TY - JOUR A1 - Gerrits, Ruben A1 - Stepec, Biwen An A1 - Bäßler, Ralph A1 - Becker, Roland A1 - Dimper, Matthias A1 - Feldmann, Ines A1 - Goff, Kira L. A1 - Günster, Jens A1 - Hofmann, Andrea A1 - Hesse, René A1 - Kirstein, Sarah A1 - Klein, Ulrich A1 - Mauch, Tatjana A1 - Neumann-Schaal, Meina A1 - Özcan Sandikcioglu, Özlem A1 - Taylor, Nicole M. A1 - Schumacher, Julia A1 - Shen, Yin A1 - Strehlau, Heike A1 - Weise, Matthias A1 - Wolf, Jacqueline A1 - Yurkov, Andrey A1 - Gieg, Lisa M. A1 - Gorbushina, Anna T1 - A 30-year-old diesel tank: Fungal-dominated biofilms cause local corrosion of galvanised steel N2 - The increased use of biodiesel is expected to lead to more microbial corrosion, fouling and fuel degradation issues. In this context, we have analysed the metal, fuel and microbiology of a fouled diesel tank which had been in service for over 30 years. The fuel itself, a B7 biodiesel blend, was not degraded, and—although no free water phase was visible—contained a water content of ~60 ppm. The microbial community was dominated by the fungus Amorphotheca resinae, which formed thick, patchy biofilms on the tank bottom and walls. The tank sheets, composed of galvanised carbon steel, were locally corroded underneath the biofilms, up to a depth of a third of the sheet thickness. On the biofilm-free surfaces, Zn coatings could still be observed. Taken together, A. resinae was shown to thrive in these water-poor conditions, likely enhancing corrosion through the removal of the protective Zn coatings. KW - Fungal biofilms KW - Biodiesel degradation mechanisms PY - 2026 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-655014 DO - https://doi.org/10.1038/s41529-025-00731-2 SN - 2397-2106 VL - 10 IS - 1 SP - 1 EP - 14 PB - Springer Science and Business Media LLC AN - OPUS4-65501 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Vogel, Christian A1 - Helfenstein, J. A1 - Massey, M. A1 - Kretzschmar, R. A1 - Schade, U. A1 - Verel, R. A1 - Chadwick, O. A1 - Frossard, E. T1 - Spectroscopic analysis shows crandallite can be a major component of soil phosphorus N2 - Phosphorus (P) bioavailability is crucial for the productivity of natural and agricultural ecosystems, and soil P speciation plays a major role therein. Better understanding of P forms present in soil is thus essential to predict bioavailability. However, P speciation studies are only as powerful as the reference spectra used to interpret them, and most studies rely on a limited set of reference spectra. Most studies on soil P forms differentiate between Ca-bound P (e.g. apatite), organic P, Fe-bound P, and Al-bound P. In our analysis of a Ca, Al, and P rich soil from the Kohala region of Hawaii, we identified the mineral crandallite, CaAl3(PO4)2(OH)5·H2O, a mineral previously not considered to play a significant role in soils. Crandallite was first identified with powder X-ray diffraction. Subsequently reference spectra were collected, and the presence of crandallite was confirmed using micro-focused P K-edge X-ray absorption near edge structure (XANES) spectroscopy, micro-infrared spectroscopy, and solid-state 31P nuclear magnetic resonance (NMR) spectroscopy. Crandallite XANES spectra were distinct from other common XANES spectra due to the presence of features in the post-edge region of the spectrum. Linear combination fitting of bulk P K-edge XANES spectra allowed the determination of the proportion of crandallite to the total P content, indicating that crandallite comprises up to half, possibly even more of the soil P in the samples. Crandallite is therefore an important and potentially overlooked component of soil P, which pedogenically forms in soils with high P, Al, and Ca contents, where it could play an important role in P bioavailability. KW - Phosphorus KW - XANES spectrosocpy KW - Infrared spectroscopy KW - NMR spectrocopy PY - 2026 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-654968 DO - https://doi.org/10.1016/j.geoderma.2026.117712 SN - 0016-7061 VL - 467 SP - 1 EP - 10 PB - Elsevier B.V. AN - OPUS4-65496 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Liu, Cong A1 - Hellemans, Simon A1 - Kinjo, Yukihiro A1 - Mikhailova, Alina A A1 - Aumont, Cédric A1 - Weng, Yi-Ming A1 - Buček, Aleš A1 - Husnik, Filip A1 - Šobotník, Jan A1 - Harrison, Mark C A1 - McMahon, Dino P A1 - Bourguignon, Thomas T1 - Recurrent horizontal gene transfers across diverse termite genomes N2 - Horizontal gene transfer (HGT), the transmission of genetic material across species, is an important innovation source in prokaryotes. In contrast, its significance is unclear in many eukaryotes, including insects. Here, we used high-quality genomes of 45 termites and two cockroaches to investigate HGTs from non-metazoan organisms across blattodean genomes. We identified 289 genes and 2,494 pseudogenes classified into 168 orthologous groups originating from an estimated 281 HGT events. Wolbachia represented the primary HGT source, while termite gut bacteria and the cockroach endosymbiont Blattabacterium did not contribute meaningfully to HGTs. Most horizontally acquired genes descended from recent and species-specific HGTs, experienced frequent duplications and pseudogenizations, and accumulated substitutions faster than synonymous sites of native protein-coding genes. Genes frequently transferred horizontally to termite genomes included mobile genetic elements and genetic information processing genes. Our results indicate that termites continuously acquired genes through HGT, and that most horizontally acquired genes are specific to restricted lineages. Overall, genes acquired by HGT by termites and cockroaches seemed generally non-functional and bound to be lost. KW - Phylogenomics KW - Isoptera KW - Comparative genomics PY - 2026 DO - https://doi.org/10.1093/evolut/qpag003 SN - 0014-3820 SP - 1 EP - 14 PB - Oxford University Press (OUP) AN - OPUS4-65418 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Kanaris, Orestis A1 - Sobisch, Lydia-Yasmin A1 - Gödt, Annett A1 - Schreiber, Frank A1 - Nordholt, Niclas T1 - Consequences of benzalkonium chloride tolerance for selection dynamics and de novo resistance evolution driven by antibiotics N2 - Biocides are used in large amounts in industrial, medical, and domestic settings. Benzalkonium chloride (BAC) is a commonly used biocide, for which previous research revealed that Escherichia coli can rapidly adapt to tolerate BAC-disinfection, with consequences for antibiotic susceptibility. However, the consequences of BAC tolerance for selection dynamics and resistance evolution to antibiotics remain unknown. Here, we investigated the effect of BAC tolerance in E. coli on its response upon challenge with different antibiotics. Competition assays showed that subinhibitory concentrations of ciprofloxacin—but not ampicillin, colistin and gentamicin—select for the BAC-tolerant strain over the BAC-sensitive ancestor at a minimal selective concentration of 0.0013–0.0022 µg/mL. In contrast, the BAC-sensitive ancestor was more likely to evolve resistance to ciprofloxacin, colistin and gentamicin than the BAC-tolerant strain when adapted to higher concentrations of antibiotics in a serial transfer laboratory evolution experiment. The observed difference in the evolvability of resistance to ciprofloxacin was partly explained by an epistatic interaction between the mutations conferring BAC tolerance and a knockout mutation in ompF encoding for the outer membrane porin F. Taken together, these findings suggest that BAC tolerance can be stabilized in environments containing low concentrations of ciprofloxacin, while it also constrains evolutionary pathways towards antibiotic resistance. KW - AMR KW - Resistance evolution KW - Resistance selection PY - 2026 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-653842 DO - https://doi.org/10.1038/s44259-025-00170-8 SN - 2731-8745 VL - 4 IS - 1 SP - 1 EP - 13 PB - Springer Science and Business Media LLC AN - OPUS4-65384 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Stohl, Leonie A1 - Tonon, Chiara A1 - Cook, Jake A1 - Gorbushina, Anna A1 - Dehn, Frank A1 - von Werder, Julia T1 - Understanding bioreceptivity of concrete: realistic and accelerated weathering experiments with model subaerial biofilms N2 - Vertical greening systems are a promising solution to the increasing demand for urban green spaces, improving environmental quality and addressing biodiversity loss. This study facilitates the development microbially greened algal biofilm facades, which offer a low maintenance vertical green space. The study focuses on concrete as a widely used building material and explores how physical surface characteristics impact its bioreceptive properties. Concrete samples, produced from the same mix but differing in surface structure, were subjected to a laboratory weathering experiment to assess their bioreceptivity. A novel inoculation method was employed, involving a single initial inoculation with either alga ( Jaagichlorella sp.) alone, or a model biofilm consisting of a combination of the alga ( Jaagichlorella sp.) with a fungus ( Knufia petricola). The samples underwent four months of weathering in a dynamic laboratory setup irrigated with deionized water to observe subaerial biofilm attachment and growth. The formation of subaerial biofilms was monitored with high resolution surface imaging, colorimetric measurements and Imaging Pulse Amplitude Modulated Fluorometry (Imaging PAM-F), with Imaging PAM-F proving the most effective. Statistical analysis revealed that by impacting surface pH value and water retention capability, surface structures significantly influence microbial growth and that the concrete’s bioreceptivity can be influenced through thoughtful design of the materials surface. The inoculation of algae combined with a fungus facilitated the formation of a stable subaerial biofilm, enabling algae to colonize a surface structure that it could not colonize alone. This finding highlights the importance of modelling synergistic interactions present in natural biofilms. KW - Bioreceptivity KW - Concrete KW - Biofilm PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-653105 DO - https://doi.org/10.1617/s11527-025-02864-x SN - 1359-5997 VL - 59 IS - 2 SP - 1 EP - 18 PB - Springer Science and Business Media LLC AN - OPUS4-65310 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Martin, Nathan A1 - Nota, Kevin A1 - Aumont, Cédric A1 - Marchand, Grégor A1 - Marguerie, Dominique T1 - Anthropic and climatic impacts on biodiversity during the Mesolithic-Neolithic transition in North-Western France N2 - The Neolithic transition, which began around 10,000 BCE in Western Asia, has significantly impacted the biodiversity dynamics and the hunter-gatherer communities due to the beginning of anthropization and climate fluctuations during this period. Neolithic farmers gradually spread to the Atlantic margins of North-Western Europe during the 6th millennium BCE, arriving later than in other parts of the continent. This systematic review aims to shed a light on the landscape transformations and shifts in the ecological niches that occurred during neolithization in the Armorican Massif, driven by human and climatic influences, through an interdisciplinary examination of palynology, archaeology and palaeogenomics. This Massif is situated in North-Western France which hosted well established Mesolithic and Neolithic societies that have been extensively studied. However, recent research has called into question the coexistence of these two cultural groups in this area, necessitating a reevaluation of the literature in light of these new findings. This systematic review coupled with an analysis of pollen sequences reveals spatial and temporal heterogeneity in vegetation composition, openness, and the gradual introduction of domesticated taxa into the region. This analysis should be seen in the context of the delayed adoption of the agro-pastoral lifestyle in North-Western Europe, attributed to the different climatic conditions encountered, which required time for these societies and their domesticated taxa to adapt. Further investigation is needed to clearly differentiate between anthropogenic and climatic impacts and paleoclimatic reconstruction based on pollen sequences looks promising for addressing this issue. KW - Armorican massif KW - Neolithic transition KW - Anthropization KW - Climate KW - Palynology KW - Biodiversity dynamics PY - 2024 DO - https://doi.org/10.1016/j.quaint.2024.11.004 SN - 1040-6182 VL - 714 SP - 1 EP - 19 PB - Elsevier CY - Amsterdam AN - OPUS4-65313 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Sathiyamani, S. A1 - Ngiam, S. A1 - Bonnerot, O. A1 - Jaengsawang, S. A1 - Panarut, P. A1 - Helman-Wazny, Agnieszka A1 - Colini, C. T1 - Material Characterisation of 19–20th Century Manuscripts from Northern Thailand N2 - Material analysis was carried out on four manuscripts from Northern Thailand, which included two palm-leaf manuscripts and two paper manuscripts. The two palm-leaf manuscripts MS 6 and MS 7 were found to have been written in the traditional method, wherein text was incised on the surface of the leaves, and then soot applied to the surfaces, confirmed by the identification of carbon ink. MS 7 additionally showed the presence of trace levels of iron in the ink, either from soot paste or from the stylus used for inscribing. The paper manuscript MS 3 was written in iron-gall ink, with sections written using a methyl-violet based ink while MS 4 was written in carbon ink. The paper used in the case of MS 3 was found to be machine made, while khoi fibres (Streblus asper) were used for making the paper used for MS 4. A combination of traditional and modern pigments, like molybdenum orange, was used for decorating the edges and cover. The results improved our understanding of these manuscripts in particular, and also provided us with insights about the rapid adoption of modern materials and their incorporation into the production of written artefacts from Northern Thailand in the late 19th and early 20th centuries. KW - Materials analysis KW - Paper manuscript KW - Palm-leaf manuscript KW - Writing inks PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-652586 DO - https://doi.org/10.1515/res-2023-0028 SN - 0034-5806 VL - 45 IS - 2-3 SP - 117 EP - 140 PB - Walter de Gruyter GmbH AN - OPUS4-65258 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Poliakova, A. A1 - Ciotti, G. A1 - Helman-Wazny, Agnieszka A1 - Fromm, J. T1 - Phytolith assemblages from palm leaves and palm-leaf manuscripts: what is the difference and what it could mean? N2 - We studied freshly collected, dried and herbarized leaf fragments of two palms, namely Borassus flabellifer L. and Corypha umbraculifera L., most commonly used for palm-leaf manuscript (PLM) production in South (S) and Southeast Asia (SE) in order to reveal differences in their phytolith assemblages. For each of the two palms, 25 leaf samples were taken from the two Indian states of Kerala and Tamil Nadu. Dried leaf material was obtained from the fresh one by drying the leaves in air. Herbarium samples were obtained from two independent herbaria, specimen origin comprises S and SE Asia with the main focus on South India and Sri Lanka. Additionally, 25 manuscripts made of Borassus flabellifer leaves and 25 manuscripts made of Corypha umbraculifera leaves were investigated for phytoliths. All manuscripts are preliminary dated back to between the 16th and the beginning of the 20th century CE; most of them assumedly were produced in S India (Tamil Nadu and Kerala), Sri Lanka, Burma or Indonesia. Phytolith assemblages significantly differed between fresh, dry and herbarized palm leaves in comparison to PLM material, both qualitatively and quantitatively (mean r2 = - 0.61 ± 9.3 for Borassus samples and r2 = - 0.75 ± 5.3 for Corypha samples, at p < 0.001). Fifty-three phytolith types described for PLM material were not observed in any of the fresh, dry or herbarized palm-leaf samples. Geographical analysis of PLM-specific phytoliths suggests that the combination of those phytoliths could be region-related. In this paper, we prove that the methods of palaeoecological reconstructions based on detailed microscopy of the PLMs surface and phytolith analysis applied in combination with methods of mathematical and computer data analysis can contribute to answer the questions posed by material codicology by revealing lost manuscript production recipes and by studying manuscript provenance in terms of the geographical origin of the artefacts. Our approach can potentially open a new perspective for palaeoecological studies expanding their traditional scope and making them applicable to a new research field. KW - Palm-leaf manuscripts KW - Material codicology KW - Palaeoecology PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-652517 DO - https://doi.org/10.3389/fpls.2024.1482790 SN - 1664-462X VL - 15 SP - 1 EP - 29 PB - Frontiers Media SA AN - OPUS4-65251 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - European Food Safety Authority (EFSA), A1 - European Centre for Disease Prevention and Control (ECDC), A1 - European Chemicals Agency (ECHA), A1 - European Environment Agency (EEA), A1 - European Medicines Agency (EMA), A1 - European Commission's Joint Research Centre (JRC), T1 - Scientific report - Impact of the use of azole fungicides, other than as human medicines, on the development of azole‐resistant Aspergillus spp. N2 - The use of azoles in the European Union and European Economic Area (EU/EEA) other than as human medicines has raised concerns about emergence and spread of azole‐resistant Aspergillus species. EU agencies, with the support of JRC, reviewed the evidence and provided conclusions and recommendations on this topic. Although incomplete, data from 2010 to 2021 showed that around 120,000 tonnes of azoles were sold in EU/EEA for uses other than as human medicines. The majority are used as plant protection products (119,000 tonnes), with a stable temporal trend. Evidence supported a link between environmental azole exposure and cross‐resistance selection to medical azoles in Aspergillus species (primarily shown for A. fumigatus). Prevalence of azole‐resistant A. fumigatus in human A. fumigatus infections ranges from 0.7% to 63.6% among different disease presentations and geographic regions; mortality rates range from 36% to 100% for invasive aspergillosis (IA). It was concluded that azole usage outside the human domain is likely or very likely to contribute to selection of azole‐resistant A. fumigatus isolates that could cause severe disease like IA. Environmental hotspots for resistance selection were identified, including stockpiling of agricultural waste and their possible use as soil amendment/fertiliser for certain agricultural crops (for plant protection products) and freshly cut wood (for biocides). Recommendations were formulated on measures to prevent and control selection of azole resistance in A. fumigatus, including implementation of good agricultural/horticultural practices, proper agricultural and wood waste storage and management, and on approval of new azole fungicides or renewal of existing fungicides. Recommendations on topics to be covered by studies provided when submitting applications for the approval of azole fungicides were listed. For the evaluation of such studies within the approval procedure, a preliminary framework for risk assessment was developed and should be further refined. Data gaps and uncertainties were identified, alongside with respective recommendations to address them. KW - Antimicrobial surfaces KW - Biocides KW - Antimicrobial resistance KW - Azoles KW - Fungi KW - Wood preservatives PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-652175 DO - https://doi.org/10.2903/j.efsa.2025.9200 SN - 1831-4732 VL - 23 IS - 1 SP - 1 EP - 35 PB - Wiley CY - Hoboken, NJ AN - OPUS4-65217 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Liu, Cong A1 - Aumont, Cédric A1 - Mikhailova, Alina A. A1 - Audisio, Tracy A1 - Hellemans, Simon A1 - Weng, Yi-Ming A1 - He, Shulin A1 - Clitheroe, Crystal A1 - Wang, Zongqing A1 - Haifig, Ives A1 - Sillam-Dussès, David A1 - Buček, Aleš A1 - Tokuda, Gaku A1 - Šobotník, Jan A1 - Harrison, Mark C. A1 - McMahon, Dino P. A1 - Bourguignon, Thomas T1 - Unravelling the evolution of wood-feeding in termites with 47 high-resolution genome assemblies N2 - Termites are a lineage of social cockroaches abundant in tropical ecosystems where they are key decomposers of organic matter. Despite their ecological significance, only a handful of reference-quality termite genomes have been sequenced, which is insufficient to unravel the genetic mechanisms that have contributed to their ecological success. Here, we perform sequencing and hybrid assembly of 45 taxonomically and ecologically diverse termites and two cockroaches, resulting in haplotype-merged genome assemblies of 47 species, 22 of which were near-chromosome level. Next, we examine the link between termite dietary evolution and major genomic events. We find that Termitidae, which include ~80% of described termite species, have larger genomes with more genes and a higher proportion of transposons than other termites. Our analyses identify a gene number expansion early in the evolution of Termitidae, including an expansion of the repertoire of CAZymes, the genes involved in lignocellulose degradation. Notably, this expansion of genomes and gene repertoires coincided with the origin of soil-feeding in Termitidae and remained unchanged in lineages that secondarily reverted to a wood-based diet. Overall, our sequencing effort multiplies the number of available termite genomes by six and provides insights into the genome evolution of an ancient lineage of social insects. KW - Comparative genomics KW - Entomology KW - Genome evolution KW - Phylogenetics PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-651719 DO - https://doi.org/10.1038/s41467-025-65969-5 SN - 2041-1723 VL - 16 SP - 1 EP - 14 PB - Springer Science and Business Media LLC AN - OPUS4-65171 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -