TY - JOUR A1 - Biesen, L. A1 - Krenzer, J. A1 - Nirmalananthan-Budau, Nithiya A1 - Resch-Genger, Ute A1 - Müller, Th. J. J. T1 - Asymmetrically bridged aroyl-S,N-ketene acetalbased multichromophores with aggregationinduced tunable emission N2 - Asymmetrically bridged aroyl-S,N-ketene acetals and aroyl-S,N-ketene acetal multichromophores can be readily synthesized in consecutive three-, four-, or five-component syntheses in good to excellent yields by several successive Suzuki-couplings of aroyl-S,N-ketene acetals and bis(boronic)acid esters. Different aroyl-S,N-ketene acetals as well as linker molecules yield a library of 23 multichromophores with substitution and linker pattern-tunable emission properties. This allows control of different communication pathways between the chromophores and of aggregation-induced emission (AIE) and energy transfer (ET) properties, providing elaborate aggregation-based fluorescence switches. KW - Dye KW - Aggregation KW - Aggregation induced emission KW - Signal enhancement KW - Energy transfer KW - Switch KW - Sensor KW - Quantum yield KW - Lifetime KW - Photophysics KW - Sythesis KW - Nanaoparticle PY - 2022 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-550719 DO - https://doi.org/10.1039/d2sc00415a VL - 13 SP - 5374 EP - 5381 PB - Royal Society of Chemistry AN - OPUS4-55071 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Biesen, L. A1 - May, L. A1 - Nirmalananthan-Budau, Nithiya A1 - Hoffmann, Katrin A1 - Resch-Genger, Ute A1 - Müller, T. J. J. T1 - Communication of Bichromophore Emission upon Aggregation – Aroyl-S,N-ketene Acetals as Multifunctional Sensor Merocyanines N2 - Aroyl-S,N-ketene acetal-based bichromophores can be readily synthesized in a consecutive three-component synthesis in good to excellent yields by condensation of aroyl chlorides and an N-(p-bromobenzyl) 2-methyl benzothiazolium salt followed by a Suzuki coupling, yielding a library of 31 bichromophoric fluorophores with substitution patterntunable emission properties. Varying both chromophores enables different communication pathways between the chromophores, exploiting aggregation-induced emission (AIE) and energy transfer (ET) properties, and thus, furnishing aggregation-based fluorescence switches. Possible applications range from fluorometric analysis of alcoholic beverages to pH sensors. KW - Dye KW - Fluorescence KW - Aggregation induced emission KW - Signal enhancement KW - Energy transfer KW - Switch KW - Sensor KW - Quantum yield KW - Lifetime KW - Photophysics KW - Synthesis PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-531123 DO - https://doi.org/10.1002/chem.202102052 VL - 27 IS - 53 SP - 13426 EP - 13434 PB - Wiley-VCH AN - OPUS4-53112 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Biesen, L. A1 - Nirmalananthan-Budau, Nithiya A1 - Hoffmann, Katrin A1 - Resch-Genger, Ute A1 - Müller, T. J. J. T1 - Solid-State Emissive Aroyl-S,N-Ketene Acetals with Tunable N2 - N-Benzyl aroyl-S,N-ketene acetals can be readily synthesized by condensation of aroyl chlorides and N-Benzyl 2-methyl benzothiazolium salts in good to excellent yields, yielding a library of 35 chromophores with bright solid-state emission and aggregation-induced emission characteristics. Varying the substituent from electron-donating to electronwithdrawing enables the tuning of the solid-state emission Color from deep blue to red. KW - Nano KW - Nanoparticle KW - Photoluminescence KW - Fluorescence KW - Quantum yield KW - Photophysics KW - Lifetime KW - Sensor KW - dye KW - Enhancement KW - Particle KW - Polarity KW - AIE KW - Aggregation KW - Aggregation-induced emission KW - Solid state emission PY - 2020 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-509072 DO - https://doi.org/10.1002/anie.201916396 VL - 59 IS - 25 SP - 10037 EP - 10041 PB - Wiley Online Libary AN - OPUS4-50907 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Billimoria, K. A1 - Andresen, Elina A1 - Resch-Genger, Ute A1 - Goenaga-Infante, H. T1 - A Strategy for Quantitative Imaging of Lanthanide Tags in A549 Cells Using the Ratio of Internal Standard Elements N2 - One remaining handicap for spatially resolved elemental quantification in biological samples is the lack of a suitable internal standard (IS) that can be reliably measured across both calibration standards and samples. In this work, multielement quantitative intracellular imaging of cells tagged with lanthanide nanoparticles containing key lanthanides, e.g., Eu and Ho, is described using a novel strategy that uses the ratio of IS elements and LA-ICP-TOFMS analysis. To achieve this, an internal standard layer is deposited onto microscope slides containing either gelatin calibration standards or Euand Ho-tagged cell samples. This IS layer contains both gallium (Ga) and indium (In). Monitoring either element as an IS individually showed significant variability in intensity signal between sample or standards prepared across multiple microscope slides, which is indicative of the difficulties in producing a homogeneous film at intracellular resolution. However, normalization of the lanthanide signal to the ratio of the IS elements improved the calibration correlation coefficients from 0.9885 to 0.9971 and 0.9805 to 0.9980 for Eu and Ho, respectively, while providing a consistent signal to monitor the ablation behavior between standards and samples. By analyzing an independent quality control (QC) gelatin sample spiked with Eu and Ho, it was observed that without normalization to the IS ratio the concentrations of Eu and Ho were highly biased by approximately 20% in comparison to the expected values. Similarly, this overestimation was also observed in the lanthanide concentration distribution of the cell samples in comparison with the normalized data. KW - Nanoparticle KW - Nano KW - Luminescence KW - Quality assurance KW - Synthesis KW - Standardization KW - Reference material KW - ICP-MS KW - LA-ICP-MS KW - Quantification KW - Bioimaging PY - 2024 DO - https://doi.org/10.1021/acs.analchem.4c02763 SN - 0003-2700 VL - 96 IS - 30 SP - 12570 EP - 12576 AN - OPUS4-60768 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Billimoria, K. A1 - Diaz Fernandez, Y. A. A1 - Andresen, Elina A1 - Sorzabal-Bellido, I. A1 - Huelga-Suarez, G. A1 - Bartczak, D. A1 - Ortiz de Solórzano, C. A1 - Resch-Genger, Ute A1 - Goenaga Infante, H. T1 - The potential of bioprinting for preparation of nanoparticle-based calibration standards for LA-ICP-ToF-MS quantitative imaging N2 - This paper discusses the feasibility of a novel strategy based on the combination of bioprinting nano-doping technology and laser ablation-inductively coupled plasma time-of-flight mass spectrometry analysis for the preparation and characterization of gelatin- based multi-element calibration standards suitable for quantitative imaging. To achieve this, lanthanide up-conversion nanoparticles were added to a gelatin matrix to produce the bioprinted calibration standards. The features of this bioprinting approach were com- pared with manual cryosectioning standard preparation, in terms of throughput, between batch repeatability and elemental signal homogeneity at 5 μm spatial resolution. By using bioprinting, the between batch variability for three independent standards of the same concentration of 89 Y (range 0–600 mg/kg) was reduced to 5% compared to up to 27% for cryosectioning. On this basis, the relative standard deviation ( RSD ) obtained between three independent calibration slopes measured within 1 day also reduced from 16% (using cryosectioning ) to 5% (using bioprinting), supporting the use of a single standard preparation replicate for each of the concentrations to achieve good calibration performance using bioprinting. This helped reduce the analysis time by approximately 3-fold. With cryosectioning each standard was prepared and sectioned individually, whereas using bio-printing it was possible to have up to six different standards printed simultaneously, reducing the preparation time from approximately 2 h to under 20 min (by approxi- mately 6-fold). The bio-printed calibration standards were found stable for a period of 2 months when stored at ambient temperature and in the dark. KW - Environmental analysis KW - LA-ICP-MS KW - Lanthanide KW - Tag KW - Fluorescence KW - Nanoparticles KW - Reference material KW - Quality assurance KW - 3D-printing KW - Synthesis KW - Production KW - Multimodal PY - 2022 DO - https://doi.org/10.1093/mtomcs/mfac088 SN - 1756-591X VL - 14 IS - 12 SP - 1 EP - 9 PB - Oxford University Press CY - Oxford AN - OPUS4-57018 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Bilsel, M. A1 - Gökçen, T. A1 - Binici, B. A1 - Isleyen, A. A1 - Piechotta, Christian A1 - Kar-wai, A. A1 - Krylov, A. A1 - Miheeva, A. A1 - Beliakov, M. A1 - Palagina, M. A1 - chenko, Irina Tka A1 - Perkola, N. A1 - Lewin, M. A1 - Hua, T. T1 - High polarity analyte(s) in aqueous media: determination of L-PFOA and L-PFOS in ground water N2 - The CCQM-K156 comparison was coordinated by TUBITAK UME on behalf of the Organic Analysis Working Group (OAWG) of the Comité Consultatif pour la Quantité de Matière (CCQM) for National Measurement Institutes (NMIs) and Designated Institutes (DIs) which provide measurement services in organic analysis under the 'Comité International des Poids et Mesures' Mutual Recognition Arrangement (CIPM MRA). Perfluoro alkyl substances (PFAS) such as PFOS and PFOA have been used in numerous industrial applications and products. Because of their high stability and resistance to biodegradation, atmospheric photooxidation, direct photolysis and hydrolysis, they are extremely persistent in the environment. The European Union (EU) Water Framework Directive lists PFOS as a priority hazardous substance that poses a significant risk to the aquatic environment. The use of PFOS-containing Aqueous Film-Forming Foams (AFFFs) has been banned since June 2011 in the EU. As relatively water-soluble, effectively non-degradable compounds, PFOS and PFOA migrate to ground water. They are not removed in the conventional drinking water treatment, and therefore cause health risks in polluted areas. The EU Drinking Water Directive and the European Commission has proposed a limit value of 100 ng/L for the sum of 20 PFAS, including PFOS and PFOA. This study provides the means for assessing measurement capabilities for determination of high polarity measurands in a procedure that requires extraction, clean-up, analytical separation and detection. Successful participation in CCQM-K156 demonstrates measurement capabilities in determining mass fraction of organic compounds, with a molecular mass of 200 g/mol to 700 g/mol, having high polarity pKow -2, in a mass fraction range from 0.5 ng/kg to 500 ng/kg in aqueous media. Nine NMIs and DIs participated in the CCQM-K156 key comparison. Seven institutes reported their results. SPE was applied in the sample pre-treatment and LC-MS was applied for detection. All participating laboratories applied isotope dilution mass spectrometry (IDMS) techniques for quantification. Participants established the metrological traceability of their results using certified reference materials (CRMs) from NMIs with stated traceability; where commercially available high purity materials were used the purity was determined in-house. The CCQM-K156 results for L-PFOA and L-PFOS range from 2.75 ng/kg to 5.50 ng/kg with a % RSD of 19.5 % for L-PFOA and from 2.04 ng/kg to 4.45 ng/kg with a % RSD of 21.3 % for L-PFOS. The KCRV was assigned using a Hierarchical Bayesian Random Effects Model (HB REM) estimator from the values reported by six of the participants. One participant result of L-PFOS and one result of L-PFOA were excluded from the KCRV for technical reasons. The KCRV was 4.9 ng/kg ± 0.4 ng/kg for L-PFOA and 3.8 ng/kg ± 0.4 ng/kg for L-PFOS. The six institutes that were included in the assignment of consensus KCRV all agreed within their standard uncertainties. To reach the main text of this paper, click on Final Report. Note that this text is that which appears in Appendix B of the BIPM key comparison database https://www.bipm.org/kcdb/. The final report has been peer-reviewed and approved for publication by the CCQM, according to the provisions of the CIPM Mutual Recognition Arrangement (CIPM MRA). KW - PFAS KW - Surface water KW - ILC KW - CCQM PY - 2022 DO - https://doi.org/10.1088/0026-1394/59/1A/08016 VL - 59 IS - 1A SP - 1 EP - 3 PB - IOP Publishing AN - OPUS4-58941 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Biyikal, Mustafa T1 - Development of a Handheld Device for the Trace Detection of Explosives N2 - With the help of the EXIST research transfer the startup True Detection System (TDS) will develop a portable and easy-to-use handheld device based on chemical-optical sensors that can detect the smallest traces of various explosives and markers (e.g. TNT, C4, ANFO, TATP, DMDNB, etc.) and pure salts (e.g. potassium nitrate) reliably and without major cross-sensitivities. The device has been developed over the last 10 years at the Federal Institute for Material Research and Testing (BAM) in cooperation with an SME. Within the next 18 months, a laboratory prototype will now be converted into a commercial device. T2 - Photonics Days Berlin Brandenburg CY - Berlin, Germany DA - 09.10.2023 KW - Explosives KW - Trace detection KW - Handheld device KW - Lab-on-a-chip KW - Start-up PY - 2023 AN - OPUS4-58541 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Biyikal, Mustafa T1 - Development of a handheld device for the trace detection of explosives N2 - This presentation introduces a new explosives trace detector (ETD), a handheld device developed by True Detection Systems (TDS). Addressing the limitations of current handheld detectors—such as unreliable measurements and cumbersome operation— the new ETD XT-1 integrates advanced sensor technology, including a Lab-on-a-Chip, to deliver high sensitivity and accuracy. Capable of detecting trace levels of substances like TNT, TATP, and ammonium nitrate, the device offers rapid, user-friendly detection through AI/ML-enhanced algorithms. These algorithms enable precise substance identification by analyzing absorption and desorption rates, significantly reducing false positives. The XT-1 has broad applications in security, hazardous material detection, and environmental monitoring. T2 - Photonics Days Berlin Brandenburg CY - Berlin, Germany DA - 09.10.2024 KW - Explosives KW - Trace detection KW - Handheld device KW - Lab-on-a-chip KW - Fluorescence PY - 2024 AN - OPUS4-61433 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Biyikal, Mustafa T1 - Handgerät für den mobilen Einsatz zur Detektion von Sprengstoffspuren N2 - Mithilfe des EXIST-Forschungstransfers wird ein tragbares und leicht zu bedienendes Handgerät auf der Basis von chemisch-optischen Sensoren entwickelt, welches kleinste Spuren von verschiedensten Sprengstoffen und Markern (z.B. TNT, C4, ANFO, TATP, DMDNB etc.) und reine Salze (z. B. Kaliumnitrat) sicher und ohne größere Querempfindlichkeiten detektieren kann. Das Gerät wurde in den letzten 10 Jahren bei der Bundesanstalt für Materialforschung und -prüfung (BAM) entwickelt und wird von der 2024 ausgegründeten Firma Noxoon GmbH in ein kommerzielles Gerät überführt. Die Vorteile des Handgeräts sind die hohe Selektivität, die hohe Sensitivität, die schnelle Detektion in wenigen Sekunden bis zur Ergebnisanzeige sowie der schnelle und das geringe Gewicht des Gerätes von 900 g. Neben den Vorteilen findet sich auch zahlreiche Alleinstellungsmerkmale in der Benutzung des Gerätes. So können z.B. - reine Salze - Sprengstoffe in Gegenwart von Wasser - Sprengstoffe und Drogen in versiegelten Briefumschlägen detektiert werden. Ein besonderes Alleinstellungsmerkmal ist, dass eine Reinigung des Handgeräts nach Messungen von stark kontaminierten Proben nicht notwendig ist. Für den deutschsprachigen bzw. europäischen Raum existiert noch kein vergleichbares Gerät. Das kommerzielle Gerät soll ab 2025 auf den Markt gebracht werden und wird einen wichtigen Beitrag zur öffentlichen Sicherheit und zum Umweltschutz leisten. T2 - BBK Fachkongress "Forschung für den Bevölkerungsschutz" CY - Bonn, Germany DA - 05.02.2025 KW - Explosivstoffe KW - Detektion KW - Handgerät PY - 2025 AN - OPUS4-65031 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Biyikal, Mustafa T1 - Handgeräte zur Detektion von Sprengstoffspuren N2 - Der Übersichtsvortrag stellt den aktuellen Stand zu Handgeräten zur Detektion von Sprengstoffspuren vor. T2 - Symposium Anlagensicherheit 2025 CY - Hamburg, Germany DA - 04.02.2025 KW - Explosivstoffe KW - Detektion KW - Handgerät PY - 2025 AN - OPUS4-65029 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Biyikal, Mustafa A1 - Rurack, Knut T1 - Development of a Lab-on-a-Chip for the Detection of Nerve Agents with a Handheld Device N2 - The development of a Lab-on-a-Chip (LoC) is presented, which can detect reactive phosphorous compounds in the gas phase in combination with an optochemical hand-held sensor. The LoC prototype contains three pairs of sensing materials containing fluorescent indicator dyes in various carrier materials. By measuring the fluorescence response to phosphoryl chloride, a surrogate compound, the detection of chemical warfare agents (CWAs) in gas phase becomes possible within seconds, introducing a novel approach to CWA detection. T2 - 2023 IEEE SENSORS Conference CY - Vienna, Austria DA - 29.10.2023 KW - Lab-on-a-Chip KW - Nerve agents KW - Hand-held KW - Fluorescence KW - Toxic industrial chemicals PY - 2023 UR - https://ieeexplore.ieee.org/document/10325263 SN - 979-8-3503-0387-2 DO - https://doi.org/10.1109/SENSORS56945.2023.10325263 SP - 1 EP - 4 PB - IEEE CY - New York AN - OPUS4-59367 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Blanchard, V. A1 - Traub, Heike T1 - Central project for biochemical analysis of proteoglycans and glycosaminoglycans and for element-specific microscopy N2 - Nearly all disease processes are associated with variations of components of the extracellular matrix (ECM) that are typically observed during the development of inflammation. This concerns for example proteoglycans and their associated glycosaminoglycans (GAG), which have been shown to bind to cationic metal imaging probes due to their strong complexing activity. The complexing activity largely depends on the degree of GAG sulfation and/or carboxylation as well as on the GAG isomericity. In this central project, we investigate GAG structures from inflammatory disorders (namely cardiovascular diseases, inflammatory intestinal diseases and neuroinflammation) provided by researchers of the Collaborative Research Center at the molecular disaccharidic level using chromatographic and mass spectrometric methods. In parallel, the spatial localization and quantification of metal-based imaging probes are evaluated by LA-ICP-MS imaging. T2 - 1st International Symposium In vivo Visualization of Extracellular Matrix Pathology CY - Online Meeting DA - 27.05.2021 KW - Laser ablation KW - ICP-MS KW - MALDI PY - 2021 AN - OPUS4-52716 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Blume, Simon T1 - Femtosecond vs. Nanosecond Laser-induced XUV Spectroscopy (LIXS) N2 - In contrast to laser-induced breakdown spectroscopy (LIBS), measuring after a delay as long as a few microseconds, laser-induced XUV spectroscopy (LIXS) takes advantage of emissions from the very first instant of the pristine plasma. This process exhibits stable and intense line and recombination emissions in the XUV-range. Therefore, common challenges for precise measurements (e.g. quantification efforts) in LIBS caused by signal intensity fluctuations due to matrix effects and plasma-flicker noise are improved, as shown for ns-pulses. A femtosecond laser (pulse length ~100 fs) interacts fundamentally different with matter than a nanosecond laser. Of the many photons needed for ionization of the sample, less are absorbed via inverse Bremsstrahlung and more in a Franck-Condon multiphoton absorption (MPA) process. In combination with the higher peak power, and therefore higher initial plasma temperature (> 10 eV), atoms are selectively ionized to a higher degree while at the same time thermal dissipation and equilibration is reduced. This specificity in excitation leads to a reduced background and the highly ionized atoms overwhelmingly emit the desired XUV-radiation. Thus, fs-LIXS promises to lead to “cleaner” spectra with sharper separation of the emission lines. The capabilities of a fs-LIXS setup in comparison to ns-LIXS will be discussed. Samples of pure elements (Al, Si, Ni, Fe, Mg), as well as composite samples (CaF, LiF, PTFE, polypropylene) serve as model systems to demonstrate these capabilities. T2 - EMSLIBS 2025 CY - Senlis, France DA - 26.01.2026 KW - Femtosecond KW - LIXS KW - XUV KW - Elemental analysis PY - 2026 AN - OPUS4-65470 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Blume, Simon T1 - Exploiting Lithium Self-Absorption in a Laser-Induced Breakdown Plasma for Isotopic Analysis via Spatial Heterodyne Spectroscopy N2 - Lithium-ion batteries are ubiquitous in modern life. From powering consumer electronics to enabling electric mobility and energy storage, they are a key building block of a sustainable future. Determination of the ratio of the two naturally abundant stable isotopes, 7Li and 6Li, provides access to a wide variety of information, such as studying the aging processes of lithium-ion batteries or elucidating the isotopic fingerprinting of natural or recycled sources of lithium. However, accurately measuring the lithium isotope ratio in complex samples remains challenging, often requiring either extensive sample pretreatment or specialized equipment, thus impeding in-situ and high-throughput demands of global industries. Recognition and determination of the individual lithium isotopes with conventional laser-induced breakdown spectroscopy (LIBS) setups is nearly impossible. While LIBS offers several advantages, such as obviating time- and resource-intensive sample preparation and enabling rapid measurements, the high temperature (~20,000 K) of the plasma, as well as the Stark-broadening caused by the nascent free electrons spectrally broaden the atomic emission lines to such an extent that the isotopic shift of the lithium doublet at 670 nm cannot be resolved. Since, the excited state energy for this transition amounts to only 14,900 cm-1, lithium exhibits a pronounced self-absorption dip in the emission signal. This self-absorption dip is significantly less affected by the broadening effects, therefore, allowing for the resolution of the isotopic shift from its line shape. Spatial heterodyne spectroscopy (SHS) offers the superior resolution capabilities necessary to differentiate the individual isotopic contributions. To address the generally limited sensitivity of SHS, a high-repetition-rate (>10 kHz) laser allows the accumulation of more than 10,000 lasing events per spectral recording for a sufficient signal-to-noise ratio and gain statistical validity. Optical lithium fluoride serves as a model sample to showcase the analytical performance. Additionally, the impact of the laser parameters on the self-absorption will also be discussed. T2 - ANAKON 2025 CY - Leipzig, Germany DA - 10.03.2025 KW - Isotopic Analysis KW - Spatial Heterodyne Spectroscopy PY - 2025 AN - OPUS4-63559 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Blume, Simon T1 - Femtosecond Laser-induced XUV Spectroscopy (LIXS) for Elemental Analysis N2 - In a typical laser-induced breakdown spectroscopy (LIBS) setup, emissions from collisional excitation of the atoms in the later stages of the plasma are detected and provide information about the elemental fingerprint of the sample. However, precise measurements, in particular quantification efforts, suffer from fluctuations of the intensity of the detected emission lines due to matrix effects and plasma-flicker noise, as well as significant background noise. In contrast, the early stages of the plasma are dominated by electron-ion recombination and Bremsstrahlung, which lead to sharp and intense x-ray emissions with consistent intensity profiles between laser pulses and suppressed background noise, therefore improving the limit of detection, especially for lighter elements. These emissions are detected in laser-induced XUV spectroscopy (LIXS).[1] Introduction of a femtosecond laser (pulse length ~100 fs) to the LIXS setup fundamentally changes the laser energy absorption and ablation process. The laser pulse energy is absorbed and redistributed by multiphoton absorption and inverse Bremsstrahlung and operates on a time frame faster than the plasma formation. Additionally, the plasma formation itself is accelerated leading to signal generation in the XUV-range before generation of the undesired background emissions. Thus, utilization of a femtosecond laser allows for further suppression of broadband emissions from the plasma allowing for sharper separation of the emission lines and improved limit of detection. This work presents the results of the combination of a LIXS setup with a femtosecond laser and assess the capabilities of this system with a model sample of cathode material from a spent lithium-ion battery. T2 - AMACEE 2025 CY - Brno, Czech Republic DA - 26.8.2025 KW - LIXS KW - Femtosecond laser KW - Instrumentation PY - 2025 AN - OPUS4-64118 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Blume, Simon T1 - Isotopic analysis of lithium via acousto-optically gated high-repetition laser-induced breakdown spectroscopy and spatial heterodyne spectroscopy N2 - Acousto-optically gating the emission signal from a laser-induced breakdown spectroscopy (LIBS) plasma negates some of the line-broadening effects, therefore, improving the signal line shape. However, the remaining influences disallow the differentiation of the contributions of the individual lithium isotopes, even when utilizing a high-resolution spatial heterodyne spectrometer (SHS). Nevertheless, isotopic analysis of lithium with LIBS is still feasible, because lithium exhibits a strong self-absorption dip in the emission signal, which is likewise characterized by the isotopic shift and even benefits from the broad emission lines typically observed in LIBS. The isotopic ration can be resolved from the absorption dip via high-resolution SHS. T2 - SciX 2024 CY - Raleigh, NC, USA DA - 20.10.2024 KW - LIBS KW - SHS KW - Isotopic analysis KW - Lithium PY - 2024 AN - OPUS4-62012 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Blumrich, A. A1 - Vogler, G. A1 - Dresen, S. A1 - Diop, S. B. A1 - Jaeger, Carsten A1 - Leberer, S. A1 - Grune, J. A1 - Wirth, E. K. A1 - Hoeft, B. A1 - Renko, K. A1 - Foryst-Ludwig, A. A1 - Spranger, J. A1 - Sigrist, S. A1 - Bodmer, R. A1 - Kintscher, U. T1 - Fat-body brummer lipase determines survival and cardiac function during starvation in Drosophila melanogaster N2 - The cross talk between adipose tissue and the heart has an increasing importance for cardiac function under physiological and pathological conditions. This study characterizes the role of fat body lipolysis for cardiac function in Drosophila melanogaster. Perturbation of the function of the key lipolytic enzyme, brummer (bmm), an ortholog of themammalian ATGL (adipose triglyceride lipase) exclusively in the fly’s fat body, protected the heart against starvation-induced dysfunction. We further provide evidence that this protection is caused by the preservation of glycerolipid stores, resulting in a starvation-resistant maintenance of energy supply and adequate cardiac ATP synthesis. Finally, we suggest that alterations of lipolysis are tightly coupled to lipogenic processes, participating in the preservation of Lipid energy substrates during starvation. Thus, we identified the inhibition of adipose tissue lipolysis and subsequent energy preservation as a protective mechanism against cardiac dysfunction during catabolic stress. KW - High-resolution mass spectrometry KW - Nontarget analysis PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-528756 DO - https://doi.org/10.1016/j.isci.2021.102288 VL - 24 IS - 4 SP - 102288 AN - OPUS4-52875 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Boehm, U. A1 - Nelson, G. A1 - Brown, C. M. A1 - Bagley, S. A1 - Bajcsy, P. A1 - Bischof, J. A1 - Dauphin, A. A1 - Dobbie, I. M. A1 - Eriksson, J. E. A1 - Faklaris, O. A1 - Fernandez-Rodriguez, J. A1 - Ferrand, A. A1 - Gelman, L. A1 - Gheisari, A. A1 - Hartmann, H. A1 - Kukat, C. A1 - Laude, A. A1 - Mitkovski, M. A1 - Munck, S. A1 - North, A. J. A1 - Rasse, T. M. A1 - Resch-Genger, Ute A1 - Schuetz, L. C. A1 - Seitz, A. A1 - Strambio-De-Castillia, C. A1 - Swedlow, J. R. A1 - Nitschke, R. T1 - QUAREP-LiMi: A community endeavor to advance quality assessment and reproducibility in light microscopy N2 - The community-driven initiative Quality Assessment and Reproducibility for Instruments & Images in Light Microscopy (QUAREP-LiMi) wants to improve reproducibility for light microscopy image data through Quality control (QC) management of instruments and images. It aims for a common set of QC guidelines for Hardware calibration and image acquisition, management and analysis. KW - Fluorescence KW - Microscopy KW - Quality assurance KW - Comparability KW - Imaging KW - Standards KW - Reference materials KW - Reliability KW - Data KW - Reference data KW - Biology KW - Medicine KW - Life science PY - 2021 DO - https://doi.org/10.1038/s41592-021-01162-y SN - 1548-7105 VL - 18 SP - 1424 EP - 1427 PB - Nature Publishing Group CY - London AN - OPUS4-52722 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bornemann-Pfeiffer, Martin T1 - Modular production involving benchtop NMR - Current Application Examples Driven by Digitalization N2 - The demand for increasing product diversity in the chemical and pharmaceutical industry calls for new production processes that enable greater flexibility. Therefore, plants are needed which can be adapted to new processes in a fast manner and be scaled up and down easily to volatile market demands. Modular production techniques in combination with advanced process analytical technology (PAT) are considered as a promising solution able to fulfil these requirements. The success and acceptance of modular concepts in both new and existing plants is dependent of its reliability, easy applicability, and standardization. In recent past, enormous efforts were made to overcome existing barriers in a superordinate level, e.g. DEXPI, ENPRO, or MTP naming just a few. Here, we’d like to present a few, more hands-on, application examples which are shown in Figure 1 aiming to increase process flexibility and applicability. T2 - ProcessNET Jahrestagung 2022 Aachen CY - Aachen, Germany DA - 12.09.2022 KW - Process analytical technology KW - NMR spectroscopy KW - Digitization KW - Additive manufacturing PY - 2022 AN - OPUS4-55975 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bornemann-Pfeiffer, Martin T1 - Modular production involving benchtop NMR Current Application Examples Driven by Digitalization N2 - The demand for increasing product diversity in the chemical and pharmaceutical industry calls for new production processes that enable greater flexibility. Therefore, plants are needed which can be adapted to new processes in a fast manner and be scaled up and down easily to volatile market demands. Modular production techniques in combination with advanced process analytical technology (PAT) are considered as a promising solution able to fulfil these requirements. The success and acceptance of modular concepts in both new and existing plants is dependent of its reliability, easy applicability, and standardization. In recent past, enormous efforts were made to overcome existing barriers in a superordinate level, e.g. DEXPI, ENPRO, or MTP naming just a few. Here, we’d like to present a few, more hands-on, application examples which are shown in Figure 1 aiming to increase process flexibility and applicability. T2 - Achema 2022 CY - Frankfurt a.M., Germany DA - 22.08.2022 KW - Process analytical technology KW - NMR spectroscopy KW - Digitization PY - 2022 AN - OPUS4-55974 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bornemann-Pfeiffer, Martin T1 - Modular production involving benchtop NMR Current Application Examples Driven by Digitalization N2 - The demand for increasing product diversity in the chemical and pharmaceutical industry calls for new production processes that enable greater flexibility. Therefore, plants are needed which can be adapted to new processes in a fast manner and be scaled up and down easily to volatile market demands. Modular production techniques in combination with advanced process analytical technology (PAT) are considered as a promising solution able to fulfil these requirements. The success and acceptance of modular concepts in both new and existing plants is dependent of its reliability, easy applicability, and standardization. In recent past, enormous efforts were made to overcome existing barriers in a superordinate level, e.g. DEXPI, ENPRO, or MTP naming just a few. Here, we’d like to present a few, more hands-on, application examples which are shown in Figure 1 aiming to increase process flexibility and applicability. T2 - AK Prozessanalytik Jahrestagung 2022 CY - Amersfoort, The Netherlands DA - 19.09.2022 KW - Process analytical technology KW - NMR spectroscopy KW - Digitization KW - Additive manufacturing PY - 2022 AN - OPUS4-55976 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bornemann-Pfeiffer, Martin T1 - Modular production involving Benchtop NMR: Current application examples driven by digitalization N2 - The demand for increasing product diversity in the chemical and pharmaceutical industry calls for new production processes that enable greater flexibility. Therefore, plants are needed which can be adapted to new processes in a fast manner and be scaled up and down easily to volatile market demands. Modular production techniques in combination with advanced process analytical technology (PAT) are considered as a promising solution able to fulfil these requirements. The success and acceptance of modular concepts in both new and existing plants is dependent of its reliability, easy applicability, and standardization. In recent past, enormous efforts were made to overcome existing barriers in a superordinate level, e.g. DEXPI [1], ENPRO [2], or MTP [3] naming just a few. Here, we’d like to present a few, more hands-on, application examples which are shown in Figure 1 aiming to increase process flexibility and applicability. This includes: a) The development of an additively manufactured mixer—flow reactor combination for the application inside of NMR instruments. [4] b) The application of automated, model-based approaches for model development and spectra evaluation. c) The application of machine-assisted spectral model building as a genuine alternative to classical model-based approaches [5] d) Improvement of NIR calibration through online available NMR reference data. [6] These examples represent miscellaneous use cases but result of the same fact: the increased use and availability of data through advanced PAT and therefore new opportunities utilizing them. T2 - SMASH - Small Molecule NMR Conference CY - Online meeting DA - 30.08.2021 KW - Process analytical technology KW - NMR spectroscopy KW - Automation PY - 2021 AN - OPUS4-53803 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bornemann-Pfeiffer, Martin T1 - Additively manufactured Flow Cells for Inline Mixing and Reaction Monitoring with Low-Field NMR Spectroscopy N2 - The demand for increasing product diversity in the chemical process industry calls for new production processes that enable greater flexibility. Therefore, plants are needed that produce significant quantities for market supply that can be scaled up to several tons per year. Compared to traditional batch processes, intensified continuous production enables not only flexibility but also the production of compounds that are difficult to produce. Custom-designed small-scale reactors significantly improve heat and mass transfer through micro mixing and can improve safety, e.g. in the case of high grade exothermic or high-pressure reactions, and might play an important role for customized, modular production facilities.1 Combined with optimally designed flow cells, compact NMR instruments currently present promising analytical tools for use in flow chemistry applications.2,3 In recent process monitoring applications, the flow cell and the mixing unit are usually separated parts leading to a severe time delay between mixing and first data acquisition. In this work, we present a comprehensive workflow for the design of a flow cell−mixer combination based on CFD simulation and other design principles.4 Due to the increasing opportunities in additive manufacturing of ceramics, it was possible to realize an optimized SMX-type mixer with a fully integrated NMR flow cell (cf. Fig. 1). Validation studies exhibited 1H NMR spectra with a quality comparable to common NMR glass tubes. So far, the mixing performance of the system has been evaluated for different mass flow rates within the intended working range of 5–120 seconds region and compared to ideally mixed samples. Thus, the integrated flow cell−static mixer combination can be used for different purposes such as evaluation of fluid properties, equilibration studies, or reaction monitoring of two instantaneously mixed samples. The ceramic flow cell was additively manufactured and analyzed through x-ray microtomography revealing surface characteristics due to the manufacturing process (cf. Fig. 2). Furthermore, the working range of the whole system was characterized leading to an operational specification for further applications. In summary, the role of custom-designed components for modular, chemical production, amongst other essential factors like fast development of reliable evaluation models is discussed. References [1] Bornemann-Pfeiffer et al., Chem. Ing. Tech. (2021), 93: 1–10 [2] Kern et al., Anal. Bioanal. Chem. (2018) 410: 3349–3360 [3] Kern et al., Anal. Bioanal. Chem. (2019) 411: 3037–3046 [4] Bornemann et al., Ind. Eng. Chem. Res. (2019), 58: 19562−19570 T2 - EUROPACT - European Conference on Process Analytics and Control Technology CY - Online meeting DA - 15.11.2021 KW - Process analytical technology KW - NMR spectroscopy KW - Additive manufacturing KW - Computational fluid dynamics PY - 2021 AN - OPUS4-53804 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Bornemann-Pfeiffer, Martin A1 - Kern, Simon A1 - Maiwald, Michael A1 - Meyer, Klas T1 - Calibration-Free Chemical Process and Quality Control Units as Enablers for Modular Production N2 - Modular chemical production is a tangible translation of the digital transformation of the process industry for specialty chemicals. In particular, it enables the speeding-up of process development and thus a quicker time to market by flexibly connecting and orchestrating standardised physical modules and bringing them to life (i.e., parameterising them) with digitally accumulated process knowledge. We focus on the specific challenges of chemical process and quality control, which in its current form is not well suited for modular production and provide possible approaches and examples of the change towards direct analytical methods, analytical model transfer or machine-supported processes. KW - Modular Production KW - Chemical Process Control KW - Process Analytical Technology KW - Digital Transformation KW - Industry 4.0 PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-517264 DO - https://doi.org/10.1002/cite.202000150 SN - 1522-2640 VL - 93 IS - 1-2 SP - 62 EP - 70 PB - Wiley-VCH CY - Weinheim AN - OPUS4-51726 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Bornemann-Pfeiffer, Martin A1 - Meyer, Klas A1 - Lademann, J. A1 - Kraume, M. A1 - Maiwald, Michael T1 - Contributions towards variable temperature shielding for compact NMR instruments N2 - The application of compact NMR instruments to hot flowing samples or exothermically reacting mixtures is limited by the temperature sensitivity of permanent magnets. Typically, such temperature effects directly influence the achievable magnetic field homogeneity and hence measurement quality. The internal-temperature control loop of the magnet and instruments is not designed for such temperature compensation. Passive insulation is restricted by the small dimensions within the magnet borehole. Here, we present a design approach for active heat shielding with the aim of variable temperature control of NMR samples for benchtop NMR instruments using a compressed airstream which is variable in flow and temperature. Based on the system identification and surface temperature measurements through thermography, a model predictive control was set up to minimise any disturbance effect on the permanent magnet from the probe or sample temperature. This methodology will facilitate the application of variable-temperature shielding and, therefore, extend the application of compact NMR instruments to flowing sample temperatures that differ from the magnet temperature. KW - Benchtop NMR KW - Continuous Processes KW - Inline Analytics KW - Model Predictive Control KW - Process Analytical Tecnology KW - Temperature Control PY - 2023 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-579219 DO - https://doi.org/10.1002/mrc.5379 SN - 1097-458X SP - 1 EP - 10 PB - John Wiley & Sons Ltd. AN - OPUS4-57921 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Bornemann-Pfeiffer, Martin A1 - Wolf, Jakob A1 - Meyer, Klas A1 - Kern, S. A1 - Angelone, D. A1 - Leonov, A. A1 - Cronin, L. A1 - Emmerling, Franziska T1 - Standardization and control of Grignard reactions in a universal chemical synthesis machine using online NMR T1 - Standardisierung und Kontrolle von Grignard-Reaktionen mittels Online-NMR in einer universellen chemischen Syntheseplattform N2 - A big problem with the chemistry literature is that it is not standardized with respect to precise operational parameters, and real time corrections are hard to make without expert knowledge. This lack of context means difficult reproducibility because many steps are ambiguous, and hence depend on tacit knowledge. Here we present the integration of online NMR into an automated chemical synthesis machine (CSM aka. “Chemputer” which is capable of small-molecule synthesis using a universal programming language) to allow automated analysis and adjustment of reactions on the fly. The system was validated and benchmarked by using Grignard reactions which were chosen due to their importance in synthesis. The system was monitored in real time using online-NMR, and spectra were measured continuously during the reactions. This shows that the synthesis being done in the Chemputer can be dynamically controlled in response to feedback optimizing the reaction conditions according to the user requirements. N2 - Ein Problem der chemischen Literatur ist die fehlende Standardisierung bezüglich genauer Bedingungen, auch Echtzeit-Korrekturen sind ohne Expertenwissen nur schwer möglich. Dieser Mangel an Details erschwert experimentelle Reproduzierbarkeit, da Schritte oft mehrdeutig sind und daher von implizitem Wissen abhängen. Hier präsentieren wir die Integration von Online-NMR Spektroskopie in eine automatisierte chemische Syntheseplattform (CSM aka. “Chemputer”, unter Verwendung einer universellen Programmiersprache zur Synthese kleiner Moleküle fähig), um eine automatisierte Analyse und Anpassung von Reaktionen im laufenden Betrieb zu ermöglichen. Das System wurde anhand von Grignard-Reaktionen, die aufgrund ihrer Bedeutung für die Synthese ausgewählt wurden, validiert und einem Härtetest unterzogen. Synthesen wurden in Echtzeit mit Online-NMR überwacht, und die Spektren wurden während der Reaktionen kontinuierlich aufgenommen und analysiert. Dies zeigt, dass der Chemputer dynamisch mittels einer Regelung kontrolliert werden kann, um die Reaktionsbedingungen entsprechend den Anforderungen des Benutzers zu optimieren. KW - Grignard reaction KW - NMR spectroscopy KW - Process analytical technology KW - Process control KW - Grignard-Reaktion KW - NMR-Spektroskopie KW - Prozessanalytik KW - Prozesskontrolle PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-531260 DO - https://doi.org/10.1002/anie.202106323 SN - 1521-3773 SN - 1433-7851 N1 - Bibliografische Angaben für die deutsche Version: Angewandte Chemie 2021, Jg. 133, S. 1–7, ISSN 0044-8249, ISSN 1521-3757, https://doi.org/10.1002/ange.202106323 - Bibliographic information for the German version: Angewandte Chemie 2021, vol. 133, p. 1–7, ISSN 0044-8249, ISSN 1521-3757, https://doi.org/10.1002/ange.202106323 VL - 60 IS - 43 SP - 1 EP - 6 PB - Wiley-VCH CY - Weinheim AN - OPUS4-53126 LA - mul AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Bosc-Bierne, Gaby A1 - Ewald, Shireen A1 - Kreuzer, Oliver J. A1 - Weller, Michael G. T1 - Efficient Quality Control of Peptide Pools by UHPLC and Simultaneous UV and HRMS Detection N2 - Peptide pools consist of short amino acid sequences and have proven to be versatile tools in various research areas in immunology and clinical applications. They are commercially available in many different compositions and variants. However, unlike other reagents that consist of only one or a few compounds, peptide pools are highly complex products which makes their quality control a major challenge. Quantitative peptide analysis usually requires sophisticated methods, in most cases isotope-labeled standards and reference materials. Usually, this would be prohibitively laborious and expensive. Therefore, an approach is needed to provide a practical and feasible method for quality control of peptide pools. With insufficient quality control, the use of such products could lead to incorrect experimental results, worsening the well-known reproducibility crisis in the biomedical sciences. Here we propose the use of ultra-high performance liquid chromatography (UHPLC) with two detectors, a standard UV detector at 214 nm for quantitative analysis and a high-resolution mass spectrometer (HRMS) for identity confirmation. To be cost-efficient and fast, quantification and identification are performed in one chromatographic run. An optimized protocol is shown, and different peak integration methods are compared and discussed. This work was performed using a peptide pool known as CEF advanced, which consists of 32 peptides derived from cytomegalovirus (CMV), Epstein–Barr virus (EBV) and influenza virus, ranging from 8 to 12 amino acids in length. N2 - Peptidpools bestehen aus kurzen Aminosäuresequenzen und haben sich als vielseitige Werkzeuge in verschiedenen Forschungsbereichen der Immunologie und bei klinischen Anwendungen erwiesen. Sie sind in vielen verschiedenen Zusammensetzungen und Varianten im Handel erhältlich. Im Gegensatz zu anderen Reagenzien, die nur aus einer oder wenigen Verbindungen bestehen, sind Peptidpools jedoch hochkomplexe Produkte, was ihre Qualitätskontrolle zu einer großen Herausforderung macht. Die quantitative Peptidanalyse erfordert in der Regel ausgefeilte Methoden, in den meisten Fällen isotopenmarkierte Standards und Referenzmaterialien. Dies ist in der Regel sehr aufwändig und teuer. Daher wird ein Ansatz benötigt, der eine praktische und praktikable Methode zur Qualitätskontrolle von Peptidpools bietet. Bei unzureichender Qualitätskontrolle könnte die Verwendung solcher Produkte zu falschen Versuchsergebnissen führen, was das bekannte Problem der Reproduzierbarkeit in den biomedizinischen Wissenschaften noch verschärfen würde. Hier schlagen wir die Verwendung der Ultrahochleistungs-Flüssigkeitschromatographie (UHPLC) mit zwei Detektoren vor, einem Standard-UV-Detektor bei 214 nm für die quantitative Analyse und einem hochauflösenden Massenspektrometer (HRMS) für die Identitätsbestätigung. Um kosteneffizient und schnell zu sein, werden Quantifizierung und Identifizierung in einem einzigen chromatographischen Lauf durchgeführt. Es wird ein optimiertes Protokoll gezeigt, und es werden verschiedene Peak-Integrationsmethoden verglichen und diskutiert. Für diese Arbeit wurde ein Peptidpool verwendet, der als CEF advanced bekannt ist und aus 32 Peptiden besteht, die vom Cytomegalovirus (CMV), Epstein-Barr-Virus (EBV) und Influenzavirus stammen und zwischen 8 und 12 Aminosäuren lang sind. KW - Synthetic peptides KW - Quality control KW - Impurites KW - Byproducts KW - Degradation KW - Mass spectrometry KW - Orbitrap PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602299 DO - https://doi.org/10.3390/separations11050156 SN - 2297-8739 VL - 11 IS - 5 SP - 1 EP - 18 PB - MDPI CY - Basel AN - OPUS4-60229 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Bosc-Bierne, Gaby A1 - Ewald, Shireen A1 - Kreuzer, Oliver J. A1 - Weller, Michael G. T1 - Efficient Quality Control of Peptide Pools N2 - Peptide pools composed of short amino acid sequences have proven to be versatile tools in various research areas and clinical applications. They are powerful tools for epitope mapping, immunotherapy, and vaccine development. Their importance lies in their ability to map complex protein structures, enabling a comprehensive understanding of immune responses and facilitating the identification of potential therapeutic agents. The application of peptide pools also extends to the field of personalized medicine, offering tailored solutions for diseases such as cancer and infectious diseases. Peptide pools are complex mixtures of immunostimulatory antigens primarily intended for T-cell stimulation. They are commercially available in many different compositions and variants. However, unlike other reagents that consist of only one or a few compounds, peptide pools are highly complex products with limited stability. This makes their quality control a major challenge. Quantitative peptide analysis usually requires sophisticated methods, in most cases isotope-labeled standards and reference materials. None of these are routinely available for these products. Synthesis and purification of all labeled peptides might be required. Usually, this approach would be prohibitively laborious and expensive. Therefore, an approach is needed to provide a practical and feasible method for quality control of peptide pools. With insufficient quality control, the use of such products could lead to incorrect experimental results, which would worsen the well-known reproducibility crisis in the biomedical sciences. Here we propose the use of ultra-high performance liquid chromatography (UHPLC) with two detectors, a standard UV detector (at 214 nm) for quantitative analysis and a high-resolution mass spectrometer (HRMS) for identity confirmation. To be cost-efficient and fast, quantification and identification are performed in one chromatographic run. An optimized protocol is shown, and different peak integration methods are compared and discussed. This work was performed using a peptide pool known as CEF, which consists of 32 peptides derived from cytomegalovirus (CMV), Epstein-Barr virus (EBV) and influenza virus, ranging from 8 to 12 amino acids in length. N2 - Peptidpools, die aus kurzen Aminosäuresequenzen bestehen, haben sich in verschiedenen Forschungsbereichen und klinischen Anwendungen als vielseitige Werkzeuge erwiesen. Sie sind leistungsstarke Werkzeuge für die Epitopkartierung, die Immuntherapie und die Impfstoffentwicklung. Ihre Bedeutung liegt in ihrer Fähigkeit, komplexe Proteinstrukturen zu kartieren, was ein umfassendes Verständnis der Immunantworten ermöglicht und die Identifizierung potenzieller Therapeutika erleichtert. Die Anwendung von Peptidpools erstreckt sich auch auf den Bereich der personalisierten Medizin und bietet maßgeschneiderte Lösungen für Krankheiten wie Krebs und Infektionskrankheiten. Peptidpools sind komplexe Mischungen immunstimulierender Antigene, die hauptsächlich zur T-Zell-Stimulation bestimmt sind. Sie sind in vielen verschiedenen Zusammensetzungen und Varianten im Handel erhältlich. Im Gegensatz zu anderen Reagenzien, die nur aus einer oder wenigen Verbindungen bestehen, sind Peptidpools jedoch hochkomplexe Produkte mit begrenzter Stabilität. Dies macht ihre Qualitätskontrolle zu einer großen Herausforderung. Die quantitative Peptidanalyse erfordert in der Regel ausgefeilte Methoden, in den meisten Fällen isotopenmarkierte Standards und Referenzmaterialien. Keines dieser Verfahren ist für diese Produkte routinemäßig verfügbar. Möglicherweise ist die Synthese und Reinigung aller markierten Peptide erforderlich. In der Regel wäre dieser Ansatz unerschwinglich aufwendig und teuer. Daher ist ein Ansatz erforderlich, der eine praktische und praktikable Methode für die Qualitätskontrolle von Peptidpools bietet. Bei unzureichender Qualitätskontrolle könnte die Verwendung solcher Produkte zu falschen Versuchsergebnissen führen, was die bekannte Reproduzierbarkeitskrise in den biomedizinischen Wissenschaften verschlimmern würde. Hier schlagen wir die Verwendung der Ultrahochleistungsflüssigkeitschromatographie (UHPLC) mit zwei Detektoren vor, einem Standard-UV-Detektor (bei 214 nm) für die quantitative Analyse und einem hochauflösenden Massenspektrometer (HRMS) für die Identitätsbestätigung. Um kosteneffizient und schnell zu sein, werden Quantifizierung und Identifizierung in einem chromatographischen Durchlauf durchgeführt. Es wird ein optimiertes Protokoll vorgestellt und verschiedene Peak-Integrationsmethoden werden verglichen und diskutiert. Diese Arbeit wurde mit einem Peptidpool namens CEF durchgeführt, der aus 32 Peptiden besteht, die vom Cytomegalovirus (CMV), Epstein-Barr-Virus (EBV) und Influenzavirus stammen und zwischen 8 und 12 Aminosäuren lang sind. KW - Quality control KW - UHPLC-UV-HRMS KW - Relative peptide quantification KW - Compound confirmation KW - Structure confirmation KW - Cost efficiency KW - Infectious diseases KW - Orbitrap PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-621307 DO - https://doi.org/10.20944/preprints202404.0992.v1 SN - 2310-287X SP - 1 EP - 18 PB - MDPI CY - Basel AN - OPUS4-62130 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Bosc-Bierne, Gaby A1 - Weller, Michael G. T1 - Investigation of impurities in peptide pools T1 - Untersuchung von Verunreinigungen in Peptidpools N2 - Peptide pools are important research tools in different biomedical fields. They consist of a complex mixture of defined peptides, which places high demands on the production and quality control of these products. Previously it has been shown that the combination of UHPLC with high-resolution mass-spectrometry (HRMS) is a fast and powerful method to confirm the relative concentration and the structural identity of all peptides expected to be in the pool. In this work, the additional information contained in the UV chromatograms and mass spectra is used to search for impurities due to synthesis by-products and degradation during storage and transportation and to identify possible analytical artifacts. It was shown that most impurities are only present in trace amounts and can be considered uncritical for most applications. The most frequent and perhaps unexpected impurities were homo- and heterodimers caused by the free cysteines contained in these peptide pools. Furthermore, pyroglutamate and aspartimide formation, deamidation, methionine oxidation, and amino acid deletions could be found. This list is not intended to be comprehensive, but rather a brief guide to quickly identify impurities and, in the long term, to suggest possible changes in the composition of the peptide pools to avoid such impurities by design or by special precautions. N2 - Peptidpools sind wichtige Forschungsinstrumente in verschiedenen biomedizinischen Bereichen. Sie bestehen aus einer komplexen Mischung definierter Peptide, was hohe Anforderungen an die Herstellung und Qualitätskontrolle dieser Produkte stellt. In der Vergangenheit wurde gezeigt, dass die Kombination von UHPLC mit hochauflösender Massenspektrometrie (HRMS) eine schnelle und leistungsfähige Methode zur Bestätigung der relativen Konzentration und der strukturellen Identität aller Peptide ist, die in dem Pool erwartet werden. In dieser Arbeit werden die zusätzlichen Informationen, die in den UV-Chromatogrammen und Massenspektren enthalten sind, genutzt, um nach Verunreinigungen zu suchen, die auf Nebenprodukte der Synthese und den Abbau während der Lagerung und des Transports zurückzuführen sind, und um mögliche analytische Artefakte zu identifizieren. Es hat sich gezeigt, dass die meisten Verunreinigungen nur in Spuren vorhanden sind und für die meisten Anwendungen als unkritisch angesehen werden können. Die häufigsten und vielleicht unerwartetsten Verunreinigungen waren Homo- und Heterodimere, die durch die in diesen Peptidpools enthaltenen freien Cysteine verursacht werden. Außerdem wurden Pyroglutamat- und Aspartimidbildung, Deamidierung, Methioninoxidation und Aminosäuredeletionen festgestellt. Diese Liste erhebt keinen Anspruch auf Vollständigkeit, sondern ist eher ein kurzer Leitfaden, um Verunreinigungen schnell zu identifizieren und langfristig mögliche Änderungen in der Zusammensetzung der Peptidpools vorzuschlagen, um solche Verunreinigungen durch Design oder besondere Vorsichtsmaßnahmen zu vermeiden. KW - Synthetic peptides KW - Degradation KW - Synthetic artifacts KW - Peptide losses KW - Stability of peptides KW - Disulfide dimers KW - Cysteine dimers KW - Isomers KW - Cysteine alkylation PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-626987 DO - https://doi.org/10.3390/separations12020036 SN - 2297-8739 VL - 12 IS - 2 SP - 1 EP - 18 PB - MDPI AG CY - Basel AN - OPUS4-62698 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Bosc-Bierne, Gaby A1 - Weller, Michael G. T1 - Investigation of Impurities in Peptide Pools N2 - Peptide pools are important research tools in different biomedical fields. They consist of a complex mixture of defined peptides, which places high demands on the production and quality control of these products. Previously it was shown that the combination of UHPLC with high-resolution mass-spectrometry (HRMS) is a fast and powerful method to confirm the relative concentration and the structural identity of all peptides expected to be in the pool. In this work, the additional information contained in the UV chromatograms and mass spectra is used to search for impurities due to synthesis by-products, degradation during storage and transportation and to identify possible analytical artifacts. It was shown that most impurities are only present in trace amounts and can be considered uncritical for most applications. The most frequent and perhaps unexpected impurities were homo- and heterodimers caused by the free cysteines contained in these peptide pools. Furthermore, pyroglutamate and aspartimide formation, deamidation, methionine oxidation, and amino acid deletions could be found. This list is not intended to be comprehensive, but rather a brief guide to quickly identify impurities and, in the long term, to suggest possible changes in the composition of the peptide pools to avoid such impurities by design or by special precautions. N2 - Peptidpools sind wichtige Forschungswerkzeuge in verschiedenen biomedizinischen Bereichen. Sie bestehen aus einer komplexen Mischung definierter Peptide, was hohe Anforderungen an die Produktion und Qualitätskontrolle dieser Produkte stellt. Zuvor wurde gezeigt, dass die Kombination von UHPLC mit hochauflösender Massenspektrometrie (HRMS) eine schnelle und leistungsstarke Methode ist, um die relative Konzentration und die strukturelle Identität aller Peptide zu bestätigen, die im Pool erwartet werden. In dieser Arbeit werden die zusätzlichen Informationen in den UV-Chromatogrammen und Massenspektren genutzt, um nach Verunreinigungen durch Synthesenebenprodukte, Abbau während der Lagerung und des Transports zu suchen und mögliche analytische Artefakte zu identifizieren. Es wurde gezeigt, dass die meisten Verunreinigungen nur in Spuren vorhanden sind und für die meisten Anwendungen als unkritisch angesehen werden können. Die häufigsten und vielleicht unerwartetsten Verunreinigungen waren Homo- und Heterodimere, die durch die in diesen Peptidpools enthaltenen freien Cysteine verursacht wurden. Außerdem konnten Pyroglutamat- und Aspartimidbildung, Deamidierung, Methioninoxidation und Aminosäurendeletion festgestellt werden. Diese Liste erhebt keinen Anspruch auf Vollständigkeit, sondern soll vielmehr eine kurze Anleitung zur schnellen Identifizierung von Verunreinigungen und langfristig zur Anregung möglicher Änderungen in der Zusammensetzung der Peptidpools sein, um solche Verunreinigungen durch Design oder besondere Vorsichtsmaßnahmen zu vermeiden. KW - Peptides KW - Mixtures KW - Degradation KW - Rearrangement KW - Cystein-Dimers KW - Immunology KW - MHC PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-621270 DO - https://doi.org/10.20944/preprints202412.0832.v1 SP - 1 EP - 16 PB - MDPI CY - Basle, Switzerland AN - OPUS4-62127 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bothen, Nadine T1 - Site-selectivity of Phl p 5 Modifications and their Influence on the Inflammatory Potential N2 - Objective: Resolve how peroxynitrite and O3/NO2 reshape tyrosine chemistry in Phl p 5 and modulate TLR4 activation. Design: Recombinant Phl p 5 underwent defined ONOO−:Y titrations and O3/NO2 exposures. ND, HOY-D, and dityrosine cross-links were quantified; modified residues were assigned; TLR4 responses were benchmarked to native. Key results: Y285 exhibited highest susceptibility across pathways; Y236 remained unmodified. ND peaked at ONOO−:Y = 3:1 and at O3/NO2 = 10/200 ppb. The strongest hydroxylation arose with 200 ppb O3, predominating at Y112 and Y285. Cross-linking patterns diverged: ONOO− increased domain-1 connectivity while suppressing head/tail links; NO2 shifted cross-linking toward head/tail positions. Biological effect: ONOO− did not raise TLR4 activity, whereas 200 ppb O3 produced a ~6% increase. Conclusion: Phl p 5 modification is residue- and chemistry-specific. Ozone-driven hydroxylation correlates with higher TLR4 signaling, while peroxynitrite-driven nitration/cross-linking leaves TLR4 unchanged. These relationships pinpoint reactive hotspots and suggest exposure-dependent mechanisms in pollutant-enhanced allergenicity. T2 - European Aerosol Conferences (EAC) CY - Lecce, Italy DA - 31.08.2025 KW - Allergen KW - Grass pollen KW - Allergy KW - Tyrosine modification KW - Ozone KW - Nitrogen oxides KW - TLR4 KW - Inflammation PY - 2025 AN - OPUS4-64312 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Bourgon, Nicolas A1 - Oelze, Marcus A1 - Roberts, Patrick T1 - Less is more: Limiting semi-invasive sampling for multi-isotope analyses and increasing data output from single aliquot samples N2 - Developments in multi-isotope applications now enable the production of direct and precise life history data of studied archeological and paleoanthropological specimens, with analysis of tooth enamel proving particularly powerful in deep-time preservation contexts. However, the increasing amount of sample material necessary too-often compromises the specimen's structural integrity. Finding ways of minimizing semi-invasive sampling while maximizing produced data thus becomes increasingly crucial. In this study, we examine ways of optimizing sample use for state-of-the-art isotope measurements of enamel-bound zinc (δ66Zn), an increasingly used method in multi-isotope archeological research. We show that certain desolvating nebulizer introduction systems can be used to measure δ66Zn with high efficiency and accuracy using less than half the usual sample size. Moreover, we demonstrate that remaining samples subjected to typical pretreatments used for tooth enamel carbonate (δ13C and δ18O) studies can be safely used without alterations to δ66Zn values. Similarly, we highlight that the often-discarded matrix fraction from zinc chromatography can be utilized for further analyses, such as measurements of 87Sr/86Sr ratios. Our results underscore the possibility of extracting the maximum information from specimens while altogether avoiding or significantly reducing semi-invasive sampling. KW - Multi-isotope KW - Zinc isotope analysis KW - Tooth enamel PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-637986 DO - https://doi.org/10.1016/j.jas.2025.106308 SN - 0305-4403 VL - 180 SP - 1 EP - 8 PB - Elsevier Ltd. AN - OPUS4-63798 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Boyraz, B. A1 - Saatz, Jessica A1 - Pompös, I.-M. A1 - Gad, Michel A1 - Dernedde, J. A1 - Maier, A.-M. B. A1 - Moscovitz, O. A1 - Seeberger, P. H. A1 - Traub, Heike A1 - Tauber, R. T1 - Imaging Keratan Sulfate in Ocular Tissue Sections by Immunofluorescence Microscopy and LA-ICP-MS N2 - Carbohydrate-specific antibodies can serve as valuable tools to monitor alterations in the extracellular matrix resulting from pathologies. Here, the keratan sulfate-specific monoclonal antibody MZ15 was characterized in more detail by immunofluorescence microscopy as well as laser ablation ICP-MS using tissue cryosections and paraffin-embedded samples. Pretreatment with keratanase II prevented staining of samples and therefore demonstrated efficient enzymatic keratan sulfate degradation. Random fluorescent labeling and site-directed introduction of a metal cage into MZ15 were successful and allowed for a highly sensitive detection of the keratan sulfate landscape in the corneal stroma from rats and human tissue. KW - Laser ablation KW - Imaging KW - Glycosaminoglycan KW - ICP-MS KW - Immunohistochemistry KW - Immunofluorescence KW - Tissue PY - 2022 DO - https://doi.org/10.1021/acsabm.1c01240 VL - 5 IS - 2 SP - 853 EP - 861 PB - American Chemical Society CY - Washington AN - OPUS4-54341 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Brangsch, J. A1 - Reimann, C. A1 - Kaufmann, Jan Ole A1 - Adams, L. C. A1 - Onthank, D. A1 - Thöne-Reineke, C. A1 - Robinson, S. A1 - Ponader, Marco A1 - Weller, Michael G. A1 - Buchholz, R. A1 - Karst, U. A1 - Botnar, R. A1 - Hamm, B. A1 - Makowski, M. R. T1 - Molecular MR-Imaging for Noninvasive Quantification of the Anti-Inflammatory Effect of Targeting Interleukin-1β in a Mouse Model of Aortic Aneurysm N2 - Background: Molecular-MRI is a promising imaging modality for the assessment of abdominal aortic aneurysms (AAAs). Interleukin-1β (IL-1β) represents a new therapeutic tool for AAA-treatment, since pro-inflammatory cytokines are key-mediators of inflammation. This study investigates the potential of molecular-MRI to evaluate therapeutic effects of an anti-IL-1β-therapy on AAA-formation in a mouse-model. Methods: Osmotic-minipumps were implanted in apolipoprotein-deficient-mice (N = 27). One group (Ang-II+01BSUR group, n = 9) was infused with angiotensin-II (Ang-II) for 4 weeks and received an anti-murine IL-1β-antibody (01BSUR) 3 times. One group (Ang-II-group, n = 9) was infused with Ang-II for 4 weeks but received no treatment. Control-group (n = 9) was infused with saline and received no treatment. MR-imaging was performed using an elastin-specific gadolinium-based-probe (0.2 mmol/kg). Results: Mice of the Ang-II+01BSUR-group showed a lower aortic-diameter compared to mice of the Ang-II-group and control mice (p < 0.05). Using the elastin-specific-probe, a significant decrease in elastin-destruction was observed in mice of the Ang-II+01BSUR-group. In vivo MR-measurements correlated well with histopathology (y = 0.34x-13.81, R2 = 0.84, p < 0.05), ICP-MS (y = 0.02x+2.39; R2 = 0.81, p < 0.05) and LA-ICP-MS. Immunofluorescence and western-blotting confirmed a reduced IL-1β-expression. Conclusions: Molecular-MRI enables the early visualization and quantification of the anti-inflammatory-effects of an IL-1β-inhibitor in a mouse-model of AAAs. Responders and non-responders could be identified early after the initiation of the therapy using molecular-MRI. KW - Cardiovascular KW - Molecular-MRI KW - Magnetic resonance imaging KW - Gadolinium-based contrast agent KW - Elastin-specific contrast agent ESMA KW - Gadovist KW - Gadofosveset KW - MR Angiography KW - Inductively Coupled Mass Spectroscopy KW - Element Specific Bioimaging Using Laser Ablation KW - Visualization PY - 2020 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-517150 DO - https://doi.org/10.1177/1536012120961875 N1 - Geburtsname von Ponader, Marco: Wilke, M. - Birth name of Ponader, Marco: Wilke, M. VL - 19 SP - 61875 PB - SAGE AN - OPUS4-51715 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Brasse, Y. T1 - Delivery of macromolecular drugs via coated silica particles N2 - Modified silica particles are of great interest in biomedical applications, since they can be used e.g. as drug carriers, fluorescent sensors, or multimodal labels in bioimaging. Here we present novel approaches for drug labeled and loaded silica nanoparticles. T2 - NanoMedicine International Conference 2021 CY - Milan, Italy DA - 20.10.2021 KW - Silica nanoparticles KW - Drug delivery KW - Particle modification KW - Cell studies PY - 2021 AN - OPUS4-57728 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Brauckmann, C. A1 - Pramann, A. A1 - Rienitz, O. A1 - Schulze, A. A1 - Phukphatthanachai, P. A1 - Vogl, Jochen T1 - Combining Isotope Dilution and Standard Addition - Elemental Analysis in Complex Samples N2 - A new method combining isotope dilution mass spectrometry (IDMS) and standard addition has been developed to determine the mass fractions w of different elements in complex matrices: (a) silicon in aqueous tetramethylammonium hydroxide (TMAH), (b) sulfur in biodiesel fuel, and (c) iron bound to transferrin in human serum. All measurements were carried out using inductively coupled plasma mass spectrometry (ICP–MS). The method requires the gravimetric preparation of several blends (bi)—each consisting of roughly the same masses (mx,i) of the sample solution (x) and my,i of a spike solution (y) plus different masses (mz,i) of a reference solution (z). Only these masses and the isotope ratios (Rb,i) in the blends and reference and spike solutions have to be measured. The derivation of the underlying equations based on linear regression is presented and compared to a related concept reported by Pagliano and Meija. The uncertainties achievable, e.g., in the case of the Si blank in extremely pure TMAH of urel (w(Si)) = 90% (linear regression method, this work) and urel (w(Si)) = 150% (the method reported by Pagliano and Meija) seem to suggest better applicability of the new method in practical use due to the higher robustness of regression analysis. T2 - CITAC Best Paper Award Ceremony CY - Online meeting DA - 21.06.2022 KW - Isotope dilution mass spectrometry KW - Standard addition KW - ICP-MS KW - Blank characterization KW - Silicon KW - Sulfur KW - Transferrin KW - Tetramethylammonium hydroxide KW - Biodiesel fuel KW - Human serum PY - 2022 AN - OPUS4-55032 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Brauckmann, C. A1 - Pramann, A. A1 - Rienitz, O. A1 - Schulze, A. A1 - Phukphatthanachai, Pranee A1 - Vogl, Jochen T1 - Combining Isotope Dilution and Standard Addition—Elemental Analysis in Complex Samples N2 - A new method combining isotope dilution mass spectrometry (IDMS) and standard addition has been developed to determine the mass fractions w of different elements in complex matrices: (a) silicon in aqueous tetramethylammonium hydroxide (TMAH), (b) sulfur in biodiesel fuel, and (c) iron bound to transferrin in human serum. All measurements were carried out using inductively coupled plasma mass spectrometry (ICP–MS). The method requires the gravimetric preparation of several blends (bi)—each consisting of roughly the same masses (mx,i) of the sample solution (x) and my,i of a spike solution (y) plus different masses (mz,i) of a reference solution (z). Only these masses and the isotope ratios (Rb,i) in the blends and reference and spike solutions have to be measured. The derivation of the underlying equations based on linear regression is presented and compared to a related concept reported by Pagliano and Meija. The uncertainties achievable, e.g., in the case of the Si blank in extremely pure TMAH of urel (w(Si)) = 90% (linear regression method, this work) and urel (w(Si)) = 150% (the method reported by Pagliano and Meija) seem to suggest better applicability of the new method in practical use due to the higher robustness of regression analysis. KW - Isotope dilution mass spectrometry KW - tandard addition KW - ICP-MS KW - lank characterization KW - Silicon KW - Sulfur KW - Transferrin KW - Tetramethylammonium hydroxide KW - Biodiesel fuel KW - Human serum PY - 2021 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-526376 DO - https://doi.org/10.3390/molecules26092649 VL - 26 IS - 9 SP - 2649 PB - MDPI CY - Basel AN - OPUS4-52637 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Braun, Jennifer A1 - Engelhard, Carsten A1 - Kaul, Peter T1 - Optimized fast gas chromatography coupled with proton-transfer-reaction time-of-flight mass spectrometry for the selective near real-time analysis of herbivore-induced plant volatiles N2 - The analysis of herbivore-induced plant volatiles (HIPVs) is essential for understanding plant-environment interactions and defense strategies against herbivores. Proton transfer reaction time-of-flight mass spectrometry (PTR–TOF–MS) is a powerful analytical tool that enables real-time monitoring and quantification of diverse groups of HIPVs. However, the PTR–TOF–MS technique is constrained in its ability to effectively differentiate between isomers. When analyzing complex mixtures of HIPVs, the separation of isomers becomes crucial as major compound classes such as terpenes comprise thousands of isomers. In this study, we present an optimized fast gas chromatography (fastGC) based on a modified version of the commercially available fastGC add-on integrated into a mobile PTR–TOF. The system was optimized for the analysis of emissions from enclosed trunks of Acer platanoides infested by Anoplophora glabripennis (Motschulsky), commonly known as Asian longhorned beetle (ALB). The development of fastGC was primarily focused on the sesquiterpenes α-longipinene, cyclosativene and α-copaene, which serve as strong indicators of ALB infestation. These sesquiterpenes were separated in less than three minutes, with intra-day retention time RSD < 0.6 % and resolutions of 2.6 ± 0.3 and 1.3 ± 0.2. In comparison to the original system, the optimized fastGC demonstrates more than tripled sesquiterpene resolution, twice the sensitivity relative to direct inlet mode, and an approximately 10 % reduction in total analysis time. The optimized fastGC–PTR–TOF allows for near real-time analysis of complex mixtures of biogenic VOCs, making it a powerful tool for environmental monitoring, integrated pest management, and forest protection. KW - Mass Spectrometry KW - PTR-TOF-MS KW - Gas Chromatography KW - Herbivore-induced plant volatiles KW - Sesquiterpenes PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-639513 DO - https://doi.org/10.1016/j.chroma.2025.466236 SN - 0021-9673 VL - 1759 SP - 1 EP - 16 PB - Elsevier B.V. AN - OPUS4-63951 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Braun, Ulrike T1 - Von der Kläranlage in das Labor N2 - Im Vorhaben „MARKERIA - Bestimmung von anthropogenen Markerkonzentrationen für die SARS-CoV-2 Quantifizierung mittels eines Hochdurchsatzverfahrens (ELISA)“ geht es um die Bestimmung von Carbamazepin, Diclofenac, Koffein und einer endogenen Gallensäure als potentielle Marker für die Kalibrierung der SARS-CoV-2 Quantifizierung im Abwasser. Es ist ein Teilvorhaben des übergeordneten Projektes ESI-CorA und wird von der BAM im Auftrag des Umweltbundesamtes durchgeführt. Der Vortrag wurde gehalten im Rahmen der Abschlussveranstaltung des Projektes ESI-CorA. Er gab den Projektstand wieder, den UBA und BAM bis dahin erzielt hatten, das SARS-CoV-2 Virus und die anthropogenen Marker in 20 Kläranlagenzuläufen zu bestimmen und miteinander zu korrelieren. T2 - Abschlussveranstaltung des EU-Projekts ESI-CorA CY - Karlsruhe, Germany DA - 22.03.2023 KW - Wastewater-based epidemiology KW - Abwasser KW - ELISA KW - Coronavirus KW - COVID-19 PY - 2023 AN - OPUS4-59204 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Braymer, Joseph T1 - Cytosolic Fe/S Protein Biogenesis -a new [2Fe-2S] protein- N2 - Iron-Sulfur (Fe/S) protein biogenesis in the cytosol is an essential process for the proper maturation of many proteins and enzymes required for cellular function. Between the two types of Fe/S cofactors, recent work has been uncovering the dependencies of [2Fe-2S] cluster on the known Fe/S protein biogenesis machineries and how they may be trafficked in the cytosol. New insights will here be discussed in addition to the discovery of a newly identified cytosolic [2Fe-2S] binding protein. T2 - Invited talk at University of Potsdam, Institute of Biochemistry and Biology CY - Potsdam, Germany DA - 29.11.2024 KW - Metalloproteins KW - Iron-sulfur clusters PY - 2024 AN - OPUS4-62144 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Braymer, Joseph T1 - Methanobacterium IM1 as a model organism to study MIC N2 - Microbiologically influenced corrosion (MIC), also known as biocorrosion, is a process where microbes corrode metal surfaces causing detrimental damage to manmade infrastructure. Several studies, mainly under anaerobic conditions, have identified sulfate-reducing bacteria and methanogens as key players in biocorrosion. However, an important issue is that most MIC-related microbes at the moment are non-culturable. In addition, improved technologies (i.e., omics, biochemical, and microscopy methods) are needed to study, detect, simulate, and modulate MIC-related cases. Therefore, the selection of strains that can cause MIC, are culturable, and are genetically accessible, are of high importance for establishing new methods to study MIC on the molecular level. For example, the archaeal strain Methanobacterium IM1 has caught great attention due to its involvement in biocorrosion processes. Genes encoding for a novel enzyme (MIC NiFe-hydrogenase) have been proposed in this methanogen to be directly related to the e T2 - International Biodeterioration and Biodegradation Symposium 19 CY - Berlin, Germany DA - 11.09.2024 KW - Biocorrosion KW - Methanogen KW - Iron KW - Hydrogenase KW - Mechanism PY - 2024 AN - OPUS4-61508 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Braymer, Joseph T1 - Yeast [FeFe]-hydrogenase-like protein Nar1 binds a [2Fe-2S] cluster N2 - Iron-sulfur (Fe/S) clusters are essential cofactors in many cellular processes and their synthesis as well as insertion into proteins must be tightly orchestrated. Nar1 is an essential eukaryotic protein proposed to function as an Fe/S cluster trafficking factor in the cytosolic iron-sulfur assembly (CIA) pathway. However, such a role has remained unclear due to difficulties in purifying adequate amounts of cofactor-bound protein. The [FeFe]-hydrogenase-like protein has two conserved binding sites for [4Fe-4S] clusters but does not show hydrogenase activity in vivo due to the lack of an active site [2Fe]H cofactor. In the presentation, I will discuss a new preparation procedure for Nar1 that facilitated studies by UV-Vis, EPR, and Mössbauer spectroscopies, along with native mass spectrometry (1). Nar1 recombinantly produced in E. coli contained a [4Fe-4S] cluster, bound presumably at site 1, along with an unexpected [2Fe-2S] cluster bound at an unknown site. Fe/S reconstitution reactions installed a second [4Fe-4S] cluster at site 2, leading to protein with up to three Fe/S cofactors. It is proposed that the [2Fe-2S] cluster occupies a cavity in Nar1 that is filled by the [2Fe]H cofactor in [FeFe]-hydrogenases. Strikingly, two of the Fe/S clusters were rapidly destroyed by molecular oxygen, linking Nar1 oxygen sensitivity in vitro to phenotypes observed previously in vivo. Our biochemical results, therefore, validate a direct link between cellular oxygen concentrations and the functioning of the CIA pathway via Nar1. How these results impact our understanding of the biogenesis of Fe/S proteins will be discussed. T2 - Advances in Structural Analysis of Biomolecules CY - Berlin, Germany DA - 23.10.2025 KW - Biocorrosion KW - Hydrogenases KW - Metalloprotein KW - Microbes PY - 2025 AN - OPUS4-64491 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Braymer, Joseph J. T1 - Cytosolic Fe/S Protein Biogenesis -a focus on [2Fe-2S] proteins- N2 - Iron-Sulfur (Fe/S) protein biogenesis in the cytosol is an essential process for the proper maturation of many proteins and enzymes required for cellular function. Between the two types of Fe/S cofactors, recent work has been uncovering the dependencies of [2Fe-2S] cluster on the known Fe/S protein biogenesis machineries and how they may be trafficked in the cytosol. New insights will here be discussed in addition to the discovery of a newly identified cytosolic [2Fe-2S] binding protein. T2 - DFG SPP1927 Final Meeting CY - Potsdam, Germany DA - 29.09.2024 KW - Metalloproteins KW - Iron-sulfur clusters KW - Spectroscopy KW - Yeast PY - 2024 AN - OPUS4-61516 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - INPR A1 - Braymer, Joseph J. A1 - Knauer, L. A1 - Crack, J. C. A1 - Oltmanns, J. A1 - Heghmanns, M. A1 - Soares, J. C. A1 - Le Brun, N. E. A1 - Schünemann, V. A1 - Kasanmascheff, M. T1 - Yeast [FeFe]-hydrogenase-like protein Nar1 can bind not only two [4Fe-4S] clusters but also a [2Fe-2S] cluster N2 - Nar1 is an essential eukaryotic protein proposed to function as an iron-sulfur (Fe/S) cluster trafficking factor in the cytosolic iron-sulfur assembly (CIA) machinery. However, such a role has remained unclear due to difficulties in purifying adequate amounts of cofactor-bound protein. The [FeFe]-hydrogenase-like protein has two conserved binding sites for [4Fe-4S] clusters, one of which is predicted to be a labile site for cluster transfer to downstream targets. Here, we report a new preparation procedure for Nar1 that facilitated studies by UV-Vis, EPR, and Mössbauer spectroscopies, along with native mass spectrometry. Nar1 recombinantly produced in E. coli contained a [4Fe-4S] cluster, bound presumably at site 1, along with an unexpected [2Fe-2S] cluster bound at an unknown site. Fe/S reconstitution reactions installed a second [4Fe-4S] cluster at site 2, leading to protein with three Fe/S cofactors. Strikingly, one [4Fe-4S] cluster was rapidly destroyed by molecular oxygen, potentially linking Nar1 oxygen sensitivity to phenotypes observed previously in vivo. These advances now allow for the pursuit of in vitro Fe/S cluster transfer assays, which will shed light on Fe/S trafficking by CIA components and how they may facilitate the insertion of [4Fe-4S] and potentially [2Fe-2S] clusters into target proteins in the cytosol. KW - Iron sulfur cluster KW - Hydrogenase-like proteins KW - Metalloprotein PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-628217 DO - https://doi.org/10.1101/2025.03.25.644927 SP - 1 EP - 14 AN - OPUS4-62821 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Braymer, Joseph J. A1 - Knauer, Lukas A1 - Crack, Jason C. A1 - Oltmanns, Jonathan A1 - Heghmanns, Melanie A1 - Soares, Jéssica C. A1 - Le Brun, Nick E. A1 - Schünemann, Volker A1 - Kasanmascheff, Müge T1 - Yeast [FeFe]-hydrogenase-like protein Nar1 binds a [2Fe–2S] cluster N2 - Nar1 is an essential eukaryotic protein proposed to function as an iron–sulphur (Fe/S) cluster trafficking factor in the cytosolic iron–sulphur protein assembly (CIA) machinery. However, such a role has remained unclear due to difficulties in purifying adequate amounts of cofactor-bound protein. The [FeFe]-hydrogenase-like protein has two conserved binding sites for [4Fe–4S] clusters but does not show hydrogenase activity in vivo due to the lack of an active site [2Fe]H cofactor. Here, we report a new preparation procedure for Nar1 that facilitated studies by UV-vis, EPR, and Mössbauer spectroscopies, along with native mass spectrometry. Nar1 recombinantly produced in E. coli contained a [4Fe–4S] cluster, bound presumably at site 1, along with an unexpected [2Fe–2S] cluster bound at an unknown site. Fe/S reconstitution reactions installed a second [4Fe–4S] cluster at site 2, leading to protein with up to three Fe/S cofactors. It is proposed that the [2Fe–2S] cluster occupies a cavity in Nar1 that is filled by the [2Fe]H cofactor in [FeFe]-hydrogenases. Strikingly, two of the Fe/S clusters were rapidly destroyed by molecular oxygen, linking Nar1 oxygen sensitivity in vitro to phenotypes observed previously in vivo. Our biochemical results, therefore, validate a direct link between cellular oxygen concentrations and the functioning of the CIA pathway. These advances also now allow for the pursuit of in vitro Fe/S cluster transfer assays, which will shed light on Fe/S trafficking and insertion by CIA components. KW - Biocorrosion KW - Hydrogenases KW - Metalloprotein KW - Yeast PY - 2025 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-649463 DO - https://doi.org/10.1039/D5SC04860E SN - 2041-6520 VL - 17 IS - 1 SP - 373 EP - 380 PB - Royal Society of Chemistry (RSC) AN - OPUS4-64946 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Braymer, Joseph J. A1 - Stehling, Oliver A1 - Stümpfig, Martin A1 - Rösser, Ralf A1 - Spantgar, Farah A1 - Blinn, Catharina M. A1 - Mühlenhoff, Ulrich A1 - Pierik, Antonio J. A1 - Lill, Roland T1 - Requirements for the biogenesis of [2Fe-2S] proteins in the human and yeast cytosol N2 - The biogenesis of iron–sulfur (Fe/S) proteins entails the synthesis and trafficking of Fe/S clusters, followed by their insertion into target apoproteins. In eukaryotes, the multiple steps of biogenesis are accomplished by complex protein machineries in both mitochondria and cytosol. The underlying biochemical pathways have been elucidated over the past decades, yet the mechanisms of cytosolic [2Fe-2S] protein assembly have remained ill-defined. Similarly, the precise site of glutathione (GSH) requirement in cytosolic and nuclear Fe/S protein biogenesis is unclear, as is the molecular role of the GSH-dependent cytosolic monothiol glutaredoxins (cGrxs). Here, we investigated these questions in human and yeast cells by various in vivo approaches. [2Fe-2S] cluster assembly of cytosolic target apoproteins required the mitochondrial ISC machinery, the mitochondrial transporter Atm1/ABCB7 and GSH, yet occurred independently of both the CIA system and cGrxs. This mechanism was strikingly different from the ISC-, Atm1/ABCB7-, GSH-, and CIA-dependent assembly of cytosolic–nuclear [4Fe-4S] proteins. One notable exception to this cytosolic [2Fe-2S] protein maturation pathway defined here was yeast Apd1 which used the CIA system via binding to the CIA targeting complex through its C-terminal tryptophan. cGrxs, although attributed as [2Fe-2S] cluster chaperones or trafficking proteins, were not essential in vivo for delivering [2Fe-2S] clusters to either CIA components or target apoproteins. Finally, the most critical GSH requirement was assigned to Atm1-dependent export, i.e. a step before GSH-dependent cGrxs function. Our findings extend the general model of eukaryotic Fe/S protein biogenesis by adding the molecular requirements for cytosolic [2Fe-2S] protein maturation. KW - Biokorrosion KW - Hydrogenasen KW - Microbially Induced Corrosion PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-602328 DO - https://doi.org/10.1073/pnas.2400740121 SN - 0027-8424 VL - 121 IS - 21 SP - 1 EP - 12 PB - Proceedings of the National Academy of Sciences CY - Washington D.C. AN - OPUS4-60232 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CHAP A1 - Braymer, Joseph A1 - Pierik, Antonio ED - Leimkühler, Silke ED - Schwarz, Günter ED - Lenz, Oliver ED - Einsle, Oliver T1 - Chapter 4: Iron–Sulfur Protein Maturation in the Cytosol of Eukaryotes N2 - Cytosolic and nuclear proteins that bind iron–sulfur (Fe/S) clusters play essential roles in various eukaryotic cellular processes. Studies in yeast and human models have detailed the biogenesis requirements for [2Fe–2S] and [4Fe–4S] cytosolic proteins. Both types of Fe/S clusters require the mitochondrial Fe/S cluster pathway (ISC), the mitochondrial transporterAtm1, and the presence of glutathione, whereas [4Fe–4S] clusters are further strictly dependent on the conserved cytosolic Fe/S cluster assembly (CIA) pathway. Here, we outline the general requirements for cytosolic Fe/S protein biogenesis and the challenges in assigning cytosolic Fe/S proteins and briefly discuss the relevance to disease and for biotechnology. KW - Biocorrosion KW - Hydrogenases KW - Metalloprotein KW - Iron-sulfur clusters KW - Microbes PY - 2025 UR - https://www.wiley-vch.de/de?option=com_eshop&view=product&isbn=9783527352555 SN - 978-3-527-35255-5 SP - 1 EP - 49 PB - Wiley VHC-Verlag ET - 1 AN - OPUS4-64497 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bresch, Harald T1 - Anwendungen von maschinellem Lernen und KI an der BAM N2 - Im Austausch mit den anderen Bundesoberbehörden wurden die KI-Ansätze der verschiedenen Bundesoberbehörden zu spezifischen Themen der Nanowissenschaften präsentiert. Der Vortrag der BAM fokusiert sich auf die Themen "Self driving lab", semantische Segmentierung und Auswertung von elektronenmikroskopischen Bildern sowie die Generierung von ausführbaren Machineninstruktionen aus natürlicher Sprache. Abschließend wird der neue BAM DataStore vorgestellt. T2 - Nano-Behördenklausur 2024 CY - Berlin, Germany DA - 03.07.02024 KW - Nano KW - Bundesoberbehörden KW - Künstliche Intelligenz KW - Neuronale Netzwerke KW - Elektronisches Laborbuch PY - 2024 AN - OPUS4-61819 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - CONF A1 - Bresch, Harald T1 - Tour de table - BAM N2 - Kurzübersicht über die neuen Aktivitäten zu Nanomaterialien in 2021. T2 - Nano-Behördenklausur der Bundesoberbehörden 2021 CY - Online meeting DA - 17.11.2021 KW - Nano KW - Nanomaterial KW - Nanopartikel KW - Bundesoberbehörden PY - 2021 AN - OPUS4-53827 LA - deu AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Breuninger, Esther S. A1 - Tolu, Julie A1 - Aemisegger, Franziska A1 - Thurnherr, Iris A1 - Bouchet, Sylvain A1 - Mestrot, Adrien A1 - Ossola, Rachele A1 - McNeill, Kristopher A1 - Tukhmetova, Dariya A1 - Vogl, Jochen A1 - Meermann, Björn A1 - Sonke, Jeroen E. A1 - Winkel, Lenny H. E. T1 - Marine and terrestrial contributions to atmospheric deposition fluxes of methylated arsenic species N2 - Arsenic, a toxic element from both anthropogenic and natural sources, reaches surface environments through atmospheric cycling and dry and wet deposition. Biomethylation volatilizes arsenic into the atmosphere and deposition cycles it back to the surface, affecting soil-plant systems. Chemical speciation of deposited arsenic is important for understanding further processing in soils and bioavailability. However, the range of atmospheric transport and source signature of arsenic species remain understudied. Here we report significant levels ofmethylated arsenic in precipitation, cloudwater and aerosols collected under free tropospheric conditions at Pic du Midi Observatory (France) indicating long-range transport, which is crucial for atmospheric budgets. Through chemical analyses andmoisture source diagnostics, we identify terrestrial and marine sources for distinct arsenic species. Estimated atmospheric deposition fluxes of methylated arsenic are similar to reported methylation rates in soils, highlighting atmospheric deposition as a significant, overlooked source of potentially bioavailable methylated arsenic species impacting plant uptake in soils. KW - Arsenic KW - Speciation KW - Fluxes KW - Marine KW - Terrestrial KW - Sulfur isotopes PY - 2024 UR - https://nbn-resolving.org/urn:nbn:de:kobv:b43-615551 DO - https://doi.org/10.1038/s41467-024-53974-z SN - 2041-1723 VL - 15 IS - 1 SP - 1 EP - 13 PB - Springer Science and Business Media LLC AN - OPUS4-61555 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -