the normally arising cell membrane permeabilization caused by cell fixation methods (e.g. methanol fixation). The reliability and feasibility of this SC-ICP-MS/MS approach with a limit of detection of 0.35 fg per cell was validated by conventional bulk ICP-MS/MS analysis after cell digestion and parallel measurement of sulfur and phosphorus. KW - Single-cell analysis KW - ICP-MS/MS KW - Arsenite PY - 2018 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-441105 DO - https://doi.org/10.1039/c7mt00285h SN - 1756-5901 VL - 10 IS - 1 SP - 73 EP - 76 PB - RSC Publ. CY - Cambridge AN - OPUS4-44110 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Müller, L. A1 - Wanka, Antje T1 - Development of immuno-assays and metal-staining techniques for bioimaging of cells and tissues using LA-ICP-MS N2 - We are using LA-ICP-MS to quantify metals in biological cells and thin cuts of tissues from varies organs. Different applications will be presented to demonstrate the state of the art of bioimaging to visualize the elemental distribution pattern in soft bio-materials (tissue, single cells) of metals, metal containing stains and metal-tagged antibodies. For this purpose, different strategies for metal tagging will be presented and will be compared in terms of analytical figures of merit. First applications for detection of biomarkers in animal and human tissue samples will be presented. In a first example, we have applied LA-ICP-MS to visualize the local distribution of proteins, which are used as bio-markers for neurodegenerative diseases. For this purpose, brain tissues from mice experiments have been stained by metal-tagged antibodies. House-keeping proteins have been investigated as internal cellular standards. Additionally, ink-jet printing of metal doped inks onto the surface of tissue samples has been applied for drift corrections and quantification. Validation of our results are achieved in comparison to immune-histochemical staining and optical microscopy. In a second example, we used specific metal-tagged antibodies for detection of biomarker specific for prostate cancer. For this purpose, micro tissue arrays are incubated with metal-tagged antibodies for bioimaging of samples from many patients using simultaneous detection of all relevant biomarkers and their tags. For improvement of sensitivity in the next example application nanoparticle tagged antibodies for detection of metallothionines in eye lens tissue samples will be discussed. Recently we have used our tagging and staining strategies to determine the cell cycle of single cells, which is of future interest for toxicological studies. Finally, future trends in elemental microscopy and mass cytometry imaging will be discussed. T2 - Workshop on Laser Bioimaging Mass Spectrometry CY - Münster, Germany DA - 24.05.2018 KW - Single cell analysis KW - LA-ICP-MS KW - Immuno-Assays PY - 2018 AN - OPUS4-45160 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hoesl, Simone A1 - Neumann, B. A1 - Techritz, Sandra A1 - Sauter, G. A1 - Simon, R. A1 - Schlüter, H. A1 - Linscheid, M. W. A1 - Theruing, F. A1 - Müller, Larissa A1 - Jakubowski, Norbert T1 - Internal standardization of LA-ICP-MS immunoimaging via printing of universal metal spiked inks onto tissue sections N2 - Formalin-fixed paraffin-embedded (FFPE) specimen from biopsy materials are a widespread sample format for pathologists and medical researchers. Pathologists are archiving vast numbers of FFPE samples which can be stored for decades. Conventional immunohistochemical staining (IHC) of biomarkers on FFPE tissue sections is one of the most important analytical techniques for cancer diagnosis and pathology in general. However standardization for IHC samples and quality management is tedious and differs significantly from clinic to clinic. Combining established IHC staining strategies with modern mass spectrometry mediated methods would increase it`s potential and enable access of large FFPE archives for multiplexed quantitation purposes. In this work element mass spectrometry and a new ink-jet printed internal standardization approach was successfully combined with IHC staining to facilitate quantitative multiplex assays for archived FFPE samples. The printing strategy improves elemental image resolution and reproducibility of paraffin embedded breast cancer tissue sections in laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) using conventional IHC staining as a model system to investigate the new capabilities of this technique. For the internal standardization we applied a conventional CD-ink-jet printer to print a metal spiked ink onto the top of thin layer tissue sections with constant density. Printing was carried out in a direct comparison to an iodination of the tissue section as previously described as an alternative standardization method. The use of the printed internal standard allowed correction of the fluctuation during the laser ablation process and compensated instrumental drift effects. Mediated by the ink correction approach we achieved better signal-to-background-ratios (SBR) of 74 and better spatial resolution of 30 µm compared to iodination (SBR=23). This improved performance was demonstrated on tumorous areas in FFPE breast cancer tissue sections and allowing detection of Her-2 in tumorous areas of this tissue with significantly improved contrast. KW - Internal standardization KW - LA-ICP-MS KW - Immuno imaging PY - 2016 DO - https://doi.org/10.1039/c5ja00409h SN - 0267-9477 SN - 1364-5544 VL - 31 IS - 3 SP - 801 EP - 808 AN - OPUS4-35711 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Esteban-Fernández, Diego A1 - Traub, Heike A1 - Hutchinson, R. A1 - Walkins, J. A1 - Summerfield, L. T1 - High resolution laser ablation NWR-Image system for single cell imaging T2 - 2016 Winter Conference on Plasma Spectrochemistry CY - Tucson, Arizona, USA DA - 2016-01-10 PY - 2016 AN - OPUS4-35285 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Al-Terkawi, Abdal-Azim A1 - Özelci, E. A1 - Monks, M.-J. A1 - Venkatareddy, N. L. A1 - Khadem, S. M. J. A1 - Chewle, S. A1 - Mekonnen, T. F. T1 - Isotopic Fingerprinting Autenticity control, provenance testing and fraud detection using mass spectrometry T2 - Humboldt-Universität zu Berlin CY - Humboldt-Universität zu Berlin, Germany DA - 2015-10-20 PY - 2015 AN - OPUS4-35286 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CHAP A1 - Rottmann, L. A1 - Jakubowski, Norbert A1 - Konegger-Kappel, S. A1 - Hanousek, O. A1 - Prohaska, T. ED - Prohaska, T. ED - Irrgeher, J. ED - Zitek, A. ED - Jakubowski, Norbert T1 - Technical background N2 - The major components of sector field instruments can be listed as follows and will be described in more detail in the following chapter. (Specific details for the different types of instruments will be given in the corresponding instrumental sections in Chapters 11-17.) The general principle of all mass spectrometers follows ionisation after sample introduction, Separation of the ions according to their mlz ratio and final detection at the detection unit. The transport and Separation of ions follow the principles of ion optics. PY - 2015 SN - 978-1-84973-392-2 SN - 978-1-84973-540-7 SN - 2044-253X N1 - Serientitel: New developments in mass spectrometry – Series title: New developments in mass spectrometry Das Belegexemplar liegt nur beim Autor komplett vor! VL - 3 SP - Chapter 4, 44 EP - 96 CY - Cambridge, UK AN - OPUS4-32983 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - Versatility of LA-ICP-MS as a tool for bio-imaging T2 - CCQM Workshop CY - Teddington, London, UK DA - 2015-11-18 PY - 2015 AN - OPUS4-35012 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert T1 - ICP-MS with Sector Field Devices N2 - This lecture is an introduction to ICP-MS with a double focusing magnetic sector mass analyzer. It offers fundamental background, a thorough discussion of analytical features, and state of the art information on applications. Different types of double focusing instruments also are considered. Specific topics include fundamental aspects of ICP-MS (physical properties of a double focusing instrument, operational characteristics in comparison with quadrupole instruments); analytical characteristics (spectral and non-spectral interferences, figures of merit in low and high resolution modes, blanks and memory effects, HPLC and GC interfaces), and applications (industrial including ultra-pure reagents and alloys, environmental, geological, and biomedical materials). T2 - Winter Conference on Plasma Spectrochemistry CY - Tucson, Arizona, USA DA - 10.01.2016 KW - High-resolution ICP-MS KW - Figures of merit KW - Interfaces KW - Applications KW - Ultra-trace analysis PY - 2016 AN - OPUS4-37148 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Büchner, T. A1 - Drescher, D. A1 - Merk, V. A1 - Traub, Heike A1 - Guttmann, P. A1 - Werner, St. A1 - Jakubowski, Norbert A1 - Schneider, G. A1 - Kneipp, J. T1 - Biomolecular environment, quantification, and intracellular interaction of multifunctional magnetic SERS nanoprobes N2 - Multifunctional composite nanoprobes consisting of iron oxide nanoparticles linked to silver and gold nanoparticles, Ag–Magnetite and Au–Magnetite, respectively, were introduced by endocytic uptake into cultured fibroblast cells. The cells containing the non-toxic nanoprobes were shown to be displaceable in an external magnetic field and can be manipulated in microfluidic channels. The distribution of the composite nanostructures that are contained in the endosomal system is discussed on the basis of surfaceenhanced Raman scattering (SERS) mapping, quantitative laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) micromapping, and cryo soft X-ray tomography (cryo soft-XRT). Cryo soft-XRT of intact, vitrified cells reveals that the composite nanoprobes form intra-endosomal aggregates. The nanoprobes provide SERS signals from the biomolecular composition of their surface in the endosomal environment. The SERS data indicate the high stability of the nanoprobes and of their plasmonic properties in the harsh environment of endosomes and lysosomes. The spectra point at the molecular composition at the surface of the Ag–Magnetite and Au–Magnetite nanostructures that is very similar to that of other Composite structures, but different from the composition of pure silver and gold SERS nanoprobes used for intracellular investigations. As shown by the LA-ICP-MS data, the uptake efficiency of the magnetite composites is approximately two to three times higher than that of the pure gold and silver nanoparticles. KW - Nanoparticles KW - SERS KW - Cell KW - LA-ICP-MS KW - X-ray tomography PY - 2016 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-371811 DO - https://doi.org/10.1039/c6an00890a SN - 0003-2654 VL - 141 IS - 17 SP - 5096 EP - 5106 PB - Royal Society of Chemistry CY - Cambridge, UK AN - OPUS4-37181 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Hsiao, I.-L. A1 - Bierkandt, Frank A1 - Reichardt, Ph. A1 - Luch, A. A1 - Huang, Y.-J. A1 - Jakubowski, Norbert A1 - Tentschert, J. A1 - Haase, A. T1 - Quantification and visualization of cellular uptake of TiO2 and Ag nanoparticles: comparison of different ICP-MS techniques N2 - Safety assessment of nanoparticles (NPs) requires techniques that are suitable to quantify tissue and cellular uptake of NPs. The most commonly applied techniques for this purpose are based on inductively coupled plasma mass spectrometry (ICP-MS). Here we apply and compare three different ICP-MS methods to investigate the cellular uptake of TiO2 (diameter 7 or 20 nm, respectively) and Ag (diameter 50 or 75 nm, respectively) NPs into differentiated mouse neuroblastoma cells (Neuro-2a cells). Cells were incubated with different amounts of the NPs. Thereafter they were either directly analyzed by laser ablation ICP-MS (LA-ICP-MS) or were lysed and lysates were analyzed by ICP-MS and by single particle ICP-MS (SP-ICP-MS). KW - Nanoparticles KW - Single particle ICP-MS KW - Laser ablation ICP-MS KW - Cellular internalization KW - Neurons PY - 2016 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-371620 DO - https://doi.org/10.1186/s12951-016-0203-z SN - 1477-3155 VL - 14 SP - Article 50 AN - OPUS4-37162 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Moraleja, I. A1 - Esteban-Fernández, Diego A1 - Lázaro, A. A1 - Humanes, B. A1 - Neumann, B. A1 - Tejedor, A. A1 - Mena, M. A1 - Jakubowski, Norbert A1 - Gómez-Gómez, M. T1 - Printing metal-spiked inks for LA-ICP-MS bioimaging internal standardization: comparison of the different nephrotoxic behavior of cisplatin, carboplatin, and oxaliplatin N2 - The study of the distribution of the cytostatic drugs cisplatin, carboplatin, and oxaliplatin along the kidney may help to understand their different nephrotoxic behavior. Laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) allows the acquisition of trace element images in biological tissues. However, results obtained are affected by several variations concerning the sample matrix and instrumental drifts. In this work, an internal standardization method based on printing an Ir-spiked ink onto the surface of the sample has been developed to evaluate the different distributions and accumulation levels of the aforementioned drugs along the kidney of a rat model. A conventional ink-jet printer was used to print fresh sagittal kidney tissue slices of 4 μm. A reproducible and homogenous deposition of the ink along the tissue was observed. The ink was partially absorbed on top of the tissue. Thus, this approach provides a pseudo-internal standardization, due to the fact that the ablation sample and internal standard take place subsequently and not simultaneously. A satisfactory normalization of LA-ICP-MS bioimages and therefore a reliable comparison of the kidney treated with different Pt-based drugs were achieved even for tissues analyzed on different days. Due to the complete ablation of the sample, the transport of the ablated internal standard and tissue to the inductively coupled plasma-mass spectrometry (ICP-MS) is practically taking place at the same time. Pt accumulation in the kidney was observed in accordance to the dosages administered for each drug. Although the accumulation rate of cisplatin and oxaliplatin is high in both cases, their Pt distributions differ. The strong nephrotoxicity observed for cisplatin and the absence of such side effect in the case of oxaliplatin could explain these distribution differences. The homogeneous distribution of oxaliplatin in the cortical and medullar areas could be related with its higher affinity for cellular transporters such as MATE2-k. KW - Bioimaging KW - LA-ICP-MS KW - Cisplatin KW - Standardization KW - Printed internal standard KW - Pt-based drugs KW - Nephrotoxicity PY - 2016 DO - https://doi.org/10.1007/s00216-016-9327-0 SN - 1618-2642 SN - 1618-2650 VL - 408 IS - 9 SP - 2309 EP - 2318 AN - OPUS4-36110 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - GEN A1 - Jakubowski, Norbert T1 - Freddy Adams and Carlo Barbante: Chemical imaging analysis (Book review) N2 - In this book many practical hints are given and analytical problems are discussed by the authors from their own experiences. A critical assessment of the methods is given, which is most important for decision makers to select a good combination of complementary methods to solve practical analytical problems. KW - Chemical imaging analysis KW - Surface analysis KW - Interface analysis PY - 2016 DO - https://doi.org/10.1007/s00216-016-9517-9 SN - 1618-2642 SN - 1618-2650 VL - 408 IS - 16 SP - 4199 EP - 4201 PB - Springer AN - OPUS4-36216 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Scharlach, C. A1 - Müller, Larissa A1 - Wagner, S. A1 - Kobayashi, Y. A1 - Kratz, H. A1 - Ebert, M. A1 - Jakubowski, Norbert A1 - Schellenberger, E. T1 - LA-ICP-MS allows quantitative microscopy of europium-doped iron oxide nanoparticles and is a possible alternative to ambiguous Prussian blue iron staining N2 - The development of iron oxide nanoparticles for biomedical applications requires accurate histological evaluation. Prussian blue iron staining is widely used but may be unspecific when tissues contain substantial endogenous iron. Here we tested whether microscopy by laser ablation coupled to inductively coupled plasma mass spectrometry (LA-ICP-MS) is sensitive enough to analyze accumulation of very small iron oxide particles (VSOP) doped with europium in tissue sections. KW - Atherosclerotic plaques KW - LA-ICP-MS microscopy KW - Quantification KW - Element microscopy KW - Histology PY - 2016 DO - https://doi.org/10.1166/jbn.2016.2230 SN - 1550-7033 SN - 1550-7041 VL - 12 IS - 5 SP - 1001 EP - 1010 AN - OPUS4-36189 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Jakubowski, Norbert A1 - Traub, Heike A1 - Kneipp, J. A1 - Drescher, D. T1 - Entwicklung von Methoden zur quantitativen Analyse von Nanopartikeln in biologischen Proben T2 - BfR-Seminar CY - Berlin, Germany DA - 2014-06-04 PY - 2014 AN - OPUS4-30780 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -