TY - JOUR A1 - Rackwitz, J. A1 - Rankovic, M. A1 - Milosavljevic, A. A1 - Bald, Ilko T1 - A novel setup for the determination of absolute cross sections for low-energy electron induced strand breaks in oligonucleotides – The effect of the radiosensitizer 5-fluorouracil JF - European Physical Journal D N2 - Low-energy electrons (LEEs) play an important role in DNA radiation damage. Here we present a method to quantify LEE induced strand breakage in well-defined oligonucleotide single strands in terms of absolute cross sections. An LEE irradiation setup covering electron energies <500 eV is constructed and optimized to irradiate DNA origami triangles carrying well-defined oligonucleotide target strands. Measurements are presented for 10.0 and 5.5 eV for different oligonucleotide targets. The determination of absolute strand break cross sections is performed by atomic force microscopy analysis. An accurate fluence determination ensures small margins of error of the determined absolute single strand break cross sections σSSB. In this way, the influence of sequence modification with the radiosensitive 5-Fluorouracil (5FU) is studied using an absolute and relative data analysis. We demonstrate an increase in the strand break yields of 5FU containing oligonucleotides by a factor of 1.5 to 1.6 compared with non-modified oligonucleotide sequences when irradiated with 10 eV electrons. KW - DNA origami KW - DNA radiation damage KW - Radiosensitizer KW - AFM KW - Fluorouracil PY - 2017 UR - http://epjd.epj.org/articles/epjd/abs/2017/02/d160608/d160608.html DO - https://doi.org/10.1140/epjd/e2016-70608-4 VL - 71 SP - 32 PB - Springer CY - New York, NY, USA AN - OPUS4-39643 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER - TY - JOUR A1 - Risinggård, H. K. A1 - Cooil, S. A1 - Mazzola, F. A1 - Hu, D. A1 - Kjaervik, Marit A1 - Østli, E. R. A1 - Patil, N. A1 - Preobrajenski, A. A1 - Ewans, A. D. A1 - Breiby, D. W. A1 - Trinh, T. T. A1 - Wells, J. W. T1 - Degradation of the chemotherapy drug 5-fluorouracil on medical-grade silver surfaces JF - Applied Surface Science N2 - The degradation of the chemotherapy drug 5-fluorouracil by a non-pristine metal surfaces is studied.Using density functional theory, X-ray photoelectron spectroscopy and X-ray absorption spectroscopy we show that the drug is entirely degraded by medical-grade silver surfaces, already at body temperature,and that all of the fluorine has left the molecule, presumably as HF. Remarkably, this degradation is even more severe than that reported previously for 5-fluorouracil on a pristine monocrystalline silver surface(in which case 80% of the drug reacted at body temperature) [1]. We conclude that the observed reaction is due to a reaction pathway, driven by H to F attraction between molecules on the surface, which results in the direct formation of HF; a pathway which is favoured when competing pathways involving reactive Ag surface sites are made unavailable by environmental contamination. Our measurements indicate that realistically cleaned, non-pristine silver alloys, which are typically used in medical applications, can result in severe degradation of 5-fluorouracil, with the release of HF – a finding which may have important implications for the handling of chemotherapy drugs. KW - Surface science KW - Chemotherapy KW - DFT KW - Photoemission KW - Fluorouracil KW - Silver PY - 2018 DO - https://doi.org/10.1016/j.apsusc.2017.11.221 SN - 0169-4332 VL - 435 SP - 1213 EP - 1219 PB - Elsevier CY - Amsterdam, The Netherlands AN - OPUS4-43450 LA - eng AD - Bundesanstalt fuer Materialforschung und -pruefung (BAM), Berlin, Germany ER -